Pregenerated sensors for SGF29 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030714Ensembl transcript IDs: ENSMUST00000032956.10, ENSMUST00000205507.2, ENSMUST00000206359.2
Found 60 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AAGATAAACTGTATTTTACCTGAACAAATAAATGCCACTGGGAGCTaGCTGGACCTTCTCCCTCTTGCGACCATCAATCCCACGTGCCTG | + |
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Preference number: 1 (lower is better) Translates to: KINCILPEQINATGS*LDLLPLATINPTCL Trigger: CAGGCACGTGGGATTGATGGTCGCAAGAGGGAGAAGGTCCAGTCAGCTCCCAGTGGCATTTATTTGTTCAGGTAAAATACAGTTTATCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032956.10 |
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| 3UTR-3UTR TCA 90 bp | TCTCCCTCTTGCGACCATCAATCCCACGTGCCTGATGGAGGATGGCAAGAGGGTTGTAGCCTTCTCCCATaGGGTTGGCAGTGGCAGATT | + |
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Preference number: 2 (lower is better) Translates to: SPSCDHQSHVPDGGWQEGCSLLP*GWQWQI Trigger: AATCTGCCACTGCCAACCTCATGGGAGAAGGCTACA...ACCCTCTTGCCATCCTCCATCAGGCACGTGGGATTGATGGTCGCAAGAGGGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032956.10 |
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| 3UTR-3UTR TCA 90 bp | CTGGACCTTCTCCCTCTTGCGACCATCAATCCCACGTGCCTGATGGAGGATGGCGCCCAGGAGACATGGTaGGAGGGAAGAGTATTTATT | + |
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Preference number: 2 (lower is better) Translates to: LDLLPLATINPTCLMEDGAQETW*EGRVFI Trigger: AATAAATACTCTTCCCTCTCACCATGTCTCCTGGGC...GCCATCCTCCATCAGGCACGTGGGATTGATGGTCGCAAGAGGGAGAAGGTCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032956.10 |
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| 3UTR TCA 72 bp | ACCTTCTCCCTCTTGCGACCATCAATCCCACGTGCCTaGTGGAGGATGGCAAGAGGGTCTGACGTAGTGAGG | + |
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Preference number: 3 (lower is better) Translates to: TFSLLRPSIPRA*WRMARGSDVVR Trigger: CCTCACTACGTCAGACCCTCTTGCCATCCTCCATCAGGCACGTGGGATTGATGGTCGCAAGAGGGAGAAGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032956.10 |
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| 3UTR TCA 72 bp | TGTATTTTACCTGAACAAATAAATGCCACTGGGAGCTaGCTGGACCTTCTCCCTCTTGCGACCATCAATCCC | + |
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Preference number: 3 (lower is better) Translates to: CILPEQINATGS*LDLLPLATINP Trigger: GGGATTGATGGTCGCAAGAGGGAGAAGGTCCAGTCAGCTCCCAGTGGCATTTATTTGTTCAGGTAAAATACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032956.10 |
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| CDS-3UTR CCA 90 bp | AGGGTTAGCTTTCCACTGGGGCAGTGGGATGATGCGCCGACGGCTCAGGGTGTGCCTCCGCATCAGTCTTaGCGGTTGTGTAGAGGCCTC | + |
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Preference number: 4 (lower is better) Translates to: RVSFPLGQWDDAPTAQGVPPHQS*RLCRGL Trigger: GAGGCCTCTACACAACCGCCAAGACTGATGCGGAGG...CACACCCTGAGCCGTCGGCGCATCATCCCACTGCCCCAGTGGAAAGCTAACCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000205507.2 ENSMUST00000206359.2 |
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| CDS-3UTR CCA 90 bp | TGCCACTGGGAGCTGACTGGACCTTCTCCCTCTTGCGACCATCAATCCCACGTGGCCACCACGTACCTCTaGGCCACATTGAGGGGAGGG | + |
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Preference number: 4 (lower is better) Translates to: CHWELTGPSPSCDHQSHVATTYL*ATLRGG Trigger: CCCTCCCCTCAATGTGGCCCAGAGGTACGTGGTGGC...CACGTGGGATTGATGGTCGCAAGAGGGAGAAGGTCCAGTCAGCTCCCAGTGGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032956.10 |
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| CDS-3UTR TCA 90 bp | GGCAGTGGGATGATGCGCCGACGGCTCAGGGTGTGTCTCTCTTTGCCTTCTTCAGGCCACATAGTCCCCTaGGGCTGGAATGGCTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: GSGMMRRRLRVCLSLPSSGHIVP*GWNGST Trigger: TGTGGAGCCATTCCAGCCTCAGGGGACTATGTGGCC...TGAAGAAGGCAAAGAGAGACACACCCTGAGCCGTCGGCGCATCATCCCACTGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205507.2 |
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| CDS-3UTR CCA 90 bp | TGCCACTGGGAGCTGACTGGACCTTCTCCCTCTTGCGACCATCAATCCCACGTGGGCTCCACAGAGGGGTaGGGGCTTGTCACCAGGTTT | + |
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Preference number: 4 (lower is better) Translates to: CHWELTGPSPSCDHQSHVGSTEG*GLVTRF Trigger: AAACCTGGTGACAAGCCCCCACCCCTCTGTGGAGCC...CACGTGGGATTGATGGTCGCAAGAGGGAGAAGGTCCAGTCAGCTCCCAGTGGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032956.10 |
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| CDS-3UTR CCA 90 bp | AGGGTTAGCTTTCCACTGGGGCAGTGGGATGATGCGCCGACGGCTCAGGGTGTGGTCTGCATCCGCTCGTaGGTTTTCTGGATGTTCACC | + |
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Preference number: 4 (lower is better) Translates to: RVSFPLGQWDDAPTAQGVVCIRS*VFWMFT Trigger: GGTGAACATCCAGAAAACCCACGAGCGGATGCAGAC...CACACCCTGAGCCGTCGGCGCATCATCCCACTGCCCCAGTGGAAAGCTAACCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000205507.2 ENSMUST00000206359.2 |
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| CDS-3UTR CCA 90 bp | TGCCACTGGGAGCTGACTGGACCTTCTCCCTCTTGCGACCATCAATCCCACGTGCCTCCGCATCAGTCTTaGCGGTTGTGTAGAGGCCTC | + |
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Preference number: 4 (lower is better) Translates to: CHWELTGPSPSCDHQSHVPPHQS*RLCRGL Trigger: GAGGCCTCTACACAACCGCCAAGACTGATGCGGAGG...CACGTGGGATTGATGGTCGCAAGAGGGAGAAGGTCCAGTCAGCTCCCAGTGGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032956.10 |
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| CDS-3UTR TCA 90 bp | AGCTTTCCACTGGGGCAGTGGGATGATGCGCCGACGGCTCAGGGTGTGTCTCTCGTTTGCTTGATCAGCTaGTGGAGCTCTGTGAGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: SFPLGQWDDAPTAQGVSLVCLIS*WSSVRS Trigger: GCTTCTCACAGAGCTCCATCAGCTGATCAAGCAAAC...GAGAGACACACCCTGAGCCGTCGGCGCATCATCCCACTGCCCCAGTGGAAAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000205507.2 ENSMUST00000206359.2 |
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| CDS-3UTR CCA 90 bp | GTCTGTCTCAGGGTTAGCTTTCCACTGGGGCAGTGGGATGATGCGCCGACGGCTGTCTGCATCCGCTCGTaGGTTTTCTGGATGTTCACC | + |
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Preference number: 4 (lower is better) Translates to: VCLRVSFPLGQWDDAPTAVCIRS*VFWMFT Trigger: GGTGAACATCCAGAAAACCCACGAGCGGATGCAGAC...AGCCGTCGGCGCATCATCCCACTGCCCCAGTGGAAAGCTAACCCTGAGACAGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000205507.2 ENSMUST00000206359.2 |
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| CDS-3UTR TCA 90 bp | TTAGCTTTCCACTGGGGCAGTGGGATGATGCGCCGACGGCTCAGGGTGTGTCTCGTTTGCTTGATCAGCTaGTGGAGCTCTGTGAGAAGC | + |
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Preference number: 4 (lower is better) Translates to: LAFHWGSGMMRRRLRVCLVCLIS*WSSVRS Trigger: GCTTCTCACAGAGCTCCATCAGCTGATCAAGCAAAC...GAGACACACCCTGAGCCGTCGGCGCATCATCCCACTGCCCCAGTGGAAAGCTAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000205507.2 ENSMUST00000206359.2 |
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| CDS-3UTR TCA 90 bp | CTGGACCTTCTCCCTCTTGCGACCATCAATCCCACGTGCCTGATGGAGGATGGCCTTCCTGGGTTTGCTTaGTCAGCTGATGGAGCTCTG | + |
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Preference number: 4 (lower is better) Translates to: LDLLPLATINPTCLMEDGLPGFA*SADGAL Trigger: CAGAGCTCCATCAGCTGATCAAGCAAACCCAGGAAG...GCCATCCTCCATCAGGCACGTGGGATTGATGGTCGCAAGAGGGAGAAGGTCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032956.10 |
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| CDS-3UTR GCA 90 bp | CTGGGGCAGTGGGATGATGCGCCGACGGCTCAGGGTGTGTCTCTCTTTGCCTTCATCTTGTTCTCTGTCTaGATCCGCTCGTGGGTTTTC | + |
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Preference number: 4 (lower is better) Translates to: LGQWDDAPTAQGVSLFAFILFSV*IRSWVF Trigger: GAAAACCCACGAGCGGATGCAGACAGAGAACAAGAT...GAAGGCAAAGAGAGACACACCCTGAGCCGTCGGCGCATCATCCCACTGCCCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000205507.2 ENSMUST00000206359.2 |
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| CDS-3UTR TCA 90 bp | CTGGACCTTCTCCCTCTTGCGACCATCAATCCCACGTGCCTGATGGAGGATGGCGTTTGCTTGATCAGCTaGTGGAGCTCTGTGAGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: LDLLPLATINPTCLMEDGVCLIS*WSSVRS Trigger: GCTTCTCACAGAGCTCCATCAGCTGATCAAGCAAAC...GCCATCCTCCATCAGGCACGTGGGATTGATGGTCGCAAGAGGGAGAAGGTCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032956.10 |
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| CDS-3UTR TCA 90 bp | GGGTTAGCTTTCCACTGGGGCAGTGGGATGATGCGCCGACGGCTCAGGGTGTGTCTTCCAACAGAGACTTaGTCTCAGCTATCTTATCCA | + |
|
Preference number: 4 (lower is better) Translates to: GLAFHWGSGMMRRRLRVCLPTET*SQLSYP Trigger: TGGATAAGATAGCTGAGATCAAGTCTCTGTTGGAAG...ACACACCCTGAGCCGTCGGCGCATCATCCCACTGCCCCAGTGGAAAGCTAACCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000205507.2 ENSMUST00000206359.2 |
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| CDS-3UTR TCA 90 bp | TGGGATGATGCGCCGACGGCTCAGGGTGTGTCTCTCTTTGCCTTCTTCATCAATCTTCCTGGGTTTGCTTaGTCAGCTGATGGAGCTCTG | + |
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Preference number: 4 (lower is better) Translates to: WDDAPTAQGVSLFAFFINLPGFA*SADGAL Trigger: CAGAGCTCCATCAGCTGATCAAGCAAACCCAGGAAG...ATTGATGAAGAAGGCAAAGAGAGACACACCCTGAGCCGTCGGCGCATCATCCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000205507.2 ENSMUST00000206359.2 |
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| CDS-3UTR GCA 90 bp | TCTCCCTCTTGCGACCATCAATCCCACGTGCCTGATGGAGGATGGCAAGAGGGTATCTTGTTCTCTGTCTaGATCCGCTCGTGGGTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: SPSCDHQSHVPDGGWQEGILFSV*IRSWVF Trigger: GAAAACCCACGAGCGGATGCAGACAGAGAACAAGAT...ACCCTCTTGCCATCCTCCATCAGGCACGTGGGATTGATGGTCGCAAGAGGGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032956.10 |
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| CDS-3UTR GCA 90 bp | TGCCACTGGGAGCTGACTGGACCTTCTCCCTCTTGCGACCATCAATCCCACGTGGGGTGTGTCTCTCTTTaGCTTCTTCATCAATGTCGT | + |
|
Preference number: 4 (lower is better) Translates to: CHWELTGPSPSCDHQSHVGCVSL*LLHQCR Trigger: ACGACATTGATGAAGAAGGCAAAGAGAGACACACCC...CACGTGGGATTGATGGTCGCAAGAGGGAGAAGGTCCAGTCAGCTCCCAGTGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032956.10 |
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| CDS-3UTR CCA 90 bp | TTTGATCATAGGAACTCCTTTGTAGCCTTCTCCCATGAGGTTGGCAGTGGCAGATTTCCACTGGGGCAGTaGGATGATGCGCCGACGGCT | + |
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Preference number: 4 (lower is better) Translates to: FDHRNSFVAFSHEVGSGRFPLGQ*DDAPTA Trigger: AGCCGTCGGCGCATCATCCCACTGCCCCAGTGGAAA...TCTGCCACTGCCAACCTCATGGGAGAAGGCTACAAAGGAGTTCCTATGATCAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032956.10 |
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| CDS-3UTR TCA 90 bp | CAGTGGGATGATGCGCCGACGGCTCAGGGTGTGTCTCTCTTTGCCTTCTTCATCCTTCCAACAGAGACTTaGTCTCAGCTATCTTATCCA | + |
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Preference number: 4 (lower is better) Translates to: QWDDAPTAQGVSLFAFFILPTET*SQLSYP Trigger: TGGATAAGATAGCTGAGATCAAGTCTCTGTTGGAAG...GATGAAGAAGGCAAAGAGAGACACACCCTGAGCCGTCGGCGCATCATCCCACTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000205507.2 ENSMUST00000206359.2 |
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| CDS-3UTR CCA 90 bp | CATAGGAACTCCTTTGTAGCCTTCTCCCATGAGGTTGGCAGTGGCAGATTCAAGGTCTGCATCCGCTCGTaGGTTTTCTGGATGTTCACC | + |
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Preference number: 4 (lower is better) Translates to: HRNSFVAFSHEVGSGRFKVCIRS*VFWMFT Trigger: GGTGAACATCCAGAAAACCCACGAGCGGATGCAGAC...CTTGAATCTGCCACTGCCAACCTCATGGGAGAAGGCTACAAAGGAGTTCCTATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032956.10 |
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| CDS-3UTR TCA 90 bp | CCCAGGAGACATGGTGAGAGGGAAGAGTATTTATTTGATCATAGGAACTCCTTTGGCCACATAGTCCCCTaGGGCTGGAATGGCTCCACA | + |
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Preference number: 4 (lower is better) Translates to: PRRHGEREEYLFDHRNSFGHIVP*GWNGST Trigger: TGTGGAGCCATTCCAGCCTCAGGGGACTATGTGGCC...AAAGGAGTTCCTATGATCAAATAAATACTCTTCCCTCTCACCATGTCTCCTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032956.10 |
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| CDS-3UTR TCA 90 bp | GTGAGGCCCAGGAGACATGGTGAGAGGGAAGAGTATTTATTTGATCATAGGAACCTTCCAACAGAGACTTaGTCTCAGCTATCTTATCCA | + |
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Preference number: 4 (lower is better) Translates to: VRPRRHGEREEYLFDHRNLPTET*SQLSYP Trigger: TGGATAAGATAGCTGAGATCAAGTCTCTGTTGGAAG...GTTCCTATGATCAAATAAATACTCTTCCCTCTCACCATGTCTCCTGGGCCTCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032956.10 |
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| CDS-3UTR CAA 90 bp | CCACTGGGGCAGTGGGATGATGCGCCGACGGCTCAGGGTGTGTCTCTCTTTGCCCATCAGTCTTGGCGGTaGTGTAGAGGCCTCGAAGCT | + |
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Preference number: 5 (lower is better) Translates to: PLGQWDDAPTAQGVSLFAHQSWR*CRGLEA Trigger: AGCTTCGAGGCCTCTACACAACCGCCAAGACTGATG...GGCAAAGAGAGACACACCCTGAGCCGTCGGCGCATCATCCCACTGCCCCAGTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000205507.2 ENSMUST00000206359.2 |
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| CDS-3UTR CAA 90 bp | AGCTTTCCACTGGGGCAGTGGGATGATGCGCCGACGGCTCAGGGTGTGTCTCTCCATCAGTCTTGGCGGTaGTGTAGAGGCCTCGAAGCT | + |
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Preference number: 5 (lower is better) Translates to: SFPLGQWDDAPTAQGVSLHQSWR*CRGLEA Trigger: AGCTTCGAGGCCTCTACACAACCGCCAAGACTGATG...GAGAGACACACCCTGAGCCGTCGGCGCATCATCCCACTGCCCCAGTGGAAAGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000205507.2 ENSMUST00000206359.2 |
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| CDS-3UTR CAA 90 bp | GGGCAGTGGGATGATGCGCCGACGGCTCAGGGTGTGTCTCTCTTTGCCTTCTTCACCCTAGCAGCCACCTaGTCTCCAGGTTTGGCCACA | + |
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Preference number: 5 (lower is better) Translates to: GQWDDAPTAQGVSLFAFFTLAAT*SPGLAT Trigger: TGTGGCCAAACCTGGAGACAAGGTGGCTGCTAGGGT...GAAGAAGGCAAAGAGAGACACACCCTGAGCCGTCGGCGCATCATCCCACTGCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205507.2 |
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| CDS-3UTR CAA 90 bp | CTGGGGCAGTGGGATGATGCGCCGACGGCTCAGGGTGTGTCTCTCTTTGCCTTCTGGCCACATAGTCCCTaGTCACCAGGTTTCCCGATC | + |
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Preference number: 5 (lower is better) Translates to: LGQWDDAPTAQGVSLFAFWPHSP*SPGFPI Trigger: GATCGGGAAACCTGGTGACAAGGGACTATGTGGCCA...GAAGGCAAAGAGAGACACACCCTGAGCCGTCGGCGCATCATCCCACTGCCCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206359.2 |
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| CDS-3UTR CAA 90 bp | CACTGGGGCAGTGGGATGATGCGCCGACGGCTCAGGGTGTGTCTCTCTTTGCCTTGGATGTTCACCAAGTaGTGCTCACTTCTCGACCGC | + |
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Preference number: 5 (lower is better) Translates to: HWGSGMMRRRLRVCLSLPWMFTK*CSLLDR Trigger: GCGGTCGAGAAGTGAGCACAACTTGGTGAACATCCA...AGGCAAAGAGAGACACACCCTGAGCCGTCGGCGCATCATCCCACTGCCCCAGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000205507.2 ENSMUST00000206359.2 |
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| CDS-3UTR CAA 90 bp | AGCTTTCCACTGGGGCAGTGGGATGATGCGCCGACGGCTCAGGGTGTGTCTCTCTGGATGTTCACCAAGTaGTGCTCACTTCTCGACCGC | + |
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Preference number: 5 (lower is better) Translates to: SFPLGQWDDAPTAQGVSLWMFTK*CSLLDR Trigger: GCGGTCGAGAAGTGAGCACAACTTGGTGAACATCCA...GAGAGACACACCCTGAGCCGTCGGCGCATCATCCCACTGCCCCAGTGGAAAGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000205507.2 ENSMUST00000206359.2 |
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| CDS CCA 90 bp | CCAGCGCTTTGCGGAGGATGTTGCACTCGGCCTCCGCATCAGTCTTaGCGGTTGTGTAGAGGCCTCGAAGCTTTGTCCGGTAATAAGGAG | + |
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Preference number: 5 (lower is better) Translates to: PALCGGCCTRPPHQS*RLCRGLEALSGNKE Trigger: CTCCTTATTACCGGACAAAGCTTCGAGGCCTCTACACAACCGCCAAGACTGATGCGGAGGCCGAGTGCAACATCCTCCGCAAAGCGCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032956.10 ENSMUST00000205507.2 ENSMUST00000206359.2 |
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| CDS-3UTR CAA 90 bp | TCTCCCTCTTGCGACCATCAATCCCACGTGCCTGATGGAGGATGGCAAGAGGGTCATCAGTCTTGGCGGTaGTGTAGAGGCCTCGAAGCT | + |
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Preference number: 5 (lower is better) Translates to: SPSCDHQSHVPDGGWQEGHQSWR*CRGLEA Trigger: AGCTTCGAGGCCTCTACACAACCGCCAAGACTGATG...ACCCTCTTGCCATCCTCCATCAGGCACGTGGGATTGATGGTCGCAAGAGGGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032956.10 |
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| CDS-3UTR CAA 90 bp | GGGCAGTGGGATGATGCGCCGACGGCTCAGGGTGTGTCTCTCTTTGCCTTCTTCAGAGGCCTCGAAGCTTaGTCCGGTAATAAGGAGAAA | + |
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Preference number: 5 (lower is better) Translates to: GQWDDAPTAQGVSLFAFFRGLEA*SGNKEK Trigger: TTTCTCCTTATTACCGGACAAAGCTTCGAGGCCTCT...GAAGAAGGCAAAGAGAGACACACCCTGAGCCGTCGGCGCATCATCCCACTGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000205507.2 ENSMUST00000206359.2 |
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| CDS-3UTR CAA 90 bp | TTTGATCATAGGAACTCCTTTGTAGCCTTCTCCCATGAGGTTGGCAGTGGCAGACAGAGGGGTGGGGGCTaGTCACCAGGTTTCCCGATC | + |
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Preference number: 5 (lower is better) Translates to: FDHRNSFVAFSHEVGSGRQRGGG*SPGFPI Trigger: GATCGGGAAACCTGGTGACAAGCCCCCACCCCTCTG...TCTGCCACTGCCAACCTCATGGGAGAAGGCTACAAAGGAGTTCCTATGATCAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032956.10 |
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| CDS TCA 90 bp | GACCTGCGATCTTGGCCGCAATCCGCCTCTCTTCCAACAGAGACTTaGTCTCAGCTATCTTATCCAGCGCTTTGCGGAGGATGTTGCACT | + |
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Preference number: 5 (lower is better) Translates to: DLRSWPQSASLPTET*SQLSYPALCGGCCT Trigger: AGTGCAACATCCTCCGCAAAGCGCTGGATAAGATAGCTGAGATCAAGTCTCTGTTGGAAGAGAGGCGGATTGCGGCCAAGATCGCAGGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032956.10 ENSMUST00000205507.2 ENSMUST00000206359.2 |
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| CDS-3UTR CAA 90 bp | TGGGGCAGTGGGATGATGCGCCGACGGCTCAGGGTGTGTCTCTCTTTGCCTTCTTCTTCCAACAGAGACTaGATCTCAGCTATCTTATCC | + |
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Preference number: 5 (lower is better) Translates to: WGSGMMRRRLRVCLSLPSSSNRD*ISAILS Trigger: GGATAAGATAGCTGAGATCAAGTCTCTGTTGGAAGA...AGAAGGCAAAGAGAGACACACCCTGAGCCGTCGGCGCATCATCCCACTGCCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000205507.2 ENSMUST00000206359.2 |
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| CDS-3UTR CAA 90 bp | GATCATAGGAACTCCTTTGTAGCCTTCTCCCATGAGGTTGGCAGTGGCAGATTCTGGATGTTCACCAAGTaGTGCTCACTTCTCGACCGC | + |
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Preference number: 5 (lower is better) Translates to: DHRNSFVAFSHEVGSGRFWMFTK*CSLLDR Trigger: GCGGTCGAGAAGTGAGCACAACTTGGTGAACATCCA...GAATCTGCCACTGCCAACCTCATGGGAGAAGGCTACAAAGGAGTTCCTATGATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032956.10 |
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| CDS-3UTR CAA 90 bp | CAGTGGGATGATGCGCCGACGGCTCAGGGTGTGTCTCTCTTTGCCTTCTTCATCTCTTCCAACAGAGACTaGATCTCAGCTATCTTATCC | + |
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Preference number: 5 (lower is better) Translates to: QWDDAPTAQGVSLFAFFISSNRD*ISAILS Trigger: GGATAAGATAGCTGAGATCAAGTCTCTGTTGGAAGA...GATGAAGAAGGCAAAGAGAGACACACCCTGAGCCGTCGGCGCATCATCCCACTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000205507.2 ENSMUST00000206359.2 |
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| CDS-3UTR CAA 90 bp | AGGAGACATGGTGAGAGGGAAGAGTATTTATTTGATCATAGGAACTCCTTTGTAACCCTAGCAGCCACCTaGTCTCCAGGTTTGGCCACA | + |
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Preference number: 5 (lower is better) Translates to: RRHGEREEYLFDHRNSFVTLAAT*SPGLAT Trigger: TGTGGCCAAACCTGGAGACAAGGTGGCTGCTAGGGT...TACAAAGGAGTTCCTATGATCAAATAAATACTCTTCCCTCTCACCATGTCTCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032956.10 |
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| CDS-3UTR CAA 90 bp | CCCAGGAGACATGGTGAGAGGGAAGAGTATTTATTTGATCATAGGAACTCCTTTAGAGGCCTCGAAGCTTaGTCCGGTAATAAGGAGAAA | + |
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Preference number: 5 (lower is better) Translates to: PRRHGEREEYLFDHRNSFRGLEA*SGNKEK Trigger: TTTCTCCTTATTACCGGACAAAGCTTCGAGGCCTCT...AAAGGAGTTCCTATGATCAAATAAATACTCTTCCCTCTCACCATGTCTCCTGGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032956.10 |
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| CDS-3UTR CAA 90 bp | CCAGGAGACATGGTGAGAGGGAAGAGTATTTATTTGATCATAGGAACTCCTTTGAGGGTGTGTCTCTCTTaGCCTTCTTCATCAATGTCG | + |
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Preference number: 5 (lower is better) Translates to: PGDMVRGKSIYLIIGTPLRVCLS*PSSSMS Trigger: CGACATTGATGAAGAAGGCAAAGAGAGACACACCCT...CAAAGGAGTTCCTATGATCAAATAAATACTCTTCCCTCTCACCATGTCTCCTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032956.10 |
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| CDS-3UTR CAA 90 bp | CCAGGAGACATGGTGAGAGGGAAGAGTATTTATTTGATCATAGGAACTCCTTTGTCTTCCAACAGAGACTaGATCTCAGCTATCTTATCC | + |
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Preference number: 5 (lower is better) Translates to: PGDMVRGKSIYLIIGTPLSSNRD*ISAILS Trigger: GGATAAGATAGCTGAGATCAAGTCTCTGTTGGAAGA...CAAAGGAGTTCCTATGATCAAATAAATACTCTTCCCTCTCACCATGTCTCCTGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032956.10 |
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| CDS CCA 72 bp | TGCGGAGGATGTTGCACTCGGCCTCCGCATCAGTCTTaGCGGTTGTGTAGAGGCCTCGAAGCTTTGTCCGGT | + |
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Preference number: 6 (lower is better) Translates to: CGGCCTRPPHQS*RLCRGLEALSG Trigger: ACCGGACAAAGCTTCGAGGCCTCTACACAACCGCCAAGACTGATGCGGAGGCCGAGTGCAACATCCTCCGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032956.10 ENSMUST00000205507.2 ENSMUST00000206359.2 |
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| CDS GCA 72 bp | TCTCAGCTATCTTATCCAGCGCTTTGCGGAGGATGTTaGACTCGGCCTCCGCATCAGTCTTGGCGGTTGTGT | + |
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Preference number: 6 (lower is better) Translates to: SQLSYPALCGGC*TRPPHQSWRLC Trigger: ACACAACCGCCAAGACTGATGCGGAGGCCGAGTGCAACATCCTCCGCAAAGCGCTGGATAAGATAGCTGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032956.10 ENSMUST00000205507.2 ENSMUST00000206359.2 |
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| CDS CAA 72 bp | GGATGTTGCACTCGGCCTCCGCATCAGTCTTGGCGGTaGTGTAGAGGCCTCGAAGCTTTGTCCGGTAATAAG | + |
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Preference number: 6 (lower is better) Translates to: GCCTRPPHQSWR*CRGLEALSGNK Trigger: CTTATTACCGGACAAAGCTTCGAGGCCTCTACACAACCGCCAAGACTGATGCGGAGGCCGAGTGCAACATCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032956.10 ENSMUST00000205507.2 ENSMUST00000206359.2 |
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| CDS CAA 72 bp | ATCTCAGCTATCTTATCCAGCGCTTTGCGGAGGATGTaGCACTCGGCCTCCGCATCAGTCTTGGCGGTTGTG | + |
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Preference number: 6 (lower is better) Translates to: ISAILSSALRRM*HSASASVLAVV Trigger: CACAACCGCCAAGACTGATGCGGAGGCCGAGTGCAACATCCTCCGCAAAGCGCTGGATAAGATAGCTGAGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032956.10 ENSMUST00000205507.2 ENSMUST00000206359.2 |
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| CDS CAA 72 bp | TGCATCCGCTCGTGGGTTTTCTGGATGTTCACCAAGTaGTGCTCACTTCTCGACCGCTCTTCCTGGGTTTGC | + |
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Preference number: 6 (lower is better) Translates to: CIRSWVFWMFTK*CSLLDRSSWVC Trigger: GCAAACCCAGGAAGAGCGGTCGAGAAGTGAGCACAACTTGGTGAACATCCAGAAAACCCACGAGCGGATGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032956.10 ENSMUST00000205507.2 ENSMUST00000206359.2 |
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| CDS CAA 90 bp | CGGCCTCCGCATCAGTCTTGGCGGTTGTGTAGAGGCCTCGAAGCTTaGTCCGGTAATAAGGAGAAATCTTGTTCTCTGTCTGCATCCGCT | + |
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Preference number: 6 (lower is better) Translates to: RPPHQSWRLCRGLEA*SGNKEKSCSLSASA Trigger: AGCGGATGCAGACAGAGAACAAGATTTCTCCTTATTACCGGACAAAGCTTCGAGGCCTCTACACAACCGCCAAGACTGATGCGGAGGCCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032956.10 ENSMUST00000205507.2 ENSMUST00000206359.2 |
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| CDS CAA 90 bp | CTTTGCGGAGGATGTTGCACTCGGCCTCCGCATCAGTCTTGGCGGTaGTGTAGAGGCCTCGAAGCTTTGTCCGGTAATAAGGAGAAATCT | + |
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Preference number: 6 (lower is better) Translates to: LCGGCCTRPPHQSWR*CRGLEALSGNKEKS Trigger: AGATTTCTCCTTATTACCGGACAAAGCTTCGAGGCCTCTACACAACCGCCAAGACTGATGCGGAGGCCGAGTGCAACATCCTCCGCAAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032956.10 ENSMUST00000205507.2 ENSMUST00000206359.2 |
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| CDS CAA 90 bp | CTCTCTTCCAACAGAGACTTGATCTCAGCTATCTTATCCAGCGCTTaGCGGAGGATGTTGCACTCGGCCTCCGCATCAGTCTTGGCGGTT | + |
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Preference number: 6 (lower is better) Translates to: LSSNRDLISAILSSA*RRMLHSASASVLAV Trigger: AACCGCCAAGACTGATGCGGAGGCCGAGTGCAACATCCTCCGCAAAGCGCTGGATAAGATAGCTGAGATCAAGTCTCTGTTGGAAGAGAG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032956.10 ENSMUST00000205507.2 ENSMUST00000206359.2 |
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| CDS CAA 90 bp | AGACCTGCGATCTTGGCCGCAATCCGCCTCTCTTCCAACAGAGACTaGATCTCAGCTATCTTATCCAGCGCTTTGCGGAGGATGTTGCAC | + |
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Preference number: 6 (lower is better) Translates to: RPAILAAIRLSSNRD*ISAILSSALRRMLH Trigger: GTGCAACATCCTCCGCAAAGCGCTGGATAAGATAGCTGAGATCAAGTCTCTGTTGGAAGAGAGGCGGATTGCGGCCAAGATCGCAGGTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032956.10 ENSMUST00000205507.2 ENSMUST00000206359.2 |
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| CDS TCA 72 bp | TCTTGGCCGCAATCCGCCTCTCTTCCAACAGAGACTTaGTCTCAGCTATCTTATCCAGCGCTTTGCGGAGGA | + |
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Preference number: 6 (lower is better) Translates to: SWPQSASLPTET*SQLSYPALCGG Trigger: TCCTCCGCAAAGCGCTGGATAAGATAGCTGAGATCAAGTCTCTGTTGGAAGAGAGGCGGATTGCGGCCAAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032956.10 ENSMUST00000205507.2 ENSMUST00000206359.2 |
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| CDS GCA 72 bp | ATCCGCTCGTGGGTTTTCTGGATGTTCACCAAGTTGTaGTCACTTCTCGACCGCTCTTCCTGGGTTTGCTTG | + |
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Preference number: 6 (lower is better) Translates to: IRSWVFWMFTKL*SLLDRSSWVCL Trigger: CAAGCAAACCCAGGAAGAGCGGTCGAGAAGTGAGCACAACTTGGTGAACATCCAGAAAACCCACGAGCGGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032956.10 ENSMUST00000205507.2 ENSMUST00000206359.2 |
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| CDS CAA 72 bp | AACAGAGACTTGATCTCAGCTATCTTATCCAGCGCTTaGCGGAGGATGTTGCACTCGGCCTCCGCATCAGTC | + |
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Preference number: 6 (lower is better) Translates to: NRDLISAILSSA*RRMLHSASASV Trigger: GACTGATGCGGAGGCCGAGTGCAACATCCTCCGCAAAGCGCTGGATAAGATAGCTGAGATCAAGTCTCTGTT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032956.10 ENSMUST00000205507.2 ENSMUST00000206359.2 |
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| CDS CAA 72 bp | ATCTTGGCCGCAATCCGCCTCTCTTCCAACAGAGACTaGATCTCAGCTATCTTATCCAGCGCTTTGCGGAGG | + |
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Preference number: 6 (lower is better) Translates to: ILAAIRLSSNRD*ISAILSSALRR Trigger: CCTCCGCAAAGCGCTGGATAAGATAGCTGAGATCAAGTCTCTGTTGGAAGAGAGGCGGATTGCGGCCAAGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032956.10 ENSMUST00000205507.2 ENSMUST00000206359.2 |
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| CDS CAA 90 bp | TTCTCTGTCTGCATCCGCTCGTGGGTTTTCTGGATGTTCACCAAGTaGTGCTCACTTCTCGACCGCTCTTCCTGGGTTTGCTTGATCAGC | + |
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Preference number: 6 (lower is better) Translates to: FSVCIRSWVFWMFTK*CSLLDRSSWVCLIS Trigger: GCTGATCAAGCAAACCCAGGAAGAGCGGTCGAGAAGTGAGCACAACTTGGTGAACATCCAGAAAACCCACGAGCGGATGCAGACAGAGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032956.10 ENSMUST00000205507.2 ENSMUST00000206359.2 |
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| CDS CCA 72 bp | ATCTTGTTCTCTGTCTGCATCCGCTCGTGGGTTTTCTaGATGTTCACCAAGTTGTGCTCACTTCTCGACCGC | + |
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Preference number: 6 (lower is better) Translates to: ILFSVCIRSWVF*MFTKLCSLLDR Trigger: GCGGTCGAGAAGTGAGCACAACTTGGTGAACATCCAGAAAACCCACGAGCGGATGCAGACAGAGAACAAGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032956.10 ENSMUST00000205507.2 ENSMUST00000206359.2 |
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| CDS CAA 72 bp | CATCAGTCTTGGCGGTTGTGTAGAGGCCTCGAAGCTTaGTCCGGTAATAAGGAGAAATCTTGTTCTCTGTCT | + |
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Preference number: 6 (lower is better) Translates to: HQSWRLCRGLEA*SGNKEKSCSLS Trigger: AGACAGAGAACAAGATTTCTCCTTATTACCGGACAAAGCTTCGAGGCCTCTACACAACCGCCAAGACTGATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032956.10 ENSMUST00000205507.2 ENSMUST00000206359.2 |
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