Pregenerated sensors for SGCD (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020354Ensembl transcript IDs: ENSMUST00000077221.6, ENSMUST00000109220.8
Found 91 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGTCACCTTGATGGAGGAAGTGTGTCACAGTCAGGGGGTGGGCTTTaGGAGCTTCCTTCTAGCTGCCTGAGAATGCCAGGATTCTCCTGT | + |
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Preference number: 1 (lower is better) Translates to: CHLDGGSVSQSGGGL*ELPSSCLRMPGFSC Trigger: ACAGGAGAATCCTGGCATTCTCAGGCAGCTAGAAGGAAGCTCTCAAAGCCCACCCCCTGACTGTGACACACTTCCTCCATCAAGGTGACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109220.8 |
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| 3UTR GCA 90 bp | TTGACTTTGGAACAAGATGTAGAACTTTCAGCTCCTTCAGCATCATaGCTGCCTGCATGCTGCCGTGCTTCCCACCATAATGATAATGGG | + |
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Preference number: 1 (lower is better) Translates to: LTLEQDVELSAPSAS*LPACCRASHHNDNG Trigger: CCCATTATCATTATGGTGGGAAGCACGGCAGCATGCAGGCAGGCATGATGCTGAAGGAGCTGAAAGTTCTACATCTTGTTCCAAAGTCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109220.8 |
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| 3UTR TCA 90 bp | GTGCTTATATTCTGTCATGTGGATGATGGGAATGGGGCAGAAAGATaGCAGTGGATGATGTCACAGGGTCACCCATGGTTCCTTTTGTAC | + |
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Preference number: 1 (lower is better) Translates to: VLIFCHVDDGNGAER*QWMMSQGHPWFLLY Trigger: GTACAAAAGGAACCATGGGTGACCCTGTGACATCATCCACTGTCATCTTTCTGCCCCATTCCCATCATCCACATGACAGAATATAAGCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077221.6 |
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| 3UTR CCA 90 bp | AAGATTCCCGCCATCACTGCCTCTAATGACTCTACAAGAGAAGCTTaGTGGTTTACTGAACACATAGATGGATATTTTGTGGGTTCTCAA | + |
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Preference number: 1 (lower is better) Translates to: KIPAITASNDSTREA*WFTEHIDGYFVGSQ Trigger: TTGAGAACCCACAAAATATCCATCTATGTGTTCAGTAAACCACCAAGCTTCTCTTGTAGAGTCATTAGAGGCAGTGATGGCGGGAATCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077221.6 |
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| 3UTR TCA 90 bp | ACTGAACACATAGATGGATATTTTGTGGGTTCTCAATCCACTGTATaGTTTAAAATTGCCTGGGAAATGCTGGGCCTGAATGAGTGCTTA | + |
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Preference number: 1 (lower is better) Translates to: TEHIDGYFVGSQSTV*FKIAWEMLGLNECL Trigger: TAAGCACTCATTCAGGCCCAGCATTTCCCAGGCAATTTTAAATCATACAGTGGATTGAGAACCCACAAAATATCCATCTATGTGTTCAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077221.6 |
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| 3UTR GCA 90 bp | TTTCTAATACCCAATTTCTCTGTAGGGCTTGTCTCCATTTTCTTGTaGTTGGGAACACTTAATAGCACTCCAGTACTGCATTTAGAGTCA | + |
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Preference number: 1 (lower is better) Translates to: FLIPNFSVGLVSIFL*LGTLNSTPVLHLES Trigger: TGACTCTAAATGCAGTACTGGAGTGCTATTAAGTGTTCCCAAGCACAAGAAAATGGAGACAAGCCCTACAGAGAAATTGGGTATTAGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109220.8 |
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| 3UTR GCA 90 bp | CTCTTGATAACTCCCCCAAGCCATGCTGTGAATATGATCATGTCCTaGTTAAAACCATGTGAACAGATAATTTGTAAGCAATTTAATTTG | + |
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Preference number: 1 (lower is better) Translates to: LLITPPSHAVNMIMS*LKPCEQIICKQFNL Trigger: CAAATTAAATTGCTTACAAATTATCTGTTCACATGGTTTTAAGCAGGACATGATCATATTCACAGCATGGCTTGGGGGAGTTATCAAGAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109220.8 |
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| 3UTR CAA 90 bp | AGTGTCACCATTAGGAAGTATGGCCTTCTTGGAGTAGGTGTCACCTaGATGGAGGAAGTGTGTCACAGTCAGGGGGTGGGCTTTGAGAGC | + |
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Preference number: 2 (lower is better) Translates to: SVTIRKYGLLGVGVT*MEEVCHSQGVGFES Trigger: GCTCTCAAAGCCCACCCCCTGACTGTGACACACTTCCTCCATCAAGGTGACACCTACTCCAAGAAGGCCATACTTCCTAATGGTGACACT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109220.8 |
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| 3UTR-3UTR GCA 90 bp | TATGTTCAGGTGTTTCTACCAGAGAGCAACAAGTTGATTTACAGGCCACACATTTCATGCCTGCCTGCATaGTGCCGTGCTTCCCACCAT | + |
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Preference number: 2 (lower is better) Translates to: YVQVFLPESNKLIYRPHISCLPA*CRASHH Trigger: ATGGTGGGAAGCACGGCAGCATGCAGGCAGGCATGA...AATGTGTGGCCTGTAAATCAACTTGTTGCTCTCTGGTAGAAACACCTGAACATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109220.8 |
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| 3UTR CAA 90 bp | CTTCCTTCTAGCTGCCTGAGAATGCCAGGATTCTCCTGTTTGACTTaGGAACAAGATGTAGAACTTTCAGCTCCTTCAGCATCATGCCTG | + |
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Preference number: 2 (lower is better) Translates to: LPSSCLRMPGFSCLT*EQDVELSAPSASCL Trigger: CAGGCATGATGCTGAAGGAGCTGAAAGTTCTACATCTTGTTCCAAAGTCAAACAGGAGAATCCTGGCATTCTCAGGCAGCTAGAAGGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109220.8 |
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| 3UTR-3UTR TCA 90 bp | CTTGATAACTCCCCCAAGCCATGCTGTGAATATGATCATGTCCTGCTTAAAACCTGCAAAATGAGGCACTaGAGAGGATACTCAGAGGAC | + |
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Preference number: 2 (lower is better) Translates to: LDNSPKPCCEYDHVLLKTCKMRH*RGYSED Trigger: GTCCTCTGAGTATCCTCTTCAGTGCCTCATTTTGCA...GGTTTTAAGCAGGACATGATCATATTCACAGCATGGCTTGGGGGAGTTATCAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000109220.8 |
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| 3UTR-3UTR GCA 90 bp | AGGGCTTTGATAGGCTTTCTGTGTTCTAGTAAAAATAGCTGGCAGCCAGTGTTTCAAAAAGGGCCTTTATaGTGCCGGCAATTGTCCACT | + |
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Preference number: 2 (lower is better) Translates to: RALIGFLCSSKNSWQPVFQKGPL*CRQLST Trigger: AGTGGACAATTGCCGGCAGCATAAAGGCCCTTTTTG...AAACACTGGCTGCCAGCTATTTTTACTAGAACACAGAAAGCCTATCAAAGCCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000077221.6 |
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| 3UTR CAA 90 bp | CAACCCACTCATACACACTCACATACACATACACACAAAAGGGCTTaGATAGGCTTTCTGTGTTCTAGTAAAAATAGCTGGCAGCCAGTG | + |
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Preference number: 2 (lower is better) Translates to: QPTHTHSHTHTHKRA*IGFLCSSKNSWQPV Trigger: CACTGGCTGCCAGCTATTTTTACTAGAACACAGAAAGCCTATCAAAGCCCTTTTGTGTGTATGTGTATGTGAGTGTGTATGAGTGGGTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000077221.6 |
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| 3UTR CAA 90 bp | CTAATACCCAATTTCTCTGTAGGGCTTGTCTCCATTTTCTTGTGCTaGGGAACACTTAATAGCACTCCAGTACTGCATTTAGAGTCAGTT | + |
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Preference number: 2 (lower is better) Translates to: LIPNFSVGLVSIFLC*GTLNSTPVLHLESV Trigger: AACTGACTCTAAATGCAGTACTGGAGTGCTATTAAGTGTTCCCAAGCACAAGAAAATGGAGACAAGCCCTACAGAGAAATTGGGTATTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109220.8 |
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| 3UTR CAA 90 bp | GCTTTTCTAATACCCAATTTCTCTGTAGGGCTTGTCTCCATTTTCTaGTGCTTGGGAACACTTAATAGCACTCCAGTACTGCATTTAGAG | + |
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Preference number: 2 (lower is better) Translates to: AFLIPNFSVGLVSIF*CLGTLNSTPVLHLE Trigger: CTCTAAATGCAGTACTGGAGTGCTATTAAGTGTTCCCAAGCACAAGAAAATGGAGACAAGCCCTACAGAGAAATTGGGTATTAGAAAAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000109220.8 |
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| 3UTR-3UTR GCA 90 bp | AGTTTATTCCTTCTCTTGATAACTCCCCCAAGCCATGCTGTGAATATGATCATGGTCTCCATTTTCTTGTaGTTGGGAACACTTAATAGC | + |
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Preference number: 2 (lower is better) Translates to: SLFLLLITPPSHAVNMIMVSIFL*LGTLNS Trigger: GCTATTAAGTGTTCCCAAGCACAAGAAAATGGAGAC...CATGATCATATTCACAGCATGGCTTGGGGGAGTTATCAAGAGAAGGAATAAACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109220.8 |
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| 3UTR-3UTR CCA 90 bp | AGTTTATTCCTTCTCTTGATAACTCCCCCAAGCCATGCTGTGAATATGATCATGCCATTTTCTTGTGCTTaGGAACACTTAATAGCACTC | + |
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Preference number: 2 (lower is better) Translates to: SLFLLLITPPSHAVNMIMPFSCA*EHLIAL Trigger: GAGTGCTATTAAGTGTTCCCAAGCACAAGAAAATGG...CATGATCATATTCACAGCATGGCTTGGGGGAGTTATCAAGAGAAGGAATAAACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109220.8 |
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| 3UTR CAA 90 bp | ATGGCAGAATATTTACATTTGATCTCTTCTAATGGTGCCAGTTTTTaGCCACCCTCTATATGTTCAGGTGTTTCTACCAGAGAGCAACAA | + |
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Preference number: 2 (lower is better) Translates to: MAEYLHLISSNGASF*PPSICSGVSTREQQ Trigger: TTGTTGCTCTCTGGTAGAAACACCTGAACATATAGAGGGTGGCAAAAAACTGGCACCATTAGAAGAGATCAAATGTAAATATTCTGCCAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109220.8 |
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| 3UTR TCA 72 bp | GATGGAGGAAGTGTGTCACAGTCAGGGGGTGGGCTTTaGGAGCTTCCTTCTAGCTGCCTGAGAATGCCAGGA | + |
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Preference number: 3 (lower is better) Translates to: DGGSVSQSGGGL*ELPSSCLRMPG Trigger: TCCTGGCATTCTCAGGCAGCTAGAAGGAAGCTCTCAAAGCCCACCCCCTGACTGTGACACACTTCCTCCATC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109220.8 |
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| 3UTR GCA 72 bp | CTTTCAGCTCCTTCAGCATCATGCCTGCCTGCATGCTaGCGTGCTTCCCACCATAATGATAATGGGGTGAAC | + |
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Preference number: 3 (lower is better) Translates to: LSAPSASCLPAC*RASHHNDNGVN Trigger: GTTCACCCCATTATCATTATGGTGGGAAGCACGGCAGCATGCAGGCAGGCATGATGCTGAAGGAGCTGAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109220.8 |
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| 3UTR GCA 72 bp | GAACTTTCAGCTCCTTCAGCATCATGCCTGCCTGCATaGTGCCGTGCTTCCCACCATAATGATAATGGGGTG | + |
|
Preference number: 3 (lower is better) Translates to: ELSAPSASCLPA*CRASHHNDNGV Trigger: CACCCCATTATCATTATGGTGGGAAGCACGGCAGCATGCAGGCAGGCATGATGCTGAAGGAGCTGAAAGTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109220.8 |
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| 3UTR TCA 72 bp | TTCTGTCATGTGGATGATGGGAATGGGGCAGAAAGATaGCAGTGGATGATGTCACAGGGTCACCCATGGTTC | + |
|
Preference number: 3 (lower is better) Translates to: FCHVDDGNGAER*QWMMSQGHPWF Trigger: GAACCATGGGTGACCCTGTGACATCATCCACTGTCATCTTTCTGCCCCATTCCCATCATCCACATGACAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077221.6 |
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| 3UTR GCA 72 bp | GAACAAGATGTAGAACTTTCAGCTCCTTCAGCATCATaGCTGCCTGCATGCTGCCGTGCTTCCCACCATAAT | + |
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Preference number: 3 (lower is better) Translates to: EQDVELSAPSAS*LPACCRASHHN Trigger: ATTATGGTGGGAAGCACGGCAGCATGCAGGCAGGCATGATGCTGAAGGAGCTGAAAGTTCTACATCTTGTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109220.8 |
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| 3UTR TCA 72 bp | TGGATGATGGGAATGGGGCAGAAAGATGACAGTGGATaGTGTCACAGGGTCACCCATGGTTCCTTTTGTACT | + |
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Preference number: 3 (lower is better) Translates to: WMMGMGQKDDSG*CHRVTHGSFCT Trigger: AGTACAAAAGGAACCATGGGTGACCCTGTGACATCATCCACTGTCATCTTTCTGCCCCATTCCCATCATCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077221.6 |
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| 3UTR CCA 72 bp | ATGCTGGGCCTGAATGAGTGCTTATATTCTGTCATGTaGATGATGGGAATGGGGCAGAAAGATGACAGTGGA | + |
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Preference number: 3 (lower is better) Translates to: MLGLNECLYSVM*MMGMGQKDDSG Trigger: TCCACTGTCATCTTTCTGCCCCATTCCCATCATCCACATGACAGAATATAAGCACTCATTCAGGCCCAGCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077221.6 |
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| 3UTR-3UTR CAA 90 bp | CCCGCCATCACTGCCTCTAATGACTCTACAAGAGAAGCTTGGTGGTTTACTGAAACACACAAAAGGGCTTaGATAGGCTTTCTGTGTTCT | + |
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Preference number: 3 (lower is better) Translates to: PAITASNDSTREAWWFTETHKRA*IGFLCS Trigger: AGAACACAGAAAGCCTATCAAAGCCCTTTTGTGTGT...TTCAGTAAACCACCAAGCTTCTCTTGTAGAGTCATTAGAGGCAGTGATGGCGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077221.6 |
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| 3UTR-3UTR CAA 90 bp | GCATCATTGATCTGTGGCCAATGCAGTGAGCTGGTGGCTAACAGTATTCTAACTAATGGTGCCAGTTTTTaGCCACCCTCTATATGTTCA | + |
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Preference number: 3 (lower is better) Translates to: ASLICGQCSELVANSILTNGASF*PPSICS Trigger: TGAACATATAGAGGGTGGCAAAAAACTGGCACCATT...AGTTAGAATACTGTTAGCCACCAGCTCACTGCATTGGCCACAGATCAATGATGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109220.8 |
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| 3UTR GCA 72 bp | TTTAAAATTGCCTGGGAAATGCTGGGCCTGAATGAGTaGTTATATTCTGTCATGTGGATGATGGGAATGGGG | + |
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Preference number: 3 (lower is better) Translates to: FKIAWEMLGLNE*LYSVMWMMGMG Trigger: CCCCATTCCCATCATCCACATGACAGAATATAAGCACTCATTCAGGCCCAGCATTTCCCAGGCAATTTTAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077221.6 |
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| 3UTR-3UTR CAA 90 bp | GCATCATTGATCTGTGGCCAATGCAGTGAGCTGGTGGCTAACAGTATTCTAACTTCCATTTTCTTGTGCTaGGGAACACTTAATAGCACT | + |
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Preference number: 3 (lower is better) Translates to: ASLICGQCSELVANSILTSIFLC*GTLNST Trigger: AGTGCTATTAAGTGTTCCCAAGCACAAGAAAATGGA...AGTTAGAATACTGTTAGCCACCAGCTCACTGCATTGGCCACAGATCAATGATGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109220.8 |
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| 3UTR-3UTR CAA 90 bp | GCATCATTGATCTGTGGCCAATGCAGTGAGCTGGTGGCTAACAGTATTCTAACTCTTGTCTCCATTTTCTaGTGCTTGGGAACACTTAAT | + |
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Preference number: 3 (lower is better) Translates to: ASLICGQCSELVANSILTLVSIF*CLGTLN Trigger: ATTAAGTGTTCCCAAGCACAAGAAAATGGAGACAAG...AGTTAGAATACTGTTAGCCACCAGCTCACTGCATTGGCCACAGATCAATGATGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109220.8 |
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| 3UTR-3UTR CAA 90 bp | ACACACTCACATACACATACACACAAAAGGGCTTTGATAGGCTTTCTGTGTTCTTTATGCTGCCGGCAATaGTCCACTATGGATAGTCTT | + |
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Preference number: 3 (lower is better) Translates to: THSHTHTHKRALIGFLCSLCCRQ*STMDSL Trigger: AAGACTATCCATAGTGGACAATTGCCGGCAGCATAA...AGAACACAGAAAGCCTATCAAAGCCCTTTTGTGTGTATGTGTATGTGAGTGTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077221.6 |
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| 3UTR CCA 72 bp | GTATATGTGTACATATTGTGGTGGTTTGAATATACTTaGCCCATGGAAGTGTCACCATTAGGAAGTATGGCC | + |
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Preference number: 3 (lower is better) Translates to: VYVYILWWFEYT*PMEVSPLGSMA Trigger: GGCCATACTTCCTAATGGTGACACTTCCATGGGCCAAGTATATTCAAACCACCACAATATGTACACATATAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109220.8 |
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| 3UTR GCA 72 bp | ACTCCCCCAAGCCATGCTGTGAATATGATCATGTCCTaGTTAAAACCATGTGAACAGATAATTTGTAAGCAA | + |
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Preference number: 3 (lower is better) Translates to: TPPSHAVNMIMS*LKPCEQIICKQ Trigger: TTGCTTACAAATTATCTGTTCACATGGTTTTAAGCAGGACATGATCATATTCACAGCATGGCTTGGGGGAGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109220.8 |
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| 3UTR CCA 72 bp | ATCACTGCCTCTAATGACTCTACAAGAGAAGCTTGGTaGTTTACTGAACACATAGATGGATATTTTGTGGGT | + |
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Preference number: 3 (lower is better) Translates to: ITASNDSTREAW*FTEHIDGYFVG Trigger: ACCCACAAAATATCCATCTATGTGTTCAGTAAACCACCAAGCTTCTCTTGTAGAGTCATTAGAGGCAGTGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077221.6 |
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| 3UTR TCA 72 bp | ATAGATGGATATTTTGTGGGTTCTCAATCCACTGTATaGTTTAAAATTGCCTGGGAAATGCTGGGCCTGAAT | + |
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Preference number: 3 (lower is better) Translates to: IDGYFVGSQSTV*FKIAWEMLGLN Trigger: ATTCAGGCCCAGCATTTCCCAGGCAATTTTAAATCATACAGTGGATTGAGAACCCACAAAATATCCATCTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077221.6 |
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| 3UTR TCA 72 bp | TATATGTTCAGGTGTTTCTACCAGAGAGCAACAAGTTaGTTTACAGGCCACACATTATATGTATATGTGTAC | + |
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Preference number: 3 (lower is better) Translates to: YMFRCFYQRATS*FTGHTLYVYVY Trigger: GTACACATATACATATAATGTGTGGCCTGTAAATCAACTTGTTGCTCTCTGGTAGAAACACCTGAACATATA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109220.8 |
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| CDS-3UTR GCA 90 bp | AACTTTCAGCTCCTTCAGCATCATGCCTGCCTGCATGCTGCCGTGCTTCCCACCCAGAGCTGGGCATGGTaGTCCTGTGGTGGGAATACT | + |
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Preference number: 4 (lower is better) Translates to: NFQLLQHHACLHAAVLPTQSWAW*SCGGNT Trigger: AGTATTCCCACCACAGGAGCACCATGCCCAGCTCTG...GGTGGGAAGCACGGCAGCATGCAGGCAGGCATGATGCTGAAGGAGCTGAAAGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109220.8 |
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| CDS-3UTR CCA 90 bp | GCTCCTTCAGCATCATGCCTGCCTGCATGCTGCCGTGCTTCCCACCATAATGATCCTCAGAGCTGGGCATaGTGCTCCTGTGGTGGGAAT | + |
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Preference number: 4 (lower is better) Translates to: APSASCLPACCRASHHNDPQSWA*CSCGGN Trigger: ATTCCCACCACAGGAGCACCATGCCCAGCTCTGAGG...ATCATTATGGTGGGAAGCACGGCAGCATGCAGGCAGGCATGATGCTGAAGGAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109220.8 |
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| CDS-3UTR CCA 90 bp | GCACTTGAGAGTGACCTGAAGATTCCCGCCATCACTGCCTCTAATGACTCTACAGTGGCCCCTCAGAGCTaGGCATGGTGCTCCTGTGGT | + |
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Preference number: 4 (lower is better) Translates to: ALESDLKIPAITASNDSTVAPQS*AWCSCG Trigger: ACCACAGGAGCACCATGCCCAGCTCTGAGGGGCCAC...TGTAGAGTCATTAGAGGCAGTGATGGCGGGAATCTTCAGGTCACTCTCAAGTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077221.6 |
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| CDS-3UTR TCA 90 bp | GCTCCTTCAGCATCATGCCTGCCTGCATGCTGCCGTGCTTCCCACCATAATGATTACCTGGTCGGGACTTaGTTTCTTTGGCGTAGAGAG | + |
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Preference number: 4 (lower is better) Translates to: APSASCLPACCRASHHNDYLVGT*FLWRRE Trigger: CTCTCTACGCCAAAGAAATCAAGTCCCGACCAGGTA...ATCATTATGGTGGGAAGCACGGCAGCATGCAGGCAGGCATGATGCTGAAGGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109220.8 |
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| CDS-3UTR CCA 90 bp | GCATCATTGATCTGTGGCCAATGCAGTGAGCTGGTGGCTAACAGTATTCTAACTGTGGCCCCTCAGAGCTaGGCATGGTGCTCCTGTGGT | + |
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Preference number: 4 (lower is better) Translates to: ASLICGQCSELVANSILTVAPQS*AWCSCG Trigger: ACCACAGGAGCACCATGCCCAGCTCTGAGGGGCCAC...AGTTAGAATACTGTTAGCCACCAGCTCACTGCATTGGCCACAGATCAATGATGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109220.8 |
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| 3UTR CAA 72 bp | ATTAGGAAGTATGGCCTTCTTGGAGTAGGTGTCACCTaGATGGAGGAAGTGTGTCACAGTCAGGGGGTGGGC | + |
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Preference number: 4 (lower is better) Translates to: IRKYGLLGVGVT*MEEVCHSQGVG Trigger: GCCCACCCCCTGACTGTGACACACTTCCTCCATCAAGGTGACACCTACTCCAAGAAGGCCATACTTCCTAAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109220.8 |
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| CDS-3UTR GCA 90 bp | GACCTGAAGATTCCCGCCATCACTGCCTCTAATGACTCTACAAGAGAAGCTTGGACCTCGAAGACCTTCTaGCTCGTTCCTGTGGGTGTG | + |
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Preference number: 4 (lower is better) Translates to: DLKIPAITASNDSTREAWTSKTF*LVPVGV Trigger: CACACCCACAGGAACGAGGCAGAAGGTCTTCGAGGT...CCAAGCTTCTCTTGTAGAGTCATTAGAGGCAGTGATGGCGGGAATCTTCAGGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077221.6 |
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| CDS-3UTR CCA 90 bp | CCCGCCATCACTGCCTCTAATGACTCTACAAGAGAAGCTTGGTGGTTTACTGAATCTGCCTCGTTCCTGTaGGTGTGTAGGATCCACGAG | + |
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Preference number: 4 (lower is better) Translates to: PAITASNDSTREAWWFTESASFL*VCRIHE Trigger: CTCGTGGATCCTACACACCCACAGGAACGAGGCAGA...TTCAGTAAACCACCAAGCTTCTCTTGTAGAGTCATTAGAGGCAGTGATGGCGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077221.6 |
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| CDS-3UTR TCA 90 bp | GCACTTGAGAGTGACCTGAAGATTCCCGCCATCACTGCCTCTAATGACTCTACACGTTCCTGGCAGATTTaGAGTATAGGGCATTACCTG | + |
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Preference number: 4 (lower is better) Translates to: ALESDLKIPAITASNDSTRSWQI*SIGHYL Trigger: CAGGTAATGCCCTATACTTCAAATCTGCCAGGAACG...TGTAGAGTCATTAGAGGCAGTGATGGCGGGAATCTTCAGGTCACTCTCAAGTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077221.6 |
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| CDS-3UTR CCA 90 bp | ATATCAGCACTTGAGAGTGACCTGAAGATTCCCGCCATCACTGCCTCTAATGACCACTTTGTATATGTGTaGCCCCTCAGAGCTGGGCAT | + |
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Preference number: 4 (lower is better) Translates to: ISALESDLKIPAITASNDHFVYV*PLRAGH Trigger: ATGCCCAGCTCTGAGGGGCCACACATATACAAAGTG...GTCATTAGAGGCAGTGATGGCGGGAATCTTCAGGTCACTCTCAAGTGCTGATAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077221.6 |
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| CDS-3UTR GCA 90 bp | AGGGCTTTGATAGGCTTTCTGTGTTCTAGTAAAAATAGCTGGCAGCCAGTGTTTCAGAGCTGGGCATGGTaGTCCTGTGGTGGGAATACT | + |
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Preference number: 4 (lower is better) Translates to: RALIGFLCSSKNSWQPVFQSWAW*SCGGNT Trigger: AGTATTCCCACCACAGGAGCACCATGCCCAGCTCTG...AAACACTGGCTGCCAGCTATTTTTACTAGAACACAGAAAGCCTATCAAAGCCCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077221.6 |
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| CDS-3UTR GCA 90 bp | GACCTGAAGATTCCCGCCATCACTGCCTCTAATGACTCTACAAGAGAAGCTTGGTTCCTTGAAGGGGTCTaGTCTGACATTAGGTGTTTC | + |
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Preference number: 4 (lower is better) Translates to: DLKIPAITASNDSTREAWFLEGV*SDIRCF Trigger: GAAACACCTAATGTCAGAGCAGACCCCTTCAAGGAA...CCAAGCTTCTCTTGTAGAGTCATTAGAGGCAGTGATGGCGGGAATCTTCAGGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077221.6 |
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| CDS-3UTR CCA 90 bp | GCACTTGAGAGTGACCTGAAGATTCCCGCCATCACTGCCTCTAATGACTCTACAGTGTTTCTATGGATTTaGGGAAGACTGTGCCTTCAG | + |
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Preference number: 4 (lower is better) Translates to: ALESDLKIPAITASNDSTVFLWI*GRLCLQ Trigger: CTGAAGGCACAGTCTTCCCCAAATCCATAGAAACAC...TGTAGAGTCATTAGAGGCAGTGATGGCGGGAATCTTCAGGTCACTCTCAAGTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077221.6 |
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| CDS-3UTR CCA 90 bp | TTGTGGGTTCTCAATCCACTGTATGATTTAAAATTGCCTGGGAAATGCTGGGCCGAACCAGTTCCTGCCTaGGACAGGAATAACCTCCCA | + |
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Preference number: 4 (lower is better) Translates to: LWVLNPLYDLKLPGKCWAEPVPA*DRNNLP Trigger: TGGGAGGTTATTCCTGTCCCAGGCAGGAACTGGTTC...GGCCCAGCATTTCCCAGGCAATTTTAAATCATACAGTGGATTGAGAACCCACAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077221.6 |
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| CDS-3UTR TCA 90 bp | GACCTGAAGATTCCCGCCATCACTGCCTCTAATGACTCTACAAGAGAAGCTTGGACACTTGTGTTTATCTaGCAGGTAGAACCAGTTCCT | + |
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Preference number: 4 (lower is better) Translates to: DLKIPAITASNDSTREAWTLVFI*QVEPVP Trigger: AGGAACTGGTTCTACCTGTCAGATAAACACAAGTGT...CCAAGCTTCTCTTGTAGAGTCATTAGAGGCAGTGATGGCGGGAATCTTCAGGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077221.6 |
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| CDS-3UTR GCA 90 bp | ATGACAGTGGATGATGTCACAGGGTCACCCATGGTTCCTTTTGTACTGAAACCTGTCTCAGCTCACTTCTaGAGATGGCTTCCATATTGC | + |
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Preference number: 4 (lower is better) Translates to: MTVDDVTGSPMVPFVLKPVSAHF*RWLPYC Trigger: GCAATATGGAAGCCATCTGCAGAAGTGAGCTGAGAC...AGGTTTCAGTACAAAAGGAACCATGGGTGACCCTGTGACATCATCCACTGTCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077221.6 |
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| 3UTR CAA 72 bp | AGCTGCCTGAGAATGCCAGGATTCTCCTGTTTGACTTaGGAACAAGATGTAGAACTTTCAGCTCCTTCAGCA | + |
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Preference number: 4 (lower is better) Translates to: SCLRMPGFSCLT*EQDVELSAPSA Trigger: TGCTGAAGGAGCTGAAAGTTCTACATCTTGTTCCAAAGTCAAACAGGAGAATCCTGGCATTCTCAGGCAGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109220.8 |
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| CDS-3UTR TCA 90 bp | GATGATGTCACAGGGTCACCCATGGTTCCTTTTGTACTGAAACCTCATTTTATATACCTGGTCGGGACTTaGTTTCTTTGGCGTAGAGAG | + |
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Preference number: 4 (lower is better) Translates to: DDVTGSPMVPFVLKPHFIYLVGT*FLWRRE Trigger: CTCTCTACGCCAAAGAAATCAAGTCCCGACCAGGTA...TATAAAATGAGGTTTCAGTACAAAAGGAACCATGGGTGACCCTGTGACATCATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077221.6 |
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| CDS-3UTR CCA 90 bp | GTCACCCATGGTTCCTTTTGTACTGAAACCTCATTTTATACAGAGGATATATATCCTCAGAGCTGGGCATaGTGCTCCTGTGGTGGGAAT | + |
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Preference number: 4 (lower is better) Translates to: VTHGSFCTETSFYTEDIYPQSWA*CSCGGN Trigger: ATTCCCACCACAGGAGCACCATGCCCAGCTCTGAGG...ATATATATCCTCTGTATAAAATGAGGTTTCAGTACAAAAGGAACCATGGGTGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077221.6 |
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| CDS-3UTR CCA 90 bp | GCATCATTGATCTGTGGCCAATGCAGTGAGCTGGTGGCTAACAGTATTCTAACTGAATCCAGATGGTCATaGCCAAGTTCACCAGTATTA | + |
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Preference number: 4 (lower is better) Translates to: ASLICGQCSELVANSILTESRWS*PSSPVL Trigger: TAATACTGGTGAACTTGGCCATGACCATCTGGATTC...AGTTAGAATACTGTTAGCCACCAGCTCACTGCATTGGCCACAGATCAATGATGC 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109220.8 |
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| CDS-3UTR CCA 90 bp | AATGAGTGCTTATATTCTGTCATGTGGATGATGGGAATGGGGCAGAAAGATGACGCTCACTTCTGCAGATaGCTTCCATATTGCCAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: NECLYSVMWMMGMGQKDDAHFCR*LPYCQL Trigger: AAGCTGGCAATATGGAAGCCATCTGCAGAAGTGAGC...GTCATCTTTCTGCCCCATTCCCATCATCCACATGACAGAATATAAGCACTCATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077221.6 |
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| CDS-3UTR TCA 90 bp | TATGTTCAGGTGTTTCTACCAGAGAGCAACAAGTTGATTTACAGGCCACACATTCGTTCCTGGCAGATTTaGAGTATAGGGCATTACCTG | + |
|
Preference number: 4 (lower is better) Translates to: YVQVFLPESNKLIYRPHIRSWQI*SIGHYL Trigger: CAGGTAATGCCCTATACTTCAAATCTGCCAGGAACG...AATGTGTGGCCTGTAAATCAACTTGTTGCTCTCTGGTAGAAACACCTGAACATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109220.8 |
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| CDS-3UTR CCA 90 bp | TGCTTATATTCTGTCATGTGGATGATGGGAATGGGGCAGAAAGATGACAGTGGAGAATCCAGATGGTCATaGCCAAGTTCACCAGTATTA | + |
|
Preference number: 4 (lower is better) Translates to: CLYSVMWMMGMGQKDDSGESRWS*PSSPVL Trigger: TAATACTGGTGAACTTGGCCATGACCATCTGGATTC...TCCACTGTCATCTTTCTGCCCCATTCCCATCATCCACATGACAGAATATAAGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077221.6 |
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| CDS-3UTR CCA 90 bp | GTCACCCATGGTTCCTTTTGTACTGAAACCTCATTTTATACAGAGGATATATATGGAATAACCTCCCATTaGCGCAGACGCAGACCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: VTHGSFCTETSFYTEDIYGITSH*RRRRPR Trigger: TCGAGGTCTGCGTCTGCGCCAATGGGAGGTTATTCC...ATATATATCCTCTGTATAAAATGAGGTTTCAGTACAAAAGGAACCATGGGTGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077221.6 |
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| 3UTR CAA 72 bp | GTGTGCTACTATTTAACAAAACCCTATATAGCATCATaGATCTGTGGCCAATGCAGTGAGCTGGTGGCTAAC | + |
|
Preference number: 4 (lower is better) Translates to: VCYYLTKPYIAS*ICGQCSELVAN Trigger: GTTAGCCACCAGCTCACTGCATTGGCCACAGATCAATGATGCTATATAGGGTTTTGTTAAATAGTAGCACAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109220.8 |
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| CDS-3UTR TCA 90 bp | AAGATGACAGTGGATGATGTCACAGGGTCACCCATGGTTCCTTTTGTACTGAAAGTCAGCACTTTTGTCTaGTCATTGAGAATGTTCACT | + |
|
Preference number: 4 (lower is better) Translates to: KMTVDDVTGSPMVPFVLKVSTFV*SLRMFT Trigger: AGTGAACATTCTCAATGATCAGACAAAAGTGCTGAC...TTTCAGTACAAAAGGAACCATGGGTGACCCTGTGACATCATCCACTGTCATCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077221.6 |
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| CDS-3UTR GCA 90 bp | AAGATGACAGTGGATGATGTCACAGGGTCACCCATGGTTCCTTTTGTACTGAAATTACTTCAAACCTTTTaGCATATGCTTCCACAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: KMTVDDVTGSPMVPFVLKLLQTF*HMLPQP Trigger: AGGCTGTGGAAGCATATGGCAAAAGGTTTGAAGTAA...TTTCAGTACAAAAGGAACCATGGGTGACCCTGTGACATCATCCACTGTCATCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077221.6 |
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| CDS-3UTR GCA 90 bp | CTTGATAACTCCCCCAAGCCATGCTGTGAATATGATCATGTCCTGCTTAAAACCTTACTTCAAACCTTTTaGCATATGCTTCCACAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LDNSPKPCCEYDHVLLKTLLQTF*HMLPQP Trigger: AGGCTGTGGAAGCATATGGCAAAAGGTTTGAAGTAA...GGTTTTAAGCAGGACATGATCATATTCACAGCATGGCTTGGGGGAGTTATCAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000109220.8 |
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| CDS-3UTR CCA 90 bp | TATGTTCAGGTGTTTCTACCAGAGAGCAACAAGTTGATTTACAGGCCACACATTGTGTTTCTATGGATTTaGGGAAGACTGTGCCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: YVQVFLPESNKLIYRPHIVFLWI*GRLCLQ Trigger: CTGAAGGCACAGTCTTCCCCAAATCCATAGAAACAC...AATGTGTGGCCTGTAAATCAACTTGTTGCTCTCTGGTAGAAACACCTGAACATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000109220.8 |
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| 3UTR CAA 72 bp | AATTTCTCTGTAGGGCTTGTCTCCATTTTCTTGTGCTaGGGAACACTTAATAGCACTCCAGTACTGCATTTA | + |
|
Preference number: 4 (lower is better) Translates to: NFSVGLVSIFLC*GTLNSTPVLHL Trigger: TAAATGCAGTACTGGAGTGCTATTAAGTGTTCCCAAGCACAAGAAAATGGAGACAAGCCCTACAGAGAAATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109220.8 |
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| 3UTR CAA 72 bp | CATACACACTCACATACACATACACACAAAAGGGCTTaGATAGGCTTTCTGTGTTCTAGTAAAAATAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: HTHSHTHTHKRA*IGFLCSSKNSW Trigger: CCAGCTATTTTTACTAGAACACAGAAAGCCTATCAAAGCCCTTTTGTGTGTATGTGTATGTGAGTGTGTATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000077221.6 |
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| CDS-3UTR GCA 90 bp | ACACACTCACATACACATACACACAAAAGGGCTTTGATAGGCTTTCTGTGTTCTCATATTGCCAGCTTCTaGATTTATTTCTACTCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: THSHTHTHKRALIGFLCSHIASF*IYFYSF Trigger: AAAGGAGTAGAAATAAATGCAGAAGCTGGCAATATG...AGAACACAGAAAGCCTATCAAAGCCCTTTTGTGTGTATGTGTATGTGAGTGTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077221.6 |
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| 3UTR CAA 72 bp | TATTTACATTTGATCTCTTCTAATGGTGCCAGTTTTTaGCCACCCTCTATATGTTCAGGTGTTTCTACCAGA | + |
|
Preference number: 4 (lower is better) Translates to: YLHLISSNGASF*PPSICSGVSTR Trigger: TCTGGTAGAAACACCTGAACATATAGAGGGTGGCAAAAAACTGGCACCATTAGAAGAGATCAAATGTAAATA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000109220.8 |
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| CDS-3UTR CAA 90 bp | AACTTTCAGCTCCTTCAGCATCATGCCTGCCTGCATGCTGCCGTGCTTCCCACCCAGACCCTTAGTTCCTaGAAGGGGTCTGCTCTGACA | + |
|
Preference number: 5 (lower is better) Translates to: NFQLLQHHACLHAAVLPTQTLSS*KGSALT Trigger: TGTCAGAGCAGACCCCTTCAAGGAACTAAGGGTCTG...GGTGGGAAGCACGGCAGCATGCAGGCAGGCATGATGCTGAAGGAGCTGAAAGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109220.8 |
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| CDS-3UTR CAA 90 bp | TGCTTATATTCTGTCATGTGGATGATGGGAATGGGGCAGAAAGATGACAGTGGAAGGAATAACCTCCCATaGGCGCAGACGCAGACCTCG | + |
|
Preference number: 5 (lower is better) Translates to: CLYSVMWMMGMGQKDDSGRNNLP*AQTQTS Trigger: CGAGGTCTGCGTCTGCGCCAATGGGAGGTTATTCCT...TCCACTGTCATCTTTCTGCCCCATTCCCATCATCCACATGACAGAATATAAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077221.6 |
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| CDS-3UTR CAA 90 bp | AAGATGACAGTGGATGATGTCACAGGGTCACCCATGGTTCCTTTTGTACTGAAAGGTGTTTCTATGGATTaGGGGAAGACTGTGCCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: KMTVDDVTGSPMVPFVLKGVSMD*GKTVPS Trigger: TGAAGGCACAGTCTTCCCCAAATCCATAGAAACACC...TTTCAGTACAAAAGGAACCATGGGTGACCCTGTGACATCATCCACTGTCATCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077221.6 |
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| CDS-3UTR CAA 90 bp | ATATACTTGGCCCATGGAAGTGTCACCATTAGGAAGTATGGCCTTCTTGGAGTAGGTGTTTCTATGGATTaGGGGAAGACTGTGCCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: IYLAHGSVTIRKYGLLGVGVSMD*GKTVPS Trigger: TGAAGGCACAGTCTTCCCCAAATCCATAGAAACACC...TACTCCAAGAAGGCCATACTTCCTAATGGTGACACTTCCATGGGCCAAGTATAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109220.8 |
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| CDS-3UTR CAA 90 bp | CTTGATAACTCCCCCAAGCCATGCTGTGAATATGATCATGTCCTGCTTAAAACCACGTTCCTGGCAGATTaGAAGTATAGGGCATTACCT | + |
|
Preference number: 5 (lower is better) Translates to: LDNSPKPCCEYDHVLLKTTFLAD*KYRALP Trigger: AGGTAATGCCCTATACTTCAAATCTGCCAGGAACGT...GGTTTTAAGCAGGACATGATCATATTCACAGCATGGCTTGGGGGAGTTATCAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000109220.8 |
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| CDS-3UTR CAA 90 bp | GATGATGTCACAGGGTCACCCATGGTTCCTTTTGTACTGAAACCTCATTTTATATCCAACCTTAGTTCCTaGAAGGGGTCTGCTCTGACA | + |
|
Preference number: 5 (lower is better) Translates to: DDVTGSPMVPFVLKPHFISNLSS*KGSALT Trigger: TGTCAGAGCAGACCCCTTCAAGGAACTAAGGTTGGA...TATAAAATGAGGTTTCAGTACAAAAGGAACCATGGGTGACCCTGTGACATCATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000077221.6 |
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| CDS-3UTR CAA 90 bp | GCTTTGATAGGCTTTCTGTGTTCTAGTAAAAATAGCTGGCAGCCAGTGTTTCAATCACTAGAGATCGGGTaGGGGACTCCAACCTTAGTT | + |
|
Preference number: 5 (lower is better) Translates to: ALIGFLCSSKNSWQPVFQSLEIG*GTPTLV Trigger: AACTAAGGTTGGAGTCCCCAACCCGATCTCTAGTGA...TTGAAACACTGGCTGCCAGCTATTTTTACTAGAACACAGAAAGCCTATCAAAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000077221.6 |
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| CDS-3UTR CAA 90 bp | AATGAGTGCTTATATTCTGTCATGTGGATGATGGGAATGGGGCAGAAAGATGACACGTTCCTGGCAGATTaGAAGTATAGGGCATTACCT | + |
|
Preference number: 5 (lower is better) Translates to: NECLYSVMWMMGMGQKDDTFLAD*KYRALP Trigger: AGGTAATGCCCTATACTTCAAATCTGCCAGGAACGT...GTCATCTTTCTGCCCCATTCCCATCATCCACATGACAGAATATAAGCACTCATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077221.6 |
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| CDS-3UTR CAA 90 bp | ACACACTCACATACACATACACACAAAAGGGCTTTGATAGGCTTTCTGTGTTCTTTAATCTCTCCATCCTaGGACTCCAGTCTCAGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: THSHTHTHKRALIGFLCSLISPS*DSSLSS Trigger: TGAGCTGAGACTGGAGTCCAAGGATGGAGAGATTAA...AGAACACAGAAAGCCTATCAAAGCCCTTTTGTGTGTATGTGTATGTGAGTGTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077221.6 |
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| CDS-3UTR CAA 90 bp | TTTAAAATTGCCTGGGAAATGCTGGGCCTGAATGAGTGCTTATATTCTGTCATGGGCAGTCTAGGTAGTTaGATTTTCGCAGCATCTAAC | + |
|
Preference number: 5 (lower is better) Translates to: FKIAWEMLGLNECLYSVMGSLGS*IFAASN Trigger: GTTAGATGCTGCGAAAATCAAACTACCTAGACTGCC...CATGACAGAATATAAGCACTCATTCAGGCCCAGCATTTCCCAGGCAATTTTAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077221.6 |
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| CDS CCA 72 bp | AACCAGTTCCTGCCTGGGACAGGAATAACCTCCCATTaGCGCAGACGCAGACCTCGAAGACCTTCTGCCTCG | + |
|
Preference number: 6 (lower is better) Translates to: NQFLPGTGITSH*RRRRPRRPSAS Trigger: CGAGGCAGAAGGTCTTCGAGGTCTGCGTCTGCGCCAATGGGAGGTTATTCCTGTCCCAGGCAGGAACTGGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077221.6 |
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| CDS CCA 72 bp | CCACTTTGTATATGTGTGGCCCCTCAGAGCTGGGCATaGTGCTCCTGTGGTGGGAATACTGTTCCTGAGGCA | + |
|
Preference number: 6 (lower is better) Translates to: PLCICVAPQSWA*CSCGGNTVPEA Trigger: TGCCTCAGGAACAGTATTCCCACCACAGGAGCACCATGCCCAGCTCTGAGGGGCCACACATATACAAAGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077221.6 ENSMUST00000109220.8 |
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| CDS CCA 72 bp | TTTCCTCCAGCCGTAAATCCCCACTTTGTATATGTGTaGCCCCTCAGAGCTGGGCATGGTGCTCCTGTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: FPPAVNPHFVYV*PLRAGHGAPVV Trigger: CACCACAGGAGCACCATGCCCAGCTCTGAGGGGCCACACATATACAAAGTGGGGATTTACGGCTGGAGGAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000077221.6 ENSMUST00000109220.8 |
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| CDS CCA 72 bp | AAATCCCCACTTTGTATATGTGTGGCCCCTCAGAGCTaGGCATGGTGCTCCTGTGGTGGGAATACTGTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: KSPLCICVAPQS*AWCSCGGNTVP Trigger: AGGAACAGTATTCCCACCACAGGAGCACCATGCCCAGCTCTGAGGGGCCACACATATACAAAGTGGGGATTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000077221.6 ENSMUST00000109220.8 |
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| CDS GCA 72 bp | TCTCTCCATCCTTGGACTCCAGTCTCAGCTCACTTCTaGAGATGGCTTCCATATTGCCAGCTTCTGCATTTA | + |
|
Preference number: 6 (lower is better) Translates to: SLHPWTPVSAHF*RWLPYCQLLHL Trigger: TAAATGCAGAAGCTGGCAATATGGAAGCCATCTGCAGAAGTGAGCTGAGACTGGAGTCCAAGGATGGAGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077221.6 |
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| CDS CAA 72 bp | AAGGGGTCTGCTCTGACATTAGGTGTTTCTATGGATTaGGGGAAGACTGTGCCTTCAGCTCCTAAGACTCTC | + |
|
Preference number: 6 (lower is better) Translates to: KGSALTLGVSMD*GKTVPSAPKTL Trigger: GAGAGTCTTAGGAGCTGAAGGCACAGTCTTCCCCAAATCCATAGAAACACCTAATGTCAGAGCAGACCCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000077221.6 ENSMUST00000109220.8 |
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| CDS CAA 90 bp | AGTTCCTTGAAGGGGTCTGCTCTGACATTAGGTGTTTCTATGGATTaGGGGAAGACTGTGCCTTCAGCTCCTAAGACTCTCAATCTCTCA | + |
|
Preference number: 6 (lower is better) Translates to: SSLKGSALTLGVSMD*GKTVPSAPKTLNLS Trigger: TGAGAGATTGAGAGTCTTAGGAGCTGAAGGCACAGTCTTCCCCAAATCCATAGAAACACCTAATGTCAGAGCAGACCCCTTCAAGGAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000077221.6 ENSMUST00000109220.8 |
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| CDS CAA 90 bp | AGATGGCTTCCATATTGCCAGCTTCTGCATTTATTTCTACTCCTTTaGGGGCTTCCATCACTAGAGATCGGGTTGGGGACTCCAACCTTA | + |
|
Preference number: 6 (lower is better) Translates to: RWLPYCQLLHLFLLL*GLPSLEIGLGTPTL Trigger: TAAGGTTGGAGTCCCCAACCCGATCTCTAGTGATGGAAGCCCCAAAAGGAGTAGAAATAAATGCAGAAGCTGGCAATATGGAAGCCATCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077221.6 |
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| CDS CAA 72 bp | CCATATTGCCAGCTTCTGCATTTATTTCTACTCCTTTaGGGGCTTCCATCACTAGAGATCGGGTTGGGGACT | + |
|
Preference number: 6 (lower is better) Translates to: PYCQLLHLFLLL*GLPSLEIGLGT Trigger: AGTCCCCAACCCGATCTCTAGTGATGGAAGCCCCAAAAGGAGTAGAAATAAATGCAGAAGCTGGCAATATGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000077221.6 |
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| CDS GCA 72 bp | TCCAGAAACAGTTTTTACTTCAAACCTTTTGCCATATaGTTCCACAGCCTTCGGACCTGTCACCAGCTGAGT | + |
|
Preference number: 6 (lower is better) Translates to: SRNSFYFKPFAI*FHSLRTCHQLS Trigger: ACTCAGCTGGTGACAGGTCCGAAGGCTGTGGAAGCATATGGCAAAAGGTTTGAAGTAAAAACTGTTTCTGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000077221.6 ENSMUST00000109220.8 |
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| CDS CCA 72 bp | CATCCTTGGACTCCAGTCTCAGCTCACTTCTGCAGATaGCTTCCATATTGCCAGCTTCTGCATTTATTTCTA | + |
|
Preference number: 6 (lower is better) Translates to: HPWTPVSAHFCR*LPYCQLLHLFL Trigger: TAGAAATAAATGCAGAAGCTGGCAATATGGAAGCCATCTGCAGAAGTGAGCTGAGACTGGAGTCCAAGGATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000077221.6 |
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| CDS CAA 72 bp | TCATTGAGAATGTTCACTGTCACGTTCCTGGCAGATTaGAAGTATAGGGCATTACCTGGTCGGGACTTGATT | + |
|
Preference number: 6 (lower is better) Translates to: SLRMFTVTFLAD*KYRALPGRDLI Trigger: AATCAAGTCCCGACCAGGTAATGCCCTATACTTCAAATCTGCCAGGAACGTGACAGTGAACATTCTCAATGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077221.6 ENSMUST00000109220.8 |
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