Pregenerated sensors for SGCG (Mus musculus)
Ensembl gene IDs: ENSMUSG00000035296Ensembl transcript IDs: ENSMUST00000077954.13, ENSMUST00000121148.8
Found 127 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGCCTCTCCTGGCCTCTCATGGCCCCCAGCCTCAGCTGTTCTCCATaGCCCCTTCATGGTTTGGAGCAGAGACCTGGGAGACTCTTACAC | + |
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Preference number: 1 (lower is better) Translates to: SLSWPLMAPSLSCSP*PLHGLEQRPGRLLH Trigger: GTGTAAGAGTCTCCCAGGTCTCTGCTCCAAACCATGAAGGGGTCATGGAGAACAGCTGAGGCTGGGGGCCATGAGAGGCCAGGAGAGGCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000077954.13 |
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| 3UTR CCA 90 bp | TTCACTCTGCAGGTGCAGCTGTCCTTGGTGGTTGTCGCGTGGTACTaGCACCTCCAAAATGCTGGGGTCTCTGCTGCATTTGGATGGCTC | + |
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Preference number: 1 (lower is better) Translates to: FTLQVQLSLVVVAWY*HLQNAGVSAAFGWL Trigger: GAGCCATCCAAATGCAGCAGAGACCCCAGCATTTTGGAGGTGCCAGTACCACGCGACAACCACCAAGGACAGCTGCACCTGCAGAGTGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077954.13 |
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| 3UTR CCA 90 bp | GCTAGCTTCACTCTGCAGGTGCAGCTGTCCTTGGTGGTTGTCGCGTaGTACTGGCACCTCCAAAATGCTGGGGTCTCTGCTGCATTTGGA | + |
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Preference number: 1 (lower is better) Translates to: ASFTLQVQLSLVVVA*YWHLQNAGVSAAFG Trigger: TCCAAATGCAGCAGAGACCCCAGCATTTTGGAGGTGCCAGTACCACGCGACAACCACCAAGGACAGCTGCACCTGCAGAGTGAAGCTAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077954.13 |
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| 3UTR GCA 90 bp | GGCAGGAACATGGAGGTAAGGACTGAAGCAGAGGCCGTGGAGGAGTaGTGCTTACTGTCCACACACTGCATGCATCCACACATTGCACAC | + |
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Preference number: 1 (lower is better) Translates to: GRNMEVRTEAEAVEE*CLLSTHCMHPHIAH Trigger: GTGTGCAATGTGTGGATGCATGCAGTGTGTGGACAGTAAGCAGCACTCCTCCACGGCCTCTGCTTCAGTCCTTACCTCCATGTTCCTGCC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077954.13 |
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| 3UTR GCA 90 bp | TGTCCACACACTGCATGCATCCACACATTGCACACATTCACACACTaGATGCATAGCTGCCTCTCTGCAGCTGCACCCAGCCTCTCGTGT | + |
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Preference number: 1 (lower is better) Translates to: CPHTACIHTLHTFTH*MHSCLSAAAPSLSC Trigger: ACACGAGAGGCTGGGTGCAGCTGCAGAGAGGCAGCTATGCATGCAGTGTGTGAATGTGTGCAATGTGTGGATGCATGCAGTGTGTGGACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077954.13 |
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| 3UTR CCA 90 bp | GCCTCTCATGGCCCCCAGCCTCAGCTGTTCTCCATGACCCCTTCATaGTTTGGAGCAGAGACCTGGGAGACTCTTACACATTACCAAGTT | + |
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Preference number: 1 (lower is better) Translates to: ASHGPQPQLFSMTPS*FGAETWETLTHYQV Trigger: AACTTGGTAATGTGTAAGAGTCTCCCAGGTCTCTGCTCCAAACCATGAAGGGGTCATGGAGAACAGCTGAGGCTGGGGGCCATGAGAGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000077954.13 |
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| 3UTR GCA 90 bp | CACACACTGCATGCATCCACACATTGCACACATTCACACACTGCATaGATAGCTGCCTCTCTGCAGCTGCACCCAGCCTCTCGTGTTTGT | + |
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Preference number: 1 (lower is better) Translates to: HTLHASTHCTHSHTA*IAASLQLHPASRVC Trigger: ACAAACACGAGAGGCTGGGTGCAGCTGCAGAGAGGCAGCTATGCATGCAGTGTGTGAATGTGTGCAATGTGTGGATGCATGCAGTGTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077954.13 |
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| 3UTR CCA 90 bp | AGTATCAGTGCAGCCTTCTTCCCTGGCTCTGCCATCCACAGCACATaGGACTTATCTTCTAGACTCAGGCTAGCTTCACTCTGCAGGTGC | + |
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Preference number: 1 (lower is better) Translates to: SISAAFFPGSAIHST*DLSSRLRLASLCRC Trigger: GCACCTGCAGAGTGAAGCTAGCCTGAGTCTAGAAGATAAGTCCCATGTGCTGTGGATGGCAGAGCCAGGGAAGAAGGCTGCACTGATACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077954.13 |
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| 3UTR GCA 90 bp | AGGAACATGGAGGTAAGGACTGAAGCAGAGGCCGTGGAGGAGTGCTaGTTACTGTCCACACACTGCATGCATCCACACATTGCACACATT | + |
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Preference number: 1 (lower is better) Translates to: RNMEVRTEAEAVEEC*LLSTHCMHPHIAHI Trigger: AATGTGTGCAATGTGTGGATGCATGCAGTGTGTGGACAGTAAGCAGCACTCCTCCACGGCCTCTGCTTCAGTCCTTACCTCCATGTTCCT 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077954.13 |
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| 3UTR CCA 90 bp | TCATGGCCCCCAGCCTCAGCTGTTCTCCATGACCCCTTCATGGTTTaGAGCAGAGACCTGGGAGACTCTTACACATTACCAAGTTCATCA | + |
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Preference number: 1 (lower is better) Translates to: SWPPASAVLHDPFMV*SRDLGDSYTLPSSS Trigger: TGATGAACTTGGTAATGTGTAAGAGTCTCCCAGGTCTCTGCTCCAAACCATGAAGGGGTCATGGAGAACAGCTGAGGCTGGGGGCCATGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000077954.13 |
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| 3UTR CCA 90 bp | CCTCAGCTGTTCTCCATGACCCCTTCATGGTTTGGAGCAGAGACCTaGGAGACTCTTACACATTACCAAGTTCATCAGCCAGCACAAGAC | + |
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Preference number: 1 (lower is better) Translates to: PQLFSMTPSWFGAET*ETLTHYQVHQPAQD Trigger: GTCTTGTGCTGGCTGATGAACTTGGTAATGTGTAAGAGTCTCCCAGGTCTCTGCTCCAAACCATGAAGGGGTCATGGAGAACAGCTGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077954.13 |
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| 3UTR TCA 90 bp | GATGAATACAGTGAATATGTTCCTGGTGTTTCTTTTGTGTCGTTCTaGAGCCAGGTAGTGTTGGCCCAACAGTTCCATAGGCATGTTCCC | + |
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Preference number: 1 (lower is better) Translates to: DEYSEYVPGVSFVSF*SQVVLAQQFHRHVP Trigger: GGGAACATGCCTATGGAACTGTTGGGCCAACACTACCTGGCTTCAGAACGACACAAAAGAAACACCAGGAACATATTCACTGTATTCATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077954.13 |
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| 3UTR TCA 90 bp | TCTGCCGTTGAGTACTATAAATTGTTTCCAGGTGGCAACTCAGCGTaGGAGATCTGGAGAGAGGCTGGAAAGATGAATACAGTGAATATG | + |
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Preference number: 1 (lower is better) Translates to: SAVEYYKLFPGGNSA*EIWREAGKMNTVNM Trigger: CATATTCACTGTATTCATCTTTCCAGCCTCTCTCCAGATCTCTCACGCTGAGTTGCCACCTGGAAACAATTTATAGTACTCAACGGCAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077954.13 |
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| 3UTR TCA 90 bp | TGCTGTAGTTGGTGTTTTGGCTGCAGAGCTCTCTCCAAGGGAAAATaGCCAGACCAATTTAGGGTCACATTTCAAGTTAATCTCAGTAGT | + |
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Preference number: 1 (lower is better) Translates to: CCSWCFGCRALSKGK*PDQFRVTFQVNLSS Trigger: ACTACTGAGATTAACTTGAAATGTGACCCTAAATTGGTCTGGTCATTTTCCCTTGGAGAGAGCTCTGCAGCCAAAACACCAACTACAGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077954.13 |
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| 3UTR GCA 90 bp | ACACCAGTCTTATATAATACAGAAAACAATGGAGTAAGGTGTCACTaGAGGCAGTGTACATTGAAATATCTGACACAAAAACGGAGGAGT | + |
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Preference number: 1 (lower is better) Translates to: TPVLYNTENNGVRCH*RQCTLKYLTQKRRS Trigger: ACTCCTCCGTTTTTGTGTCAGATATTTCAATGTACACTGCCTGCAGTGACACCTTACTCCATTGTTTTCTGTATTATATAAGACTGGTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000077954.13 |
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| 3UTR TCA 90 bp | CCTTTCTTACTCACAGCTGACTCTTCAGCCTCTCATGATGAGTATTaGTTTTTCCAGCAAAGTAGGGTTTTTACTTTAGCAGTTCTTAAT | + |
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Preference number: 1 (lower is better) Translates to: PFLLTADSSASHDEY*FFQQSRVFTLAVLN Trigger: ATTAAGAACTGCTAAAGTAAAAACCCTACTTTGCTGGAAAAATCAATACTCATCATGAGAGGCTGAAGAGTCAGCTGTGAGTAAGAAAGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000077954.13 |
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| 3UTR-3UTR GCA 90 bp | GGTACTGGCACCTCCAAAATGCTGGGGTCTCTGCTGCATTTGGATGGCTCCTTCCAGCACTTCCTAAGATaGTGGGAGATGAAGGCCCTG | + |
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Preference number: 2 (lower is better) Translates to: GTGTSKMLGSLLHLDGSFQHFLR*WEMKAL Trigger: CAGGGCCTTCATCTCCCAGCATCTTAGGAAGTGCTG...GAAGGAGCCATCCAAATGCAGCAGAGACCCCAGCATTTTGGAGGTGCCAGTACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077954.13 |
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| 3UTR-3UTR GCA 90 bp | GTGCAGCCTTCTTCCCTGGCTCTGCCATCCACAGCACATGGGACTTATCTTCTAAGGCTAGCTTCACTCTaGAGGTGCAGCTGTCCTTGG | + |
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Preference number: 2 (lower is better) Translates to: VQPSSLALPSTAHGTYLLRLASL*RCSCPW Trigger: CCAAGGACAGCTGCACCTGCAGAGTGAAGCTAGCCT...TAGAAGATAAGTCCCATGTGCTGTGGATGGCAGAGCCAGGGAAGAAGGCTGCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077954.13 |
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| 3UTR-3UTR CCA 90 bp | GTAGAAGTTGCATGGCTGGTTCCAAACAGCTTCACCCCTTCTTCCCTGTACGTGCCAGCCAGCCATGTTTaGGAGGAGATAGATGTCTGC | + |
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Preference number: 2 (lower is better) Translates to: VEVAWLVPNSFTPSSLYVPASHV*EEIDVC Trigger: GCAGACATCTATCTCCTCCCAAACATGGCTGGCTGG...CACGTACAGGGAAGAAGGGGTGAAGCTGTTTGGAACCAGCCATGCAACTTCTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077954.13 |
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| 3UTR-3UTR CCA 90 bp | GTTCCAAACAGCTTCACCCCTTCTTCCCTGTACGTGGAAGCCAGCACTAGGCCTTTCAGCTGCTGTAGTTaGTGTTTTGGCTGCAGAGCT | + |
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Preference number: 2 (lower is better) Translates to: VPNSFTPSSLYVEASTRPFSCCS*CFGCRA Trigger: AGCTCTGCAGCCAAAACACCAACTACAGCAGCTGAA...AGGCCTAGTGCTGGCTTCCACGTACAGGGAAGAAGGGGTGAAGCTGTTTGGAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077954.13 |
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| 3UTR-3UTR GCA 90 bp | TCCATTCTACAGGCTGCTGTGGGAGGTGGAGCCTCCATTTTGCTGTTTTCCCTGGACCCTGCCACATGGTaGCTGTATGAGTCCTTTAAT | + |
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Preference number: 2 (lower is better) Translates to: SILQAAVGGGASILLFSLDPATW*LYESFN Trigger: ATTAAAGGACTCATACAGGCACCATGTGGCAGGGTC...CAGGGAAAACAGCAAAATGGAGGCTCCACCTCCCACAGCAGCCTGTAGAATGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077954.13 |
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| 3UTR-3UTR GCA 90 bp | CTTTGGGGGTCCATTTTCATTCAGACCTCCAGTGTCCATTCTACAGGCTGCTGTCATTCACACACTGCATaGATAGCTGCCTCTCTGCAG | + |
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Preference number: 2 (lower is better) Translates to: LWGSIFIQTSSVHSTGCCHSHTA*IAASLQ Trigger: CTGCAGAGAGGCAGCTATGCATGCAGTGTGTGAATG...ACAGCAGCCTGTAGAATGGACACTGGAGGTCTGAATGAAAATGGACCCCCAAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000077954.13 |
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| 3UTR-3UTR GCA 90 bp | AGTGTCCATTCTACAGGCTGCTGTGGGAGGTGGAGCCTCCATTTTGCTGTTTTCCACACATTCACACACTaGATGCATAGCTGCCTCTCT | + |
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Preference number: 2 (lower is better) Translates to: SVHSTGCCGRWSLHFAVFHTFTH*MHSCLS Trigger: AGAGAGGCAGCTATGCATGCAGTGTGTGAATGTGTG...GAAAACAGCAAAATGGAGGCTCCACCTCCCACAGCAGCCTGTAGAATGGACACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077954.13 |
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| 3UTR-3UTR GCA 90 bp | AGGCACTTCGGGACATTTTGCCTCAGTGATACTGGCCCTTTCTTACTCACAGCTTGTCCACACACTGCATaGATCCACACATTGCACACA | + |
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Preference number: 2 (lower is better) Translates to: RHFGTFCLSDTGPFLLTACPHTA*IHTLHT Trigger: TGTGTGCAATGTGTGGATGCATGCAGTGTGTGGACA...AGCTGTGAGTAAGAAAGGGCCAGTATCACTGAGGCAAAATGTCCCGAAGTGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077954.13 |
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| 3UTR-3UTR CCA 90 bp | GTGCAGCCTTCTTCCCTGGCTCTGCCATCCACAGCACATGGGACTTATCTTCTAGATCTGGAGAGAGGCTaGAAAGATGAATACAGTGAA | + |
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Preference number: 2 (lower is better) Translates to: VQPSSLALPSTAHGTYLLDLERG*KDEYSE Trigger: TTCACTGTATTCATCTTTCCAGCCTCTCTCCAGATC...TAGAAGATAAGTCCCATGTGCTGTGGATGGCAGAGCCAGGGAAGAAGGCTGCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077954.13 |
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| 3UTR-3UTR CCA 90 bp | TCAAGTATTACCACCTCCCGATACCAAGAAGTAAAATATATGAGCCTTTGGGGGCCTGACCCTGCCACATaGTGCCTGTATGAGTCCTTT | + |
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Preference number: 2 (lower is better) Translates to: SSITTSRYQEVKYMSLWGPDPAT*CLYESF Trigger: AAAGGACTCATACAGGCACCATGTGGCAGGGTCAGG...CCCCCAAAGGCTCATATATTTTACTTCTTGGTATCGGGAGGTGGTAATACTTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000077954.13 |
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| 3UTR-3UTR CCA 90 bp | ATGAAACACCATGATCAAAAGCAACCCAGGGAGGAAAGAGTTTATTTTAGCTTACACTTCCTAAGATGCTaGGAGATGAAGGCCCTGGGG | + |
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Preference number: 2 (lower is better) Translates to: MKHHDQKQPREERVYFSLHFLRC*EMKALG Trigger: CCCCAGGGCCTTCATCTCCCAGCATCTTAGGAAGTG...TAAGCTAAAATAAACTCTTTCCTCCCTGGGTTGCTTTTGATCATGGTGTTTCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077954.13 |
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| 3UTR-3UTR CCA 90 bp | TCAAGTATTACCACCTCCCGATACCAAGAAGTAAAATATATGAGCCTTTGGGGGGCCATCCACAGCACATaGGACTTATCTTCTAGACTC | + |
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Preference number: 2 (lower is better) Translates to: SSITTSRYQEVKYMSLWGAIHST*DLSSRL Trigger: GAGTCTAGAAGATAAGTCCCATGTGCTGTGGATGGC...CCCCCAAAGGCTCATATATTTTACTTCTTGGTATCGGGAGGTGGTAATACTTGA 44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000077954.13 |
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| 3UTR-3UTR CCA 90 bp | GATACTGGCCCTTTCTTACTCACAGCTGACTCTTCAGCCTCTCATGATGAGTATGACCCTTTTACACCTTaGTCCAGAAAAGTGTCATTT | + |
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Preference number: 2 (lower is better) Translates to: DTGPFLLTADSSASHDEYDPFTP*SRKVSF Trigger: AAATGACACTTTTCTGGACCAAGGTGTAAAAGGGTC...ATACTCATCATGAGAGGCTGAAGAGTCAGCTGTGAGTAAGAAAGGGCCAGTATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077954.13 |
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| 3UTR-3UTR TCA 90 bp | TTTGAGGGATTCAAAGGTCCTTCTGAAACTTTACAATTCAAACTTCCATCAACTCTCTCCAAGGGAAAATaGCCAGACCAATTTAGGGTC | + |
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Preference number: 2 (lower is better) Translates to: FEGFKGPSETLQFKLPSTLSKGK*PDQFRV Trigger: GACCCTAAATTGGTCTGGTCATTTTCCCTTGGAGAG...AGTTGATGGAAGTTTGAATTGTAAAGTTTCAGAAGGACCTTTGAATCCCTCAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077954.13 |
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| 3UTR TCA 72 bp | TGGCCTCTCATGGCCCCCAGCCTCAGCTGTTCTCCATaGCCCCTTCATGGTTTGGAGCAGAGACCTGGGAGA | + |
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Preference number: 3 (lower is better) Translates to: WPLMAPSLSCSP*PLHGLEQRPGR Trigger: TCTCCCAGGTCTCTGCTCCAAACCATGAAGGGGTCATGGAGAACAGCTGAGGCTGGGGGCCATGAGAGGCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000077954.13 |
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| 3UTR CCA 72 bp | GGCCCCCAGCCTCAGCTGTTCTCCATGACCCCTTCATaGTTTGGAGCAGAGACCTGGGAGACTCTTACACAT | + |
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Preference number: 3 (lower is better) Translates to: GPQPQLFSMTPS*FGAETWETLTH Trigger: ATGTGTAAGAGTCTCCCAGGTCTCTGCTCCAAACCATGAAGGGGTCATGGAGAACAGCTGAGGCTGGGGGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000077954.13 |
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| 3UTR CCA 72 bp | CAGGTGCAGCTGTCCTTGGTGGTTGTCGCGTGGTACTaGCACCTCCAAAATGCTGGGGTCTCTGCTGCATTT | + |
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Preference number: 3 (lower is better) Translates to: QVQLSLVVVAWY*HLQNAGVSAAF Trigger: AAATGCAGCAGAGACCCCAGCATTTTGGAGGTGCCAGTACCACGCGACAACCACCAAGGACAGCTGCACCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077954.13 |
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| 3UTR CCA 72 bp | AGGCTAGCTTCACTCTGCAGGTGCAGCTGTCCTTGGTaGTTGTCGCGTGGTACTGGCACCTCCAAAATGCTG | + |
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Preference number: 3 (lower is better) Translates to: RLASLCRCSCPW*LSRGTGTSKML Trigger: CAGCATTTTGGAGGTGCCAGTACCACGCGACAACCACCAAGGACAGCTGCACCTGCAGAGTGAAGCTAGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077954.13 |
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| 3UTR GCA 72 bp | ATGGAGGTAAGGACTGAAGCAGAGGCCGTGGAGGAGTaGTGCTTACTGTCCACACACTGCATGCATCCACAC | + |
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Preference number: 3 (lower is better) Translates to: MEVRTEAEAVEE*CLLSTHCMHPH Trigger: GTGTGGATGCATGCAGTGTGTGGACAGTAAGCAGCACTCCTCCACGGCCTCTGCTTCAGTCCTTACCTCCAT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077954.13 |
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| 3UTR GCA 72 bp | CTTGGTGGTTGTCGCGTGGTACTGGCACCTCCAAAATaGTGGGGTCTCTGCTGCATTTGGATGGCTCCTTCA | + |
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Preference number: 3 (lower is better) Translates to: LGGCRVVLAPPK*WGLCCIWMAPS Trigger: TGAAGGAGCCATCCAAATGCAGCAGAGACCCCAGCATTTTGGAGGTGCCAGTACCACGCGACAACCACCAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077954.13 |
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| 3UTR CCA 72 bp | GGTGGTTGTCGCGTGGTACTGGCACCTCCAAAATGCTaGGGTCTCTGCTGCATTTGGATGGCTCCTTCACTA | + |
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Preference number: 3 (lower is better) Translates to: GGCRVVLAPPKC*GLCCIWMAPSL Trigger: TAGTGAAGGAGCCATCCAAATGCAGCAGAGACCCCAGCATTTTGGAGGTGCCAGTACCACGCGACAACCACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077954.13 |
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| 3UTR GCA 72 bp | GAGGTAAGGACTGAAGCAGAGGCCGTGGAGGAGTGCTaGTTACTGTCCACACACTGCATGCATCCACACATT | + |
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Preference number: 3 (lower is better) Translates to: EVRTEAEAVEEC*LLSTHCMHPHI Trigger: AATGTGTGGATGCATGCAGTGTGTGGACAGTAAGCAGCACTCCTCCACGGCCTCTGCTTCAGTCCTTACCTC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077954.13 |
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| 3UTR CCA 72 bp | AGCTGCACCCAGCCTCTCGTGTTTGTAGAAGTTGCATaGCTGGTTCCAAACAGCTTCACCCCTTCTTCCCTG | + |
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Preference number: 3 (lower is better) Translates to: SCTQPLVFVEVA*LVPNSFTPSSL Trigger: CAGGGAAGAAGGGGTGAAGCTGTTTGGAACCAGCCATGCAACTTCTACAAACACGAGAGGCTGGGTGCAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077954.13 |
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| 3UTR CCA 72 bp | GCAGCCTTCTTCCCTGGCTCTGCCATCCACAGCACATaGGACTTATCTTCTAGACTCAGGCTAGCTTCACTC | + |
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Preference number: 3 (lower is better) Translates to: AAFFPGSAIHST*DLSSRLRLASL Trigger: GAGTGAAGCTAGCCTGAGTCTAGAAGATAAGTCCCATGTGCTGTGGATGGCAGAGCCAGGGAAGAAGGCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077954.13 |
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| 3UTR CCA 72 bp | CATTCAGACCTCCAGTGTCCATTCTACAGGCTGCTGTaGGAGGTGGAGCCTCCATTTTGCTGTTTTCCCTGG | + |
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Preference number: 3 (lower is better) Translates to: HSDLQCPFYRLL*EVEPPFCCFPW Trigger: CCAGGGAAAACAGCAAAATGGAGGCTCCACCTCCCACAGCAGCCTGTAGAATGGACACTGGAGGTCTGAATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077954.13 |
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| 3UTR TCA 72 bp | ATGGACTGTTCCCTCAGTGTCAACACACAGGGAAGCTaGGATCCAGAGTGGTGCAAGGCACTTCGGGACATT | + |
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Preference number: 3 (lower is better) Translates to: MDCSLSVNTQGS*DPEWCKALRDI Trigger: AATGTCCCGAAGTGCCTTGCACCACTCTGGATCTCAGCTTCCCTGTGTGTTGACACTGAGGGAACAGTCCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077954.13 |
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| 3UTR CCA 72 bp | CCAGCCTCAGCTGTTCTCCATGACCCCTTCATGGTTTaGAGCAGAGACCTGGGAGACTCTTACACATTACCA | + |
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Preference number: 3 (lower is better) Translates to: PASAVLHDPFMV*SRDLGDSYTLP Trigger: TGGTAATGTGTAAGAGTCTCCCAGGTCTCTGCTCCAAACCATGAAGGGGTCATGGAGAACAGCTGAGGCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077954.13 |
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| 3UTR CCA 72 bp | GGATGGGTTCTGTTCAGGACCCCTGACCCTGCCACATaGTGCCTGTATGAGTCCTTTAATACTGGGACTTCT | + |
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Preference number: 3 (lower is better) Translates to: GWVLFRTPDPAT*CLYESFNTGTS Trigger: AGAAGTCCCAGTATTAAAGGACTCATACAGGCACCATGTGGCAGGGTCAGGGGTCCTGAACAGAACCCATCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077954.13 |
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| 3UTR GCA 72 bp | TGGGTTCTGTTCAGGACCCCTGACCCTGCCACATGGTaGCTGTATGAGTCCTTTAATACTGGGACTTCTACT | + |
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Preference number: 3 (lower is better) Translates to: WVLFRTPDPATW*LYESFNTGTST Trigger: AGTAGAAGTCCCAGTATTAAAGGACTCATACAGGCACCATGTGGCAGGGTCAGGGGTCCTGAACAGAACCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077954.13 |
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| 3UTR CCA 72 bp | ATTTGGATGGCTCCTTCACTAGAAACTTCACTAGGATaGGTTCTGTTCAGGACCCCTGACCCTGCCACATGG | + |
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Preference number: 3 (lower is better) Translates to: IWMAPSLETSLG*VLFRTPDPATW Trigger: CCATGTGGCAGGGTCAGGGGTCCTGAACAGAACCCATCCTAGTGAAGTTTCTAGTGAAGGAGCCATCCAAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077954.13 |
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| 3UTR CCA 72 bp | CTGGCACCTCCAAAATGCTGGGGTCTCTGCTGCATTTaGATGGCTCCTTCACTAGAAACTTCACTAGGATGG | + |
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Preference number: 3 (lower is better) Translates to: LAPPKCWGLCCI*MAPSLETSLGW Trigger: CCATCCTAGTGAAGTTTCTAGTGAAGGAGCCATCCAAATGCAGCAGAGACCCCAGCATTTTGGAGGTGCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077954.13 |
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| 3UTR-3UTR CAA 90 bp | GAGGCCGTGGAGGAGTGCTGCTTACTGTCCACACACTGCATGCATCCACACATTAACCTTGGAGATCTCTaGGTGAAATCTGACACATTG | + |
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Preference number: 3 (lower is better) Translates to: EAVEECCLLSTHCMHPHINLGDL*VKSDTL Trigger: CAATGTGTCAGATTTCACCAAGAGATCTCCAAGGTT...AATGTGTGGATGCATGCAGTGTGTGGACAGTAAGCAGCACTCCTCCACGGCCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077954.13 |
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| 3UTR-3UTR CAA 90 bp | AGGCACTTCGGGACATTTTGCCTCAGTGATACTGGCCCTTTCTTACTCACAGCTCCTGATCATGTGTTTTaGAGGGATTCAAAGGTCCTT | + |
|
Preference number: 3 (lower is better) Translates to: RHFGTFCLSDTGPFLLTAPDHVF*RDSKVL Trigger: AAGGACCTTTGAATCCCTCAAAAACACATGATCAGG...AGCTGTGAGTAAGAAAGGGCCAGTATCACTGAGGCAAAATGTCCCGAAGTGCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077954.13 |
||
| 3UTR TCA 72 bp | GTTAATCTCAGTAGTTACCTGAGACCTTGGGCCTCATaGCTGGCTAGCCTGAGTCTTTGTCACCAAGAATTT | + |
|
Preference number: 3 (lower is better) Translates to: VNLSSYLRPWAS*LASLSLCHQEF Trigger: AAATTCTTGGTGACAAAGACTCAGGCTAGCCAGTCATGAGGCCCAAGGTCTCAGGTAACTACTGAGATTAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077954.13 |
||
| 3UTR TCA 72 bp | GAGTACTATAAATTGTTTCCAGGTGGCAACTCAGCGTaGGAGATCTGGAGAGAGGCTGGAAAGATGAATACA | + |
|
Preference number: 3 (lower is better) Translates to: EYYKLFPGGNSA*EIWREAGKMNT Trigger: TGTATTCATCTTTCCAGCCTCTCTCCAGATCTCTCACGCTGAGTTGCCACCTGGAAACAATTTATAGTACTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077954.13 |
||
| 3UTR TCA 72 bp | ACCACAAATTACCTACAAACCTTGGAGATCTCTTGGTaGAATCTGACACATTGCACTCAGCTGAAGGGAGCA | + |
|
Preference number: 3 (lower is better) Translates to: TTNYLQTLEISW*NLTHCTQLKGA Trigger: TGCTCCCTTCAGCTGAGTGCAATGTGTCAGATTTCACCAAGAGATCTCCAAGGTTTGTAGGTAATTTGTGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077954.13 |
||
| 3UTR CCA 72 bp | GTGTACATTGAAATATCTGACACAAAAACGGAGGAGTaGCTTCAAAGGACTGACAGGAACCAGGTAGTGTTT | + |
|
Preference number: 3 (lower is better) Translates to: VYIEISDTKTEE*LQRTDRNQVVF Trigger: AAACACTACCTGGTTCCTGTCAGTCCTTTGAAGCCACTCCTCCGTTTTTGTGTCAGATATTTCAATGTACAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077954.13 |
||
| CDS-3UTR GCA 90 bp | CCTCCAGCTCCAATCCAGCTGCTGGACATGAAGGCTGAGGCCACAGCCGTCGTCCGCGCAGTCTGCCTGTaGCAACCACAACGTCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: PPAPIQLLDMKAEATAVVRAVCL*QPQRPA Trigger: AGCAGGACGTTGTGGTTGGCACAGGCAGACTGCGCG...GACGACGGCTGTGGCCTCAGCCTTCATGTCCAGCAGCTGGATTGGAGCTGGAGG 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077954.13 ENSMUST00000121148.8 |
||
| CDS-3UTR GCA 90 bp | CCTCCAGCTCCAATCCAGCTGCTGGACATGAAGGCTGAGGCCACAGCCGTCGTCCCCTTGGGGCATCCATaGTTAGACTCCGAGTTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: PPAPIQLLDMKAEATAVVPLGHP*LDSELG Trigger: CCCCAACTCGGAGTCTAAGCATGGATGCCCCAAGGG...GACGACGGCTGTGGCCTCAGCCTTCATGTCCAGCAGCTGGATTGGAGCTGGAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000077954.13 ENSMUST00000121148.8 |
||
| CDS-3UTR TCA 90 bp | CCAGCTCCAATCCAGCTGCTGGACATGAAGGCTGAGGCCACAGCCGTCGTCTCACTGCAGAAGCAGAGATaGGTCCACTCTGGAGCGTAT | + |
|
Preference number: 4 (lower is better) Translates to: PAPIQLLDMKAEATAVVSLQKQR*VHSGAY Trigger: ATACGCTCCAGAGTGGACTCATCTCTGCTTCTGCAG...TGAGACGACGGCTGTGGCCTCAGCCTTCATGTCCAGCAGCTGGATTGGAGCTGG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077954.13 ENSMUST00000121148.8 |
||
| CDS-3UTR TCA 90 bp | GTTCCAAACAGCTTCACCCCTTCTTCCCTGTACGTGGAAGCCAGCACTAGGCCTCTTTCACCCGGCCTGTaGCCTCCCCTTCTGAGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: VPNSFTPSSLYVEASTRPLSPGL*PPLLSC Trigger: GCAACTCAGAAGGGGAGGTCACAGGCCGGGTGAAAG...AGGCCTAGTGCTGGCTTCCACGTACAGGGAAGAAGGGGTGAAGCTGTTTGGAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077954.13 |
||
| CDS-3UTR TCA 90 bp | CCTCCAGCTCCAATCCAGCTGCTGGACATGAAGGCTGAGGCCACAGCCGTCGTCCACTACTCTGCAAGATaGTGTCCATCTGAGAGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: PPAPIQLLDMKAEATAVVHYSAR*CPSERG Trigger: CCCTCTCTCAGATGGACATCATCTTGCAGAGTAGTG...GACGACGGCTGTGGCCTCAGCCTTCATGTCCAGCAGCTGGATTGGAGCTGGAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077954.13 ENSMUST00000121148.8 |
||
| CDS-3UTR GCA 90 bp | TTAGCAATGAGCCCTCCAGCTCCAATCCAGCTGCTGGACATGAAGGCTGAGGCCCCCTTGGGGCATCCATaGTTAGACTCCGAGTTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: LAMSPPAPIQLLDMKAEAPLGHP*LDSELG Trigger: CCCCAACTCGGAGTCTAAGCATGGATGCCCCAAGGG...GGCCTCAGCCTTCATGTCCAGCAGCTGGATTGGAGCTGGAGGGCTCATTGCTAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000077954.13 ENSMUST00000121148.8 |
||
| CDS-3UTR TCA 90 bp | GCAATGAGCCCTCCAGCTCCAATCCAGCTGCTGGACATGAAGGCTGAGGCCACACACTACTCTGCAAGATaGTGTCCATCTGAGAGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: AMSPPAPIQLLDMKAEATHYSAR*CPSERG Trigger: CCCTCTCTCAGATGGACATCATCTTGCAGAGTAGTG...TGTGGCCTCAGCCTTCATGTCCAGCAGCTGGATTGGAGCTGGAGGGCTCATTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077954.13 ENSMUST00000121148.8 |
||
| CDS-3UTR GCA 90 bp | GAGGCCGTGGAGGAGTGCTGCTTACTGTCCACACACTGCATGCATCCACACATTCTGTTACGCGCAGTCTaGCTGTGCCAACCACAACGT | + |
|
Preference number: 4 (lower is better) Translates to: EAVEECCLLSTHCMHPHILLRAV*LCQPQR Trigger: ACGTTGTGGTTGGCACAGGCAGACTGCGCGTAACAG...AATGTGTGGATGCATGCAGTGTGTGGACAGTAAGCAGCACTCCTCCACGGCCTC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077954.13 |
||
| CDS-3UTR CCA 90 bp | GCAATGAGCCCTCCAGCTCCAATCCAGCTGCTGGACATGAAGGCTGAGGCCACACCTAAGGTCTTGAAATaGGTCAGCTCTGACAAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: AMSPPAPIQLLDMKAEATPKVLK*VSSDKG Trigger: CCCCTTGTCAGAGCTGACCCATTTCAAGACCTTAGG...TGTGGCCTCAGCCTTCATGTCCAGCAGCTGGATTGGAGCTGGAGGGCTCATTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077954.13 ENSMUST00000121148.8 |
||
| CDS-3UTR CCA 90 bp | CCAGCTCCAATCCAGCTGCTGGACATGAAGGCTGAGGCCACAGCCGTCGTCTCATCCCCTGCTTCAACTTaGTCAAACCCACAGTTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: PAPIQLLDMKAEATAVVSSPAST*SNPQFQ Trigger: CTGAAACTGTGGGTTTGACCAAGTTGAAGCAGGGGA...TGAGACGACGGCTGTGGCCTCAGCCTTCATGTCCAGCAGCTGGATTGGAGCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077954.13 ENSMUST00000121148.8 |
||
| CDS-3UTR TCA 90 bp | CCAGCTCCAATCCAGCTGCTGGACATGAAGGCTGAGGCCACAGCCGTCGTCTCATCTTCAGAATTGATCTaGAAGTGCTGGCTCTGGACT | + |
|
Preference number: 4 (lower is better) Translates to: PAPIQLLDMKAEATAVVSSSELI*KCWLWT Trigger: AGTCCAGAGCCAGCACTTTCAGATCAATTCTGAAGA...TGAGACGACGGCTGTGGCCTCAGCCTTCATGTCCAGCAGCTGGATTGGAGCTGG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077954.13 ENSMUST00000121148.8 |
||
| CDS-3UTR TCA 90 bp | CCAGCTCCAATCCAGCTGCTGGACATGAAGGCTGAGGCCACAGCCGTCGTCTCATGCCATCTTCAGAATTaGTCTGAAAGTGCTGGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: PAPIQLLDMKAEATAVVSCHLQN*SESAGS Trigger: AGAGCCAGCACTTTCAGATCAATTCTGAAGATGGCA...TGAGACGACGGCTGTGGCCTCAGCCTTCATGTCCAGCAGCTGGATTGGAGCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077954.13 ENSMUST00000121148.8 |
||
| CDS-3UTR TCA 90 bp | TTAGCAATGAGCCCTCCAGCTCCAATCCAGCTGCTGGACATGAAGGCTGAGGCCAAGGGGTGTCTCCACTaGGTGTTCAAAAAGAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LAMSPPAPIQLLDMKAEAKGCLH*VFKKSS Trigger: GGAGCTCTTTTTGAACACTCAGTGGAGACACCCCTT...GGCCTCAGCCTTCATGTCCAGCAGCTGGATTGGAGCTGGAGGGCTCATTGCTAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000077954.13 ENSMUST00000121148.8 |
||
| CDS-3UTR TCA 90 bp | TCTAAGTGTTTTAGCAATGAGCCCTCCAGCTCCAATCCAGCTGCTGGACATGAACTTTCACCCGGCCTGTaGCCTCCCCTTCTGAGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: SKCFSNEPSSSNPAAGHELSPGL*PPLLSC Trigger: GCAACTCAGAAGGGGAGGTCACAGGCCGGGTGAAAG...TTCATGTCCAGCAGCTGGATTGGAGCTGGAGGGCTCATTGCTAAAACACTTAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000077954.13 ENSMUST00000121148.8 |
||
| CDS-3UTR TCA 90 bp | AAGTGTTTTAGCAATGAGCCCTCCAGCTCCAATCCAGCTGCTGGACATGAAGGCGAAATGGGTCAGCTCTaGCAAGGGGTGTCTCCACTG | + |
|
Preference number: 4 (lower is better) Translates to: KCFSNEPSSSNPAAGHEGEMGQL*QGVSPL Trigger: CAGTGGAGACACCCCTTGTCAGAGCTGACCCATTTC...GCCTTCATGTCCAGCAGCTGGATTGGAGCTGGAGGGCTCATTGCTAAAACACTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000077954.13 ENSMUST00000121148.8 |
||
| CDS-3UTR GCA 90 bp | GCTCCAATCCAGCTGCTGGACATGAAGGCTGAGGCCACAGCCGTCGTCTCACCATCCTCCATCCGTAAATaGCAATCTTGTAGATGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: APIQLLDMKAEATAVVSPSSIRK*QSCRCA Trigger: AGCACATCTACAAGATTGGCATTTACGGATGGAGGA...TGGTGAGACGACGGCTGTGGCCTCAGCCTTCATGTCCAGCAGCTGGATTGGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077954.13 ENSMUST00000121148.8 |
||
| CDS-3UTR TCA 90 bp | CTTCTAAGTGTTTTAGCAATGAGCCCTCCAGCTCCAATCCAGCTGCTGGACATGCTGAGTTGCGAGCACTaGCTGTCACGTTCTGGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: LLSVLAMSPPAPIQLLDMLSCEH*LSRSGL Trigger: CAACCCAGAACGTGACAGTCAGTGCTCGCAACTCAG...CATGTCCAGCAGCTGGATTGGAGCTGGAGGGCTCATTGCTAAAACACTTAGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077954.13 ENSMUST00000121148.8 |
||
| CDS-3UTR TCA 90 bp | CTGGGAGATGAAGGCCCTGGGGCACCAGCTAAAGATGTCAAATTAGCACCAGGTAAGGGGTGTCTCCACTaGGTGTTCAAAAAGAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LGDEGPGAPAKDVKLAPGKGCLH*VFKKSS Trigger: GGAGCTCTTTTTGAACACTCAGTGGAGACACCCCTT...ACCTGGTGCTAATTTGACATCTTTAGCTGGTGCCCCAGGGCCTTCATCTCCCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000077954.13 |
||
| CDS-3UTR TCA 90 bp | TGCATGCTTCTAAGTGTTTTAGCAATGAGCCCTCCAGCTCCAATCCAGCTGCTGGAAATGGGTCAGCTCTaGCAAGGGGTGTCTCCACTG | + |
|
Preference number: 4 (lower is better) Translates to: CMLLSVLAMSPPAPIQLLEMGQL*QGVSPL Trigger: CAGTGGAGACACCCCTTGTCAGAGCTGACCCATTTC...CAGCAGCTGGATTGGAGCTGGAGGGCTCATTGCTAAAACACTTAGAAGCATGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000077954.13 ENSMUST00000121148.8 |
||
| CDS-3UTR TCA 90 bp | TTAGCAATGAGCCCTCCAGCTCCAATCCAGCTGCTGGACATGAAGGCTGAGGCCTCTAACCTAAGGTCTTaGAATGGGTCAGCTCTGACA | + |
|
Preference number: 4 (lower is better) Translates to: LAMSPPAPIQLLDMKAEASNLRS*NGSALT Trigger: TGTCAGAGCTGACCCATTTCAAGACCTTAGGTTAGA...GGCCTCAGCCTTCATGTCCAGCAGCTGGATTGGAGCTGGAGGGCTCATTGCTAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077954.13 ENSMUST00000121148.8 |
||
| CDS-3UTR CCA 90 bp | AGGCACTTCGGGACATTTTGCCTCAGTGATACTGGCCCTTTCTTACTCACAGCTTGGACTTCTACCATCTaGGCACCCACTTTCACCCGG | + |
|
Preference number: 4 (lower is better) Translates to: RHFGTFCLSDTGPFLLTAWTSTI*APTFTR Trigger: CCGGGTGAAAGTGGGTGCCCAGATGGTAGAAGTCCA...AGCTGTGAGTAAGAAAGGGCCAGTATCACTGAGGCAAAATGTCCCGAAGTGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077954.13 |
||
| CDS-3UTR CCA 90 bp | TGCATGCTTCTAAGTGTTTTAGCAATGAGCCCTCCAGCTCCAATCCAGCTGCTGTGGACTTCTACCATCTaGGCACCCACTTTCACCCGG | + |
|
Preference number: 4 (lower is better) Translates to: CMLLSVLAMSPPAPIQLLWTSTI*APTFTR Trigger: CCGGGTGAAAGTGGGTGCCCAGATGGTAGAAGTCCA...CAGCAGCTGGATTGGAGCTGGAGGGCTCATTGCTAAAACACTTAGAAGCATGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077954.13 ENSMUST00000121148.8 |
||
| CDS-3UTR CCA 90 bp | GAGGCCGTGGAGGAGTGCTGCTTACTGTCCACACACTGCATGCATCCACACATTTCCCCTGCTTCAACTTaGTCAAACCCACAGTTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: EAVEECCLLSTHCMHPHISPAST*SNPQFQ Trigger: CTGAAACTGTGGGTTTGACCAAGTTGAAGCAGGGGA...AATGTGTGGATGCATGCAGTGTGTGGACAGTAAGCAGCACTCCTCCACGGCCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077954.13 |
||
| CDS-3UTR TCA 90 bp | GTAGTTGGTGTTTTGGCTGCAGAGCTCTCTCCAAGGGAAAATGACCAGACCAATCTGAGTTGCGAGCACTaGCTGTCACGTTCTGGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: VVGVLAAELSPRENDQTNLSCEH*LSRSGL Trigger: CAACCCAGAACGTGACAGTCAGTGCTCGCAACTCAG...ATTGGTCTGGTCATTTTCCCTTGGAGAGAGCTCTGCAGCCAAAACACCAACTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077954.13 |
||
| CDS-3UTR TCA 90 bp | GATGAAGGCCCTGGGGCACCAGCTAAAGATGTCAAATTAGCACCAGGTATCTATCTGCAGAAGCAGAGATaGGTCCACTCTGGAGCGTAT | + |
|
Preference number: 4 (lower is better) Translates to: DEGPGAPAKDVKLAPGIYLQKQR*VHSGAY Trigger: ATACGCTCCAGAGTGGACTCATCTCTGCTTCTGCAG...ATAGATACCTGGTGCTAATTTGACATCTTTAGCTGGTGCCCCAGGGCCTTCATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077954.13 |
||
| CDS-3UTR TCA 90 bp | CTGGGAGATGAAGGCCCTGGGGCACCAGCTAAAGATGTCAAATTAGCACCAGGTTCTAACCTAAGGTCTTaGAATGGGTCAGCTCTGACA | + |
|
Preference number: 4 (lower is better) Translates to: LGDEGPGAPAKDVKLAPGSNLRS*NGSALT Trigger: TGTCAGAGCTGACCCATTTCAAGACCTTAGGTTAGA...ACCTGGTGCTAATTTGACATCTTTAGCTGGTGCCCCAGGGCCTTCATCTCCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077954.13 |
||
| CDS-3UTR TCA 90 bp | AGTGTTTTAGCAATGAGCCCTCCAGCTCCAATCCAGCTGCTGGACATGAAGGCTTCTTCAGAATTGATCTaGAAGTGCTGGCTCTGGACT | + |
|
Preference number: 4 (lower is better) Translates to: SVLAMSPPAPIQLLDMKASSELI*KCWLWT Trigger: AGTCCAGAGCCAGCACTTTCAGATCAATTCTGAAGA...AGCCTTCATGTCCAGCAGCTGGATTGGAGCTGGAGGGCTCATTGCTAAAACACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077954.13 ENSMUST00000121148.8 |
||
| CDS-3UTR CCA 90 bp | TTAGCAATGAGCCCTCCAGCTCCAATCCAGCTGCTGGACATGAAGGCTGAGGCCTGGAGCGTATTTCTTTaGCATACAGCGGAAATAAAA | + |
|
Preference number: 4 (lower is better) Translates to: LAMSPPAPIQLLDMKAEAWSVFL*HTAEIK Trigger: TTTTATTTCCGCTGTATGCCAAAGAAATACGCTCCA...GGCCTCAGCCTTCATGTCCAGCAGCTGGATTGGAGCTGGAGGGCTCATTGCTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077954.13 ENSMUST00000121148.8 |
||
| CDS-3UTR CCA 90 bp | GATGAAGGCCCTGGGGCACCAGCTAAAGATGTCAAATTAGCACCAGGTATCTATCCTAAGGTCTTGAAATaGGTCAGCTCTGACAAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: DEGPGAPAKDVKLAPGIYPKVLK*VSSDKG Trigger: CCCCTTGTCAGAGCTGACCCATTTCAAGACCTTAGG...ATAGATACCTGGTGCTAATTTGACATCTTTAGCTGGTGCCCCAGGGCCTTCATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077954.13 |
||
| 3UTR CAA 72 bp | CAGGTATCTATGCATTCAGCTGCTGTAGTTGGTGTTTaGGCTGCAGAGCTCTCTCCAAGGGAAAATGACCAG | + |
|
Preference number: 4 (lower is better) Translates to: QVSMHSAAVVGV*AAELSPRENDQ Trigger: CTGGTCATTTTCCCTTGGAGAGAGCTCTGCAGCCAAAACACCAACTACAGCAGCTGAATGCATAGATACCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077954.13 |
||
| CDS-3UTR GCA 90 bp | AGTGTCCATTCTACAGGCTGCTGTGGGAGGTGGAGCCTCCATTTTGCTGTTTTCTCCTCCATCCGTAAATaGCAATCTTGTAGATGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: SVHSTGCCGRWSLHFAVFSSIRK*QSCRCA Trigger: AGCACATCTACAAGATTGGCATTTACGGATGGAGGA...GAAAACAGCAAAATGGAGGCTCCACCTCCCACAGCAGCCTGTAGAATGGACACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077954.13 |
||
| CDS-3UTR GCA 90 bp | ATGAAACACCATGATCAAAAGCAACCCAGGGAGGAAAGAGTTTATTTTAGCTTACGCGCAGTCTGCCTGTaGCAACCACAACGTCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: MKHHDQKQPREERVYFSLRAVCL*QPQRPA Trigger: AGCAGGACGTTGTGGTTGGCACAGGCAGACTGCGCG...TAAGCTAAAATAAACTCTTTCCTCCCTGGGTTGCTTTTGATCATGGTGTTTCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077954.13 |
||
| 3UTR CAA 72 bp | AGCCAGCCATGTTTGGGAGGAGATAGATGTCTGCCGTaGAGTACTATAAATTGTTTCCAGGTGGCAACTCAG | + |
|
Preference number: 4 (lower is better) Translates to: SQPCLGGDRCLP*STINCFQVATQ Trigger: CTGAGTTGCCACCTGGAAACAATTTATAGTACTCAACGGCAGACATCTATCTCCTCCCAAACATGGCTGGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077954.13 |
||
| CDS-3UTR TCA 90 bp | AAAGAGTTTATTTTAGCTTACATGTCCCCGTCACAATCTGTTGTGAAGGGAAGTTGTGACCTCCCCTTCTaGGTTGCGAGCACTGACTGT | + |
|
Preference number: 4 (lower is better) Translates to: KEFILAYMSPSQSVVKGSCDLPF*VASTDC Trigger: ACAGTCAGTGCTCGCAACTCAGAAGGGGAGGTCACA...ACTTCCCTTCACAACAGATTGTGACGGGGACATGTAAGCTAAAATAAACTCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000077954.13 |
||
| CDS-3UTR CCA 90 bp | CTTCTAAGTGTTTTAGCAATGAGCCCTCCAGCTCCAATCCAGCTGCTGGACATGGTGACCCATTCCTATTaGAGAAAACCACATCACTTT | + |
|
Preference number: 4 (lower is better) Translates to: LLSVLAMSPPAPIQLLDMVTHSY*RKPHHF Trigger: AAAGTGATGTGGTTTTCTCCAATAGGAATGGGTCAC...CATGTCCAGCAGCTGGATTGGAGCTGGAGGGCTCATTGCTAAAACACTTAGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000077954.13 ENSMUST00000121148.8 |
||
| CDS-3UTR CCA 90 bp | CTTCTAAGTGTTTTAGCAATGAGCCCTCCAGCTCCAATCCAGCTGCTGGACATGTGGAGCGTATTTCTTTaGCATACAGCGGAAATAAAA | + |
|
Preference number: 4 (lower is better) Translates to: LLSVLAMSPPAPIQLLDMWSVFL*HTAEIK Trigger: TTTTATTTCCGCTGTATGCCAAAGAAATACGCTCCA...CATGTCCAGCAGCTGGATTGGAGCTGGAGGGCTCATTGCTAAAACACTTAGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077954.13 ENSMUST00000121148.8 |
||
| CDS-3UTR TCA 90 bp | ATGAATACAGTGAATATGTTCCTGGTGTTTCTTTTGTGTCGTTCTGAAGCCAGGTGCCATCTTCAGAATTaGTCTGAAAGTGCTGGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: MNTVNMFLVFLLCRSEARCHLQN*SESAGS Trigger: AGAGCCAGCACTTTCAGATCAATTCTGAAGATGGCA...CCTGGCTTCAGAACGACACAAAAGAAACACCAGGAACATATTCACTGTATTCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077954.13 |
||
| CDS-3UTR CCA 90 bp | ACCAATTTCTGTCTCACAGTTTCTAACGCTGTGATGAAACACCATGATCAAAAGGAGATGAGTCCACTCTaGAGCGTATTTCTTTGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: TNFCLTVSNAVMKHHDQKEMSPL*SVFLWH Trigger: ATGCCAAAGAAATACGCTCCAGAGTGGACTCATCTC...CTTTTGATCATGGTGTTTCATCACAGCGTTAGAAACTGTGAGACAGAAATTGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077954.13 |
||
| CDS-3UTR CCA 90 bp | ACCAATTTCTGTCTCACAGTTTCTAACGCTGTGATGAAACACCATGATCAAAAGGTGACCCATTCCTATTaGAGAAAACCACATCACTTT | + |
|
Preference number: 4 (lower is better) Translates to: TNFCLTVSNAVMKHHDQKVTHSY*RKPHHF Trigger: AAAGTGATGTGGTTTTCTCCAATAGGAATGGGTCAC...CTTTTGATCATGGTGTTTCATCACAGCGTTAGAAACTGTGAGACAGAAATTGGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077954.13 |
||
| 3UTR CAA 72 bp | ATTCAAAATCATATGGCCAGACCTGATCATGTGTTTTaGAGGGATTCAAAGGTCCTTCTGAAACTTTACAAT | + |
|
Preference number: 4 (lower is better) Translates to: IQNHMARPDHVF*RDSKVLLKLYN Trigger: ATTGTAAAGTTTCAGAAGGACCTTTGAATCCCTCAAAAACACATGATCAGGTCTGGCCATATGATTTTGAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077954.13 |
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| CDS-3UTR CAA 90 bp | GCAATGAGCCCTCCAGCTCCAATCCAGCTGCTGGACATGAAGGCTGAGGCCACAACCTCCCCTTCTGAGTaGCGAGCACTGACTGTCACG | + |
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Preference number: 5 (lower is better) Translates to: AMSPPAPIQLLDMKAEATTSPSE*RALTVT Trigger: CGTGACAGTCAGTGCTCGCAACTCAGAAGGGGAGGT...TGTGGCCTCAGCCTTCATGTCCAGCAGCTGGATTGGAGCTGGAGGGCTCATTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077954.13 ENSMUST00000121148.8 |
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| CDS GCA 90 bp | GTTCAAAAAGAGCTCCTTCTGGCCCTGTTACGCGCAGTCTGCCTGTaGCAACCACAACGTCCTGCTCCTCCGCAGAGAACAGTGGCTTGC | + |
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Preference number: 5 (lower is better) Translates to: VQKELLLALLRAVCL*QPQRPAPPQRTVAC Trigger: GCAAGCCACTGTTCTCTGCGGAGGAGCAGGACGTTGTGGTTGGCACAGGCAGACTGCGCGTAACAGGGCCAGAAGGAGCTCTTTTTGAAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000077954.13 ENSMUST00000121148.8 |
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| CDS GCA 90 bp | TCTGGCCCTGTTACGCGCAGTCTGCCTGTGCCAACCACAACGTCCTaGTCCTCCGCAGAGAACAGTGGCTTGCCATCTTCAGAATTGATC | + |
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Preference number: 5 (lower is better) Translates to: SGPVTRSLPVPTTTS*SSAENSGLPSSELI Trigger: GATCAATTCTGAAGATGGCAAGCCACTGTTCTCTGCGGAGGAGCAGGACGTTGTGGTTGGCACAGGCAGACTGCGCGTAACAGGGCCAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077954.13 ENSMUST00000121148.8 |
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| CDS TCA 90 bp | CGTCCTGCTCCTCCGCAGAGAACAGTGGCTTGCCATCTTCAGAATTaGTCTGAAAGTGCTGGCTCTGGACTTCTACCATCTGGGCACCCA | + |
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Preference number: 5 (lower is better) Translates to: RPAPPQRTVACHLQN*SESAGSGLLPSGHP Trigger: TGGGTGCCCAGATGGTAGAAGTCCAGAGCCAGCACTTTCAGATCAATTCTGAAGATGGCAAGCCACTGTTCTCTGCGGAGGAGCAGGACG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077954.13 ENSMUST00000121148.8 |
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| CDS CCA 90 bp | CCTGTGACCTCCCCTTCTGAGTTGCGAGCACTGACTGTCACGTTCTaGGTTGACTGCAGAAGCAGAGATGAGTCCACTCTGGAGCGTATT | + |
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Preference number: 5 (lower is better) Translates to: PVTSPSELRALTVTF*VDCRSRDESTLERI Trigger: AATACGCTCCAGAGTGGACTCATCTCTGCTTCTGCAGTCAACCCAGAACGTGACAGTCAGTGCTCGCAACTCAGAAGGGGAGGTCACAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077954.13 ENSMUST00000121148.8 |
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| CDS-3UTR CAA 90 bp | AGCCCTCCAGCTCCAATCCAGCTGCTGGACATGAAGGCTGAGGCCACAGCCGTCCTGGAGCGTATTTCTTaGGCATACAGCGGAAATAAA | + |
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Preference number: 5 (lower is better) Translates to: SPPAPIQLLDMKAEATAVLERIS*AYSGNK Trigger: TTTATTTCCGCTGTATGCCAAAGAAATACGCTCCAG...GACGGCTGTGGCCTCAGCCTTCATGTCCAGCAGCTGGATTGGAGCTGGAGGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077954.13 ENSMUST00000121148.8 |
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| CDS-3UTR CAA 90 bp | CTTTGGGGGTCCATTTTCATTCAGACCTCCAGTGTCCATTCTACAGGCTGCTGTACCTCCCCTTCTGAGTaGCGAGCACTGACTGTCACG | + |
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Preference number: 5 (lower is better) Translates to: LWGSIFIQTSSVHSTGCCTSPSE*RALTVT Trigger: CGTGACAGTCAGTGCTCGCAACTCAGAAGGGGAGGT...ACAGCAGCCTGTAGAATGGACACTGGAGGTCTGAATGAAAATGGACCCCCAAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000077954.13 |
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| CDS TCA 90 bp | TGCTCCTCCGCAGAGAACAGTGGCTTGCCATCTTCAGAATTGATCTaGAAGTGCTGGCTCTGGACTTCTACCATCTGGGCACCCACTTTC | + |
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Preference number: 5 (lower is better) Translates to: CSSAENSGLPSSELI*KCWLWTSTIWAPTF Trigger: GAAAGTGGGTGCCCAGATGGTAGAAGTCCAGAGCCAGCACTTTCAGATCAATTCTGAAGATGGCAAGCCACTGTTCTCTGCGGAGGAGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077954.13 ENSMUST00000121148.8 |
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| CDS TCA 90 bp | CCTAAGGTCTTGAAATGGGTCAGCTCTGACAAGGGGTGTCTCCACTaGGTGTTCAAAAAGAGCTCCTTCTGGCCCTGTTACGCGCAGTCT | + |
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Preference number: 5 (lower is better) Translates to: PKVLKWVSSDKGCLH*VFKKSSFWPCYAQS Trigger: AGACTGCGCGTAACAGGGCCAGAAGGAGCTCTTTTTGAACACTCAGTGGAGACACCCCTTGTCAGAGCTGACCCATTTCAAGACCTTAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000077954.13 ENSMUST00000121148.8 |
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| CDS GCA 90 bp | GGAGAAGAACGAATAGGTATAGGCAGCGCTTCCTCCATCCGTAAATaGCAATCTTGTAGATGTGCTGGTTCTCGGGCCTCTCTATGTGAG | + |
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Preference number: 5 (lower is better) Translates to: GEERIGIGSASSIRK*QSCRCAGSRASLCE Trigger: CTCACATAGAGAGGCCCGAGAACCAGCACATCTACAAGATTGGCATTTACGGATGGAGGAAGCGCTGCCTATACCTATTCGTTCTTCTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077954.13 ENSMUST00000121148.8 |
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| CDS-3UTR CAA 90 bp | GATGAAGGCCCTGGGGCACCAGCTAAAGATGTCAAATTAGCACCAGGTATCTATCTGTCACGTTCTGGGTaGACTGCAGAAGCAGAGATG | + |
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Preference number: 5 (lower is better) Translates to: DEGPGAPAKDVKLAPGIYLSRSG*TAEAEM Trigger: CATCTCTGCTTCTGCAGTCAACCCAGAACGTGACAG...ATAGATACCTGGTGCTAATTTGACATCTTTAGCTGGTGCCCCAGGGCCTTCATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077954.13 |
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| CDS TCA 90 bp | TCCGACTCTCCTTCCAGGCGAAGTCCATCTGCTGTAACATGCAAGTaGCCCATTCCTATTGGAGAAAACCACATCACTTTCAGAATCCAG | + |
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Preference number: 5 (lower is better) Translates to: SDSPSRRSPSAVTCK*PIPIGENHITFRIQ Trigger: CTGGATTCTGAAAGTGATGTGGTTTTCTCCAATAGGAATGGGTCACTTGCATGTTACAGCAGATGGACTTCGCCTGGAAGGAGAGTCGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077954.13 ENSMUST00000121148.8 |
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| CDS-3UTR CAA 90 bp | AAGTGTTTTAGCAATGAGCCCTCCAGCTCCAATCCAGCTGCTGGACATGAAGGCAGTGACCCATTCCTATaGGAGAAAACCACATCACTT | + |
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Preference number: 5 (lower is better) Translates to: KCFSNEPSSSNPAAGHEGSDPFL*EKTTSL Trigger: AAGTGATGTGGTTTTCTCCAATAGGAATGGGTCACT...GCCTTCATGTCCAGCAGCTGGATTGGAGCTGGAGGGCTCATTGCTAAAACACTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000077954.13 ENSMUST00000121148.8 |
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| CDS CCA 90 bp | CAGGCGAAGTCCATCTGCTGTAACATGCAAGTGACCCATTCCTATTaGAGAAAACCACATCACTTTCAGAATCCAGATAGTGAGAGCGAG | + |
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Preference number: 5 (lower is better) Translates to: QAKSICCNMQVTHSY*RKPHHFQNPDSESE Trigger: CTCGCTCTCACTATCTGGATTCTGAAAGTGATGTGGTTTTCTCCAATAGGAATGGGTCACTTGCATGTTACAGCAGATGGACTTCGCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077954.13 ENSMUST00000121148.8 |
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| CDS CCA 90 bp | TTGACTGCAGAAGCAGAGATGAGTCCACTCTGGAGCGTATTTCTTTaGCATACAGCGGAAATAAAAATTCCGACTCTCCTTCCAGGCGAA | + |
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Preference number: 5 (lower is better) Translates to: LTAEAEMSPLWSVFL*HTAEIKIPTLLPGE Trigger: TTCGCCTGGAAGGAGAGTCGGAATTTTTATTTCCGCTGTATGCCAAAGAAATACGCTCCAGAGTGGACTCATCTCTGCTTCTGCAGTCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000077954.13 ENSMUST00000121148.8 |
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| CDS-3UTR CAA 90 bp | TCAGTGATACTGGCCCTTTCTTACTCACAGCTGACTCTTCAGCCTCTCATGATGCTGGAGCGTATTTCTTaGGCATACAGCGGAAATAAA | + |
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Preference number: 5 (lower is better) Translates to: SVILALSYSQLTLQPLMMLERIS*AYSGNK Trigger: TTTATTTCCGCTGTATGCCAAAGAAATACGCTCCAG...CATCATGAGAGGCTGAAGAGTCAGCTGTGAGTAAGAAAGGGCCAGTATCACTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077954.13 |
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| CDS-3UTR CAA 90 bp | ATGAATACAGTGAATATGTTCCTGGTGTTTCTTTTGTGTCGTTCTGAAGCCAGGAGTGACCCATTCCTATaGGAGAAAACCACATCACTT | + |
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Preference number: 5 (lower is better) Translates to: MNTVNMFLVFLLCRSEARSDPFL*EKTTSL Trigger: AAGTGATGTGGTTTTCTCCAATAGGAATGGGTCACT...CCTGGCTTCAGAACGACACAAAAGAAACACCAGGAACATATTCACTGTATTCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077954.13 |
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| CDS GCA 72 bp | GAGCTCCTTCTGGCCCTGTTACGCGCAGTCTGCCTGTaGCAACCACAACGTCCTGCTCCTCCGCAGAGAACA | + |
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Preference number: 6 (lower is better) Translates to: ELLLALLRAVCL*QPQRPAPPQRT Trigger: TGTTCTCTGCGGAGGAGCAGGACGTTGTGGTTGGCACAGGCAGACTGCGCGTAACAGGGCCAGAAGGAGCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077954.13 ENSMUST00000121148.8 |
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| CDS GCA 72 bp | CAAAAAGAGCTCCTTCTGGCCCTGTTACGCGCAGTCTaGCTGTGCCAACCACAACGTCCTGCTCCTCCGCAG | + |
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Preference number: 6 (lower is better) Translates to: QKELLLALLRAV*LCQPQRPAPPQ Trigger: CTGCGGAGGAGCAGGACGTTGTGGTTGGCACAGGCAGACTGCGCGTAACAGGGCCAGAAGGAGCTCTTTTTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000077954.13 ENSMUST00000121148.8 |
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| CDS CAA 72 bp | CCCACTTTCACCCGGCCTGTGACCTCCCCTTCTGAGTaGCGAGCACTGACTGTCACGTTCTGGGTTGACTGC | + |
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Preference number: 6 (lower is better) Translates to: PTFTRPVTSPSE*RALTVTFWVDC Trigger: GCAGTCAACCCAGAACGTGACAGTCAGTGCTCGCAACTCAGAAGGGGAGGTCACAGGCCGGGTGAAAGTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077954.13 ENSMUST00000121148.8 |
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| CDS CAA 90 bp | ATCTGGGCACCCACTTTCACCCGGCCTGTGACCTCCCCTTCTGAGTaGCGAGCACTGACTGTCACGTTCTGGGTTGACTGCAGAAGCAGA | + |
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Preference number: 6 (lower is better) Translates to: IWAPTFTRPVTSPSE*RALTVTFWVDCRSR Trigger: TCTGCTTCTGCAGTCAACCCAGAACGTGACAGTCAGTGCTCGCAACTCAGAAGGGGAGGTCACAGGCCGGGTGAAAGTGGGTGCCCAGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077954.13 ENSMUST00000121148.8 |
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| CDS GCA 72 bp | GTTACGCGCAGTCTGCCTGTGCCAACCACAACGTCCTaGTCCTCCGCAGAGAACAGTGGCTTGCCATCTTCA | + |
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Preference number: 6 (lower is better) Translates to: VTRSLPVPTTTS*SSAENSGLPSS Trigger: TGAAGATGGCAAGCCACTGTTCTCTGCGGAGGAGCAGGACGTTGTGGTTGGCACAGGCAGACTGCGCGTAAC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077954.13 ENSMUST00000121148.8 |
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| CDS GCA 72 bp | AATCCATTAGAGCTGCCAGCGGGACCCTGTGTCCCCTaGTTCAACTTGGTCAAACCCACAGTTTCAGCATCC | + |
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Preference number: 6 (lower is better) Translates to: NPLELPAGPCVP*FNLVKPTVSAS Trigger: GGATGCTGAAACTGTGGGTTTGACCAAGTTGAAGCAGGGGACACAGGGTCCCGCTGGCAGCTCTAATGGATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077954.13 ENSMUST00000121148.8 |
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| CDS CCA 72 bp | TCCCCTTCTGAGTTGCGAGCACTGACTGTCACGTTCTaGGTTGACTGCAGAAGCAGAGATGAGTCCACTCTG | + |
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Preference number: 6 (lower is better) Translates to: SPSELRALTVTF*VDCRSRDESTL Trigger: CAGAGTGGACTCATCTCTGCTTCTGCAGTCAACCCAGAACGTGACAGTCAGTGCTCGCAACTCAGAAGGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077954.13 ENSMUST00000121148.8 |
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| CDS TCA 72 bp | CATCCAGCACCAGCACTCCTTCACTACTCTGCAAGATaGTGTCCATCTGAGAGAGGGCCTCCAATTTCCCAG | + |
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Preference number: 6 (lower is better) Translates to: HPAPALLHYSAR*CPSERGPPISQ Trigger: CTGGGAAATTGGAGGCCCTCTCTCAGATGGACATCATCTTGCAGAGTAGTGAAGGAGTGCTGGTGCTGGATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077954.13 ENSMUST00000121148.8 |
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| CDS GCA 72 bp | GAGTTGCGAGCACTGACTGTCACGTTCTGGGTTGACTaGAGAAGCAGAGATGAGTCCACTCTGGAGCGTATT | + |
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Preference number: 6 (lower is better) Translates to: ELRALTVTFWVD*RSRDESTLERI Trigger: AATACGCTCCAGAGTGGACTCATCTCTGCTTCTGCAGTCAACCCAGAACGTGACAGTCAGTGCTCGCAACTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077954.13 ENSMUST00000121148.8 |
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| CDS GCA 72 bp | CGAATAGGTATAGGCAGCGCTTCCTCCATCCGTAAATaGCAATCTTGTAGATGTGCTGGTTCTCGGGCCTCT | + |
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Preference number: 6 (lower is better) Translates to: RIGIGSASSIRK*QSCRCAGSRAS Trigger: AGAGGCCCGAGAACCAGCACATCTACAAGATTGGCATTTACGGATGGAGGAAGCGCTGCCTATACCTATTCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077954.13 ENSMUST00000121148.8 |
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| CDS TCA 72 bp | CCTCCGCAGAGAACAGTGGCTTGCCATCTTCAGAATTaGTCTGAAAGTGCTGGCTCTGGACTTCTACCATCT | + |
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Preference number: 6 (lower is better) Translates to: PPQRTVACHLQN*SESAGSGLLPS Trigger: AGATGGTAGAAGTCCAGAGCCAGCACTTTCAGATCAATTCTGAAGATGGCAAGCCACTGTTCTCTGCGGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077954.13 ENSMUST00000121148.8 |
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| CDS TCA 72 bp | TTGAAATGGGTCAGCTCTGACAAGGGGTGTCTCCACTaGGTGTTCAAAAAGAGCTCCTTCTGGCCCTGTTAC | + |
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Preference number: 6 (lower is better) Translates to: LKWVSSDKGCLH*VFKKSSFWPCY Trigger: GTAACAGGGCCAGAAGGAGCTCTTTTTGAACACTCAGTGGAGACACCCCTTGTCAGAGCTGACCCATTTCAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000077954.13 ENSMUST00000121148.8 |
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| CDS TCA 72 bp | AGCACTCCTTCACTACTCTGCAAGATGATGTCCATCTaGGAGAGGGCCTCCAATTTCCCAGCGTTAGCTTTA | + |
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Preference number: 6 (lower is better) Translates to: STPSLLCKMMSI*ERASNFPALAL Trigger: TAAAGCTAACGCTGGGAAATTGGAGGCCCTCTCTCAGATGGACATCATCTTGCAGAGTAGTGAAGGAGTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077954.13 ENSMUST00000121148.8 |
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| CDS TCA 72 bp | CCTTCCAGGCGAAGTCCATCTGCTGTAACATGCAAGTaGCCCATTCCTATTGGAGAAAACCACATCACTTTC | + |
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Preference number: 6 (lower is better) Translates to: PSRRSPSAVTCK*PIPIGENHITF Trigger: GAAAGTGATGTGGTTTTCTCCAATAGGAATGGGTCACTTGCATGTTACAGCAGATGGACTTCGCCTGGAAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077954.13 ENSMUST00000121148.8 |
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| CDS CCA 72 bp | GAAGCAGAGATGAGTCCACTCTGGAGCGTATTTCTTTaGCATACAGCGGAAATAAAAATTCCGACTCTCCTT | + |
|
Preference number: 6 (lower is better) Translates to: EAEMSPLWSVFL*HTAEIKIPTLL Trigger: AAGGAGAGTCGGAATTTTTATTTCCGCTGTATGCCAAAGAAATACGCTCCAGAGTGGACTCATCTCTGCTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000077954.13 ENSMUST00000121148.8 |
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| CDS CAA 72 bp | AGAAGCAGAGATGAGTCCACTCTGGAGCGTATTTCTTaGGCATACAGCGGAAATAAAAATTCCGACTCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: RSRDESTLERIS*AYSGNKNSDSP Trigger: AGGAGAGTCGGAATTTTTATTTCCGCTGTATGCCAAAGAAATACGCTCCAGAGTGGACTCATCTCTGCTTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000077954.13 ENSMUST00000121148.8 |
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| CDS CCA 72 bp | TCCATCTGCTGTAACATGCAAGTGACCCATTCCTATTaGAGAAAACCACATCACTTTCAGAATCCAGATAGT | + |
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Preference number: 6 (lower is better) Translates to: SICCNMQVTHSY*RKPHHFQNPDS Trigger: ACTATCTGGATTCTGAAAGTGATGTGGTTTTCTCCAATAGGAATGGGTCACTTGCATGTTACAGCAGATGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077954.13 ENSMUST00000121148.8 |
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