Pregenerated sensors for SFXN3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025212Ensembl transcript IDs: ENSMUST00000062213.13, ENSMUST00000084493.8, ENSMUST00000111954.11, ENSMUST00000237222.2
Found 173 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CATTCTAGGGTGTGGGGTCCAGCAAGCATGAGCCCCCTGCCTCCCTaGTTCCACACTGCTTCCTCTACCAGCCCACGTCCTGAACCAGCT | + |
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Preference number: 1 (lower is better) Translates to: HSRVWGPASMSPLPP*FHTASSTSPRPEPA Trigger: AGCTGGTTCAGGACGTGGGCTGGTAGAGGAAGCAGTGTGGAATCAGGGAGGCAGGGGGCTCATGCTTGCTGGACCCCACACCCTAGAATG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000062213.13 ENSMUST00000084493.8 ENSMUST00000111954.11 |
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| 3UTR CCA 90 bp | CCCACAATGCAGTGTGGAGAGCAGTGCAGGCTACTGACACCCCCATaGTCCACCAGAAGAGAGGAGTGGAGCCATTCTAGGGTGTGGGGT | + |
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Preference number: 1 (lower is better) Translates to: PTMQCGEQCRLLTPP*STRREEWSHSRVWG Trigger: ACCCCACACCCTAGAATGGCTCCACTCCTCTCTTCTGGTGGACCATGGGGGTGTCAGTAGCCTGCACTGCTCTCCACACTGCATTGTGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000062213.13 ENSMUST00000084493.8 ENSMUST00000111954.11 |
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| 3UTR CCA 90 bp | TTGAGGCCTGTGTTTAAGCACCGGTCCCACACCAGCCCCTACAAGTaGGTACGGGTGGTGGCAGTTCCTGAAGGGAATGCTTGCTCTGCC | + |
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Preference number: 1 (lower is better) Translates to: LRPVFKHRSHTSPYK*VRVVAVPEGNACSA Trigger: GGCAGAGCAAGCATTCCCTTCAGGAACTGCCACCACCCGTACCCACTTGTAGGGGCTGGTGTGGGACCGGTGCTTAAACACAGGCCTCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000062213.13 ENSMUST00000084493.8 ENSMUST00000111954.11 |
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| 3UTR CCA 90 bp | TGTTTAAGCACCGGTCCCACACCAGCCCCTACAAGTGGGTACGGGTaGTGGCAGTTCCTGAAGGGAATGCTTGCTCTGCCTGTGTTGTGT | + |
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Preference number: 1 (lower is better) Translates to: CLSTGPTPAPTSGYG*WQFLKGMLALPVLC Trigger: ACACAACACAGGCAGAGCAAGCATTCCCTTCAGGAACTGCCACCACCCGTACCCACTTGTAGGGGCTGGTGTGGGACCGGTGCTTAAACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000062213.13 ENSMUST00000084493.8 ENSMUST00000111954.11 |
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| 3UTR GCA 90 bp | TCAAGATGGTCTCTAAAAGCACCCACAATGCAGTGTGGAGAGCAGTaGAGGCTACTGACACCCCCATGGTCCACCAGAAGAGAGGAGTGG | + |
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Preference number: 1 (lower is better) Translates to: SRWSLKAPTMQCGEQ*RLLTPPWSTRREEW Trigger: CCACTCCTCTCTTCTGGTGGACCATGGGGGTGTCAGTAGCCTGCACTGCTCTCCACACTGCATTGTGGGTGCTTTTAGAGACCATCTTGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000062213.13 ENSMUST00000084493.8 ENSMUST00000111954.11 |
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| 3UTR TCA 90 bp | ATGCCTTTTAATCCCAGCACTCACTGCCATAGGCAAGCAGATCTCTaGGTTTCAGGACAGCCAGGGCTACCCAGAGAAACCATAACTGAA | + |
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Preference number: 1 (lower is better) Translates to: MPFNPSTHCHRQADL*VSGQPGLPRETITE Trigger: TTCAGTTATGGTTTCTCTGGGTAGCCCTGGCTGTCCTGAAACTCAGAGATCTGCTTGCCTATGGCAGTGAGTGCTGGGATTAAAAGGCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000062213.13 ENSMUST00000084493.8 ENSMUST00000111954.11 |
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| 3UTR TCA 90 bp | CTTTCTGATTGGGGGAGGAATTGGAAGTGTGGGATTTCTGAATCATaGCATGACTCATCAGAACAGACGAAGAATGCTCAAGATGGTCTC | + |
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Preference number: 1 (lower is better) Translates to: LSDWGRNWKCGISES*HDSSEQTKNAQDGL Trigger: GAGACCATCTTGAGCATTCTTCGTCTGTTCTGATGAGTCATGTCATGATTCAGAAATCCCACACTTCCAATTCCTCCCCCAATCAGAAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000062213.13 ENSMUST00000084493.8 ENSMUST00000111954.11 |
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| 3UTR GCA 90 bp | ATTTCTGCTCTTAGCTTCCAGGATGAAATGTATAAACACATGTGCTaGATATGTGGCAGTGCACACACACAAACACAGGAGGGATGGGTT | + |
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Preference number: 1 (lower is better) Translates to: ISALSFQDEMYKHMC*ICGSAHTQTQEGWV Trigger: AACCCATCCCTCCTGTGTTTGTGTGTGTGCACTGCCACATATGCAGCACATGTGTTTATACATTTCATCCTGGAAGCTAAGAGCAGAAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000062213.13 ENSMUST00000084493.8 ENSMUST00000111954.11 |
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| 3UTR-3UTR GCA 90 bp | GCCCCTACAAGTGGGTACGGGTGGTGGCAGTTCCTGAAGGGAATGCTTGCTCTGCAGTGTGGAGAGCAGTaGAGGCTACTGACACCCCCA | + |
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Preference number: 2 (lower is better) Translates to: APTSGYGWWQFLKGMLALQCGEQ*RLLTPP Trigger: TGGGGGTGTCAGTAGCCTGCACTGCTCTCCACACTG...CAGAGCAAGCATTCCCTTCAGGAACTGCCACCACCCGTACCCACTTGTAGGGGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000062213.13 ENSMUST00000084493.8 ENSMUST00000111954.11 |
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| 3UTR-3UTR TCA 90 bp | TGGCAGTTCCTGAAGGGAATGCTTGCTCTGCCTGTGTTGTGTGGCTTTCTGATTGGGGTCCAGCAAGCATaGGCCCCCTGCCTCCCTGAT | + |
|
Preference number: 2 (lower is better) Translates to: WQFLKGMLALPVLCGFLIGVQQA*APCLPD Trigger: ATCAGGGAGGCAGGGGGCTCATGCTTGCTGGACCCC...AATCAGAAAGCCACACAACACAGGCAGAGCAAGCATTCCCTTCAGGAACTGCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000062213.13 ENSMUST00000084493.8 ENSMUST00000111954.11 |
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| 3UTR-3UTR TCA 90 bp | GCCCCTACAAGTGGGTACGGGTGGTGGCAGTTCCTGAAGGGAATGCTTGCTCTGAGGTGGGCAGGAGACTaGGAAGAGAAGACAAATAGC | + |
|
Preference number: 2 (lower is better) Translates to: APTSGYGWWQFLKGMLALRWAGD*EEKTNS Trigger: GCTATTTGTCTTCTCTTCTCAGTCTCCTGCCCACCT...CAGAGCAAGCATTCCCTTCAGGAACTGCCACCACCCGTACCCACTTGTAGGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000062213.13 ENSMUST00000084493.8 ENSMUST00000111954.11 |
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| 3UTR-3UTR CCA 90 bp | GCCCCTACAAGTGGGTACGGGTGGTGGCAGTTCCTGAAGGGAATGCTTGCTCTGCTTCAGTCCCTGTTCTaGGATCCTGGGGCTTATCTT | + |
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Preference number: 2 (lower is better) Translates to: APTSGYGWWQFLKGMLALLQSLF*DPGAYL Trigger: AAGATAAGCCCCAGGATCCCAGAACAGGGACTGAAG...CAGAGCAAGCATTCCCTTCAGGAACTGCCACCACCCGTACCCACTTGTAGGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000062213.13 ENSMUST00000084493.8 ENSMUST00000111954.11 |
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| 3UTR-3UTR TCA 90 bp | ATTTGGCGTGGAGATATAATTCTATGCCCTGGAGTCAGTATCACCCACACCATTGGGGTCCAGCAAGCATaGGCCCCCTGCCTCCCTGAT | + |
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Preference number: 2 (lower is better) Translates to: IWRGDIILCPGVSITHTIGVQQA*APCLPD Trigger: ATCAGGGAGGCAGGGGGCTCATGCTTGCTGGACCCC...AATGGTGTGGGTGATACTGACTCCAGGGCATAGAATTATATCTCCACGCCAAAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000062213.13 ENSMUST00000111954.11 |
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| 3UTR-3UTR CCA 90 bp | TGGCAGTTCCTGAAGGGAATGCTTGCTCTGCCTGTGTTGTGTGGCTTTCTGATTGGTTGCTGGTCTCAGTaGCTGCTCCCCACATCAAGC | + |
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Preference number: 2 (lower is better) Translates to: WQFLKGMLALPVLCGFLIGCWSQ*LLPTSS Trigger: GCTTGATGTGGGGAGCAGCCACTGAGACCAGCAACC...AATCAGAAAGCCACACAACACAGGCAGAGCAAGCATTCCCTTCAGGAACTGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000062213.13 ENSMUST00000084493.8 ENSMUST00000111954.11 |
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| 3UTR-3UTR TCA 90 bp | AAGAAAGAGAGAAAGAAAGGAAAAGAGAAAGAGGGCACTGGGGATGTCGCTCAGAGCCCCCTGCCTCCCTaGTTCCACACTGCTTCCTCT | + |
|
Preference number: 2 (lower is better) Translates to: KKERKKGKEKEGTGDVAQSPLPP*FHTASS Trigger: AGAGGAAGCAGTGTGGAATCAGGGAGGCAGGGGGCT...CTGAGCGACATCCCCAGTGCCCTCTTTCTCTTTTCCTTTCTTTCTCTCTTTCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000062213.13 ENSMUST00000084493.8 ENSMUST00000111954.11 |
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| 3UTR-3UTR TCA 90 bp | GCCCCTACAAGTGGGTACGGGTGGTGGCAGTTCCTGAAGGGAATGCTTGCTCTGGGGATTTCTGAATCATaGCATGACTCATCAGAACAG | + |
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Preference number: 2 (lower is better) Translates to: APTSGYGWWQFLKGMLALGISES*HDSSEQ Trigger: CTGTTCTGATGAGTCATGTCATGATTCAGAAATCCC...CAGAGCAAGCATTCCCTTCAGGAACTGCCACCACCCGTACCCACTTGTAGGGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000062213.13 ENSMUST00000084493.8 ENSMUST00000111954.11 |
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| 3UTR-3UTR GCA 90 bp | GCCCCTACAAGTGGGTACGGGTGGTGGCAGTTCCTGAAGGGAATGCTTGCTCTGTATAAACACATGTGCTaGATATGTGGCAGTGCACAC | + |
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Preference number: 2 (lower is better) Translates to: APTSGYGWWQFLKGMLALYKHMC*ICGSAH Trigger: GTGTGCACTGCCACATATGCAGCACATGTGTTTATA...CAGAGCAAGCATTCCCTTCAGGAACTGCCACCACCCGTACCCACTTGTAGGGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000062213.13 ENSMUST00000084493.8 ENSMUST00000111954.11 |
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| 3UTR CAA 90 bp | GGATGTCGCTCAGTGGTAGAGCAGTTGCTTAGCATATATGAAGCCTaGGGTTCTTCCAGAGACGGGGTAGATGGAAAGGAAGGAGCTGAG | + |
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Preference number: 2 (lower is better) Translates to: GCRSVVEQLLSIYEA*GSSRDGVDGKEGAE Trigger: CTCAGCTCCTTCCTTTCCATCTACCCCGTCTCTGGAAGAACCCAAGGCTTCATATATGCTAAGCAACTGCTCTACCACTGAGCGACATCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000062213.13 ENSMUST00000084493.8 ENSMUST00000111954.11 |
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| 3UTR-3UTR TCA 90 bp | TATAATTCTATGCCCTGGAGTCAGTATCACCCACACCATTCCCGAACTCATCTTAGCCCCCTGCCTCCCTaGTTCCACACTGCTTCCTCT | + |
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Preference number: 2 (lower is better) Translates to: YNSMPWSQYHPHHSRTHLSPLPP*FHTASS Trigger: AGAGGAAGCAGTGTGGAATCAGGGAGGCAGGGGGCT...AAGATGAGTTCGGGAATGGTGTGGGTGATACTGACTCCAGGGCATAGAATTATA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000062213.13 ENSMUST00000111954.11 |
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| 3UTR-3UTR CCA 90 bp | AAGAAAGAGAGAAAGAAAGGAAAAGAGAAAGAGGGCACTGGGGATGTCGCTCAGGGTTGCTGGTCTCAGTaGCTGCTCCCCACATCAAGC | + |
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Preference number: 2 (lower is better) Translates to: KKERKKGKEKEGTGDVAQGCWSQ*LLPTSS Trigger: GCTTGATGTGGGGAGCAGCCACTGAGACCAGCAACC...CTGAGCGACATCCCCAGTGCCCTCTTTCTCTTTTCCTTTCTTTCTCTCTTTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000062213.13 ENSMUST00000084493.8 ENSMUST00000111954.11 |
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| 3UTR-3UTR GCA 90 bp | AAGAAAGAGAGAAAGAAAGGAAAAGAGAAAGAGGGCACTGGGGATGTCGCTCAGTCCCTGATTCCACACTaGTTCCTCTACCAGCCCACG | + |
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Preference number: 2 (lower is better) Translates to: KKERKKGKEKEGTGDVAQSLIPH*FLYQPT Trigger: CGTGGGCTGGTAGAGGAAGCAGTGTGGAATCAGGGA...CTGAGCGACATCCCCAGTGCCCTCTTTCTCTTTTCCTTTCTTTCTCTCTTTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000062213.13 ENSMUST00000084493.8 ENSMUST00000111954.11 |
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| 3UTR-3UTR CCA 90 bp | ATTTGGCGTGGAGATATAATTCTATGCCCTGGAGTCAGTATCACCCACACCATTGGTTGCTGGTCTCAGTaGCTGCTCCCCACATCAAGC | + |
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Preference number: 2 (lower is better) Translates to: IWRGDIILCPGVSITHTIGCWSQ*LLPTSS Trigger: GCTTGATGTGGGGAGCAGCCACTGAGACCAGCAACC...AATGGTGTGGGTGATACTGACTCCAGGGCATAGAATTATATCTCCACGCCAAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062213.13 ENSMUST00000111954.11 |
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| 3UTR-3UTR CCA 90 bp | AATTCTATGCCCTGGAGTCAGTATCACCCACACCATTCCCGAACTCATCTTCTACCTGTTCTGGGATCCTaGGGCTTATCTTGGGCACAG | + |
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Preference number: 2 (lower is better) Translates to: NSMPWSQYHPHHSRTHLLPVLGS*GLSWAQ Trigger: CTGTGCCCAAGATAAGCCCCAGGATCCCAGAACAGG...TAGAAGATGAGTTCGGGAATGGTGTGGGTGATACTGACTCCAGGGCATAGAATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062213.13 ENSMUST00000111954.11 |
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| 3UTR-3UTR CCA 90 bp | TGGCAGTTCCTGAAGGGAATGCTTGCTCTGCCTGTGTTGTGTGGCTTTCTGATTCTTCAGTCCCTGTTCTaGGATCCTGGGGCTTATCTT | + |
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Preference number: 2 (lower is better) Translates to: WQFLKGMLALPVLCGFLILQSLF*DPGAYL Trigger: AAGATAAGCCCCAGGATCCCAGAACAGGGACTGAAG...AATCAGAAAGCCACACAACACAGGCAGAGCAAGCATTCCCTTCAGGAACTGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000062213.13 ENSMUST00000084493.8 ENSMUST00000111954.11 |
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| 3UTR-3UTR CCA 90 bp | AAGAAAGAGAGAAAGAAAGGAAAAGAGAAAGAGGGCACTGGGGATGTCGCTCAGCTACTGACACCCCCATaGTCCACCAGAAGAGAGGAG | + |
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Preference number: 2 (lower is better) Translates to: KKERKKGKEKEGTGDVAQLLTPP*STRREE Trigger: CTCCTCTCTTCTGGTGGACCATGGGGGTGTCAGTAG...CTGAGCGACATCCCCAGTGCCCTCTTTCTCTTTTCCTTTCTTTCTCTCTTTCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000062213.13 ENSMUST00000084493.8 ENSMUST00000111954.11 |
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| 3UTR-3UTR CCA 90 bp | GATTTGGCGTGGAGATATAATTCTATGCCCTGGAGTCAGTATCACCCACACCATAGTGGGTACGGGTGGTaGCAGTTCCTGAAGGGAATG | + |
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Preference number: 2 (lower is better) Translates to: DLAWRYNSMPWSQYHPHHSGYGW*QFLKGM Trigger: CATTCCCTTCAGGAACTGCCACCACCCGTACCCACT...ATGGTGTGGGTGATACTGACTCCAGGGCATAGAATTATATCTCCACGCCAAATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062213.13 ENSMUST00000111954.11 |
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| 3UTR CAA 90 bp | GAAGAGTCAATGAAACACAGAATTACCTGTCTTGATACTGTACGCTaGAGGCCTGTGTTTAAGCACCGGTCCCACACCAGCCCCTACAAG | + |
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Preference number: 2 (lower is better) Translates to: EESMKHRITCLDTVR*RPVFKHRSHTSPYK Trigger: CTTGTAGGGGCTGGTGTGGGACCGGTGCTTAAACACAGGCCTCAAGCGTACAGTATCAAGACAGGTAATTCTGTGTTTCATTGACTCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000062213.13 ENSMUST00000084493.8 ENSMUST00000111954.11 |
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| 3UTR-3UTR TCA 90 bp | ATTTGGCGTGGAGATATAATTCTATGCCCTGGAGTCAGTATCACCCACACCATTAGGCAAGCAGATCTCTaGGTTTCAGGACAGCCAGGG | + |
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Preference number: 2 (lower is better) Translates to: IWRGDIILCPGVSITHTIRQADL*VSGQPG Trigger: CCCTGGCTGTCCTGAAACTCAGAGATCTGCTTGCCT...AATGGTGTGGGTGATACTGACTCCAGGGCATAGAATTATATCTCCACGCCAAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062213.13 ENSMUST00000111954.11 |
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| 3UTR-3UTR GCA 90 bp | CTATGCCCTGGAGTCAGTATCACCCACACCATTCCCGAACTCATCTTCTATTTGGGCAATGGTGGCACATaGCTTTTAATCCCAGCACTC | + |
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Preference number: 2 (lower is better) Translates to: LCPGVSITHTIPELIFYLGNGGT*LLIPAL Trigger: GAGTGCTGGGATTAAAAGGCATGTGCCACCATTGCC...CAAATAGAAGATGAGTTCGGGAATGGTGTGGGTGATACTGACTCCAGGGCATAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062213.13 ENSMUST00000111954.11 |
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| 3UTR-3UTR CCA 90 bp | CTATGCCCTGGAGTCAGTATCACCCACACCATTCCCGAACTCATCTTCTATTTGTCCTGGGGCTTATCTTaGGCACAGAAGGCTAAGATG | + |
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Preference number: 2 (lower is better) Translates to: LCPGVSITHTIPELIFYLSWGLS*AQKAKM Trigger: CATCTTAGCCTTCTGTGCCCAAGATAAGCCCCAGGA...CAAATAGAAGATGAGTTCGGGAATGGTGTGGGTGATACTGACTCCAGGGCATAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062213.13 ENSMUST00000111954.11 |
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| 3UTR-3UTR CCA 90 bp | TATAATTCTATGCCCTGGAGTCAGTATCACCCACACCATTCCCGAACTCATCTTCCTGTTCTGGGATCCTaGGGCTTATCTTGGGCACAG | + |
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Preference number: 2 (lower is better) Translates to: YNSMPWSQYHPHHSRTHLPVLGS*GLSWAQ Trigger: CTGTGCCCAAGATAAGCCCCAGGATCCCAGAACAGG...AAGATGAGTTCGGGAATGGTGTGGGTGATACTGACTCCAGGGCATAGAATTATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062213.13 ENSMUST00000111954.11 |
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| 3UTR-3UTR CCA 90 bp | CTATGCCCTGGAGTCAGTATCACCCACACCATTCCCGAACTCATCTTCTATTTGGCATATATGAAGCCTTaGGTTCTTCCAGAGACGGGG | + |
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Preference number: 2 (lower is better) Translates to: LCPGVSITHTIPELIFYLAYMKP*VLPETG Trigger: CCCCGTCTCTGGAAGAACCCAAGGCTTCATATATGC...CAAATAGAAGATGAGTTCGGGAATGGTGTGGGTGATACTGACTCCAGGGCATAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062213.13 ENSMUST00000111954.11 |
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| 3UTR-3UTR TCA 90 bp | AATTCTATGCCCTGGAGTCAGTATCACCCACACCATTCCCGAACTCATCTTCTAAGGTGGGCAGGAGACTaGGAAGAGAAGACAAATAGC | + |
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Preference number: 2 (lower is better) Translates to: NSMPWSQYHPHHSRTHLLRWAGD*EEKTNS Trigger: GCTATTTGTCTTCTCTTCTCAGTCTCCTGCCCACCT...TAGAAGATGAGTTCGGGAATGGTGTGGGTGATACTGACTCCAGGGCATAGAATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062213.13 ENSMUST00000111954.11 |
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| 3UTR-3UTR GCA 90 bp | AAGAAAGAGAGAAAGAAAGGAAAAGAGAAAGAGGGCACTGGGGATGTCGCTCAGAGGGAATGCTTGCTCTaGCTGTGTTGTGTGGCTTTC | + |
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Preference number: 2 (lower is better) Translates to: KKERKKGKEKEGTGDVAQRECLL*LCCVAF Trigger: GAAAGCCACACAACACAGGCAGAGCAAGCATTCCCT...CTGAGCGACATCCCCAGTGCCCTCTTTCTCTTTTCCTTTCTTTCTCTCTTTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000062213.13 ENSMUST00000084493.8 ENSMUST00000111954.11 |
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| 3UTR-3UTR GCA 90 bp | AATTCTATGCCCTGGAGTCAGTATCACCCACACCATTCCCGAACTCATCTTCTAGGCAATGGTGGCACATaGCTTTTAATCCCAGCACTC | + |
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Preference number: 2 (lower is better) Translates to: NSMPWSQYHPHHSRTHLLGNGGT*LLIPAL Trigger: GAGTGCTGGGATTAAAAGGCATGTGCCACCATTGCC...TAGAAGATGAGTTCGGGAATGGTGTGGGTGATACTGACTCCAGGGCATAGAATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062213.13 ENSMUST00000111954.11 |
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| 3UTR-3UTR CCA 90 bp | CCAGCCCACGTCCTGAACCAGCTTTTAGAGCTGGTTCAAATAGCTGTATTTGAATCCTGGGGCTTATCTTaGGCACAGAAGGCTAAGATG | + |
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Preference number: 2 (lower is better) Translates to: PAHVLNQLLELVQIAVFESWGLS*AQKAKM Trigger: CATCTTAGCCTTCTGTGCCCAAGATAAGCCCCAGGA...TTCAAATACAGCTATTTGAACCAGCTCTAAAAGCTGGTTCAGGACGTGGGCTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000062213.13 ENSMUST00000084493.8 ENSMUST00000111954.11 |
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| 3UTR-3UTR CCA 90 bp | AATTCTATGCCCTGGAGTCAGTATCACCCACACCATTCCCGAACTCATCTTCTACTTCAGTCCCTGTTCTaGGATCCTGGGGCTTATCTT | + |
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Preference number: 2 (lower is better) Translates to: NSMPWSQYHPHHSRTHLLLQSLF*DPGAYL Trigger: AAGATAAGCCCCAGGATCCCAGAACAGGGACTGAAG...TAGAAGATGAGTTCGGGAATGGTGTGGGTGATACTGACTCCAGGGCATAGAATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062213.13 ENSMUST00000111954.11 |
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| 3UTR-3UTR CCA 90 bp | CTATGCCCTGGAGTCAGTATCACCCACACCATTCCCGAACTCATCTTCTATTTGGTGTGGCTTTCTGATTaGGGGAGGAATTGGAAGTGT | + |
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Preference number: 2 (lower is better) Translates to: LCPGVSITHTIPELIFYLVWLSD*GRNWKC Trigger: ACACTTCCAATTCCTCCCCCAATCAGAAAGCCACAC...CAAATAGAAGATGAGTTCGGGAATGGTGTGGGTGATACTGACTCCAGGGCATAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062213.13 ENSMUST00000111954.11 |
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| 3UTR-3UTR TCA 90 bp | TATAATTCTATGCCCTGGAGTCAGTATCACCCACACCATTCCCGAACTCATCTTAGGTGGGCAGGAGACTaGGAAGAGAAGACAAATAGC | + |
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Preference number: 2 (lower is better) Translates to: YNSMPWSQYHPHHSRTHLRWAGD*EEKTNS Trigger: GCTATTTGTCTTCTCTTCTCAGTCTCCTGCCCACCT...AAGATGAGTTCGGGAATGGTGTGGGTGATACTGACTCCAGGGCATAGAATTATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062213.13 ENSMUST00000111954.11 |
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| 3UTR-3UTR GCA 90 bp | TGGCAGTTCCTGAAGGGAATGCTTGCTCTGCCTGTGTTGTGTGGCTTTCTGATTATGGGTTTTGTGACTTaGTCTTTGAAACCAGAGAGG | + |
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Preference number: 2 (lower is better) Translates to: WQFLKGMLALPVLCGFLIMGFVT*SLKPER Trigger: CCTCTCTGGTTTCAAAGAGCAAGTCACAAAACCCAT...AATCAGAAAGCCACACAACACAGGCAGAGCAAGCATTCCCTTCAGGAACTGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000062213.13 ENSMUST00000084493.8 ENSMUST00000111954.11 |
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| 3UTR-3UTR GCA 90 bp | CCAGCCCACGTCCTGAACCAGCTTTTAGAGCTGGTTCAAATAGCTGTATTTGAACTGCATATGTGGCAGTaGACACACACAAACACAGGA | + |
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Preference number: 2 (lower is better) Translates to: PAHVLNQLLELVQIAVFELHMWQ*THTNTG Trigger: TCCTGTGTTTGTGTGTGTGCACTGCCACATATGCAG...TTCAAATACAGCTATTTGAACCAGCTCTAAAAGCTGGTTCAGGACGTGGGCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000062213.13 ENSMUST00000084493.8 ENSMUST00000111954.11 |
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| 3UTR-3UTR GCA 90 bp | TGGCAGTTCCTGAAGGGAATGCTTGCTCTGCCTGTGTTGTGTGGCTTTCTGATTTATAAACACATGTGCTaGATATGTGGCAGTGCACAC | + |
|
Preference number: 2 (lower is better) Translates to: WQFLKGMLALPVLCGFLIYKHMC*ICGSAH Trigger: GTGTGCACTGCCACATATGCAGCACATGTGTTTATA...AATCAGAAAGCCACACAACACAGGCAGAGCAAGCATTCCCTTCAGGAACTGCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000062213.13 ENSMUST00000084493.8 ENSMUST00000111954.11 |
||
| 3UTR-3UTR CCA 90 bp | TGGCAGTTCCTGAAGGGAATGCTTGCTCTGCCTGTGTTGTGTGGCTTTCTGATTGAAGAATGCTCAAGATaGTCTCTAAAAGCACCCACA | + |
|
Preference number: 2 (lower is better) Translates to: WQFLKGMLALPVLCGFLIEECSR*SLKAPT Trigger: TGTGGGTGCTTTTAGAGACCATCTTGAGCATTCTTC...AATCAGAAAGCCACACAACACAGGCAGAGCAAGCATTCCCTTCAGGAACTGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000062213.13 ENSMUST00000084493.8 ENSMUST00000111954.11 |
||
| 3UTR-3UTR CCA 90 bp | CTATGCCCTGGAGTCAGTATCACCCACACCATTCCCGAACTCATCTTCTATTTGGATTGGGGGAGGAATTaGAAGTGTGGGATTTCTGAA | + |
|
Preference number: 2 (lower is better) Translates to: LCPGVSITHTIPELIFYLDWGRN*KCGISE Trigger: TTCAGAAATCCCACACTTCCAATTCCTCCCCCAATC...CAAATAGAAGATGAGTTCGGGAATGGTGTGGGTGATACTGACTCCAGGGCATAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000062213.13 ENSMUST00000111954.11 |
||
| 3UTR CAA 90 bp | ATCTTCTATTTGGTCCAGCTATTAGAGCCTGGGTCCCTCTTCCTTTaGAAATTAAGGGCAGAGGGAGTGCAGTGCCATGTCTTAAGAAAG | + |
|
Preference number: 2 (lower is better) Translates to: IFYLVQLLEPGSLFL*KLRAEGVQCHVLRK Trigger: CTTTCTTAAGACATGGCACTGCACTCCCTCTGCCCTTAATTTCAAAAGGAAGAGGGACCCAGGCTCTAATAGCTGGACCAAATAGAAGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062213.13 ENSMUST00000111954.11 |
||
| 3UTR-3UTR CCA 90 bp | AATTCTATGCCCTGGAGTCAGTATCACCCACACCATTCCCGAACTCATCTTCTAGATTGGGGGAGGAATTaGAAGTGTGGGATTTCTGAA | + |
|
Preference number: 2 (lower is better) Translates to: NSMPWSQYHPHHSRTHLLDWGRN*KCGISE Trigger: TTCAGAAATCCCACACTTCCAATTCCTCCCCCAATC...TAGAAGATGAGTTCGGGAATGGTGTGGGTGATACTGACTCCAGGGCATAGAATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000062213.13 ENSMUST00000111954.11 |
||
| 3UTR-3UTR TCA 90 bp | AATTCTATGCCCTGGAGTCAGTATCACCCACACCATTCCCGAACTCATCTTCTAGGGATTTCTGAATCATaGCATGACTCATCAGAACAG | + |
|
Preference number: 2 (lower is better) Translates to: NSMPWSQYHPHHSRTHLLGISES*HDSSEQ Trigger: CTGTTCTGATGAGTCATGTCATGATTCAGAAATCCC...TAGAAGATGAGTTCGGGAATGGTGTGGGTGATACTGACTCCAGGGCATAGAATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062213.13 ENSMUST00000111954.11 |
||
| 3UTR-3UTR GCA 90 bp | AAGAAAGAGAGAAAGAAAGGAAAAGAGAAAGAGGGCACTGGGGATGTCGCTCAGATGGGTTTTGTGACTTaGTCTTTGAAACCAGAGAGG | + |
|
Preference number: 2 (lower is better) Translates to: KKERKKGKEKEGTGDVAQMGFVT*SLKPER Trigger: CCTCTCTGGTTTCAAAGAGCAAGTCACAAAACCCAT...CTGAGCGACATCCCCAGTGCCCTCTTTCTCTTTTCCTTTCTTTCTCTCTTTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000062213.13 ENSMUST00000084493.8 ENSMUST00000111954.11 |
||
| 3UTR-3UTR CCA 90 bp | GATTTGGCGTGGAGATATAATTCTATGCCCTGGAGTCAGTATCACCCACACCATGAAGAATGCTCAAGATaGTCTCTAAAAGCACCCACA | + |
|
Preference number: 2 (lower is better) Translates to: DLAWRYNSMPWSQYHPHHEECSR*SLKAPT Trigger: TGTGGGTGCTTTTAGAGACCATCTTGAGCATTCTTC...ATGGTGTGGGTGATACTGACTCCAGGGCATAGAATTATATCTCCACGCCAAATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062213.13 ENSMUST00000111954.11 |
||
| 3UTR-3UTR TCA 90 bp | GATTTGGCGTGGAGATATAATTCTATGCCCTGGAGTCAGTATCACCCACACCATTCTAAGAAGAGTCAATaGAACACAGAATTACCTGTC | + |
|
Preference number: 2 (lower is better) Translates to: DLAWRYNSMPWSQYHPHHSKKSQ*NTELPV Trigger: GACAGGTAATTCTGTGTTTCATTGACTCTTCTTAGA...ATGGTGTGGGTGATACTGACTCCAGGGCATAGAATTATATCTCCACGCCAAATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062213.13 ENSMUST00000111954.11 |
||
| 3UTR-3UTR TCA 90 bp | AATTCTATGCCCTGGAGTCAGTATCACCCACACCATTCCCGAACTCATCTTCTATCTAAGAAGAGTCAATaGAACACAGAATTACCTGTC | + |
|
Preference number: 2 (lower is better) Translates to: NSMPWSQYHPHHSRTHLLSKKSQ*NTELPV Trigger: GACAGGTAATTCTGTGTTTCATTGACTCTTCTTAGA...TAGAAGATGAGTTCGGGAATGGTGTGGGTGATACTGACTCCAGGGCATAGAATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062213.13 ENSMUST00000111954.11 |
||
| 3UTR TCA 72 bp | GTGTGGGGTCCAGCAAGCATGAGCCCCCTGCCTCCCTaGTTCCACACTGCTTCCTCTACCAGCCCACGTCCT | + |
|
Preference number: 3 (lower is better) Translates to: VWGPASMSPLPP*FHTASSTSPRP Trigger: AGGACGTGGGCTGGTAGAGGAAGCAGTGTGGAATCAGGGAGGCAGGGGGCTCATGCTTGCTGGACCCCACAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000062213.13 ENSMUST00000084493.8 ENSMUST00000111954.11 |
||
| 3UTR-3UTR CAA 90 bp | GCCCCTACAAGTGGGTACGGGTGGTGGCAGTTCCTGAAGGGAATGCTTGCTCTGCCACATCAAGCCCCCTaGCCCAGTACCCAGAAGATA | + |
|
Preference number: 3 (lower is better) Translates to: APTSGYGWWQFLKGMLALPHQAP*PSTQKI Trigger: TATCTTCTGGGTACTGGGCAAGGGGGCTTGATGTGG...CAGAGCAAGCATTCCCTTCAGGAACTGCCACCACCCGTACCCACTTGTAGGGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000062213.13 ENSMUST00000084493.8 ENSMUST00000111954.11 |
||
| 3UTR TCA 72 bp | CACCCACAATGCAGTGTGGAGAGCAGTGCAGGCTACTaGCACCCCCATGGTCCACCAGAAGAGAGGAGTGGA | + |
|
Preference number: 3 (lower is better) Translates to: HPQCSVESSAGY*HPHGPPEERSG Trigger: TCCACTCCTCTCTTCTGGTGGACCATGGGGGTGTCAGTAGCCTGCACTGCTCTCCACACTGCATTGTGGGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000062213.13 ENSMUST00000084493.8 ENSMUST00000111954.11 |
||
| 3UTR CCA 72 bp | CTACTGACACCCCCATGGTCCACCAGAAGAGAGGAGTaGAGCCATTCTAGGGTGTGGGGTCCAGCAAGCATG | + |
|
Preference number: 3 (lower is better) Translates to: LLTPPWSTRREE*SHSRVWGPASM Trigger: CATGCTTGCTGGACCCCACACCCTAGAATGGCTCCACTCCTCTCTTCTGGTGGACCATGGGGGTGTCAGTAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000062213.13 ENSMUST00000084493.8 ENSMUST00000111954.11 |
||
| 3UTR GCA 72 bp | TGGGTACGGGTGGTGGCAGTTCCTGAAGGGAATGCTTaGTCTGCCTGTGTTGTGTGGCTTTCTGATTGGGGG | + |
|
Preference number: 3 (lower is better) Translates to: WVRVVAVPEGNA*SACVVWLSDWG Trigger: CCCCCAATCAGAAAGCCACACAACACAGGCAGAGCAAGCATTCCCTTCAGGAACTGCCACCACCCGTACCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000062213.13 ENSMUST00000084493.8 ENSMUST00000111954.11 |
||
| 3UTR-3UTR CAA 90 bp | GCCCCTACAAGTGGGTACGGGTGGTGGCAGTTCCTGAAGGGAATGCTTGCTCTGTTTGTGACTTGCTCTTaGAAACCAGAGAGGAGCGGA | + |
|
Preference number: 3 (lower is better) Translates to: APTSGYGWWQFLKGMLALFVTCS*KPERSG Trigger: TCCGCTCCTCTCTGGTTTCAAAGAGCAAGTCACAAA...CAGAGCAAGCATTCCCTTCAGGAACTGCCACCACCCGTACCCACTTGTAGGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000062213.13 ENSMUST00000084493.8 ENSMUST00000111954.11 |
||
| 3UTR TCA 72 bp | AATCCCAGCACTCACTGCCATAGGCAAGCAGATCTCTaGGTTTCAGGACAGCCAGGGCTACCCAGAGAAACC | + |
|
Preference number: 3 (lower is better) Translates to: NPSTHCHRQADL*VSGQPGLPRET Trigger: GGTTTCTCTGGGTAGCCCTGGCTGTCCTGAAACTCAGAGATCTGCTTGCCTATGGCAGTGAGTGCTGGGATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000062213.13 ENSMUST00000084493.8 ENSMUST00000111954.11 |
||
| 3UTR GCA 72 bp | TCTCTAAAAGCACCCACAATGCAGTGTGGAGAGCAGTaGAGGCTACTGACACCCCCATGGTCCACCAGAAGA | + |
|
Preference number: 3 (lower is better) Translates to: SLKAPTMQCGEQ*RLLTPPWSTRR Trigger: TCTTCTGGTGGACCATGGGGGTGTCAGTAGCCTGCACTGCTCTCCACACTGCATTGTGGGTGCTTTTAGAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000062213.13 ENSMUST00000084493.8 ENSMUST00000111954.11 |
||
| 3UTR CCA 72 bp | GTTCCTGAAGGGAATGCTTGCTCTGCCTGTGTTGTGTaGCTTTCTGATTGGGGGAGGAATTGGAAGTGTGGG | + |
|
Preference number: 3 (lower is better) Translates to: VPEGNACSACVV*LSDWGRNWKCG Trigger: CCCACACTTCCAATTCCTCCCCCAATCAGAAAGCCACACAACACAGGCAGAGCAAGCATTCCCTTCAGGAAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000062213.13 ENSMUST00000084493.8 ENSMUST00000111954.11 |
||
| 3UTR-3UTR CAA 90 bp | AAGAAAGAGAGAAAGAAAGGAAAAGAGAAAGAGGGCACTGGGGATGTCGCTCAGCCACATCAAGCCCCCTaGCCCAGTACCCAGAAGATA | + |
|
Preference number: 3 (lower is better) Translates to: KKERKKGKEKEGTGDVAQPHQAP*PSTQKI Trigger: TATCTTCTGGGTACTGGGCAAGGGGGCTTGATGTGG...CTGAGCGACATCCCCAGTGCCCTCTTTCTCTTTTCCTTTCTTTCTCTCTTTCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000062213.13 ENSMUST00000084493.8 ENSMUST00000111954.11 |
||
| 3UTR-3UTR CAA 90 bp | ATTTGGCGTGGAGATATAATTCTATGCCCTGGAGTCAGTATCACCCACACCATTCCACATCAAGCCCCCTaGCCCAGTACCCAGAAGATA | + |
|
Preference number: 3 (lower is better) Translates to: IWRGDIILCPGVSITHTIPHQAP*PSTQKI Trigger: TATCTTCTGGGTACTGGGCAAGGGGGCTTGATGTGG...AATGGTGTGGGTGATACTGACTCCAGGGCATAGAATTATATCTCCACGCCAAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000062213.13 ENSMUST00000111954.11 |
||
| 3UTR-3UTR CAA 90 bp | AAGAAAGAGAGAAAGAAAGGAAAAGAGAAAGAGGGCACTGGGGATGTCGCTCAGCTTGCTCTGCCTGTGTaGTGTGGCTTTCTGATTGGG | + |
|
Preference number: 3 (lower is better) Translates to: KKERKKGKEKEGTGDVAQLALPV*CGFLIG Trigger: CCCAATCAGAAAGCCACACAACACAGGCAGAGCAAG...CTGAGCGACATCCCCAGTGCCCTCTTTCTCTTTTCCTTTCTTTCTCTCTTTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000062213.13 ENSMUST00000084493.8 ENSMUST00000111954.11 |
||
| 3UTR-3UTR CAA 90 bp | AAGAAAGAGAGAAAGAAAGGAAAAGAGAAAGAGGGCACTGGGGATGTCGCTCAGAAACAGGTGGTAGCATaGCAAGGTGGCATCAGAGAA | + |
|
Preference number: 3 (lower is better) Translates to: KKERKKGKEKEGTGDVAQKQVVA*QGGIRE Trigger: TTCTCTGATGCCACCTTGCAATGCTACCACCTGTTT...CTGAGCGACATCCCCAGTGCCCTCTTTCTCTTTTCCTTTCTTTCTCTCTTTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000062213.13 ENSMUST00000084493.8 ENSMUST00000111954.11 |
||
| 3UTR-3UTR CAA 90 bp | CTATGCCCTGGAGTCAGTATCACCCACACCATTCCCGAACTCATCTTCTATTTGTCAGTGGTAGAGCAGTaGCTTAGCATATATGAAGCC | + |
|
Preference number: 3 (lower is better) Translates to: LCPGVSITHTIPELIFYLSVVEQ*LSIYEA Trigger: GGCTTCATATATGCTAAGCAACTGCTCTACCACTGA...CAAATAGAAGATGAGTTCGGGAATGGTGTGGGTGATACTGACTCCAGGGCATAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062213.13 ENSMUST00000111954.11 |
||
| 3UTR CCA 72 bp | AATGCTTGCTCTGCCTGTGTTGTGTGGCTTTCTGATTaGGGGAGGAATTGGAAGTGTGGGATTTCTGAATCA | + |
|
Preference number: 3 (lower is better) Translates to: NACSACVVWLSD*GRNWKCGISES Trigger: TGATTCAGAAATCCCACACTTCCAATTCCTCCCCCAATCAGAAAGCCACACAACACAGGCAGAGCAAGCATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000062213.13 ENSMUST00000084493.8 ENSMUST00000111954.11 |
||
| 3UTR CCA 72 bp | GTCATGGATTTGGCGTGGAGATATAATTCTATGCCCTaGAGTCAGTATCACCCACACCATTCCCGAACTCAT | + |
|
Preference number: 3 (lower is better) Translates to: VMDLAWRYNSMP*SQYHPHHSRTH Trigger: ATGAGTTCGGGAATGGTGTGGGTGATACTGACTCCAGGGCATAGAATTATATCTCCACGCCAAATCCATGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062213.13 ENSMUST00000111954.11 |
||
| 3UTR-3UTR CAA 90 bp | ATTTGGCGTGGAGATATAATTCTATGCCCTGGAGTCAGTATCACCCACACCATTAAACAGGTGGTAGCATaGCAAGGTGGCATCAGAGAA | + |
|
Preference number: 3 (lower is better) Translates to: IWRGDIILCPGVSITHTIKQVVA*QGGIRE Trigger: TTCTCTGATGCCACCTTGCAATGCTACCACCTGTTT...AATGGTGTGGGTGATACTGACTCCAGGGCATAGAATTATATCTCCACGCCAAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062213.13 ENSMUST00000111954.11 |
||
| 3UTR TCA 72 bp | TGGGGGAGGAATTGGAAGTGTGGGATTTCTGAATCATaGCATGACTCATCAGAACAGACGAAGAATGCTCAA | + |
|
Preference number: 3 (lower is better) Translates to: WGRNWKCGISES*HDSSEQTKNAQ Trigger: TTGAGCATTCTTCGTCTGTTCTGATGAGTCATGTCATGATTCAGAAATCCCACACTTCCAATTCCTCCCCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000062213.13 ENSMUST00000084493.8 ENSMUST00000111954.11 |
||
| 3UTR TCA 72 bp | CTTTTAGAGCTGGTTCAAATAGCTGTATTTGAAACCTaGAGGGTTAAGCTCTGGGTGGCCTACGATGTTCTT | + |
|
Preference number: 3 (lower is better) Translates to: LLELVQIAVFET*RVKLWVAYDVL Trigger: AAGAACATCGTAGGCCACCCAGAGCTTAACCCTTCAGGTTTCAAATACAGCTATTTGAACCAGCTCTAAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000062213.13 ENSMUST00000084493.8 ENSMUST00000111954.11 |
||
| CDS-3UTR GCA 90 bp | AGTCTAAGGTTGCTGGTCTCAGTGGCTGCTCCCCACATCAAGCCCCCTTGCCCACCTACCAGTCCCACCTaGAGGGGCGCCCCCAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SLRLLVSVAAPHIKPPCPPTSPT*RGAPSQ Trigger: CTGGCTGGGGGCGCCCCTGCAGGTGGGACTGGTAGG...TGGGCAAGGGGGCTTGATGTGGGGAGCAGCCACTGAGACCAGCAACCTTAGACT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000062213.13 ENSMUST00000111954.11 |
||
| CDS-3UTR GCA 90 bp | GCCCCTACAAGTGGGTACGGGTGGTGGCAGTTCCTGAAGGGAATGCTTGCTCTGGGCAGCGGCCACAGCTaGAAAGGGCACGAATCGACC | + |
|
Preference number: 4 (lower is better) Translates to: APTSGYGWWQFLKGMLALGSGHS*KGHEST Trigger: GGTCGATTCGTGCCCTTTGCAGCTGTGGCCGCTGCC...CAGAGCAAGCATTCCCTTCAGGAACTGCCACCACCCGTACCCACTTGTAGGGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000062213.13 ENSMUST00000084493.8 ENSMUST00000111954.11 |
||
| 3UTR CAA 72 bp | GGAGAGGCTTATAGGAGTGCCTCCCCCAGTCTAAGGTaGCTGGTCTCAGTGGCTGCTCCCCACATCAAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: GEAYRSASPSLR*LVSVAAPHIKP Trigger: GGGCTTGATGTGGGGAGCAGCCACTGAGACCAGCAACCTTAGACTGGGGGAGGCACTCCTATAAGCCTCTCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000062213.13 ENSMUST00000084493.8 ENSMUST00000111954.11 |
||
| CDS-3UTR TCA 90 bp | AGTCTAAGGTTGCTGGTCTCAGTGGCTGCTCCCCACATCAAGCCCCCTTGCCCACATGGGCACCTGGGCTaGCATACGGCCAATCAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: SLRLLVSVAAPHIKPPCPHGHLG*HTANQD Trigger: GTCTTGATTGGCCGTATGTCAGCCCAGGTGCCCATG...TGGGCAAGGGGGCTTGATGTGGGGAGCAGCCACTGAGACCAGCAACCTTAGACT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000062213.13 ENSMUST00000084493.8 ENSMUST00000111954.11 |
||
| CDS-3UTR TCA 90 bp | GCCCCTACAAGTGGGTACGGGTGGTGGCAGTTCCTGAAGGGAATGCTTGCTCTGTCATCAGGGGGATGTTaGTGCAGTTGGCAGCGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: APTSGYGWWQFLKGMLALSSGGC*CSWQRP Trigger: TGGCCGCTGCCAACTGCATCAACATCCCCCTGATGA...CAGAGCAAGCATTCCCTTCAGGAACTGCCACCACCCGTACCCACTTGTAGGGGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000062213.13 ENSMUST00000084493.8 ENSMUST00000111954.11 |
||
| CDS-3UTR GCA 90 bp | GCCCCTACAAGTGGGTACGGGTGGTGGCAGTTCCTGAAGGGAATGCTTGCTCTGGCTGTCCCCAACTGCTaGACAGTGATGGGAGCATCG | + |
|
Preference number: 4 (lower is better) Translates to: APTSGYGWWQFLKGMLALAVPNC*TVMGAS Trigger: CGATGCTCCCATCACTGTGCAGCAGTTGGGGACAGC...CAGAGCAAGCATTCCCTTCAGGAACTGCCACCACCCGTACCCACTTGTAGGGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062213.13 ENSMUST00000084493.8 |
||
| CDS-3UTR GCA 90 bp | AGTCTAAGGTTGCTGGTCTCAGTGGCTGCTCCCCACATCAAGCCCCCTTGCCCAACCTGCAGCTCCCTCTaGCTCATCAGGGGGATGTTG | + |
|
Preference number: 4 (lower is better) Translates to: SLRLLVSVAAPHIKPPCPTCSSL*LIRGML Trigger: CAACATCCCCCTGATGAGGCAGAGGGAGCTGCAGGT...TGGGCAAGGGGGCTTGATGTGGGGAGCAGCCACTGAGACCAGCAACCTTAGACT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000062213.13 ENSMUST00000084493.8 ENSMUST00000111954.11 |
||
| CDS-3UTR GCA 90 bp | AGTCTAAGGTTGCTGGTCTCAGTGGCTGCTCCCCACATCAAGCCCCCTTGCCCACATCAGTCACTGGGATaGCCACCTGCAGCTCCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SLRLLVSVAAPHIKPPCPHQSLG*PPAAPS Trigger: AGAGGGAGCTGCAGGTGGGCATCCCAGTGACTGATG...TGGGCAAGGGGGCTTGATGTGGGGAGCAGCCACTGAGACCAGCAACCTTAGACT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000062213.13 ENSMUST00000084493.8 ENSMUST00000111954.11 |
||
| CDS-3UTR GCA 90 bp | GCCCCTACAAGTGGGTACGGGTGGTGGCAGTTCCTGAAGGGAATGCTTGCTCTGCATCAGTCACTGGGATaGCCACCTGCAGCTCCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: APTSGYGWWQFLKGMLALHQSLG*PPAAPS Trigger: AGAGGGAGCTGCAGGTGGGCATCCCAGTGACTGATG...CAGAGCAAGCATTCCCTTCAGGAACTGCCACCACCCGTACCCACTTGTAGGGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000062213.13 ENSMUST00000084493.8 ENSMUST00000111954.11 |
||
| CDS-3UTR CCA 90 bp | GCCCCTACAAGTGGGTACGGGTGGTGGCAGTTCCTGAAGGGAATGCTTGCTCTGAGCCTCATCAGTCACTaGGATGCCCACCTGCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: APTSGYGWWQFLKGMLALSLISH*DAHLQL Trigger: GAGCTGCAGGTGGGCATCCCAGTGACTGATGAGGCT...CAGAGCAAGCATTCCCTTCAGGAACTGCCACCACCCGTACCCACTTGTAGGGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000062213.13 ENSMUST00000084493.8 ENSMUST00000111954.11 |
||
| CDS-3UTR CCA 90 bp | AGTCTAAGGTTGCTGGTCTCAGTGGCTGCTCCCCACATCAAGCCCCCTTGCCCAAGCCTCATCAGTCACTaGGATGCCCACCTGCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: SLRLLVSVAAPHIKPPCPSLISH*DAHLQL Trigger: GAGCTGCAGGTGGGCATCCCAGTGACTGATGAGGCT...TGGGCAAGGGGGCTTGATGTGGGGAGCAGCCACTGAGACCAGCAACCTTAGACT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000062213.13 ENSMUST00000084493.8 ENSMUST00000111954.11 |
||
| CDS-3UTR GCA 90 bp | GCTTCCTCTACCAGCCCACGTCCTGAACCAGCTTTTAGAGCTGGTTCAAATAGCGGCAGCGGCCACAGCTaGAAAGGGCACGAATCGACC | + |
|
Preference number: 4 (lower is better) Translates to: ASSTSPRPEPAFRAGSNSGSGHS*KGHEST Trigger: GGTCGATTCGTGCCCTTTGCAGCTGTGGCCGCTGCC...GCTATTTGAACCAGCTCTAAAAGCTGGTTCAGGACGTGGGCTGGTAGAGGAAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000062213.13 ENSMUST00000084493.8 ENSMUST00000111954.11 |
||
| CDS-3UTR GCA 90 bp | GATTTGGCGTGGAGATATAATTCTATGCCCTGGAGTCAGTATCACCCACACCATCCTACCAGTCCCACCTaGAGGGGCGCCCCCAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: DLAWRYNSMPWSQYHPHHPTSPT*RGAPSQ Trigger: CTGGCTGGGGGCGCCCCTGCAGGTGGGACTGGTAGG...ATGGTGTGGGTGATACTGACTCCAGGGCATAGAATTATATCTCCACGCCAAATC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000062213.13 ENSMUST00000111954.11 |
||
| CDS-3UTR CCA 90 bp | AGTCTAAGGTTGCTGGTCTCAGTGGCTGCTCCCCACATCAAGCCCCCTTGCCCACCTAGAAATGTGCTTTaGTCCCACCGAGGTTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SLRLLVSVAAPHIKPPCPPRNVL*SHRGSW Trigger: CCAGGAACCTCGGTGGGACCAAAGCACATTTCTAGG...TGGGCAAGGGGGCTTGATGTGGGGAGCAGCCACTGAGACCAGCAACCTTAGACT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000062213.13 ENSMUST00000084493.8 ENSMUST00000111954.11 |
||
| CDS-3UTR GCA 90 bp | GCCCCTACAAGTGGGTACGGGTGGTGGCAGTTCCTGAAGGGAATGCTTGCTCTGCTCTGCCTAGAAATGTaGTTTGGTCCCACCGAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: APTSGYGWWQFLKGMLALLCLEM*FGPTEV Trigger: AACCTCGGTGGGACCAAAGCACATTTCTAGGCAGAG...CAGAGCAAGCATTCCCTTCAGGAACTGCCACCACCCGTACCCACTTGTAGGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000062213.13 ENSMUST00000084493.8 ENSMUST00000111954.11 |
||
| CDS-3UTR CCA 90 bp | AGTCTAAGGTTGCTGGTCTCAGTGGCTGCTCCCCACATCAAGCCCCCTTGCCCAGCCTGGTCACATGTATaGAGCTTCTCTGAGGGAACA | + |
|
Preference number: 4 (lower is better) Translates to: SLRLLVSVAAPHIKPPCPAWSHV*SFSEGT Trigger: TGTTCCCTCAGAGAAGCTCCATACATGTGACCAGGC...TGGGCAAGGGGGCTTGATGTGGGGAGCAGCCACTGAGACCAGCAACCTTAGACT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000062213.13 ENSMUST00000084493.8 ENSMUST00000111954.11 |
||
| CDS-3UTR TCA 90 bp | GCTTCCTCTACCAGCCCACGTCCTGAACCAGCTTTTAGAGCTGGTTCAAATAGCGAGTGGCCAAGCCTCTaGCCAGCCTCATCAGTCACT | + |
|
Preference number: 4 (lower is better) Translates to: ASSTSPRPEPAFRAGSNSEWPSL*PASSVT Trigger: AGTGACTGATGAGGCTGGTCAGAGGCTTGGCCACTC...GCTATTTGAACCAGCTCTAAAAGCTGGTTCAGGACGTGGGCTGGTAGAGGAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000062213.13 ENSMUST00000084493.8 ENSMUST00000111954.11 |
||
| CDS-3UTR CCA 90 bp | AGTCTAAGGTTGCTGGTCTCAGTGGCTGCTCCCCACATCAAGCCCCCTTGCCCATCCCACCGAGGTTCCTaGATGTTGATATTTAAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: SLRLLVSVAAPHIKPPCPSHRGS*MLIFKG Trigger: GCCCTTAAATATCAACATCCAGGAACCTCGGTGGGA...TGGGCAAGGGGGCTTGATGTGGGGAGCAGCCACTGAGACCAGCAACCTTAGACT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000062213.13 ENSMUST00000084493.8 ENSMUST00000111954.11 |
||
| CDS-3UTR TCA 90 bp | TGGCAGTTCCTGAAGGGAATGCTTGCTCTGCCTGTGTTGTGTGGCTTTCTGATTTCATCAGGGGGATGTTaGTGCAGTTGGCAGCGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: WQFLKGMLALPVLCGFLISSGGC*CSWQRP Trigger: TGGCCGCTGCCAACTGCATCAACATCCCCCTGATGA...AATCAGAAAGCCACACAACACAGGCAGAGCAAGCATTCCCTTCAGGAACTGCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000062213.13 ENSMUST00000084493.8 ENSMUST00000111954.11 |
||
| CDS-3UTR CCA 90 bp | TGGCAGTTCCTGAAGGGAATGCTTGCTCTGCCTGTGTTGTGTGGCTTTCTGATTAGCCTCATCAGTCACTaGGATGCCCACCTGCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: WQFLKGMLALPVLCGFLISLISH*DAHLQL Trigger: GAGCTGCAGGTGGGCATCCCAGTGACTGATGAGGCT...AATCAGAAAGCCACACAACACAGGCAGAGCAAGCATTCCCTTCAGGAACTGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000062213.13 ENSMUST00000084493.8 ENSMUST00000111954.11 |
||
| CDS-3UTR CCA 90 bp | GCTTCCTCTACCAGCCCACGTCCTGAACCAGCTTTTAGAGCTGGTTCAAATAGCATGTTCATGGGCACCTaGGCTGACATACGGCCAATC | + |
|
Preference number: 4 (lower is better) Translates to: ASSTSPRPEPAFRAGSNSMFMGT*ADIRPI Trigger: GATTGGCCGTATGTCAGCCCAGGTGCCCATGAACAT...GCTATTTGAACCAGCTCTAAAAGCTGGTTCAGGACGTGGGCTGGTAGAGGAAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000062213.13 ENSMUST00000084493.8 ENSMUST00000111954.11 |
||
| CDS-3UTR CCA 90 bp | TGGCAGTTCCTGAAGGGAATGCTTGCTCTGCCTGTGTTGTGTGGCTTTCTGATTGGAAGATTCCCTGTTTaGCAGCAGTCACCGAGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: WQFLKGMLALPVLCGFLIGRFPV*QQSPSG Trigger: GCCACTCGGTGACTGCTGCCAAACAGGGAATCTTCC...AATCAGAAAGCCACACAACACAGGCAGAGCAAGCATTCCCTTCAGGAACTGCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000062213.13 ENSMUST00000084493.8 ENSMUST00000111954.11 |
||
| CDS-3UTR CCA 90 bp | TGGCAGTTCCTGAAGGGAATGCTTGCTCTGCCTGTGTTGTGTGGCTTTCTGATTCGCAGCACAGGGGTGTaGCAAATACCAAGCAGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: WQFLKGMLALPVLCGFLIRSTGV*QIPSRS Trigger: GCTTCTGCTTGGTATTTGCCACACCCCTGTGCTGCG...AATCAGAAAGCCACACAACACAGGCAGAGCAAGCATTCCCTTCAGGAACTGCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000062213.13 ENSMUST00000084493.8 ENSMUST00000111954.11 |
||
| CDS-3UTR TCA 90 bp | CCAGCCCACGTCCTGAACCAGCTTTTAGAGCTGGTTCAAATAGCTGTATTTGAACATGGGCACCTGGGCTaGCATACGGCCAATCAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: PAHVLNQLLELVQIAVFEHGHLG*HTANQD Trigger: GTCTTGATTGGCCGTATGTCAGCCCAGGTGCCCATG...TTCAAATACAGCTATTTGAACCAGCTCTAAAAGCTGGTTCAGGACGTGGGCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000062213.13 ENSMUST00000084493.8 ENSMUST00000111954.11 |
||
| CDS-3UTR TCA 90 bp | AATTCTATGCCCTGGAGTCAGTATCACCCACACCATTCCCGAACTCATCTTCTATCATCAGGGGGATGTTaGTGCAGTTGGCAGCGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: NSMPWSQYHPHHSRTHLLSSGGC*CSWQRP Trigger: TGGCCGCTGCCAACTGCATCAACATCCCCCTGATGA...TAGAAGATGAGTTCGGGAATGGTGTGGGTGATACTGACTCCAGGGCATAGAATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000062213.13 ENSMUST00000111954.11 |
||
| CDS-3UTR TCA 90 bp | AAGAAAGAGAGAAAGAAAGGAAAAGAGAAAGAGGGCACTGGGGATGTCGCTCAGGAGTGGCCAAGCCTCTaGCCAGCCTCATCAGTCACT | + |
|
Preference number: 4 (lower is better) Translates to: KKERKKGKEKEGTGDVAQEWPSL*PASSVT Trigger: AGTGACTGATGAGGCTGGTCAGAGGCTTGGCCACTC...CTGAGCGACATCCCCAGTGCCCTCTTTCTCTTTTCCTTTCTTTCTCTCTTTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000062213.13 ENSMUST00000084493.8 ENSMUST00000111954.11 |
||
| CDS-3UTR GCA 90 bp | CCAGCCCACGTCCTGAACCAGCTTTTAGAGCTGGTTCAAATAGCTGTATTTGAAACCTGCAGCTCCCTCTaGCTCATCAGGGGGATGTTG | + |
|
Preference number: 4 (lower is better) Translates to: PAHVLNQLLELVQIAVFETCSSL*LIRGML Trigger: CAACATCCCCCTGATGAGGCAGAGGGAGCTGCAGGT...TTCAAATACAGCTATTTGAACCAGCTCTAAAAGCTGGTTCAGGACGTGGGCTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000062213.13 ENSMUST00000084493.8 ENSMUST00000111954.11 |
||
| CDS-3UTR GCA 90 bp | AATTCTATGCCCTGGAGTCAGTATCACCCACACCATTCCCGAACTCATCTTCTACATCAGTCACTGGGATaGCCACCTGCAGCTCCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: NSMPWSQYHPHHSRTHLLHQSLG*PPAAPS Trigger: AGAGGGAGCTGCAGGTGGGCATCCCAGTGACTGATG...TAGAAGATGAGTTCGGGAATGGTGTGGGTGATACTGACTCCAGGGCATAGAATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062213.13 ENSMUST00000111954.11 |
||
| CDS-3UTR CCA 90 bp | TGGCAGTTCCTGAAGGGAATGCTTGCTCTGCCTGTGTTGTGTGGCTTTCTGATTATGTTCATGGGCACCTaGGCTGACATACGGCCAATC | + |
|
Preference number: 4 (lower is better) Translates to: WQFLKGMLALPVLCGFLIMFMGT*ADIRPI Trigger: GATTGGCCGTATGTCAGCCCAGGTGCCCATGAACAT...AATCAGAAAGCCACACAACACAGGCAGAGCAAGCATTCCCTTCAGGAACTGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000062213.13 ENSMUST00000084493.8 ENSMUST00000111954.11 |
||
| 3UTR CAA 72 bp | TGGCAGTTCCTGAAGGGAATGCTTGCTCTGCCTGTGTaGTGTGGCTTTCTGATTGGGGGAGGAATTGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: WQFLKGMLALPV*CGFLIGGGIGS Trigger: ACTTCCAATTCCTCCCCCAATCAGAAAGCCACACAACACAGGCAGAGCAAGCATTCCCTTCAGGAACTGCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000062213.13 ENSMUST00000084493.8 ENSMUST00000111954.11 |
||
| 3UTR CAA 72 bp | AGAGGGCACTGGGGATGTCGCTCAGTGGTAGAGCAGTaGCTTAGCATATATGAAGCCTTGGGTTCTTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: RGHWGCRSVVEQ*LSIYEALGSSR Trigger: TCTGGAAGAACCCAAGGCTTCATATATGCTAAGCAACTGCTCTACCACTGAGCGACATCCCCAGTGCCCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000062213.13 ENSMUST00000084493.8 ENSMUST00000111954.11 |
||
| 3UTR CAA 72 bp | TTGGTCCAGCTATTAGAGCCTGGGTCCCTCTTCCTTTaGAAATTAAGGGCAGAGGGAGTGCAGTGCCATGTC | + |
|
Preference number: 4 (lower is better) Translates to: LVQLLEPGSLFL*KLRAEGVQCHV Trigger: GACATGGCACTGCACTCCCTCTGCCCTTAATTTCAAAAGGAAGAGGGACCCAGGCTCTAATAGCTGGACCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062213.13 ENSMUST00000111954.11 |
||
| CDS-3UTR GCA 90 bp | ATTTGGCGTGGAGATATAATTCTATGCCCTGGAGTCAGTATCACCCACACCATTGCTGTCCCCAACTGCTaGACAGTGATGGGAGCATCG | + |
|
Preference number: 4 (lower is better) Translates to: IWRGDIILCPGVSITHTIAVPNC*TVMGAS Trigger: CGATGCTCCCATCACTGTGCAGCAGTTGGGGACAGC...AATGGTGTGGGTGATACTGACTCCAGGGCATAGAATTATATCTCCACGCCAAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062213.13 |
||
| CDS-3UTR GCA 90 bp | TATAATTCTATGCCCTGGAGTCAGTATCACCCACACCATTCCCGAACTCATCTTACCTGCAGCTCCCTCTaGCTCATCAGGGGGATGTTG | + |
|
Preference number: 4 (lower is better) Translates to: YNSMPWSQYHPHHSRTHLTCSSL*LIRGML Trigger: CAACATCCCCCTGATGAGGCAGAGGGAGCTGCAGGT...AAGATGAGTTCGGGAATGGTGTGGGTGATACTGACTCCAGGGCATAGAATTATA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000062213.13 ENSMUST00000111954.11 |
||
| CDS-3UTR CCA 90 bp | CCAGCCCACGTCCTGAACCAGCTTTTAGAGCTGGTTCAAATAGCTGTATTTGAATCCCCCGTGTCCGGATaGAATGCTGAGTCATACACG | + |
|
Preference number: 4 (lower is better) Translates to: PAHVLNQLLELVQIAVFESPVSG*NAESYT Trigger: CGTGTATGACTCAGCATTCCATCCGGACACGGGGGA...TTCAAATACAGCTATTTGAACCAGCTCTAAAAGCTGGTTCAGGACGTGGGCTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000062213.13 ENSMUST00000084493.8 ENSMUST00000111954.11 |
||
| CDS-3UTR CCA 90 bp | AAGAAAGAGAGAAAGAAAGGAAAAGAGAAAGAGGGCACTGGGGATGTCGCTCAGGGAAGATTCCCTGTTTaGCAGCAGTCACCGAGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: KKERKKGKEKEGTGDVAQGRFPV*QQSPSG Trigger: GCCACTCGGTGACTGCTGCCAAACAGGGAATCTTCC...CTGAGCGACATCCCCAGTGCCCTCTTTCTCTTTTCCTTTCTTTCTCTCTTTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000062213.13 ENSMUST00000084493.8 ENSMUST00000111954.11 |
||
| CDS-3UTR CCA 90 bp | GATTTGGCGTGGAGATATAATTCTATGCCCTGGAGTCAGTATCACCCACACCATGGAAGATTCCCTGTTTaGCAGCAGTCACCGAGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: DLAWRYNSMPWSQYHPHHGRFPV*QQSPSG Trigger: GCCACTCGGTGACTGCTGCCAAACAGGGAATCTTCC...ATGGTGTGGGTGATACTGACTCCAGGGCATAGAATTATATCTCCACGCCAAATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062213.13 ENSMUST00000111954.11 |
||
| CDS-3UTR CCA 90 bp | CCAGCCCACGTCCTGAACCAGCTTTTAGAGCTGGTTCAAATAGCTGTATTTGAACGCAGCACAGGGGTGTaGCAAATACCAAGCAGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: PAHVLNQLLELVQIAVFERSTGV*QIPSRS Trigger: GCTTCTGCTTGGTATTTGCCACACCCCTGTGCTGCG...TTCAAATACAGCTATTTGAACCAGCTCTAAAAGCTGGTTCAGGACGTGGGCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000062213.13 ENSMUST00000084493.8 ENSMUST00000111954.11 |
||
| CDS-3UTR CCA 90 bp | TGGCAGTTCCTGAAGGGAATGCTTGCTCTGCCTGTGTTGTGTGGCTTTCTGATTGCCTGGTCACATGTATaGAGCTTCTCTGAGGGAACA | + |
|
Preference number: 4 (lower is better) Translates to: WQFLKGMLALPVLCGFLIAWSHV*SFSEGT Trigger: TGTTCCCTCAGAGAAGCTCCATACATGTGACCAGGC...AATCAGAAAGCCACACAACACAGGCAGAGCAAGCATTCCCTTCAGGAACTGCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000062213.13 ENSMUST00000084493.8 ENSMUST00000111954.11 |
||
| CDS-3UTR GCA 90 bp | CTATGCCCTGGAGTCAGTATCACCCACACCATTCCCGAACTCATCTTCTATTTGCTCTGCCTAGAAATGTaGTTTGGTCCCACCGAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: LCPGVSITHTIPELIFYLLCLEM*FGPTEV Trigger: AACCTCGGTGGGACCAAAGCACATTTCTAGGCAGAG...CAAATAGAAGATGAGTTCGGGAATGGTGTGGGTGATACTGACTCCAGGGCATAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062213.13 ENSMUST00000111954.11 |
||
| CDS-3UTR CCA 90 bp | TGGCAGTTCCTGAAGGGAATGCTTGCTCTGCCTGTGTTGTGTGGCTTTCTGATTTCCCACCGAGGTTCCTaGATGTTGATATTTAAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: WQFLKGMLALPVLCGFLISHRGS*MLIFKG Trigger: GCCCTTAAATATCAACATCCAGGAACCTCGGTGGGA...AATCAGAAAGCCACACAACACAGGCAGAGCAAGCATTCCCTTCAGGAACTGCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000062213.13 ENSMUST00000084493.8 ENSMUST00000111954.11 |
||
| CDS-3UTR CCA 90 bp | ATTTGGCGTGGAGATATAATTCTATGCCCTGGAGTCAGTATCACCCACACCATTTCCCCCGTGTCCGGATaGAATGCTGAGTCATACACG | + |
|
Preference number: 4 (lower is better) Translates to: IWRGDIILCPGVSITHTISPVSG*NAESYT Trigger: CGTGTATGACTCAGCATTCCATCCGGACACGGGGGA...AATGGTGTGGGTGATACTGACTCCAGGGCATAGAATTATATCTCCACGCCAAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000062213.13 ENSMUST00000111954.11 |
||
| CDS-3UTR CCA 90 bp | TATAATTCTATGCCCTGGAGTCAGTATCACCCACACCATTCCCGAACTCATCTTCGCAGCACAGGGGTGTaGCAAATACCAAGCAGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: YNSMPWSQYHPHHSRTHLRSTGV*QIPSRS Trigger: GCTTCTGCTTGGTATTTGCCACACCCCTGTGCTGCG...AAGATGAGTTCGGGAATGGTGTGGGTGATACTGACTCCAGGGCATAGAATTATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062213.13 ENSMUST00000111954.11 |
||
| CDS-3UTR CCA 90 bp | CCAGCCCACGTCCTGAACCAGCTTTTAGAGCTGGTTCAAATAGCTGTATTTGAACCTACCAGTCCCACCTaGAAGATTCCCTGTTTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: PAHVLNQLLELVQIAVFEPTSPT*KIPCLA Trigger: TGCCAAACAGGGAATCTTCCAGGTGGGACTGGTAGG...TTCAAATACAGCTATTTGAACCAGCTCTAAAAGCTGGTTCAGGACGTGGGCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084493.8 |
||
| 3UTR CAA 72 bp | AGTATCACCCACACCATTCCCGAACTCATCTTCTATTaGGTCCAGCTATTAGAGCCTGGGTCCCTCTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: SITHTIPELIFY*VQLLEPGSLFL Trigger: AAGGAAGAGGGACCCAGGCTCTAATAGCTGGACCAAATAGAAGATGAGTTCGGGAATGGTGTGGGTGATACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062213.13 ENSMUST00000111954.11 |
||
| CDS-3UTR TCA 90 bp | CCAGCCCACGTCCTGAACCAGCTTTTAGAGCTGGTTCAAATAGCTGTATTTGAAGTCCGGATGGAATGCTaGGTCATACACGTATTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: PAHVLNQLLELVQIAVFEVRMEC*VIHVFG Trigger: GCCAAATACGTGTATGACTCAGCATTCCATCCGGAC...TTCAAATACAGCTATTTGAACCAGCTCTAAAAGCTGGTTCAGGACGTGGGCTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000062213.13 ENSMUST00000084493.8 ENSMUST00000111954.11 |
||
| CDS-3UTR TCA 90 bp | AAGAAAGAGAGAAAGAAAGGAAAAGAGAAAGAGGGCACTGGGGATGTCGCTCAGGTCCGGATGGAATGCTaGGTCATACACGTATTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: KKERKKGKEKEGTGDVAQVRMEC*VIHVFG Trigger: GCCAAATACGTGTATGACTCAGCATTCCATCCGGAC...CTGAGCGACATCCCCAGTGCCCTCTTTCTCTTTTCCTTTCTTTCTCTCTTTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000062213.13 ENSMUST00000084493.8 ENSMUST00000111954.11 |
||
| CDS-3UTR GCA 90 bp | AATTCTATGCCCTGGAGTCAGTATCACCCACACCATTCCCGAACTCATCTTCTACTCTGCCTAGAAATGTaGTTTGGTCCCACCGAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: NSMPWSQYHPHHSRTHLLLCLEM*FGPTEV Trigger: AACCTCGGTGGGACCAAAGCACATTTCTAGGCAGAG...TAGAAGATGAGTTCGGGAATGGTGTGGGTGATACTGACTCCAGGGCATAGAATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062213.13 ENSMUST00000111954.11 |
||
| CDS-3UTR CCA 90 bp | TATAATTCTATGCCCTGGAGTCAGTATCACCCACACCATTCCCGAACTCATCTTCCTAGAAATGTGCTTTaGTCCCACCGAGGTTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: YNSMPWSQYHPHHSRTHLPRNVL*SHRGSW Trigger: CCAGGAACCTCGGTGGGACCAAAGCACATTTCTAGG...AAGATGAGTTCGGGAATGGTGTGGGTGATACTGACTCCAGGGCATAGAATTATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062213.13 ENSMUST00000111954.11 |
||
| CDS-3UTR CCA 90 bp | TGGCAGTTCCTGAAGGGAATGCTTGCTCTGCCTGTGTTGTGTGGCTTTCTGATTCTTGATATCACCACCTaGAAGATTCCCTGTTTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: WQFLKGMLALPVLCGFLILDITT*KIPCLA Trigger: TGCCAAACAGGGAATCTTCCAGGTGGTGATATCAAG...AATCAGAAAGCCACACAACACAGGCAGAGCAAGCATTCCCTTCAGGAACTGCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062213.13 ENSMUST00000111954.11 |
||
| CDS-3UTR TCA 90 bp | TATAATTCTATGCCCTGGAGTCAGTATCACCCACACCATTCCCGAACTCATCTTGTCCGGATGGAATGCTaGGTCATACACGTATTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: YNSMPWSQYHPHHSRTHLVRMEC*VIHVFG Trigger: GCCAAATACGTGTATGACTCAGCATTCCATCCGGAC...AAGATGAGTTCGGGAATGGTGTGGGTGATACTGACTCCAGGGCATAGAATTATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062213.13 ENSMUST00000111954.11 |
||
| CDS-3UTR TCA 90 bp | CCAGCCCACGTCCTGAACCAGCTTTTAGAGCTGGTTCAAATAGCTGTATTTGAACGCCATTCCGATTCTTaGTATCACCACCTGGAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: PAHVLNQLLELVQIAVFERHSDS*YHHLED Trigger: ATCTTCCAGGTGGTGATATCAAGAATCGGAATGGCG...TTCAAATACAGCTATTTGAACCAGCTCTAAAAGCTGGTTCAGGACGTGGGCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062213.13 ENSMUST00000111954.11 |
||
| CDS-3UTR TCA 90 bp | GATTTGGCGTGGAGATATAATTCTATGCCCTGGAGTCAGTATCACCCACACCATCGCCATTCCGATTCTTaGTATCACCACCTGGAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: DLAWRYNSMPWSQYHPHHRHSDS*YHHLED Trigger: ATCTTCCAGGTGGTGATATCAAGAATCGGAATGGCG...ATGGTGTGGGTGATACTGACTCCAGGGCATAGAATTATATCTCCACGCCAAATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062213.13 ENSMUST00000111954.11 |
||
| 3UTR CAA 72 bp | TCAGTGGTAGAGCAGTTGCTTAGCATATATGAAGCCTaGGGTTCTTCCAGAGACGGGGTAGATGGAAAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: SVVEQLLSIYEA*GSSRDGVDGKE Trigger: TTCCTTTCCATCTACCCCGTCTCTGGAAGAACCCAAGGCTTCATATATGCTAAGCAACTGCTCTACCACTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000062213.13 ENSMUST00000084493.8 ENSMUST00000111954.11 |
||
| CDS-3UTR CCA 90 bp | TATAATTCTATGCCCTGGAGTCAGTATCACCCACACCATTCCCGAACTCATCTTTCCCACCGAGGTTCCTaGATGTTGATATTTAAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: YNSMPWSQYHPHHSRTHLSHRGS*MLIFKG Trigger: GCCCTTAAATATCAACATCCAGGAACCTCGGTGGGA...AAGATGAGTTCGGGAATGGTGTGGGTGATACTGACTCCAGGGCATAGAATTATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062213.13 ENSMUST00000111954.11 |
||
| CDS-3UTR CCA 90 bp | GATTTGGCGTGGAGATATAATTCTATGCCCTGGAGTCAGTATCACCCACACCATCTTGATATCACCACCTaGAAGATTCCCTGTTTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: DLAWRYNSMPWSQYHPHHLDITT*KIPCLA Trigger: TGCCAAACAGGGAATCTTCCAGGTGGTGATATCAAG...ATGGTGTGGGTGATACTGACTCCAGGGCATAGAATTATATCTCCACGCCAAATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062213.13 ENSMUST00000111954.11 |
||
| CDS CCA 90 bp | AGCAGTCACCGAGTGGCCAAGCCTCTGACCAGCCTCATCAGTCACTaGGATGCCCACCTGCAGCTCCCTCTGCCTCATCAGGGGGATGTT | + |
|
Preference number: 5 (lower is better) Translates to: SSHRVAKPLTSLISH*DAHLQLPLPHQGDV Trigger: AACATCCCCCTGATGAGGCAGAGGGAGCTGCAGGTGGGCATCCCAGTGACTGATGAGGCTGGTCAGAGGCTTGGCCACTCGGTGACTGCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000062213.13 ENSMUST00000084493.8 ENSMUST00000111954.11 |
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| CDS-3UTR CAA 90 bp | AGTCTAAGGTTGCTGGTCTCAGTGGCTGCTCCCCACATCAAGCCCCCTTGCCCAAGCGGGGGCAGGTGCTaGGTGAGAGACTTGAGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: SLRLLVSVAAPHIKPPCPSGGRC*VRDLSP Trigger: GGGACTCAAGTCTCTCACCAAGCACCTGCCCCCGCT...TGGGCAAGGGGGCTTGATGTGGGGAGCAGCCACTGAGACCAGCAACCTTAGACT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000062213.13 ENSMUST00000084493.8 ENSMUST00000111954.11 |
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| CDS TCA 90 bp | TGGAAGATTCCCTGTTTGGCAGCAGTCACCGAGTGGCCAAGCCTCTaGCCAGCCTCATCAGTCACTGGGATGCCCACCTGCAGCTCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: WKIPCLAAVTEWPSL*PASSVTGMPTCSSL Trigger: GAGGGAGCTGCAGGTGGGCATCCCAGTGACTGATGAGGCTGGTCAGAGGCTTGGCCACTCGGTGACTGCTGCCAAACAGGGAATCTTCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000062213.13 ENSMUST00000084493.8 ENSMUST00000111954.11 |
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| CDS-3UTR CAA 90 bp | AGTCTAAGGTTGCTGGTCTCAGTGGCTGCTCCCCACATCAAGCCCCCTTGCCCACTCATCAGGGGGATGTaGATGCAGTTGGCAGCGGCC | + |
|
Preference number: 5 (lower is better) Translates to: SLRLLVSVAAPHIKPPCPLIRGM*MQLAAA Trigger: GGCCGCTGCCAACTGCATCAACATCCCCCTGATGAG...TGGGCAAGGGGGCTTGATGTGGGGAGCAGCCACTGAGACCAGCAACCTTAGACT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000062213.13 ENSMUST00000084493.8 ENSMUST00000111954.11 |
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| CDS TCA 90 bp | GCCAGGGACGGCGCTTCAGGAAGTCTTTCTTCTCCAGAGTGTTCATaGTCACCGGGGGAATGGCCATGGCGGGAATCGCCATTCCGATTC | + |
|
Preference number: 5 (lower is better) Translates to: ARDGASGSLSSPECS*SPGEWPWRESPFRF Trigger: GAATCGGAATGGCGATTCCCGCCATGGCCATTCCCCCGGTGATCATGAACACTCTGGAGAAGAAAGACTTCCTGAAGCGCCGTCCCTGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000062213.13 ENSMUST00000111954.11 |
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| CDS CCA 90 bp | CACAGGGGTGTGGCAAATACCAAGCAGAAGCCTACCAGTCCCACCTaGAAGATTCCCTGTTTGGCAGCAGTCACCGAGTGGCCAAGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: HRGVANTKQKPTSPT*KIPCLAAVTEWPSL Trigger: GAGGCTTGGCCACTCGGTGACTGCTGCCAAACAGGGAATCTTCCAGGTGGGACTGGTAGGCTTCTGCTTGGTATTTGCCACACCCCTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084493.8 |
||
| CDS-3UTR CAA 90 bp | AGTCTAAGGTTGCTGGTCTCAGTGGCTGCTCCCCACATCAAGCCCCCTTGCCCATGCTTGGTGAGAGACTaGAGTCCCAGAGCAGTAGCC | + |
|
Preference number: 5 (lower is better) Translates to: SLRLLVSVAAPHIKPPCPCLVRD*SPRAVA Trigger: GGCTACTGCTCTGGGACTCAAGTCTCTCACCAAGCA...TGGGCAAGGGGGCTTGATGTGGGGAGCAGCCACTGAGACCAGCAACCTTAGACT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000062213.13 ENSMUST00000084493.8 ENSMUST00000111954.11 |
||
| CDS-3UTR CAA 90 bp | AGTCTAAGGTTGCTGGTCTCAGTGGCTGCTCCCCACATCAAGCCCCCTTGCCCATGGAAGATTCCCTGTTaGGCAGCAGTCACCGAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: SLRLLVSVAAPHIKPPCPWKIPC*AAVTEW Trigger: CCACTCGGTGACTGCTGCCAAACAGGGAATCTTCCA...TGGGCAAGGGGGCTTGATGTGGGGAGCAGCCACTGAGACCAGCAACCTTAGACT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000062213.13 ENSMUST00000084493.8 ENSMUST00000111954.11 |
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| CDS GCA 90 bp | TCCCCGGACAGCAGCAGATTTCGGGGATCAGTGACTGTGAAGAAATaGCGGGCTCTGCCTAGAAATGTGCTTTGGTCCCACCGAGGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: SPDSSRFRGSVTVKK*RALPRNVLWSHRGS Trigger: GGAACCTCGGTGGGACCAAAGCACATTTCTAGGCAGAGCCCGGCATTTCTTCACAGTCACTGATCCCCGAAATCTGCTGCTGTCCGGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000062213.13 ENSMUST00000084493.8 ENSMUST00000111954.11 ENSMUST00000237222.2 |
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| CDS CCA 90 bp | ATACCAAGCAGAAGCCTACCAGTCCCACCTGGAAGATTCCCTGTTTaGCAGCAGTCACCGAGTGGCCAAGCCTCTGACCAGCCTCATCAG | + |
|
Preference number: 5 (lower is better) Translates to: IPSRSLPVPPGRFPV*QQSPSGQASDQPHQ Trigger: CTGATGAGGCTGGTCAGAGGCTTGGCCACTCGGTGACTGCTGCCAAACAGGGAATCTTCCAGGTGGGACTGGTAGGCTTCTGCTTGGTAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084493.8 |
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| CDS-3UTR CAA 90 bp | AGTCTAAGGTTGCTGGTCTCAGTGGCTGCTCCCCACATCAAGCCCCCTTGCCCAGAGTCATACACGTATTaGGCTCGCCATAGCTGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: SLRLLVSVAAPHIKPPCPESYTY*ARHSWS Trigger: GGACCAGCTATGGCGAGCCAAATACGTGTATGACTC...TGGGCAAGGGGGCTTGATGTGGGGAGCAGCCACTGAGACCAGCAACCTTAGACT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000062213.13 ENSMUST00000084493.8 ENSMUST00000111954.11 |
||
| CDS-3UTR CAA 90 bp | GCTTCCTCTACCAGCCCACGTCCTGAACCAGCTTTTAGAGCTGGTTCAAATAGCAGCGGGGGCAGGTGCTaGGTGAGAGACTTGAGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: ASSTSPRPEPAFRAGSNSSGGRC*VRDLSP Trigger: GGGACTCAAGTCTCTCACCAAGCACCTGCCCCCGCT...GCTATTTGAACCAGCTCTAAAAGCTGGTTCAGGACGTGGGCTGGTAGAGGAAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000062213.13 ENSMUST00000084493.8 ENSMUST00000111954.11 |
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| CDS TCA 90 bp | GATCACCGGGGGAATGGCCATGGCGGGAATCGCCATTCCGATTCTTaGTATCACCACCTGGAAGATTCCCTGTTTGGCAGCAGTCACCGA | + |
|
Preference number: 5 (lower is better) Translates to: DHRGNGHGGNRHSDS*YHHLEDSLFGSSHR Trigger: TCGGTGACTGCTGCCAAACAGGGAATCTTCCAGGTGGTGATATCAAGAATCGGAATGGCGATTCCCGCCATGGCCATTCCCCCGGTGATC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000062213.13 ENSMUST00000111954.11 |
||
| CDS CCA 90 bp | GCTGACATACGGCCAATCAAGACCACCTTCTCCCCCGTGTCCGGATaGAATGCTGAGTCATACACGTATTTGGCTCGCCATAGCTGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: ADIRPIKTTFSPVSG*NAESYTYLARHSWS Trigger: GGACCAGCTATGGCGAGCCAAATACGTGTATGACTCAGCATTCCATCCGGACACGGGGGAGAAGGTGGTCTTGATTGGCCGTATGTCAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000062213.13 ENSMUST00000084493.8 ENSMUST00000111954.11 ENSMUST00000237222.2 |
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| CDS CCA 90 bp | ATGGCCATGGCGGGAATCGCCATTCCGATTCTTGATATCACCACCTaGAAGATTCCCTGTTTGGCAGCAGTCACCGAGTGGCCAAGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: MAMAGIAIPILDITT*KIPCLAAVTEWPSL Trigger: GAGGCTTGGCCACTCGGTGACTGCTGCCAAACAGGGAATCTTCCAGGTGGTGATATCAAGAATCGGAATGGCGATTCCCGCCATGGCCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062213.13 ENSMUST00000111954.11 |
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| CDS TCA 90 bp | ATGCTGAGTCATACACGTATTTGGCTCGCCATAGCTGGTCCTCAGTaGGACCCGGGGTTGCCACACCAGCCCTGTAATTCTGCACGATGT | + |
|
Preference number: 5 (lower is better) Translates to: MLSHTRIWLAIAGPQ*DPGLPHQPCNSARC Trigger: ACATCGTGCAGAATTACAGGGCTGGTGTGGCAACCCCGGGTCTCACTGAGGACCAGCTATGGCGAGCCAAATACGTGTATGACTCAGCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000062213.13 ENSMUST00000084493.8 ENSMUST00000111954.11 ENSMUST00000237222.2 |
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| CDS CCA 90 bp | TCGCCATTCCGATTCTTGATATCACCACCTGGAAGATTCCCTGTTTaGCAGCAGTCACCGAGTGGCCAAGCCTCTGACCAGCCTCATCAG | + |
|
Preference number: 5 (lower is better) Translates to: SPFRFLISPPGRFPV*QQSPSGQASDQPHQ Trigger: CTGATGAGGCTGGTCAGAGGCTTGGCCACTCGGTGACTGCTGCCAAACAGGGAATCTTCCAGGTGGTGATATCAAGAATCGGAATGGCGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062213.13 ENSMUST00000111954.11 |
||
| CDS-3UTR CAA 90 bp | AGTCTAAGGTTGCTGGTCTCAGTGGCTGCTCCCCACATCAAGCCCCCTTGCCCACGAGGTTCCTGGATGTaGATATTTAAGGGCAGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: SLRLLVSVAAPHIKPPCPRGSWM*IFKGRS Trigger: TGACCTGCCCTTAAATATCAACATCCAGGAACCTCG...TGGGCAAGGGGGCTTGATGTGGGGAGCAGCCACTGAGACCAGCAACCTTAGACT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000062213.13 ENSMUST00000084493.8 ENSMUST00000111954.11 |
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| CDS-3UTR CAA 90 bp | TGGCAGTTCCTGAAGGGAATGCTTGCTCTGCCTGTGTTGTGTGGCTTTCTGATTGGGATGTTGATGCAGTaGGCAGCGGCCACAGCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: WQFLKGMLALPVLCGFLIGMLMQ*AAATAA Trigger: TGCAGCTGTGGCCGCTGCCAACTGCATCAACATCCC...AATCAGAAAGCCACACAACACAGGCAGAGCAAGCATTCCCTTCAGGAACTGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000062213.13 ENSMUST00000084493.8 ENSMUST00000111954.11 |
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| CDS-3UTR CAA 90 bp | GCTTCCTCTACCAGCCCACGTCCTGAACCAGCTTTTAGAGCTGGTTCAAATAGCTGCTTGGTGAGAGACTaGAGTCCCAGAGCAGTAGCC | + |
|
Preference number: 5 (lower is better) Translates to: ASSTSPRPEPAFRAGSNSCLVRD*SPRAVA Trigger: GGCTACTGCTCTGGGACTCAAGTCTCTCACCAAGCA...GCTATTTGAACCAGCTCTAAAAGCTGGTTCAGGACGTGGGCTGGTAGAGGAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000062213.13 ENSMUST00000084493.8 ENSMUST00000111954.11 |
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| CDS-3UTR CAA 90 bp | AAGAAAGAGAGAAAGAAAGGAAAAGAGAAAGAGGGCACTGGGGATGTCGCTCAGAGCGGGGGCAGGTGCTaGGTGAGAGACTTGAGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: KKERKKGKEKEGTGDVAQSGGRC*VRDLSP Trigger: GGGACTCAAGTCTCTCACCAAGCACCTGCCCCCGCT...CTGAGCGACATCCCCAGTGCCCTCTTTCTCTTTTCCTTTCTTTCTCTCTTTCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000062213.13 ENSMUST00000084493.8 ENSMUST00000111954.11 |
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| CDS-3UTR CAA 90 bp | GATTTGGCGTGGAGATATAATTCTATGCCCTGGAGTCAGTATCACCCACACCATGGGATGTTGATGCAGTaGGCAGCGGCCACAGCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: DLAWRYNSMPWSQYHPHHGMLMQ*AAATAA Trigger: TGCAGCTGTGGCCGCTGCCAACTGCATCAACATCCC...ATGGTGTGGGTGATACTGACTCCAGGGCATAGAATTATATCTCCACGCCAAATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062213.13 ENSMUST00000111954.11 |
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| CDS-3UTR CAA 90 bp | TGGCAGTTCCTGAAGGGAATGCTTGCTCTGCCTGTGTTGTGTGGCTTTCTGATTTGGAAGATTCCCTGTTaGGCAGCAGTCACCGAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: WQFLKGMLALPVLCGFLIWKIPC*AAVTEW Trigger: CCACTCGGTGACTGCTGCCAAACAGGGAATCTTCCA...AATCAGAAAGCCACACAACACAGGCAGAGCAAGCATTCCCTTCAGGAACTGCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000062213.13 ENSMUST00000084493.8 ENSMUST00000111954.11 |
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| CDS-3UTR CAA 90 bp | ATTTGGCGTGGAGATATAATTCTATGCCCTGGAGTCAGTATCACCCACACCATTGGGATGTTGATGCAGTaGGCAGCGGCCACAGCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: IWRGDIILCPGVSITHTIGMLMQ*AAATAA Trigger: TGCAGCTGTGGCCGCTGCCAACTGCATCAACATCCC...AATGGTGTGGGTGATACTGACTCCAGGGCATAGAATTATATCTCCACGCCAAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062213.13 ENSMUST00000111954.11 |
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| CDS-3UTR CAA 90 bp | TATAATTCTATGCCCTGGAGTCAGTATCACCCACACCATTCCCGAACTCATCTTCTCATCAGGGGGATGTaGATGCAGTTGGCAGCGGCC | + |
|
Preference number: 5 (lower is better) Translates to: YNSMPWSQYHPHHSRTHLLIRGM*MQLAAA Trigger: GGCCGCTGCCAACTGCATCAACATCCCCCTGATGAG...AAGATGAGTTCGGGAATGGTGTGGGTGATACTGACTCCAGGGCATAGAATTATA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000062213.13 ENSMUST00000111954.11 |
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| CDS-3UTR CAA 90 bp | GCTTCCTCTACCAGCCCACGTCCTGAACCAGCTTTTAGAGCTGGTTCAAATAGCCGAGGTTCCTGGATGTaGATATTTAAGGGCAGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: ASSTSPRPEPAFRAGSNSRGSWM*IFKGRS Trigger: TGACCTGCCCTTAAATATCAACATCCAGGAACCTCG...GCTATTTGAACCAGCTCTAAAAGCTGGTTCAGGACGTGGGCTGGTAGAGGAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000062213.13 ENSMUST00000084493.8 ENSMUST00000111954.11 |
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| CDS-3UTR CAA 90 bp | CCAGCCCACGTCCTGAACCAGCTTTTAGAGCTGGTTCAAATAGCTGTATTTGAATGCTTGGTGAGAGACTaGAGTCCCAGAGCAGTAGCC | + |
|
Preference number: 5 (lower is better) Translates to: PAHVLNQLLELVQIAVFECLVRD*SPRAVA Trigger: GGCTACTGCTCTGGGACTCAAGTCTCTCACCAAGCA...TTCAAATACAGCTATTTGAACCAGCTCTAAAAGCTGGTTCAGGACGTGGGCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000062213.13 ENSMUST00000084493.8 ENSMUST00000111954.11 |
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| CDS-3UTR CAA 90 bp | AAGAAAGAGAGAAAGAAAGGAAAAGAGAAAGAGGGCACTGGGGATGTCGCTCAGGAGTCATACACGTATTaGGCTCGCCATAGCTGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: KKERKKGKEKEGTGDVAQESYTY*ARHSWS Trigger: GGACCAGCTATGGCGAGCCAAATACGTGTATGACTC...CTGAGCGACATCCCCAGTGCCCTCTTTCTCTTTTCCTTTCTTTCTCTCTTTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000062213.13 ENSMUST00000084493.8 ENSMUST00000111954.11 |
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| CDS-3UTR CAA 90 bp | ATTTGGCGTGGAGATATAATTCTATGCCCTGGAGTCAGTATCACCCACACCATTTGGAAGATTCCCTGTTaGGCAGCAGTCACCGAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: IWRGDIILCPGVSITHTIWKIPC*AAVTEW Trigger: CCACTCGGTGACTGCTGCCAAACAGGGAATCTTCCA...AATGGTGTGGGTGATACTGACTCCAGGGCATAGAATTATATCTCCACGCCAAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062213.13 ENSMUST00000111954.11 |
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| CDS-3UTR CAA 90 bp | AAGAAAGAGAGAAAGAAAGGAAAAGAGAAAGAGGGCACTGGGGATGTCGCTCAGATCGATGCTGGGGTTTaGTGCTTGGATCTGAGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: KKERKKGKEKEGTGDVAQIDAGV*CLDLSS Trigger: AGAGCTCAGATCCAAGCACAAAACCCCAGCATCGAT...CTGAGCGACATCCCCAGTGCCCTCTTTCTCTTTTCCTTTCTTTCTCTCTTTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000062213.13 ENSMUST00000084493.8 ENSMUST00000111954.11 |
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| CDS-3UTR CAA 90 bp | AATTCTATGCCCTGGAGTCAGTATCACCCACACCATTCCCGAACTCATCTTCTAATCGATGCTGGGGTTTaGTGCTTGGATCTGAGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: NSMPWSQYHPHHSRTHLLIDAGV*CLDLSS Trigger: AGAGCTCAGATCCAAGCACAAAACCCCAGCATCGAT...TAGAAGATGAGTTCGGGAATGGTGTGGGTGATACTGACTCCAGGGCATAGAATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062213.13 ENSMUST00000111954.11 |
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| CDS-3UTR CAA 90 bp | AAGAAAGAGAGAAAGAAAGGAAAAGAGAAAGAGGGCACTGGGGATGTCGCTCAGCGAGGTTCCTGGATGTaGATATTTAAGGGCAGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: KKERKKGKEKEGTGDVAQRGSWM*IFKGRS Trigger: TGACCTGCCCTTAAATATCAACATCCAGGAACCTCG...CTGAGCGACATCCCCAGTGCCCTCTTTCTCTTTTCCTTTCTTTCTCTCTTTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000062213.13 ENSMUST00000084493.8 ENSMUST00000111954.11 |
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| CDS-3UTR CAA 90 bp | GATTTGGCGTGGAGATATAATTCTATGCCCTGGAGTCAGTATCACCCACACCATTCGCCATTCCGATTCTaGATATCACCACCTGGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: DLAWRYNSMPWSQYHPHHSPFRF*ISPPGR Trigger: TCTTCCAGGTGGTGATATCAAGAATCGGAATGGCGA...ATGGTGTGGGTGATACTGACTCCAGGGCATAGAATTATATCTCCACGCCAAATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062213.13 ENSMUST00000111954.11 |
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| CDS-3UTR CAA 90 bp | AAGAAAGAGAGAAAGAAAGGAAAAGAGAAAGAGGGCACTGGGGATGTCGCTCAGTCGCCATTCCGATTCTaGATATCACCACCTGGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: KKERKKGKEKEGTGDVAQSPFRF*ISPPGR Trigger: TCTTCCAGGTGGTGATATCAAGAATCGGAATGGCGA...CTGAGCGACATCCCCAGTGCCCTCTTTCTCTTTTCCTTTCTTTCTCTCTTTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062213.13 ENSMUST00000111954.11 |
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| CDS CAA 72 bp | CCCACCTGCAGCTCCCTCTGCCTCATCAGGGGGATGTaGATGCAGTTGGCAGCGGCCACAGCTGCAAAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: PTCSSLCLIRGM*MQLAAATAAKG Trigger: GCCCTTTGCAGCTGTGGCCGCTGCCAACTGCATCAACATCCCCCTGATGAGGCAGAGGGAGCTGCAGGTGGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000062213.13 ENSMUST00000084493.8 ENSMUST00000111954.11 |
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| CDS TCA 72 bp | CCACCTGCAGCTCCCTCTGCCTCATCAGGGGGATGTTaGTGCAGTTGGCAGCGGCCACAGCTGCAAAGGGCA | + |
|
Preference number: 6 (lower is better) Translates to: PPAAPSASSGGC*CSWQRPQLQRA Trigger: TGCCCTTTGCAGCTGTGGCCGCTGCCAACTGCATCAACATCCCCCTGATGAGGCAGAGGGAGCTGCAGGTGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000062213.13 ENSMUST00000084493.8 ENSMUST00000111954.11 |
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| CDS TCA 72 bp | CCCTGTTTGGCAGCAGTCACCGAGTGGCCAAGCCTCTaGCCAGCCTCATCAGTCACTGGGATGCCCACCTGC | + |
|
Preference number: 6 (lower is better) Translates to: PCLAAVTEWPSL*PASSVTGMPTC Trigger: GCAGGTGGGCATCCCAGTGACTGATGAGGCTGGTCAGAGGCTTGGCCACTCGGTGACTGCTGCCAAACAGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000062213.13 ENSMUST00000084493.8 ENSMUST00000111954.11 |
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| CDS CAA 90 bp | ACCTTCTCCCCCGTGTCCGGATGGAATGCTGAGTCATACACGTATTaGGCTCGCCATAGCTGGTCCTCAGTGAGACCCGGGGTTGCCACA | + |
|
Preference number: 6 (lower is better) Translates to: TFSPVSGWNAESYTY*ARHSWSSVRPGVAT Trigger: TGTGGCAACCCCGGGTCTCACTGAGGACCAGCTATGGCGAGCCAAATACGTGTATGACTCAGCATTCCATCCGGACACGGGGGAGAAGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000062213.13 ENSMUST00000084493.8 ENSMUST00000111954.11 ENSMUST00000237222.2 |
||
| CDS CCA 72 bp | AGAAGCCTACCAGTCCCACCTGGAAGATTCCCTGTTTaGCAGCAGTCACCGAGTGGCCAAGCCTCTGACCAG | + |
|
Preference number: 6 (lower is better) Translates to: RSLPVPPGRFPV*QQSPSGQASDQ Trigger: CTGGTCAGAGGCTTGGCCACTCGGTGACTGCTGCCAAACAGGGAATCTTCCAGGTGGGACTGGTAGGCTTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084493.8 |
||
| CDS CAA 72 bp | CCCGTGTCCGGATGGAATGCTGAGTCATACACGTATTaGGCTCGCCATAGCTGGTCCTCAGTGAGACCCGGG | + |
|
Preference number: 6 (lower is better) Translates to: PVSGWNAESYTY*ARHSWSSVRPG Trigger: CCCGGGTCTCACTGAGGACCAGCTATGGCGAGCCAAATACGTGTATGACTCAGCATTCCATCCGGACACGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000062213.13 ENSMUST00000084493.8 ENSMUST00000111954.11 ENSMUST00000237222.2 |
||
| CDS CCA 72 bp | AATGCTGAGTCATACACGTATTTGGCTCGCCATAGCTaGTCCTCAGTGAGACCCGGGGTTGCCACACCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: NAESYTYLARHS*SSVRPGVATPA Trigger: GGCTGGTGTGGCAACCCCGGGTCTCACTGAGGACCAGCTATGGCGAGCCAAATACGTGTATGACTCAGCATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000062213.13 ENSMUST00000084493.8 ENSMUST00000111954.11 ENSMUST00000237222.2 |
||
| CDS CCA 72 bp | GTGCTTGGATCTGAGCTCTCAGCTCCGGCTCCAGCCTaGTCACATGTATGGAGCTTCTCTGAGGGAACAGAG | + |
|
Preference number: 6 (lower is better) Translates to: VLGSELSAPAPA*SHVWSFSEGTE Trigger: CTCTGTTCCCTCAGAGAAGCTCCATACATGTGACCAGGCTGGAGCCGGAGCTGAGAGCTCAGATCCAAGCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000062213.13 ENSMUST00000084493.8 ENSMUST00000111954.11 |
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| CDS TCA 72 bp | CATACACGTATTTGGCTCGCCATAGCTGGTCCTCAGTaGGACCCGGGGTTGCCACACCAGCCCTGTAATTCT | + |
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Preference number: 6 (lower is better) Translates to: HTRIWLAIAGPQ*DPGLPHQPCNS Trigger: AGAATTACAGGGCTGGTGTGGCAACCCCGGGTCTCACTGAGGACCAGCTATGGCGAGCCAAATACGTGTATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000062213.13 ENSMUST00000084493.8 ENSMUST00000111954.11 ENSMUST00000237222.2 |
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| CDS TCA 72 bp | GGGAATGGCCATGGCGGGAATCGCCATTCCGATTCTTaGTATCACCACCTGGAAGATTCCCTGTTTGGCAGC | + |
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Preference number: 6 (lower is better) Translates to: GNGHGGNRHSDS*YHHLEDSLFGS Trigger: GCTGCCAAACAGGGAATCTTCCAGGTGGTGATATCAAGAATCGGAATGGCGATTCCCGCCATGGCCATTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062213.13 ENSMUST00000111954.11 |
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| CDS CCA 72 bp | CGATTCTTGATATCACCACCTGGAAGATTCCCTGTTTaGCAGCAGTCACCGAGTGGCCAAGCCTCTGACCAG | + |
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Preference number: 6 (lower is better) Translates to: RFLISPPGRFPV*QQSPSGQASDQ Trigger: CTGGTCAGAGGCTTGGCCACTCGGTGACTGCTGCCAAACAGGGAATCTTCCAGGTGGTGATATCAAGAATCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062213.13 ENSMUST00000111954.11 |
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| CDS CAA 72 bp | GGGGAATGGCCATGGCGGGAATCGCCATTCCGATTCTaGATATCACCACCTGGAAGATTCCCTGTTTGGCAG | + |
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Preference number: 6 (lower is better) Translates to: GEWPWRESPFRF*ISPPGRFPVWQ Trigger: CTGCCAAACAGGGAATCTTCCAGGTGGTGATATCAAGAATCGGAATGGCGATTCCCGCCATGGCCATTCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062213.13 ENSMUST00000111954.11 |
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| CDS GCA 72 bp | AGCAGCAGATTTCGGGGATCAGTGACTGTGAAGAAATaGCGGGCTCTGCCTAGAAATGTGCTTTGGTCCCAC | + |
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Preference number: 6 (lower is better) Translates to: SSRFRGSVTVKK*RALPRNVLWSH Trigger: GTGGGACCAAAGCACATTTCTAGGCAGAGCCCGGCATTTCTTCACAGTCACTGATCCCCGAAATCTGCTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000062213.13 ENSMUST00000084493.8 ENSMUST00000111954.11 ENSMUST00000237222.2 |
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