Pregenerated sensors for SGCA (Mus musculus)
Ensembl gene IDs: ENSMUSG00000001508Ensembl transcript IDs: ENSMUST00000100551.11, ENSMUST00000103162.8, ENSMUST00000139855.8, ENSMUST00000152042.2, ENSMUST00000166320.8
Found 103 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCAGAATCCTCTCTCCCTTATCCTGACCCTCCAGCCCTGACTGGTTaGCAGTTGTGGCACAGTTCCAGTACTGTGAGCACCCATCTTGGC | + |
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Preference number: 1 (lower is better) Translates to: PESSLPYPDPPALTG*QLWHSSSTVSTHLG Trigger: GCCAAGATGGGTGCTCACAGTACTGGAACTGTGCCACAACTGCCAACCAGTCAGGGCTGGAGGGTCAGGATAAGGGAGAGAGGATTCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100551.11 ENSMUST00000103162.8 |
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| 3UTR-3UTR TCA 90 bp | CAGCCCTCCCTACACCATCTGTCTGCCTTTGTGGAGCCGGAGGTCCAAGTAGGCCTCTCTCCCTTATCCTaGCCCTCCAGCCCTGACTGG | + |
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Preference number: 2 (lower is better) Translates to: QPSLHHLSAFVEPEVQVGLSPLS*PSSPDW Trigger: CCAGTCAGGGCTGGAGGGTCAGGATAAGGGAGAGAG...GCCTACTTGGACCTCCGGCTCCACAAAGGCAGACAGATGGTGTAGGGAGGGCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100551.11 ENSMUST00000103162.8 |
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| 3UTR-3UTR GCA 90 bp | CAGCCCTCCCTACACCATCTGTCTGCCTTTGTGGAGCCGGAGGTCCAAGTAGGCAGCATCTCTGAGTGGTaGAGCTGGAGCTGGAGCCAT | + |
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Preference number: 2 (lower is better) Translates to: QPSLHHLSAFVEPEVQVGSISEW*SWSWSH Trigger: ATGGCTCCAGCTCCAGCTGCACCACTCAGAGATGCT...GCCTACTTGGACCTCCGGCTCCACAAAGGCAGACAGATGGTGTAGGGAGGGCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139855.8 |
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| 3UTR-3UTR CCA 90 bp | CTGAGTGGTGCAGCTGGAGCTGGAGCTACAAGGTCATGTAGAGGACAGAGTGGGCCCTCCAGCCCTGACTaGTTGGCAGTTGTGGCACAG | + |
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Preference number: 2 (lower is better) Translates to: LSGAAGAGATRSCRGQSGPSSPD*LAVVAQ Trigger: CTGTGCCACAACTGCCAACCAGTCAGGGCTGGAGGG...CCCACTCTGTCCTCTACATGACCTTGTAGCTCCAGCTCCAGCTGCACCACTCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100551.11 ENSMUST00000103162.8 |
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| 3UTR CAA 90 bp | TCCTCTCTCCCTTATCCTGACCCTCCAGCCCTGACTGGTTGGCAGTaGTGGCACAGTTCCAGTACTGTGAGCACCCATCTTGGCAGGGCT | + |
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Preference number: 2 (lower is better) Translates to: SSLPYPDPPALTGWQ*WHSSSTVSTHLGRA Trigger: AGCCCTGCCAAGATGGGTGCTCACAGTACTGGAACTGTGCCACAACTGCCAACCAGTCAGGGCTGGAGGGTCAGGATAAGGGAGAGAGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100551.11 ENSMUST00000103162.8 |
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| 3UTR-3UTR CCA 90 bp | TCTCTGAGTGGTGCAGCTGGAGCTGGAGCTACAAGGTCATGTAGAGGACAGAGTCCCTCCAGCCCTGACTaGTTGGCAGTTGTGGCACAG | + |
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Preference number: 2 (lower is better) Translates to: SLSGAAGAGATRSCRGQSPSSPD*LAVVAQ Trigger: CTGTGCCACAACTGCCAACCAGTCAGGGCTGGAGGG...ACTCTGTCCTCTACATGACCTTGTAGCTCCAGCTCCAGCTGCACCACTCAGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100551.11 ENSMUST00000103162.8 |
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| 3UTR-3UTR CCA 90 bp | ACACCATCTGTCTGCCTTTGTGGAGCCGGAGGTCCAAGTAGGCTAGGAGCTGGATCTGAGTGGTGCAGCTaGAGCTGGAGCTACAAGGTC | + |
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Preference number: 2 (lower is better) Translates to: TPSVCLCGAGGPSRLGAGSEWCS*SWSYKV Trigger: GACCTTGTAGCTCCAGCTCCAGCTGCACCACTCAGA...TCCAGCTCCTAGCCTACTTGGACCTCCGGCTCCACAAAGGCAGACAGATGGTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100551.11 ENSMUST00000103162.8 |
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| 3UTR-3UTR CCA 90 bp | GGAGCCGGAGGTCCAAGTAGGCTAGGAGCTGGAGTCAGTTGTAGACATATTCACTGGTGCAGCTGGAGCTaGAGCCATCTTGGCAGGGCT | + |
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Preference number: 2 (lower is better) Translates to: GAGGPSRLGAGVSCRHIHWCSWS*SHLGRA Trigger: AGCCCTGCCAAGATGGCTCCAGCTCCAGCTGCACCA...GTGAATATGTCTACAACTGACTCCAGCTCCTAGCCTACTTGGACCTCCGGCTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139855.8 |
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| 3UTR-3UTR CCA 90 bp | GGAGGTCCAAGTAGGCTAGGAGCTGGAGTCAGTTGTAGACATATTCACAGGTCATCTGAGTGGTGCAGCTaGAGCTGGAGCCATCTTGGC | + |
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Preference number: 2 (lower is better) Translates to: GGPSRLGAGVSCRHIHRSSEWCS*SWSHLG Trigger: GCCAAGATGGCTCCAGCTCCAGCTGCACCACTCAGA...TGACCTGTGAATATGTCTACAACTGACTCCAGCTCCTAGCCTACTTGGACCTCC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139855.8 |
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| 3UTR-3UTR CAA 90 bp | CTGAGTGGTGCAGCTGGAGCTGGAGCTACAAGGTCATGTAGAGGACAGAGTGGGTCCAGCCCTGACTGGTaGGCAGTTGTGGCACAGTTC | + |
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Preference number: 3 (lower is better) Translates to: LSGAAGAGATRSCRGQSGSSPDW*AVVAQF Trigger: GAACTGTGCCACAACTGCCAACCAGTCAGGGCTGGA...CCCACTCTGTCCTCTACATGACCTTGTAGCTCCAGCTCCAGCTGCACCACTCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100551.11 ENSMUST00000103162.8 |
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| 3UTR-3UTR CAA 90 bp | ACACCATCTGTCTGCCTTTGTGGAGCCGGAGGTCCAAGTAGGCTAGGAGCTGGATCCAGCCCTGACTGGTaGGCAGTTGTGGCACAGTTC | + |
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Preference number: 3 (lower is better) Translates to: TPSVCLCGAGGPSRLGAGSSPDW*AVVAQF Trigger: GAACTGTGCCACAACTGCCAACCAGTCAGGGCTGGA...TCCAGCTCCTAGCCTACTTGGACCTCCGGCTCCACAAAGGCAGACAGATGGTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100551.11 ENSMUST00000103162.8 |
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| 3UTR CCA 72 bp | TATCCTGACCCTCCAGCCCTGACTGGTTGGCAGTTGTaGCACAGTTCCAGTACTGTGAGCACCCATCTTGGC | + |
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Preference number: 3 (lower is better) Translates to: YPDPPALTGWQL*HSSSTVSTHLG Trigger: GCCAAGATGGGTGCTCACAGTACTGGAACTGTGCCACAACTGCCAACCAGTCAGGGCTGGAGGGTCAGGATA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100551.11 ENSMUST00000103162.8 |
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| CDS-3UTR GCA 90 bp | CCAGAATCCTCTCTCCCTTATCCTGACCCTCCAGCCCTGACTGGTTGGCAGTTGGGTGTCCCTCAGTCCTaGCAGGAGACCTGCCAGGAG | + |
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Preference number: 4 (lower is better) Translates to: PESSLPYPDPPALTGWQLGVPQS*QETCQE Trigger: CTCCTGGCAGGTCTCCTGGCAGGACTGAGGGACACC...CAACTGCCAACCAGTCAGGGCTGGAGGGTCAGGATAAGGGAGAGAGGATTCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100551.11 ENSMUST00000103162.8 |
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| CDS-3UTR CCA 90 bp | CAGCCCTCCCTACACCATCTGTCTGCCTTTGTGGAGCCGGAGGTCCAAGTAGGCCACGATCTTCTGGAGTaGGGGAGCCGTAGAGGAAGC | + |
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Preference number: 4 (lower is better) Translates to: QPSLHHLSAFVEPEVQVGHDLLE*GSRRGS Trigger: GCTTCCTCTACGGCTCCCCCACTCCAGAAGATCGTG...GCCTACTTGGACCTCCGGCTCCACAAAGGCAGACAGATGGTGTAGGGAGGGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100551.11 ENSMUST00000103162.8 |
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| CDS-3UTR CCA 90 bp | CCAGAATCCTCTCTCCCTTATCCTGACCCTCCAGCCCTGACTGGTTGGCAGTTGAGCGGTTGGCAGGTGTaGTGGGCAGCACCTCCTCCA | + |
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Preference number: 4 (lower is better) Translates to: PESSLPYPDPPALTGWQLSGWQV*WAAPPP Trigger: TGGAGGAGGTGCTGCCCACCACACCTGCCAACCGCT...CAACTGCCAACCAGTCAGGGCTGGAGGGTCAGGATAAGGGAGAGAGGATTCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100551.11 ENSMUST00000103162.8 |
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| CDS-3UTR CCA 90 bp | CAGCCCTCCCTACACCATCTGTCTGCCTTTGTGGAGCCGGAGGTCCAAGTAGGCGGAAGTCTCGGTCTGTaGCTTCAGTGGGTGGGCAGA | + |
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Preference number: 4 (lower is better) Translates to: QPSLHHLSAFVEPEVQVGGSLGL*LQWVGR Trigger: TCTGCCCACCCACTGAAGCCACAGACCGAGACTTCC...GCCTACTTGGACCTCCGGCTCCACAAAGGCAGACAGATGGTGTAGGGAGGGCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100551.11 ENSMUST00000103162.8 ENSMUST00000139855.8 |
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| CDS-3UTR GCA 90 bp | CAGCCCTCCCTACACCATCTGTCTGCCTTTGTGGAGCCGGAGGTCCAAGTAGGCCAGGGTTATAGGGACTaGGCTGTGTGTAGTGCAGCC | + |
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Preference number: 4 (lower is better) Translates to: QPSLHHLSAFVEPEVQVGQGYRD*AVCSAA Trigger: GGCTGCACTACACACAGCGCAGTCCCTATAACCCTG...GCCTACTTGGACCTCCGGCTCCACAAAGGCAGACAGATGGTGTAGGGAGGGCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100551.11 ENSMUST00000103162.8 |
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| CDS-3UTR GCA 90 bp | CAGCCCTCCCTACACCATCTGTCTGCCTTTGTGGAGCCGGAGGTCCAAGTAGGCCAGAAGAACGGGTCGTaGTCCAAGATCCCATCGCCT | + |
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Preference number: 4 (lower is better) Translates to: QPSLHHLSAFVEPEVQVGQKNGS*SKIPSP Trigger: AGGCGATGGGATCTTGGAGCACGACCCGTTCTTCTG...GCCTACTTGGACCTCCGGCTCCACAAAGGCAGACAGATGGTGTAGGGAGGGCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100551.11 ENSMUST00000103162.8 ENSMUST00000139855.8 |
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| CDS-3UTR CCA 90 bp | CAGCCCTCCCTACACCATCTGTCTGCCTTTGTGGAGCCGGAGGTCCAAGTAGGCACCAGGAACTCAGCTTaGTATGGCAACCGGGGACCT | + |
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Preference number: 4 (lower is better) Translates to: QPSLHHLSAFVEPEVQVGTRNSA*YGNRGP Trigger: AGGTCCCCGGTTGCCATACCAAGCTGAGTTCCTGGT...GCCTACTTGGACCTCCGGCTCCACAAAGGCAGACAGATGGTGTAGGGAGGGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100551.11 ENSMUST00000103162.8 |
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| CDS-3UTR CCA 90 bp | CCTGACTGGTTGGCAGTTGTGGCACAGTTCCAGTACTGTGAGCACCCATCTTGGAGCGGTTGGCAGGTGTaGTGGGCAGCACCTCCTCCA | + |
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Preference number: 4 (lower is better) Translates to: PDWLAVVAQFQYCEHPSWSGWQV*WAAPPP Trigger: TGGAGGAGGTGCTGCCCACCACACCTGCCAACCGCT...CCAAGATGGGTGCTCACAGTACTGGAACTGTGCCACAACTGCCAACCAGTCAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100551.11 ENSMUST00000103162.8 |
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| CDS-3UTR CCA 90 bp | GGAGCCGGAGGTCCAAGTAGGCTAGGAGCTGGAGTCAGTTGTAGACATATTCACGGGGCACCTCTCGGCTaGCTGCCATCTGCCGAAGCT | + |
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Preference number: 4 (lower is better) Translates to: GAGGPSRLGAGVSCRHIHGAPLG*LPSAEA Trigger: AGCTTCGGCAGATGGCAGCCAGCCGAGAGGTGCCCC...GTGAATATGTCTACAACTGACTCCAGCTCCTAGCCTACTTGGACCTCCGGCTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100551.11 ENSMUST00000103162.8 ENSMUST00000139855.8 |
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| CDS-3UTR TCA 90 bp | TCTCTCCCTTATCCTGACCCTCCAGCCCTGACTGGTTGGCAGTTGTGGCACAGTGTGATGTTGAGCAGCTaGAGCTCTCCTGGCTCCCAC | + |
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Preference number: 4 (lower is better) Translates to: SLPYPDPPALTGWQLWHSVMLSS*SSPGSH Trigger: GTGGGAGCCAGGAGAGCTTCAGCTGCTCAACATCAC...ACTGTGCCACAACTGCCAACCAGTCAGGGCTGGAGGGTCAGGATAAGGGAGAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100551.11 ENSMUST00000103162.8 |
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| CDS-3UTR CCA 90 bp | GGTTGGCAGTTGTGGCACAGTTCCAGTACTGTGAGCACCCATCTTGGCAGGGCTTGTAGTGCAGCCACCTaGGCAGGTCTGGATGTCCCT | + |
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Preference number: 4 (lower is better) Translates to: GWQLWHSSSTVSTHLGRACSAAT*AGLDVP Trigger: AGGGACATCCAGACCTGCCCAGGTGGCTGCACTACA...AGCCCTGCCAAGATGGGTGCTCACAGTACTGGAACTGTGCCACAACTGCCAACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100551.11 ENSMUST00000103162.8 |
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| CDS-3UTR CCA 90 bp | ACACCATCTGTCTGCCTTTGTGGAGCCGGAGGTCCAAGTAGGCTAGGAGCTGGATGTGGCTTCAGTGGGTaGGCAGAAGAACGGGTCGTG | + |
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Preference number: 4 (lower is better) Translates to: TPSVCLCGAGGPSRLGAGCGFSG*AEERVV Trigger: CACGACCCGTTCTTCTGCCCACCCACTGAAGCCACA...TCCAGCTCCTAGCCTACTTGGACCTCCGGCTCCACAAAGGCAGACAGATGGTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100551.11 ENSMUST00000103162.8 ENSMUST00000139855.8 |
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| CDS-3UTR CCA 90 bp | CTGAGTGGTGCAGCTGGAGCTGGAGCTACAAGGTCATGTAGAGGACAGAGTGGGTGTGGCTTCAGTGGGTaGGCAGAAGAACGGGTCGTG | + |
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Preference number: 4 (lower is better) Translates to: LSGAAGAGATRSCRGQSGCGFSG*AEERVV Trigger: CACGACCCGTTCTTCTGCCCACCCACTGAAGCCACA...CCCACTCTGTCCTCTACATGACCTTGTAGCTCCAGCTCCAGCTGCACCACTCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100551.11 ENSMUST00000103162.8 |
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| CDS-3UTR CCA 90 bp | CTCCCTACACCATCTGTCTGCCTTTGTGGAGCCGGAGGTCCAAGTAGGCTAGGAGGTCTGTGGCTTCAGTaGGTGGGCAGAAGAACGGGT | + |
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Preference number: 4 (lower is better) Translates to: LPTPSVCLCGAGGPSRLGGLWLQ*VGRRTG Trigger: ACCCGTTCTTCTGCCCACCCACTGAAGCCACAGACC...TCCTAGCCTACTTGGACCTCCGGCTCCACAAAGGCAGACAGATGGTGTAGGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100551.11 ENSMUST00000103162.8 ENSMUST00000139855.8 |
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| CDS-3UTR TCA 90 bp | ACTGGTTGGCAGTTGTGGCACAGTTCCAGTACTGTGAGCACCCATCTTGGCAGGGTGATGTTGAGCAGCTaGAGCTCTCCTGGCTCCCAC | + |
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Preference number: 4 (lower is better) Translates to: TGWQLWHSSSTVSTHLGRVMLSS*SSPGSH Trigger: GTGGGAGCCAGGAGAGCTTCAGCTGCTCAACATCAC...CCTGCCAAGATGGGTGCTCACAGTACTGGAACTGTGCCACAACTGCCAACCAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100551.11 ENSMUST00000103162.8 |
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| CDS-3UTR GCA 90 bp | CCAGAATCCTCTCTCCCTTATCCTGACCCTCCAGCCCTGACTGGTTGGCAGTTGTCCTGCCAGGAGACCTaGCAGGAGAGGTATCCAAGT | + |
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Preference number: 4 (lower is better) Translates to: PESSLPYPDPPALTGWQLSCQET*QERYPS Trigger: ACTTGGATACCTCTCCTGGCAGGTCTCCTGGCAGGA...CAACTGCCAACCAGTCAGGGCTGGAGGGTCAGGATAAGGGAGAGAGGATTCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100551.11 ENSMUST00000103162.8 |
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| CDS-3UTR GCA 90 bp | CTGAGTGGTGCAGCTGGAGCTGGAGCTACAAGGTCATGTAGAGGACAGAGTGGGTCCTGCCAGGAGACCTaGCAGGAGAGGTATCCAAGT | + |
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Preference number: 4 (lower is better) Translates to: LSGAAGAGATRSCRGQSGSCQET*QERYPS Trigger: ACTTGGATACCTCTCCTGGCAGGTCTCCTGGCAGGA...CCCACTCTGTCCTCTACATGACCTTGTAGCTCCAGCTCCAGCTGCACCACTCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100551.11 ENSMUST00000103162.8 |
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| CDS-3UTR GCA 90 bp | TCTCTCCCTTATCCTGACCCTCCAGCCCTGACTGGTTGGCAGTTGTGGCACAGTAACGCGGAAGTGGGGTaGCAAAGTGTCGTAGCAGGA | + |
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Preference number: 4 (lower is better) Translates to: SLPYPDPPALTGWQLWHSNAEVG*QSVVAG Trigger: TCCTGCTACGACACTTTGGCACCCCACTTCCGCGTT...ACTGTGCCACAACTGCCAACCAGTCAGGGCTGGAGGGTCAGGATAAGGGAGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100551.11 ENSMUST00000103162.8 |
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| CDS-3UTR GCA 90 bp | GGTTGGCAGTTGTGGCACAGTTCCAGTACTGTGAGCACCCATCTTGGCAGGGCTAACGCGGAAGTGGGGTaGCAAAGTGTCGTAGCAGGA | + |
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Preference number: 4 (lower is better) Translates to: GWQLWHSSSTVSTHLGRANAEVG*QSVVAG Trigger: TCCTGCTACGACACTTTGGCACCCCACTTCCGCGTT...AGCCCTGCCAAGATGGGTGCTCACAGTACTGGAACTGTGCCACAACTGCCAACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100551.11 ENSMUST00000103162.8 |
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| CDS-3UTR CCA 90 bp | CCTGACTGGTTGGCAGTTGTGGCACAGTTCCAGTACTGTGAGCACCCATCTTGGGGTCTGTGGCTTCAGTaGGTGGGCAGAAGAACGGGT | + |
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Preference number: 4 (lower is better) Translates to: PDWLAVVAQFQYCEHPSWGLWLQ*VGRRTG Trigger: ACCCGTTCTTCTGCCCACCCACTGAAGCCACAGACC...CCAAGATGGGTGCTCACAGTACTGGAACTGTGCCACAACTGCCAACCAGTCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100551.11 ENSMUST00000103162.8 |
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| CDS-3UTR CCA 90 bp | CTGAGTGGTGCAGCTGGAGCTGGAGCTACAAGGTCATGTAGAGGACAGAGTGGGCAAGATCCCATCGCCTaGAGTAGGTACCTCATCCAG | + |
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Preference number: 4 (lower is better) Translates to: LSGAAGAGATRSCRGQSGQDPIA*SRYLIQ Trigger: CTGGATGAGGTACCTACTCCAGGCGATGGGATCTTG...CCCACTCTGTCCTCTACATGACCTTGTAGCTCCAGCTCCAGCTGCACCACTCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100551.11 ENSMUST00000103162.8 |
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| CDS-3UTR CCA 90 bp | GGAGCCGGAGGTCCAAGTAGGCTAGGAGCTGGAGTCAGTTGTAGACATATTCACGGTCTGTGGCTTCAGTaGGTGGGCAGAAGAACGGGT | + |
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Preference number: 4 (lower is better) Translates to: GAGGPSRLGAGVSCRHIHGLWLQ*VGRRTG Trigger: ACCCGTTCTTCTGCCCACCCACTGAAGCCACAGACC...GTGAATATGTCTACAACTGACTCCAGCTCCTAGCCTACTTGGACCTCCGGCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100551.11 ENSMUST00000103162.8 ENSMUST00000139855.8 |
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| CDS-3UTR CCA 90 bp | GGAGCCGGAGGTCCAAGTAGGCTAGGAGCTGGAGTCAGTTGTAGACATATTCACGGAAGTCTCGGTCTGTaGCTTCAGTGGGTGGGCAGA | + |
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Preference number: 4 (lower is better) Translates to: GAGGPSRLGAGVSCRHIHGSLGL*LQWVGR Trigger: TCTGCCCACCCACTGAAGCCACAGACCGAGACTTCC...GTGAATATGTCTACAACTGACTCCAGCTCCTAGCCTACTTGGACCTCCGGCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100551.11 ENSMUST00000103162.8 ENSMUST00000139855.8 |
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| CDS-3UTR CCA 90 bp | CTGAGTGGTGCAGCTGGAGCTGGAGCTACAAGGTCATGTAGAGGACAGAGTGGGTCTGGATGTCAGAGGTaGCCATGTCTCTCTTCAGCC | + |
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Preference number: 4 (lower is better) Translates to: LSGAAGAGATRSCRGQSGSGCQR*PCLSSA Trigger: GGCTGAAGAGAGACATGGCCACCTCTGACATCCAGA...CCCACTCTGTCCTCTACATGACCTTGTAGCTCCAGCTCCAGCTGCACCACTCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100551.11 ENSMUST00000103162.8 |
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| CDS-3UTR CCA 90 bp | CCAAGTAGGCTAGGAGCTGGAGTCAGTTGTAGACATATTCACAGGTCAGCATCTGGGGCACCTCTCGGCTaGCTGCCATCTGCCGAAGCT | + |
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Preference number: 4 (lower is better) Translates to: PSRLGAGVSCRHIHRSASGAPLG*LPSAEA Trigger: AGCTTCGGCAGATGGCAGCCAGCCGAGAGGTGCCCC...AGATGCTGACCTGTGAATATGTCTACAACTGACTCCAGCTCCTAGCCTACTTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100551.11 ENSMUST00000103162.8 ENSMUST00000139855.8 |
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| CDS-3UTR CCA 90 bp | AGTAGGCTAGGAGCTGGAGTCAGTTGTAGACATATTCACAGGTCAGCATCTCTGGGGGCACCTCTCGGCTaGCTGCCATCTGCCGAAGCT | + |
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Preference number: 4 (lower is better) Translates to: SRLGAGVSCRHIHRSASLGAPLG*LPSAEA Trigger: AGCTTCGGCAGATGGCAGCCAGCCGAGAGGTGCCCC...CAGAGATGCTGACCTGTGAATATGTCTACAACTGACTCCAGCTCCTAGCCTACT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000100551.11 ENSMUST00000103162.8 ENSMUST00000139855.8 |
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| 3UTR CAA 72 bp | CCTTATCCTGACCCTCCAGCCCTGACTGGTTGGCAGTaGTGGCACAGTTCCAGTACTGTGAGCACCCATCTT | + |
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Preference number: 4 (lower is better) Translates to: PYPDPPALTGWQ*WHSSSTVSTHL Trigger: AAGATGGGTGCTCACAGTACTGGAACTGTGCCACAACTGCCAACCAGTCAGGGCTGGAGGGTCAGGATAAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100551.11 ENSMUST00000103162.8 |
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| CDS-3UTR GCA 90 bp | CCAAGTAGGCTAGGAGCTGGAGTCAGTTGTAGACATATTCACAGGTCAGCATCTGGTGTCCCTCAGTCCTaGCAGGAGACCTGCCAGGAG | + |
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Preference number: 4 (lower is better) Translates to: PSRLGAGVSCRHIHRSASGVPQS*QETCQE Trigger: CTCCTGGCAGGTCTCCTGGCAGGACTGAGGGACACC...AGATGCTGACCTGTGAATATGTCTACAACTGACTCCAGCTCCTAGCCTACTTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100551.11 ENSMUST00000103162.8 |
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| CDS-3UTR GCA 90 bp | CTGAGTGGTGCAGCTGGAGCTGGAGCTACAAGGTCATGTAGAGGACAGAGTGGGCTACCAGAGACACATTaGACCAGTCAACGCGGAAGT | + |
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Preference number: 4 (lower is better) Translates to: LSGAAGAGATRSCRGQSGLPETH*TSQRGS Trigger: ACTTCCGCGTTGACTGGTGCAATGTGTCTCTGGTAG...CCCACTCTGTCCTCTACATGACCTTGTAGCTCCAGCTCCAGCTGCACCACTCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100551.11 ENSMUST00000103162.8 |
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| CDS-3UTR GCA 90 bp | GGAGCCGGAGGTCCAAGTAGGCTAGGAGCTGGAGTCAGTTGTAGACATATTCACCAGAAGAACGGGTCGTaGTCCAAGATCCCATCGCCT | + |
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Preference number: 4 (lower is better) Translates to: GAGGPSRLGAGVSCRHIHQKNGS*SKIPSP Trigger: AGGCGATGGGATCTTGGAGCACGACCCGTTCTTCTG...GTGAATATGTCTACAACTGACTCCAGCTCCTAGCCTACTTGGACCTCCGGCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100551.11 ENSMUST00000103162.8 ENSMUST00000139855.8 |
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| CDS-3UTR CCA 90 bp | ACTGGTTGGCAGTTGTGGCACAGTTCCAGTACTGTGAGCACCCATCTTGGCAGGGAAGGCGCAGGAAGGTaGCATGTTCCAAAGGATGCA | + |
|
Preference number: 4 (lower is better) Translates to: TGWQLWHSSSTVSTHLGREGAGR*HVPKDA Trigger: TGCATCCTTTGGAACATGCCACCTTCCTGCGCCTTC...CCTGCCAAGATGGGTGCTCACAGTACTGGAACTGTGCCACAACTGCCAACCAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100551.11 ENSMUST00000103162.8 |
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| CDS-3UTR CCA 90 bp | CCAGAATCCTCTCTCCCTTATCCTGACCCTCCAGCCCTGACTGGTTGGCAGTTGGTGACCTCGATGACTTaGTACCCACGATCTTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: PESSLPYPDPPALTGWQLVTSMT*YPRSSG Trigger: TCCAGAAGATCGTGGGTACCAAGTCATCGAGGTCAC...CAACTGCCAACCAGTCAGGGCTGGAGGGTCAGGATAAGGGAGAGAGGATTCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100551.11 ENSMUST00000103162.8 |
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| CDS-3UTR TCA 90 bp | GGTTGGCAGTTGTGGCACAGTTCCAGTACTGTGAGCACCCATCTTGGCAGGGCTTGGATGGAACAGTGGTaGAACATCTGGATGTCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: GWQLWHSSSTVSTHLGRAWMEQW*NIWMSE Trigger: CTCTGACATCCAGATGTTTCACCACTGTTCCATCCA...AGCCCTGCCAAGATGGGTGCTCACAGTACTGGAACTGTGCCACAACTGCCAACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100551.11 ENSMUST00000103162.8 |
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| CDS-3UTR GCA 90 bp | CTCCCTACACCATCTGTCTGCCTTTGTGGAGCCGGAGGTCCAAGTAGGCTAGGAGCATGTTCCAAAGGATaGACAAACACACGACCCACA | + |
|
Preference number: 4 (lower is better) Translates to: LPTPSVCLCGAGGPSRLGACSKG*TNTRPT Trigger: TGTGGGTCGTGTGTTTGTGCATCCTTTGGAACATGC...TCCTAGCCTACTTGGACCTCCGGCTCCACAAAGGCAGACAGATGGTGTAGGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100551.11 ENSMUST00000103162.8 |
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| CDS-3UTR GCA 90 bp | CCTGACTGGTTGGCAGTTGTGGCACAGTTCCAGTACTGTGAGCACCCATCTTGGCTACCAGAGACACATTaGACCAGTCAACGCGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: PDWLAVVAQFQYCEHPSWLPETH*TSQRGS Trigger: ACTTCCGCGTTGACTGGTGCAATGTGTCTCTGGTAG...CCAAGATGGGTGCTCACAGTACTGGAACTGTGCCACAACTGCCAACCAGTCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100551.11 ENSMUST00000103162.8 |
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| CDS-3UTR CCA 90 bp | ACTGGTTGGCAGTTGTGGCACAGTTCCAGTACTGTGAGCACCCATCTTGGCAGGTGTAAAGTTGTCTGCTaGGCCTTGGTGTCCCTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: TGWQLWHSSSTVSTHLGRCKVVC*ALVSLS Trigger: ACTGAGGGACACCAAGGCCCAGCAGACAACTTTACA...CCTGCCAAGATGGGTGCTCACAGTACTGGAACTGTGCCACAACTGCCAACCAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100551.11 ENSMUST00000103162.8 |
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| CDS-3UTR CCA 90 bp | CCTGACTGGTTGGCAGTTGTGGCACAGTTCCAGTACTGTGAGCACCCATCTTGGTGTAAAGTTGTCTGCTaGGCCTTGGTGTCCCTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: PDWLAVVAQFQYCEHPSWCKVVC*ALVSLS Trigger: ACTGAGGGACACCAAGGCCCAGCAGACAACTTTACA...CCAAGATGGGTGCTCACAGTACTGGAACTGTGCCACAACTGCCAACCAGTCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100551.11 ENSMUST00000103162.8 |
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| CDS-3UTR CCA 90 bp | GTCAGTTGTAGACATATTCACAGGTCAGCATCTCTGAGTGGTGCAGCTGGAGCTCACGATCTTCTGGAGTaGGGGAGCCGTAGAGGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: VSCRHIHRSASLSGAAGAHDLLE*GSRRGS Trigger: GCTTCCTCTACGGCTCCCCCACTCCAGAAGATCGTG...AGCTCCAGCTGCACCACTCAGAGATGCTGACCTGTGAATATGTCTACAACTGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100551.11 ENSMUST00000103162.8 |
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| CDS-3UTR CCA 90 bp | GTCAGTTGTAGACATATTCACAGGTCAGCATCTCTGAGTGGTGCAGCTGGAGCTGGAAGTCTCGGTCTGTaGCTTCAGTGGGTGGGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: VSCRHIHRSASLSGAAGAGSLGL*LQWVGR Trigger: TCTGCCCACCCACTGAAGCCACAGACCGAGACTTCC...AGCTCCAGCTGCACCACTCAGAGATGCTGACCTGTGAATATGTCTACAACTGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100551.11 ENSMUST00000103162.8 ENSMUST00000139855.8 |
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| CDS-3UTR CCA 90 bp | GGAGCCGGAGGTCCAAGTAGGCTAGGAGCTGGAGTCAGTTGTAGACATATTCACTCTGGATGTCAGAGGTaGCCATGTCTCTCTTCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: GAGGPSRLGAGVSCRHIHSGCQR*PCLSSA Trigger: GGCTGAAGAGAGACATGGCCACCTCTGACATCCAGA...GTGAATATGTCTACAACTGACTCCAGCTCCTAGCCTACTTGGACCTCCGGCTCC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100551.11 ENSMUST00000103162.8 ENSMUST00000139855.8 |
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| CDS-3UTR GCA 90 bp | GTCAGTTGTAGACATATTCACAGGTCAGCATCTCTGAGTGGTGCAGCTGGAGCTCAGAAGAACGGGTCGTaGTCCAAGATCCCATCGCCT | + |
|
Preference number: 4 (lower is better) Translates to: VSCRHIHRSASLSGAAGAQKNGS*SKIPSP Trigger: AGGCGATGGGATCTTGGAGCACGACCCGTTCTTCTG...AGCTCCAGCTGCACCACTCAGAGATGCTGACCTGTGAATATGTCTACAACTGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100551.11 ENSMUST00000103162.8 ENSMUST00000139855.8 |
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| CDS-3UTR CCA 90 bp | CCAAGTAGGCTAGGAGCTGGAGTCAGTTGTAGACATATTCACAGGTCAGCATCTGTACCCACGATCTTCTaGAGTGGGGGAGCCGTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: PSRLGAGVSCRHIHRSASVPTIF*SGGAVE Trigger: CTCTACGGCTCCCCCACTCCAGAAGATCGTGGGTAC...AGATGCTGACCTGTGAATATGTCTACAACTGACTCCAGCTCCTAGCCTACTTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000100551.11 ENSMUST00000103162.8 |
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| CDS-3UTR CCA 90 bp | AGTAGGCTAGGAGCTGGAGTCAGTTGTAGACATATTCACAGGTCAGCATCTCTGGTACCCACGATCTTCTaGAGTGGGGGAGCCGTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: SRLGAGVSCRHIHRSASLVPTIF*SGGAVE Trigger: CTCTACGGCTCCCCCACTCCAGAAGATCGTGGGTAC...CAGAGATGCTGACCTGTGAATATGTCTACAACTGACTCCAGCTCCTAGCCTACT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000100551.11 ENSMUST00000103162.8 |
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| CDS-3UTR CCA 90 bp | AGTAGGCTAGGAGCTGGAGTCAGTTGTAGACATATTCACAGGTCAGCATCTCTGTGTGGCTTCAGTGGGTaGGCAGAAGAACGGGTCGTG | + |
|
Preference number: 4 (lower is better) Translates to: SRLGAGVSCRHIHRSASLCGFSG*AEERVV Trigger: CACGACCCGTTCTTCTGCCCACCCACTGAAGCCACA...CAGAGATGCTGACCTGTGAATATGTCTACAACTGACTCCAGCTCCTAGCCTACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100551.11 ENSMUST00000103162.8 ENSMUST00000139855.8 |
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| CDS-3UTR TCA 90 bp | TCTCTGAGTGGTGCAGCTGGAGCTGGAGCTACAAGGTCATGTAGAGGACAGAGTTGGATGGAACAGTGGTaGAACATCTGGATGTCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: SLSGAAGAGATRSCRGQSWMEQW*NIWMSE Trigger: CTCTGACATCCAGATGTTTCACCACTGTTCCATCCA...ACTCTGTCCTCTACATGACCTTGTAGCTCCAGCTCCAGCTGCACCACTCAGAGA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100551.11 ENSMUST00000103162.8 |
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| CDS-3UTR GCA 90 bp | AGTAGGCTAGGAGCTGGAGTCAGTTGTAGACATATTCACAGGTCAGCATCTCTGCAGGGTTATAGGGACTaGGCTGTGTGTAGTGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: SRLGAGVSCRHIHRSASLQGYRD*AVCSAA Trigger: GGCTGCACTACACACAGCGCAGTCCCTATAACCCTG...CAGAGATGCTGACCTGTGAATATGTCTACAACTGACTCCAGCTCCTAGCCTACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100551.11 ENSMUST00000103162.8 |
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| CDS-3UTR CCA 90 bp | GGAGGTCCAAGTAGGCTAGGAGCTGGAGTCAGTTGTAGACATATTCACAGGTCATCTGGATGTCAGAGGTaGCCATGTCTCTCTTCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: GGPSRLGAGVSCRHIHRSSGCQR*PCLSSA Trigger: GGCTGAAGAGAGACATGGCCACCTCTGACATCCAGA...TGACCTGTGAATATGTCTACAACTGACTCCAGCTCCTAGCCTACTTGGACCTCC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100551.11 ENSMUST00000103162.8 ENSMUST00000139855.8 |
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| CDS-3UTR CCA 90 bp | CCAAGTAGGCTAGGAGCTGGAGTCAGTTGTAGACATATTCACAGGTCAGCATCTGAAGGCGCAGGAAGGTaGCATGTTCCAAAGGATGCA | + |
|
Preference number: 4 (lower is better) Translates to: PSRLGAGVSCRHIHRSASEGAGR*HVPKDA Trigger: TGCATCCTTTGGAACATGCCACCTTCCTGCGCCTTC...AGATGCTGACCTGTGAATATGTCTACAACTGACTCCAGCTCCTAGCCTACTTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100551.11 ENSMUST00000103162.8 |
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| CDS-3UTR CCA 90 bp | GGAGGTCCAAGTAGGCTAGGAGCTGGAGTCAGTTGTAGACATATTCACAGGTCAGTGACCTCGATGACTTaGTACCCACGATCTTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: GGPSRLGAGVSCRHIHRSVTSMT*YPRSSG Trigger: TCCAGAAGATCGTGGGTACCAAGTCATCGAGGTCAC...TGACCTGTGAATATGTCTACAACTGACTCCAGCTCCTAGCCTACTTGGACCTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100551.11 ENSMUST00000103162.8 |
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| CDS-3UTR CCA 90 bp | CCAAGTAGGCTAGGAGCTGGAGTCAGTTGTAGACATATTCACAGGTCAGCATCTCAAGATCCCATCGCCTaGAGTAGGTACCTCATCCAG | + |
|
Preference number: 4 (lower is better) Translates to: PSRLGAGVSCRHIHRSASQDPIA*SRYLIQ Trigger: CTGGATGAGGTACCTACTCCAGGCGATGGGATCTTG...AGATGCTGACCTGTGAATATGTCTACAACTGACTCCAGCTCCTAGCCTACTTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100551.11 ENSMUST00000103162.8 ENSMUST00000139855.8 |
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| CDS-3UTR CCA 90 bp | AGTAGGCTAGGAGCTGGAGTCAGTTGTAGACATATTCACAGGTCAGCATCTCTGCAAGATCCCATCGCCTaGAGTAGGTACCTCATCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SRLGAGVSCRHIHRSASLQDPIA*SRYLIQ Trigger: CTGGATGAGGTACCTACTCCAGGCGATGGGATCTTG...CAGAGATGCTGACCTGTGAATATGTCTACAACTGACTCCAGCTCCTAGCCTACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100551.11 ENSMUST00000103162.8 ENSMUST00000139855.8 |
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| CDS-3UTR TCA 90 bp | CCAAGTAGGCTAGGAGCTGGAGTCAGTTGTAGACATATTCACAGGTCAGCATCTTGGATGGAACAGTGGTaGAACATCTGGATGTCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: PSRLGAGVSCRHIHRSASWMEQW*NIWMSE Trigger: CTCTGACATCCAGATGTTTCACCACTGTTCCATCCA...AGATGCTGACCTGTGAATATGTCTACAACTGACTCCAGCTCCTAGCCTACTTGG 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100551.11 ENSMUST00000103162.8 ENSMUST00000139855.8 |
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| CDS TCA 90 bp | GCCACCTGGGCAGGTCTGGATGTCCCTGGAGGTGAGCGTGGTAGGTaGGTCGGACAGTGGGTGGCACCGCAACGTGTTCTGGAAGGCGCA | + |
|
Preference number: 5 (lower is better) Translates to: ATWAGLDVPGGERGR*VGQWVAPQRVLEGA Trigger: TGCGCCTTCCAGAACACGTTGCGGTGCCACCCACTGTCCGACTCACCTACCACGCTCACCTCCAGGGACATCCAGACCTGCCCAGGTGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000100551.11 ENSMUST00000103162.8 ENSMUST00000152042.2 ENSMUST00000166320.8 |
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| CDS GCA 90 bp | AGCGGTTGGCAGGTGTGGTGGGCAGCACCTCCTCCACATCATGGCTaGGCACCAGGAACTCAGCTTGGTATGGCAACCGGGGACCTTCGG | + |
|
Preference number: 5 (lower is better) Translates to: SGWQVWWAAPPPHHG*APGTQLGMATGDLR Trigger: CCGAAGGTCCCCGGTTGCCATACCAAGCTGAGTTCCTGGTGCGCAGCCATGATGTGGAGGAGGTGCTGCCCACCACACCTGCCAACCGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100551.11 ENSMUST00000103162.8 ENSMUST00000166320.8 |
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| CDS CCA 90 bp | AGGAAGCGGTTGGCAGGTGTGGTGGGCAGCACCTCCTCCACATCATaGCTGCGCACCAGGAACTCAGCTTGGTATGGCAACCGGGGACCT | + |
|
Preference number: 5 (lower is better) Translates to: RKRLAGVVGSTSSTS*LRTRNSAWYGNRGP Trigger: AGGTCCCCGGTTGCCATACCAAGCTGAGTTCCTGGTGCGCAGCCATGATGTGGAGGAGGTGCTGCCCACCACACCTGCCAACCGCTTCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100551.11 ENSMUST00000103162.8 ENSMUST00000166320.8 |
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| CDS-3UTR CAA 90 bp | ACACCATCTGTCTGCCTTTGTGGAGCCGGAGGTCCAAGTAGGCTAGGAGCTGGAGCGGTGAGGAAGCGGTaGGCAGGTGTGGTGGGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: TPSVCLCGAGGPSRLGAGAVRKR*AGVVGS Trigger: GCTGCCCACCACACCTGCCAACCGCTTCCTCACCGC...TCCAGCTCCTAGCCTACTTGGACCTCCGGCTCCACAAAGGCAGACAGATGGTGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100551.11 ENSMUST00000103162.8 |
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| CDS GCA 90 bp | CTTCTGGAGTGGGGGAGCCGTAGAGGAAGCCAGGGTTATAGGGACTaGGCTGTGTGTAGTGCAGCCACCTGGGCAGGTCTGGATGTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: LLEWGSRRGSQGYRD*AVCSAATWAGLDVP Trigger: AGGGACATCCAGACCTGCCCAGGTGGCTGCACTACACACAGCGCAGTCCCTATAACCCTGGCTTCCTCTACGGCTCCCCCACTCCAGAAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000100551.11 ENSMUST00000103162.8 ENSMUST00000152042.2 ENSMUST00000166320.8 |
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| CDS CCA 90 bp | TGGATGTCCCTGGAGGTGAGCGTGGTAGGTGAGTCGGACAGTGGGTaGCACCGCAACGTGTTCTGGAAGGCGCAGGAAGGTGGCATGTTC | + |
|
Preference number: 5 (lower is better) Translates to: WMSLEVSVVGESDSG*HRNVFWKAQEGGMF Trigger: GAACATGCCACCTTCCTGCGCCTTCCAGAACACGTTGCGGTGCCACCCACTGTCCGACTCACCTACCACGCTCACCTCCAGGGACATCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000100551.11 ENSMUST00000103162.8 ENSMUST00000152042.2 ENSMUST00000166320.8 |
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| CDS CCA 90 bp | GTTATAGGGACTGCGCTGTGTGTAGTGCAGCCACCTGGGCAGGTCTaGATGTCCCTGGAGGTGAGCGTGGTAGGTGAGTCGGACAGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: VIGTALCVVQPPGQV*MSLEVSVVGESDSG Trigger: CCCACTGTCCGACTCACCTACCACGCTCACCTCCAGGGACATCCAGACCTGCCCAGGTGGCTGCACTACACACAGCGCAGTCCCTATAAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000100551.11 ENSMUST00000103162.8 ENSMUST00000152042.2 ENSMUST00000166320.8 |
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| CDS GCA 90 bp | AAGTCTCGGTCTGTGGCTTCAGTGGGTGGGCAGAAGAACGGGTCGTaGTCCAAGATCCCATCGCCTGGAGTAGGTACCTCATCCAGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: KSRSVASVGGQKNGS*SKIPSPGVGTSSRG Trigger: GCCCCTGGATGAGGTACCTACTCCAGGCGATGGGATCTTGGAGCACGACCCGTTCTTCTGCCCACCCACTGAAGCCACAGACCGAGACTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000100551.11 ENSMUST00000103162.8 ENSMUST00000139855.8 ENSMUST00000166320.8 |
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| CDS CCA 90 bp | GGGTCACCAAGGCATCTGTCAGGAAGTCTCGGTCTGTGGCTTCAGTaGGTGGGCAGAAGAACGGGTCGTGCTCCAAGATCCCATCGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: GSPRHLSGSLGLWLQ*VGRRTGRAPRSHRL Trigger: CAGGCGATGGGATCTTGGAGCACGACCCGTTCTTCTGCCCACCCACTGAAGCCACAGACCGAGACTTCCTGACAGATGCCTTGGTGACCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000100551.11 ENSMUST00000103162.8 ENSMUST00000139855.8 ENSMUST00000166320.8 |
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| CDS-3UTR CAA 90 bp | CTGAGTGGTGCAGCTGGAGCTGGAGCTACAAGGTCATGTAGAGGACAGAGTGGGGTTGTCTGCTGGGCCTaGGTGTCCCTCAGTCCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: LSGAAGAGATRSCRGQSGVVCWA*VSLSPA Trigger: GGCAGGACTGAGGGACACCAAGGCCCAGCAGACAAC...CCCACTCTGTCCTCTACATGACCTTGTAGCTCCAGCTCCAGCTGCACCACTCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100551.11 ENSMUST00000103162.8 |
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| CDS CCA 90 bp | CACCAAGGCATCTGTCAGGAAGTCTCGGTCTGTGGCTTCAGTGGGTaGGCAGAAGAACGGGTCGTGCTCCAAGATCCCATCGCCTGGAGT | + |
|
Preference number: 5 (lower is better) Translates to: HQGICQEVSVCGFSG*AEERVVLQDPIAWS Trigger: ACTCCAGGCGATGGGATCTTGGAGCACGACCCGTTCTTCTGCCCACCCACTGAAGCCACAGACCGAGACTTCCTGACAGATGCCTTGGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000100551.11 ENSMUST00000103162.8 ENSMUST00000139855.8 ENSMUST00000166320.8 |
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| CDS CCA 90 bp | GCACCAAGAGGGTCACCAAGGCATCTGTCAGGAAGTCTCGGTCTGTaGCTTCAGTGGGTGGGCAGAAGAACGGGTCGTGCTCCAAGATCC | + |
|
Preference number: 5 (lower is better) Translates to: APRGSPRHLSGSLGL*LQWVGRRTGRAPRS Trigger: GGATCTTGGAGCACGACCCGTTCTTCTGCCCACCCACTGAAGCCACAGACCGAGACTTCCTGACAGATGCCTTGGTGACCCTCTTGGTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000100551.11 ENSMUST00000103162.8 ENSMUST00000139855.8 ENSMUST00000166320.8 |
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| CDS GCA 90 bp | CCTCATCCAGGGGCTCGGGTACTGACTTGTCTACCAGAGACACATTaGACCAGTCAACGCGGAAGTGGGGTGCCAAAGTGTCGTAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: PHPGARVLTCLPETH*TSQRGSGVPKCRSR Trigger: CCTGCTACGACACTTTGGCACCCCACTTCCGCGTTGACTGGTGCAATGTGTCTCTGGTAGACAAGTCAGTACCCGAGCCCCTGGATGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000100551.11 ENSMUST00000103162.8 ENSMUST00000166320.8 |
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| CDS GCA 90 bp | AAACATGGGCAAGGTGGAAAGAGGCCGGGGCACCTCTCGGCTGGCTaGCATCTGCCGAAGCTCTTCTGTATTCCCATGGATGGAACAGTG | + |
|
Preference number: 5 (lower is better) Translates to: KHGQGGKRPGHLSAG*HLPKLFCIPMDGTV Trigger: CACTGTTCCATCCATGGGAATACAGAAGAGCTTCGGCAGATGGCAGCCAGCCGAGAGGTGCCCCGGCCTCTTTCCACCTTGCCCATGTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000100551.11 ENSMUST00000103162.8 ENSMUST00000139855.8 ENSMUST00000166320.8 |
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| CDS-3UTR CAA 90 bp | GTCAGTTGTAGACATATTCACAGGTCAGCATCTCTGAGTGGTGCAGCTGGAGCTGCGGTGAGGAAGCGGTaGGCAGGTGTGGTGGGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: VSCRHIHRSASLSGAAGAAVRKR*AGVVGS Trigger: GCTGCCCACCACACCTGCCAACCGCTTCCTCACCGC...AGCTCCAGCTGCACCACTCAGAGATGCTGACCTGTGAATATGTCTACAACTGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100551.11 ENSMUST00000103162.8 |
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| CDS-3UTR CAA 90 bp | CAGCCCTCCCTACACCATCTGTCTGCCTTTGTGGAGCCGGAGGTCCAAGTAGGCTCTACCAGAGACACATaGCACCAGTCAACGCGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: QPSLHHLSAFVEPEVQVGSTRDT*HQSTRK Trigger: CTTCCGCGTTGACTGGTGCAATGTGTCTCTGGTAGA...GCCTACTTGGACCTCCGGCTCCACAAAGGCAGACAGATGGTGTAGGGAGGGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100551.11 ENSMUST00000103162.8 |
||
| CDS TCA 90 bp | GATCCCATCGCCTGGAGTAGGTACCTCATCCAGGGGCTCGGGTACTaGCTTGTCTACCAGAGACACATTGCACCAGTCAACGCGGAAGTG | + |
|
Preference number: 5 (lower is better) Translates to: DPIAWSRYLIQGLGY*LVYQRHIAPVNAEV Trigger: CACTTCCGCGTTGACTGGTGCAATGTGTCTCTGGTAGACAAGTCAGTACCCGAGCCCCTGGATGAGGTACCTACTCCAGGCGATGGGATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100551.11 ENSMUST00000103162.8 ENSMUST00000166320.8 |
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| CDS CCA 90 bp | TCGATTGTAGGCTGTGACCTCGATGACTTGGTACCCACGATCTTCTaGAGTGGGGGAGCCGTAGAGGAAGCCAGGGTTATAGGGACTGCG | + |
|
Preference number: 5 (lower is better) Translates to: SIVGCDLDDLVPTIF*SGGAVEEARVIGTA Trigger: CGCAGTCCCTATAACCCTGGCTTCCTCTACGGCTCCCCCACTCCAGAAGATCGTGGGTACCAAGTCATCGAGGTCACAGCCTACAATCGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000100551.11 ENSMUST00000103162.8 ENSMUST00000166320.8 |
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| CDS-3UTR CAA 90 bp | CCAGAATCCTCTCTCCCTTATCCTGACCCTCCAGCCCTGACTGGTTGGCAGTTGTGTGACCTCGATGACTaGGTACCCACGATCTTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: PESSLPYPDPPALTGWQLCDLDD*VPTIFW Trigger: CCAGAAGATCGTGGGTACCAAGTCATCGAGGTCACA...CAACTGCCAACCAGTCAGGGCTGGAGGGTCAGGATAAGGGAGAGAGGATTCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100551.11 ENSMUST00000103162.8 |
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| CDS-3UTR CAA 90 bp | CTGAGTGGTGCAGCTGGAGCTGGAGCTACAAGGTCATGTAGAGGACAGAGTGGGTCTACCAGAGACACATaGCACCAGTCAACGCGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: LSGAAGAGATRSCRGQSGSTRDT*HQSTRK Trigger: CTTCCGCGTTGACTGGTGCAATGTGTCTCTGGTAGA...CCCACTCTGTCCTCTACATGACCTTGTAGCTCCAGCTCCAGCTGCACCACTCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100551.11 ENSMUST00000103162.8 |
||
| CDS-3UTR CAA 90 bp | AGTAGGCTAGGAGCTGGAGTCAGTTGTAGACATATTCACAGGTCAGCATCTCTGGTTGTCTGCTGGGCCTaGGTGTCCCTCAGTCCTGCC | + |
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Preference number: 5 (lower is better) Translates to: SRLGAGVSCRHIHRSASLVVCWA*VSLSPA Trigger: GGCAGGACTGAGGGACACCAAGGCCCAGCAGACAAC...CAGAGATGCTGACCTGTGAATATGTCTACAACTGACTCCAGCTCCTAGCCTACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100551.11 ENSMUST00000103162.8 |
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| CDS-3UTR CAA 90 bp | GGAGGTCCAAGTAGGCTAGGAGCTGGAGTCAGTTGTAGACATATTCACAGGTCACACCAGGAACTCAGCTaGGTATGGCAACCGGGGACC | + |
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Preference number: 5 (lower is better) Translates to: GGPSRLGAGVSCRHIHRSHQELS*VWQPGT Trigger: GGTCCCCGGTTGCCATACCAAGCTGAGTTCCTGGTG...TGACCTGTGAATATGTCTACAACTGACTCCAGCTCCTAGCCTACTTGGACCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100551.11 ENSMUST00000103162.8 |
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| CDS TCA 90 bp | GCCATCTGCCGAAGCTCTTCTGTATTCCCATGGATGGAACAGTGGTaGAACATCTGGATGTCAGAGGTGGCCATGTCTCTCTTCAGCCGT | + |
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Preference number: 5 (lower is better) Translates to: AICRSSSVFPWMEQW*NIWMSEVAMSLFSR Trigger: ACGGCTGAAGAGAGACATGGCCACCTCTGACATCCAGATGTTTCACCACTGTTCCATCCATGGGAATACAGAAGAGCTTCGGCAGATGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000100551.11 ENSMUST00000103162.8 ENSMUST00000139855.8 ENSMUST00000166320.8 |
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| CDS-3UTR CAA 90 bp | GTCAGTTGTAGACATATTCACAGGTCAGCATCTCTGAGTGGTGCAGCTGGAGCTTGTGACCTCGATGACTaGGTACCCACGATCTTCTGG | + |
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Preference number: 5 (lower is better) Translates to: VSCRHIHRSASLSGAAGACDLDD*VPTIFW Trigger: CCAGAAGATCGTGGGTACCAAGTCATCGAGGTCACA...AGCTCCAGCTGCACCACTCAGAGATGCTGACCTGTGAATATGTCTACAACTGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100551.11 ENSMUST00000103162.8 |
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| CDS CCA 72 bp | CTGGAGGTGAGCGTGGTAGGTGAGTCGGACAGTGGGTaGCACCGCAACGTGTTCTGGAAGGCGCAGGAAGGT | + |
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Preference number: 6 (lower is better) Translates to: LEVSVVGESDSG*HRNVFWKAQEG Trigger: ACCTTCCTGCGCCTTCCAGAACACGTTGCGGTGCCACCCACTGTCCGACTCACCTACCACGCTCACCTCCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000100551.11 ENSMUST00000103162.8 ENSMUST00000152042.2 ENSMUST00000166320.8 |
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| CDS CCA 72 bp | TGGGCAAGGTGGAAAGAGGCCGGGGCACCTCTCGGCTaGCTGCCATCTGCCGAAGCTCTTCTGTATTCCCAT | + |
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Preference number: 6 (lower is better) Translates to: WARWKEAGAPLG*LPSAEALLYSH Trigger: ATGGGAATACAGAAGAGCTTCGGCAGATGGCAGCCAGCCGAGAGGTGCCCCGGCCTCTTTCCACCTTGCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000100551.11 ENSMUST00000103162.8 ENSMUST00000139855.8 ENSMUST00000166320.8 |
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| CDS GCA 72 bp | GAAAGAGGCCGGGGCACCTCTCGGCTGGCTGCCATCTaGCGAAGCTCTTCTGTATTCCCATGGATGGAACAG | + |
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Preference number: 6 (lower is better) Translates to: ERGRGTSRLAAI*RSSSVFPWMEQ Trigger: CTGTTCCATCCATGGGAATACAGAAGAGCTTCGGCAGATGGCAGCCAGCCGAGAGGTGCCCCGGCCTCTTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000100551.11 ENSMUST00000103162.8 ENSMUST00000139855.8 ENSMUST00000166320.8 |
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| CDS GCA 72 bp | CAAGGTGGAAAGAGGCCGGGGCACCTCTCGGCTGGCTaGCATCTGCCGAAGCTCTTCTGTATTCCCATGGAT | + |
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Preference number: 6 (lower is better) Translates to: QGGKRPGHLSAG*HLPKLFCIPMD Trigger: ATCCATGGGAATACAGAAGAGCTTCGGCAGATGGCAGCCAGCCGAGAGGTGCCCCGGCCTCTTTCCACCTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000100551.11 ENSMUST00000103162.8 ENSMUST00000139855.8 ENSMUST00000166320.8 |
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| CDS CAA 90 bp | CCATCGCCTGGAGTAGGTACCTCATCCAGGGGCTCGGGTACTGACTaGTCTACCAGAGACACATTGCACCAGTCAACGCGGAAGTGGGGT | + |
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Preference number: 6 (lower is better) Translates to: PSPGVGTSSRGSGTD*STRDTLHQSTRKWG Trigger: ACCCCACTTCCGCGTTGACTGGTGCAATGTGTCTCTGGTAGACAAGTCAGTACCCGAGCCCCTGGATGAGGTACCTACTCCAGGCGATGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000100551.11 ENSMUST00000103162.8 ENSMUST00000166320.8 |
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| CDS GCA 72 bp | TCTGTGGCTTCAGTGGGTGGGCAGAAGAACGGGTCGTaGTCCAAGATCCCATCGCCTGGAGTAGGTACCTCA | + |
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Preference number: 6 (lower is better) Translates to: SVASVGGQKNGS*SKIPSPGVGTS Trigger: TGAGGTACCTACTCCAGGCGATGGGATCTTGGAGCACGACCCGTTCTTCTGCCCACCCACTGAAGCCACAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000100551.11 ENSMUST00000103162.8 ENSMUST00000139855.8 ENSMUST00000166320.8 |
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| CDS CCA 72 bp | AGGCATCTGTCAGGAAGTCTCGGTCTGTGGCTTCAGTaGGTGGGCAGAAGAACGGGTCGTGCTCCAAGATCC | + |
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Preference number: 6 (lower is better) Translates to: RHLSGSLGLWLQ*VGRRTGRAPRS Trigger: GGATCTTGGAGCACGACCCGTTCTTCTGCCCACCCACTGAAGCCACAGACCGAGACTTCCTGACAGATGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000100551.11 ENSMUST00000103162.8 ENSMUST00000139855.8 ENSMUST00000166320.8 |
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| CDS GCA 72 bp | GGGGCTCGGGTACTGACTTGTCTACCAGAGACACATTaGACCAGTCAACGCGGAAGTGGGGTGCCAAAGTGT | + |
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Preference number: 6 (lower is better) Translates to: GARVLTCLPETH*TSQRGSGVPKC Trigger: ACACTTTGGCACCCCACTTCCGCGTTGACTGGTGCAATGTGTCTCTGGTAGACAAGTCAGTACCCGAGCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000100551.11 ENSMUST00000103162.8 ENSMUST00000166320.8 |
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| CDS CCA 72 bp | ATCTGTCAGGAAGTCTCGGTCTGTGGCTTCAGTGGGTaGGCAGAAGAACGGGTCGTGCTCCAAGATCCCATC | + |
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Preference number: 6 (lower is better) Translates to: ICQEVSVCGFSG*AEERVVLQDPI Trigger: GATGGGATCTTGGAGCACGACCCGTTCTTCTGCCCACCCACTGAAGCCACAGACCGAGACTTCCTGACAGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000100551.11 ENSMUST00000103162.8 ENSMUST00000139855.8 ENSMUST00000166320.8 |
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| CDS CAA 72 bp | AGGGGCTCGGGTACTGACTTGTCTACCAGAGACACATaGCACCAGTCAACGCGGAAGTGGGGTGCCAAAGTG | + |
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Preference number: 6 (lower is better) Translates to: RGSGTDLSTRDT*HQSTRKWGAKV Trigger: CACTTTGGCACCCCACTTCCGCGTTGACTGGTGCAATGTGTCTCTGGTAGACAAGTCAGTACCCGAGCCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000100551.11 ENSMUST00000103162.8 ENSMUST00000166320.8 |
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| CDS CAA 72 bp | GGAGTAGGTACCTCATCCAGGGGCTCGGGTACTGACTaGTCTACCAGAGACACATTGCACCAGTCAACGCGG | + |
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Preference number: 6 (lower is better) Translates to: GVGTSSRGSGTD*STRDTLHQSTR Trigger: CCGCGTTGACTGGTGCAATGTGTCTCTGGTAGACAAGTCAGTACCCGAGCCCCTGGATGAGGTACCTACTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100551.11 ENSMUST00000103162.8 ENSMUST00000166320.8 |
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| CDS TCA 72 bp | GCCTGGAGTAGGTACCTCATCCAGGGGCTCGGGTACTaGCTTGTCTACCAGAGACACATTGCACCAGTCAAC | + |
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Preference number: 6 (lower is better) Translates to: AWSRYLIQGLGY*LVYQRHIAPVN Trigger: GTTGACTGGTGCAATGTGTCTCTGGTAGACAAGTCAGTACCCGAGCCCCTGGATGAGGTACCTACTCCAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100551.11 ENSMUST00000103162.8 ENSMUST00000166320.8 |
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| CDS CAA 72 bp | GATGCACAAACACACGACCCACAAGTAGGTGTAAAGTaGTCTGCTGGGCCTTGGTGTCCCTCAGTCCTGCCA | + |
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Preference number: 6 (lower is better) Translates to: DAQTHDPQVGVK*SAGPWCPSVLP Trigger: TGGCAGGACTGAGGGACACCAAGGCCCAGCAGACAACTTTACACCTACTTGTGGGTCGTGTGTTTGTGCATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000100551.11 ENSMUST00000103162.8 ENSMUST00000152042.2 ENSMUST00000166320.8 |
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| CDS CCA 72 bp | CTGCCATCTGCCGAAGCTCTTCTGTATTCCCATGGATaGAACAGTGGTGAAACATCTGGATGTCAGAGGTGG | + |
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Preference number: 6 (lower is better) Translates to: LPSAEALLYSHG*NSGETSGCQRW Trigger: CCACCTCTGACATCCAGATGTTTCACCACTGTTCCATCCATGGGAATACAGAAGAGCTTCGGCAGATGGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000100551.11 ENSMUST00000103162.8 ENSMUST00000139855.8 ENSMUST00000166320.8 |
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| CDS GCA 72 bp | TCTGGAAGGCGCAGGAAGGTGGCATGTTCCAAAGGATaGACAAACACACGACCCACAAGTAGGTGTAAAGTT | + |
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Preference number: 6 (lower is better) Translates to: SGRRRKVACSKG*TNTRPTSRCKV Trigger: AACTTTACACCTACTTGTGGGTCGTGTGTTTGTGCATCCTTTGGAACATGCCACCTTCCTGCGCCTTCCAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000100551.11 ENSMUST00000103162.8 ENSMUST00000152042.2 ENSMUST00000166320.8 |
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