Pregenerated sensors for SFXN2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025036Ensembl transcript IDs: ENSMUST00000026011.8, ENSMUST00000236845.2
Found 118 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTCTGTAGACCAGGCTGGCCTCGATCTCAGAGATCCGCCTGCCTCTaGCCAGAGGGTACAGGATTAAAGGTGCTGCCCTGCATCTCTCCT | + |
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Preference number: 1 (lower is better) Translates to: LCRPGWPRSQRSACL*PEGTGLKVLPCISP Trigger: AGGAGAGATGCAGGGCAGCACCTTTAATCCTGTACCCTCTGGGCAGAGGCAGGCGGATCTCTGAGATCGAGGCCAGCCTGGTCTACAGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026011.8 |
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| 3UTR GCA 90 bp | AACTCACTCTGTAGACCAGGCTGGCCTCGATCTCAGAGATCCGCCTaGCTCTGCCCAGAGGGTACAGGATTAAAGGTGCTGCCCTGCATC | + |
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Preference number: 1 (lower is better) Translates to: NSLCRPGWPRSQRSA*LCPEGTGLKVLPCI Trigger: GATGCAGGGCAGCACCTTTAATCCTGTACCCTCTGGGCAGAGGCAGGCGGATCTCTGAGATCGAGGCCAGCCTGGTCTACAGAGTGAGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026011.8 |
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| 3UTR GCA 90 bp | CTCCAGCCTCTCCATGATGACAGGCAACAGGATCATGCCAGGGGCTaGCATGGTGATCCGAGAGATAACCACTTGTGCGATGCCCACAGC | + |
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Preference number: 1 (lower is better) Translates to: LQPLHDDRQQDHARG*HGDPRDNHLCDAHS Trigger: GCTGTGGGCATCGCACAAGTGGTTATCTCTCGGATCACCATGGCAGCCCCTGGCATGATCCTGTTGCCTGTCATCATGGAGAGGCTGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236845.2 |
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| 3UTR TCA 90 bp | TATCCTAAACTGTGTGAGCACCTCCCATACACCAGCAACCTCTGCTaGGAAGACCTCTGCTTCTGGTCCCAAGGGTCAGGGGGCAAGGAC | + |
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Preference number: 1 (lower is better) Translates to: YPKLCEHLPYTSNLC*EDLCFWSQGSGGKD Trigger: GTCCTTGCCCCCTGACCCTTGGGACCAGAAGCAGAGGTCTTCTCAGCAGAGGTTGCTGGTGTATGGGAGGTGCTCACACAGTTTAGGATA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026011.8 |
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| 3UTR CCA 90 bp | AAAGAGGAATGTAGACACAGGTATGCACAGCTGCCAGGGAAAAGCTaGTCCACGCGGTGTACCGATTGGTCCTTGCAGGCACGGAGCACT | + |
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Preference number: 1 (lower is better) Translates to: KEECRHRYAQLPGKS*STRCTDWSLQARST Trigger: AGTGCTCCGTGCCTGCAAGGACCAATCGGTACACCGCGTGGACCAGCTTTTCCCTGGCAGCTGTGCATACCTGTGTCTACATTCCTCTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236845.2 |
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| 3UTR CCA 90 bp | TTTTCCTTGTCTTTTCAAGACAGGGTTTCTCTGTGTAGTCCTGGCTaGCCAGGAACTCACTCTGTAGACCAGGCTGGCCTCGATCTCAGA | + |
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Preference number: 1 (lower is better) Translates to: FSLSFQDRVSLCSPG*PGTHSVDQAGLDLR Trigger: TCTGAGATCGAGGCCAGCCTGGTCTACAGAGTGAGTTCCTGGCCAGCCAGGACTACACAGAGAAACCCTGTCTTGAAAAGACAAGGAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026011.8 |
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| 3UTR CCA 90 bp | TGCCGAACCGACCTTGGCTTTCTAGGAGGGACAGTGAAAGTGTTCTaGATTACAGTAGTGACAACTGTAGCACTTTGTGACTGGACTGAA | + |
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Preference number: 1 (lower is better) Translates to: CRTDLGFLGGTVKVF*ITVVTTVALCDWTE Trigger: TTCAGTCCAGTCACAAAGTGCTACAGTTGTCACTACTGTAATCCAGAACACTTTCACTGTCCCTCCTAGAAAGCCAAGGTCGGTTCGGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236845.2 |
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| 3UTR-3UTR CCA 90 bp | GGTAAGAGCTGCCGCTGCTCTTCAAAAGGACCAGGGTTTGACCGCAGGCTGGCTGAAGACCTCTGCTTCTaGTCCCAAGGGTCAGGGGGC | + |
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Preference number: 2 (lower is better) Translates to: GKSCRCSSKGPGFDRRLAEDLCF*SQGSGG Trigger: GCCCCCTGACCCTTGGGACCAGAAGCAGAGGTCTTC...AGCCAGCCTGCGGTCAAACCCTGGTCCTTTTGAAGAGCAGCGGCAGCTCTTACC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026011.8 |
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| 3UTR-3UTR GCA 90 bp | CGCCTGCCTCTGCCCAGAGGGTACAGGATTAAAGGTGCTGCCCTGCATCTCTCCCGGCATGCAGAGACATaGATGGGAGCAAAACACCCA | + |
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Preference number: 2 (lower is better) Translates to: RLPLPRGYRIKGAALHLSRHAET*MGAKHP Trigger: TGGGTGTTTTGCTCCCATGCATGTCTCTGCATGCCG...GGAGAGATGCAGGGCAGCACCTTTAATCCTGTACCCTCTGGGCAGAGGCAGGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026011.8 |
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| 3UTR-3UTR TCA 90 bp | ACTAAATGGATAAGGGTTTGGCAGCGGGTGGGGGTGTGGCTGCTGCCGAACCGAGATAATTCACATTCCTaGGGGAAGAGTCCGCACGCC | + |
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Preference number: 2 (lower is better) Translates to: TKWIRVWQRVGVWLLPNRDNSHS*GKSPHA Trigger: GGCGTGCGGACTCTTCCCTCAGGAATGTGAATTATC...TCGGTTCGGCAGCAGCCACACCCCCACCCGCTGCCAAACCCTTATCCATTTAGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000236845.2 |
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| 3UTR-3UTR GCA 90 bp | TCCGCACGCCACTGGCACCATAAAGAGGAGGAAGCAGCCACACAGCAAGACCTGACAGGTATGCACAGCTaGCAGGGAAAAGCTGGTCCA | + |
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Preference number: 2 (lower is better) Translates to: SARHWHHKEEEAATQQDLTGMHS*QGKAGP Trigger: TGGACCAGCTTTTCCCTGGCAGCTGTGCATACCTGT...CAGGTCTTGCTGTGTGGCTGCTTCCTCCTCTTTATGGTGCCAGTGGCGTGCGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236845.2 |
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| 3UTR-3UTR GCA 90 bp | TGGAAAGAGGGCTCAGCAGGTAAGAGCTGCCGCTGCTCTTCAAAAGGACCAGGGTCAGATGATCTGACATaGTCTCTGACCTCTGTGGGC | + |
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Preference number: 2 (lower is better) Translates to: WKEGSAGKSCRCSSKGPGSDDLT*SLTSVG Trigger: GCCCACAGAGGTCAGAGAGCATGTCAGATCATCTGA...CCCTGGTCCTTTTGAAGAGCAGCGGCAGCTCTTACCTGCTGAGCCCTCTTTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026011.8 |
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| 3UTR-3UTR GCA 90 bp | TATGCACAGCTGCCAGGGAAAAGCTGGTCCACGCGGTGTACCGATTGGTCCTTGGCTTTCAGACCTTATTaGAAAGAGGAATGTAGACAC | + |
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Preference number: 2 (lower is better) Translates to: YAQLPGKSWSTRCTDWSLAFRPY*KEECRH Trigger: GTGTCTACATTCCTCTTTGCAATAAGGTCTGAAAGC...CAAGGACCAATCGGTACACCGCGTGGACCAGCTTTTCCCTGGCAGCTGTGCATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026011.8 |
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| 3UTR CAA 90 bp | AGGGAAGGAAGGCAGCAGGAAATCATCCCACTCACAGTGAGGGACTaGACTTGTAAAACAGAGAAGGCAATGAGAGAAGAGACCTCTCAG | + |
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Preference number: 2 (lower is better) Translates to: REGRQQEIIPLTVRD*TCKTEKAMREETSQ Trigger: CTGAGAGGTCTCTTCTCTCATTGCCTTCTCTGTTTTACAAGTCAAGTCCCTCACTGTGAGTGGGATGATTTCCTGCTGCCTTCCTTCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026011.8 |
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| 3UTR-3UTR TCA 90 bp | AGGTGTCCAAGTGAGGCTCCACATCCCACCAGCACTCAGCAATCTTTGGTATGTTCTTCCCACCCAAATTaGGGCTATTCTATTCCCCAT | + |
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Preference number: 2 (lower is better) Translates to: RCPSEAPHPTSTQQSLVCSSHPN*GYSIPH Trigger: ATGGGGAATAGAATAGCCTCAATTTGGGTGGGAAGA...ACATACCAAAGATTGCTGAGTGCTGGTGGGATGTGGAGCCTCACTTGGACACCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026011.8 |
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| 3UTR-3UTR TCA 90 bp | ACTCAGAAATCAGCCTGCCTCTGCCTCCTGAATCTAAAGATGTGTGCCACCACTATTGAATCAGCTTTGTaGATGCCAGGCAAACGCTCC | + |
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Preference number: 2 (lower is better) Translates to: TQKSACLCLLNLKMCATTIESAL*MPGKRS Trigger: GGAGCGTTTGCCTGGCATTCACAAAGCTGATTCAAT...AGTGGTGGCACACATCTTTAGATTCAGGAGGCAGAGGCAGGCTGATTTCTGAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026011.8 |
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| 3UTR-3UTR GCA 90 bp | CCTCTGCCCAGAGGGTACAGGATTAAAGGTGCTGCCCTGCATCTCTCCTACATGGGTAAATGTTTCTCTTaGTTAGGAAGGAGGAAGCAA | + |
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Preference number: 2 (lower is better) Translates to: PLPRGYRIKGAALHLSYMGKCFS*LGRRKQ Trigger: TTGCTTCCTCCTTCCTAAGCAAGAGAAACATTTACC...CATGTAGGAGAGATGCAGGGCAGCACCTTTAATCCTGTACCCTCTGGGCAGAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026011.8 |
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| 3UTR-3UTR GCA 90 bp | GACCTCTCAGCTAAAGGTCCCAGAAGTGGATTTGGACATGATATTAAGACAGAATCTCAGAGATCCGCCTaGCTCTGCCCAGAGGGTACA | + |
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Preference number: 2 (lower is better) Translates to: DLSAKGPRSGFGHDIKTESQRSA*LCPEGT Trigger: TGTACCCTCTGGGCAGAGGCAGGCGGATCTCTGAGA...TTCTGTCTTAATATCATGTCCAAATCCACTTCTGGGACCTTTAGCTGAGAGGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026011.8 |
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| 3UTR-3UTR TCA 90 bp | GACCTCTCAGCTAAAGGTCCCAGAAGTGGATTTGGACATGATATTAAGACAGAAACCAGCAACCTCTGCTaGGAAGACCTCTGCTTCTGG | + |
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Preference number: 2 (lower is better) Translates to: DLSAKGPRSGFGHDIKTETSNLC*EDLCFW Trigger: CCAGAAGCAGAGGTCTTCTCAGCAGAGGTTGCTGGT...TTCTGTCTTAATATCATGTCCAAATCCACTTCTGGGACCTTTAGCTGAGAGGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026011.8 |
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| 3UTR-3UTR GCA 90 bp | CTCCTACATGTTTTTAAGGCTGTAGTCCTGGTGAATTCCCACTCAGAGGTGTCCACTCAGAAATCAGCCTaGCTCTGCCTCCTGAATCTA | + |
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Preference number: 2 (lower is better) Translates to: LLHVFKAVVLVNSHSEVSTQKSA*LCLLNL Trigger: TAGATTCAGGAGGCAGAGGCAGGCTGATTTCTGAGT...GGACACCTCTGAGTGGGAATTCACCAGGACTACAGCCTTAAAAACATGTAGGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026011.8 |
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| 3UTR-3UTR GCA 90 bp | GACCTCTCAGCTAAAGGTCCCAGAAGTGGATTTGGACATGATATTAAGACAGAAACAGGTATGCACAGCTaGCAGGGAAAAGCTGGTCCA | + |
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Preference number: 2 (lower is better) Translates to: DLSAKGPRSGFGHDIKTETGMHS*QGKAGP Trigger: TGGACCAGCTTTTCCCTGGCAGCTGTGCATACCTGT...TTCTGTCTTAATATCATGTCCAAATCCACTTCTGGGACCTTTAGCTGAGAGGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026011.8 |
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| 3UTR-3UTR GCA 90 bp | TGCTGCCGAACCGACCTTGGCTTTCTAGGAGGGACAGTGAAAGTGTTCTGGATTCATCTCAGACCTTATTaGAAAGAGGAATGTAGACAC | + |
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Preference number: 2 (lower is better) Translates to: CCRTDLGFLGGTVKVFWIHLRPY*KEECRH Trigger: GTGTCTACATTCCTCTTTGCAATAAGGTCTGAGATG...AATCCAGAACACTTTCACTGTCCCTCCTAGAAAGCCAAGGTCGGTTCGGCAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236845.2 |
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| 3UTR-3UTR TCA 90 bp | CTCCTACATGTTTTTAAGGCTGTAGTCCTGGTGAATTCCCACTCAGAGGTGTCCTACGGCACAAAGAATTaGATCAGCTTTGTGAATGCC | + |
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Preference number: 2 (lower is better) Translates to: LLHVFKAVVLVNSHSEVSYGTKN*ISFVNA Trigger: GGCATTCACAAAGCTGATTCAATTCTTTGTGCCGTA...GGACACCTCTGAGTGGGAATTCACCAGGACTACAGCCTTAAAAACATGTAGGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026011.8 |
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| 3UTR-3UTR CCA 90 bp | GCATCTCTCCTACATGTTTTTAAGGCTGTAGTCCTGGTGAATTCCCACTCAGAGTCCTTTATCTCTCCCTaGATAAGGAGCTGGAAAGAG | + |
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Preference number: 2 (lower is better) Translates to: ASLLHVFKAVVLVNSHSESFISP*IRSWKE Trigger: CTCTTTCCAGCTCCTTATCCAGGGAGAGATAAAGGA...CTCTGAGTGGGAATTCACCAGGACTACAGCCTTAAAAACATGTAGGAGAGATGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026011.8 |
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| 3UTR CAA 90 bp | GCAATGAGAGAAGAGACCTCTCAGCTAAAGGTCCCAGAAGTGGATTaGGACATGATATTAAGACAGAATAGTCATTTTTCCAAGGCGCAG | + |
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Preference number: 2 (lower is better) Translates to: AMREETSQLKVPEVD*DMILRQNSHFSKAQ Trigger: CTGCGCCTTGGAAAAATGACTATTCTGTCTTAATATCATGTCCAAATCCACTTCTGGGACCTTTAGCTGAGAGGTCTCTTCTCTCATTGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026011.8 |
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| 3UTR-3UTR GCA 90 bp | GACCTCTCAGCTAAAGGTCCCAGAAGTGGATTTGGACATGATATTAAGACAGAATTAAAGGTGCTGCCCTaGATCTCTCCTACATGTTTT | + |
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Preference number: 2 (lower is better) Translates to: DLSAKGPRSGFGHDIKTELKVLP*ISPTCF Trigger: AAAACATGTAGGAGAGATGCAGGGCAGCACCTTTAA...TTCTGTCTTAATATCATGTCCAAATCCACTTCTGGGACCTTTAGCTGAGAGGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026011.8 |
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| 3UTR CAA 90 bp | GTTTATTCAATTCATAATGGTGCGTTTGAACAGAATCAGCAAATCTaGCCAGACAAAACTCATTACACACTGACCCCAGGTAAGCCAGTC | + |
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Preference number: 2 (lower is better) Translates to: VYSIHNGAFEQNQQI*PDKTHYTLTPGKPV Trigger: GACTGGCTTACCTGGGGTCAGTGTGTAATGAGTTTTGTCTGGCAAGATTTGCTGATTCTGTTCAAACGCACCATTATGAATTGAATAAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026011.8 |
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| 3UTR-3UTR GCA 90 bp | CAGAATCAGCAAATCTTGCCAGACAAAACTCATTACACACTGACCCCAGGTAAGAAGCATATAAAATTATaGCTGAATCGTACGGCACAA | + |
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Preference number: 2 (lower is better) Translates to: QNQQILPDKTHYTLTPGKKHIKL*LNRTAQ Trigger: TTGTGCCGTACGATTCAGGCATAATTTTATATGCTT...CTTACCTGGGGTCAGTGTGTAATGAGTTTTGTCTGGCAAGATTTGCTGATTCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000026011.8 |
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| 3UTR-3UTR GCA 90 bp | ATGGTGCGTTTGAACAGAATCAGCAAATCTTGCCAGACAAAACTCATTACACACCGTAAAATGGTGGTTTaGCCTACACTTTCATTTTCC | + |
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Preference number: 2 (lower is better) Translates to: MVRLNRISKSCQTKLITHRKMVV*PTLSFS Trigger: GGAAAATGAAAGTGTAGGGCAAACCACCATTTTACG...GTGTGTAATGAGTTTTGTCTGGCAAGATTTGCTGATTCTGTTCAAACGCACCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000026011.8 |
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| 3UTR GCA 72 bp | CCAGGCTGGCCTCGATCTCAGAGATCCGCCTGCCTCTaGCCAGAGGGTACAGGATTAAAGGTGCTGCCCTGC | + |
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Preference number: 3 (lower is better) Translates to: PGWPRSQRSACL*PEGTGLKVLPC Trigger: GCAGGGCAGCACCTTTAATCCTGTACCCTCTGGGCAGAGGCAGGCGGATCTCTGAGATCGAGGCCAGCCTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026011.8 |
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| 3UTR GCA 72 bp | AGGGGCTGCCATGGTGATCCGAGAGATAACCACTTGTaGGATGCCCACAGCCGCAGCTCTCTGAGAATGGCC | + |
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Preference number: 3 (lower is better) Translates to: RGCHGDPRDNHL*DAHSRSSLRMA Trigger: GGCCATTCTCAGAGAGCTGCGGCTGTGGGCATCGCACAAGTGGTTATCTCTCGGATCACCATGGCAGCCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236845.2 |
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| 3UTR CCA 72 bp | CAGCGGGTGGGGGTGTGGCTGCTGCCGAACCGACCTTaGCTTTCTAGGAGGGACAGTGAAAGTGTTCTGGAT | + |
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Preference number: 3 (lower is better) Translates to: QRVGVWLLPNRP*LSRRDSESVLD Trigger: ATCCAGAACACTTTCACTGTCCCTCCTAGAAAGCCAAGGTCGGTTCGGCAGCAGCCACACCCCCACCCGCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000236845.2 |
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| 3UTR-3UTR CAA 90 bp | CAGGTAAGCCAGTCCCCCAGGGAACTAAAGTGGCCCTTTGTGCCCTCCTTAGGCCAAAAGGACCAGGGTTaGACCGCAGGCTGGCTCACA | + |
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Preference number: 3 (lower is better) Translates to: QVSQSPRELKWPFVPSLGQKDQG*TAGWLT Trigger: TGTGAGCCAGCCTGCGGTCAAACCCTGGTCCTTTTG...GCCTAAGGAGGGCACAAAGGGCCACTTTAGTTCCCTGGGGGACTGGCTTACCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026011.8 |
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| 3UTR TCA 72 bp | CTGTGTGAGCACCTCCCATACACCAGCAACCTCTGCTaGGAAGACCTCTGCTTCTGGTCCCAAGGGTCAGGG | + |
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Preference number: 3 (lower is better) Translates to: LCEHLPYTSNLC*EDLCFWSQGSG Trigger: CCCTGACCCTTGGGACCAGAAGCAGAGGTCTTCTCAGCAGAGGTTGCTGGTGTATGGGAGGTGCTCACACAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026011.8 |
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| 3UTR TCA 72 bp | ATCCCAGCACTCGGGAGGCAGAGGCAGGTGGATTTCTaGGTTCGGGGCCAGTCTGGTCTACAGAGTGAGTTC | + |
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Preference number: 3 (lower is better) Translates to: IPALGRQRQVDF*VRGQSGLQSEF Trigger: GAACTCACTCTGTAGACCAGACTGGCCCCGAACTCAGAAATCCACCTGCCTCTGCCTCCCGAGTGCTGGGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026011.8 |
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| 3UTR TCA 72 bp | CTCCTTAGGCTTGTTGGCCCTGGTGGACTTCCTGTCTaGGGTGTCCAAGTGAGGCTCCACATCCCACCAGCA | + |
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Preference number: 3 (lower is better) Translates to: LLRLVGPGGLPV*GVQVRLHIPPA Trigger: TGCTGGTGGGATGTGGAGCCTCACTTGGACACCTCAGACAGGAAGTCCACCAGGGCCAACAAGCCTAAGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026011.8 |
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| 3UTR GCA 72 bp | TGTAGACCAGGCTGGCCTCGATCTCAGAGATCCGCCTaGCTCTGCCCAGAGGGTACAGGATTAAAGGTGCTG | + |
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Preference number: 3 (lower is better) Translates to: CRPGWPRSQRSA*LCPEGTGLKVL Trigger: CAGCACCTTTAATCCTGTACCCTCTGGGCAGAGGCAGGCGGATCTCTGAGATCGAGGCCAGCCTGGTCTACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026011.8 |
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| 3UTR CCA 72 bp | TGTAGACACAGGTATGCACAGCTGCCAGGGAAAAGCTaGTCCACGCGGTGTACCGATTGGTCCTTGCAGGCA | + |
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Preference number: 3 (lower is better) Translates to: CRHRYAQLPGKS*STRCTDWSLQA Trigger: TGCCTGCAAGGACCAATCGGTACACCGCGTGGACCAGCTTTTCCCTGGCAGCTGTGCATACCTGTGTCTACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026011.8 ENSMUST00000236845.2 |
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| 3UTR TCA 72 bp | TTGGCCCTGGTGGACTTCCTGTCTGAGGTGTCCAAGTaGGGCTCCACATCCCACCAGCACTCAGCAATCTTT | + |
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Preference number: 3 (lower is better) Translates to: LALVDFLSEVSK*GSTSHQHSAIF Trigger: AAAGATTGCTGAGTGCTGGTGGGATGTGGAGCCTCACTTGGACACCTCAGACAGGAAGTCCACCAGGGCCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026011.8 |
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| 3UTR GCA 72 bp | GATCTGACATGCTCTCTGACCTCTGTGGGCACGGCATaGAGAGACATGCATGGGAGCAAAACACCCACCCAT | + |
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Preference number: 3 (lower is better) Translates to: DLTCSLTSVGTA*RDMHGSKTPTH Trigger: ATGGGTGGGTGTTTTGCTCCCATGCATGTCTCTGCATGCCGTGCCCACAGAGGTCAGAGAGCATGTCAGATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026011.8 |
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| 3UTR GCA 72 bp | ATAAGGAGCTGGAAAGAGGGCTCAGCAGGTAAGAGCTaGCGCTGCTCTTCAAAAGGACCAGGGTTTGACCGC | + |
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Preference number: 3 (lower is better) Translates to: IRSWKEGSAGKS*RCSSKGPGFDR Trigger: GCGGTCAAACCCTGGTCCTTTTGAAGAGCAGCGGCAGCTCTTACCTGCTGAGCCCTCTTTCCAGCTCCTTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026011.8 |
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| 3UTR CCA 72 bp | TCACATAGCTCCTTTATCTCTCCCTGGATAAGGAGCTaGAAAGAGGGCTCAGCAGGTAAGAGCTGCCGCTGC | + |
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Preference number: 3 (lower is better) Translates to: SHSSFISPWIRS*KEGSAGKSCRC Trigger: GCAGCGGCAGCTCTTACCTGCTGAGCCCTCTTTCCAGCTCCTTATCCAGGGAGAGATAAAGGAGCTATGTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026011.8 |
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| 3UTR CCA 72 bp | TCTTTTCAAGACAGGGTTTCTCTGTGTAGTCCTGGCTaGCCAGGAACTCACTCTGTAGACCAGGCTGGCCTC | + |
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Preference number: 3 (lower is better) Translates to: SFQDRVSLCSPG*PGTHSVDQAGL Trigger: GAGGCCAGCCTGGTCTACAGAGTGAGTTCCTGGCCAGCCAGGACTACACAGAGAAACCCTGTCTTGAAAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026011.8 |
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| 3UTR-3UTR CAA 90 bp | TATGCACAGCTGCCAGGGAAAAGCTGGTCCACGCGGTGTACCGATTGGTCCTTGGTACGGCACAAAGAATaGAATCAGCTTTGTGAATGC | + |
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Preference number: 3 (lower is better) Translates to: YAQLPGKSWSTRCTDWSLVRHKE*NQLCEC Trigger: GCATTCACAAAGCTGATTCAATTCTTTGTGCCGTAC...CAAGGACCAATCGGTACACCGCGTGGACCAGCTTTTCCCTGGCAGCTGTGCATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026011.8 |
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| 3UTR-3UTR CAA 90 bp | CGCCTGCCTCTGCCCAGAGGGTACAGGATTAAAGGTGCTGCCCTGCATCTCTCCCAAAATACCTTGTTCTaGTTCCCTCCCTCTATTTTT | + |
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Preference number: 3 (lower is better) Translates to: RLPLPRGYRIKGAALHLSQNTLF*FPPSIF Trigger: AAAAATAGAGGGAGGGAACAAGAACAAGGTATTTTG...GGAGAGATGCAGGGCAGCACCTTTAATCCTGTACCCTCTGGGCAGAGGCAGGCG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026011.8 |
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| 3UTR GCA 72 bp | ATTGCAAAGAGGAATGTAGACACAGGTATGCACAGCTaGCAGGGAAAAGCTGGTCCACGCGGTGTACCGATT | + |
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Preference number: 3 (lower is better) Translates to: IAKRNVDTGMHS*QGKAGPRGVPI Trigger: AATCGGTACACCGCGTGGACCAGCTTTTCCCTGGCAGCTGTGCATACCTGTGTCTACATTCCTCTTTGCAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026011.8 ENSMUST00000236845.2 |
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| 3UTR GCA 72 bp | CTCACAGTAGTAACTCCAGTTTCAGATGATCTGACATaGTCTCTGACCTCTGTGGGCACGGCATGCAGAGAC | + |
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Preference number: 3 (lower is better) Translates to: LTVVTPVSDDLT*SLTSVGTACRD Trigger: GTCTCTGCATGCCGTGCCCACAGAGGTCAGAGAGCATGTCAGATCATCTGAAACTGGAGTTACTACTGTGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026011.8 |
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| 3UTR CCA 72 bp | GCTGCTCTTCAAAAGGACCAGGGTTTGACCGCAGGCTaGCTCACAGTAGTAACTCCAGTTTCAGATGATCTG | + |
|
Preference number: 3 (lower is better) Translates to: AALQKDQGLTAG*LTVVTPVSDDL Trigger: CAGATCATCTGAAACTGGAGTTACTACTGTGAGCCAGCCTGCGGTCAAACCCTGGTCCTTTTGAAGAGCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026011.8 |
||
| 3UTR TCA 72 bp | ACTCGAAGTCCTTTGGTACAACTGTGTGGTGTCAGATaGATGCTGGCAGCGTTATATCCTCGGGCTCCATCT | + |
|
Preference number: 3 (lower is better) Translates to: TRSPLVQLCGVR*MLAALYPRAPS Trigger: AGATGGAGCCCGAGGATATAACGCTGCCAGCATTCATCTGACACCACACAGTTGTACCAAAGGACTTCGAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236845.2 |
||
| 3UTR CCA 72 bp | CCCCAAGAAGATTCACATAGCTCCTTTATCTCTCCCTaGATAAGGAGCTGGAAAGAGGGCTCAGCAGGTAAG | + |
|
Preference number: 3 (lower is better) Translates to: PQEDSHSSFISP*IRSWKEGSAGK Trigger: CTTACCTGCTGAGCCCTCTTTCCAGCTCCTTATCCAGGGAGAGATAAAGGAGCTATGTGAATCTTCTTGGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026011.8 |
||
| 3UTR CCA 72 bp | AAGCATTCCCAATGGGATAGCCCAGTCAGGGCATCATaGGGAAGAGTAGAGATGAGTCCCCAAGAAGATTCA | + |
|
Preference number: 3 (lower is better) Translates to: KHSQWDSPVRAS*GRVEMSPQEDS Trigger: TGAATCTTCTTGGGGACTCATCTCTACTCTTCCCCATGATGCCCTGACTGGGCTATCCCATTGGGAATGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026011.8 |
||
| 3UTR-3UTR CAA 90 bp | GCCGCTGCTCTTCAAAAGGACCAGGGTTTGACCGCAGGCTGGCTCACAGTAGTATTGAACTTTTTGGGTTaGGTGTTGTTGTTGTTGTTG | + |
|
Preference number: 3 (lower is better) Translates to: AAALQKDQGLTAGWLTVVLNFLG*VLLLLL Trigger: CAACAACAACAACAACACCAAACCCAAAAAGTTCAA...TACTACTGTGAGCCAGCCTGCGGTCAAACCCTGGTCCTTTTGAAGAGCAGCGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026011.8 |
||
| 3UTR-3UTR CAA 90 bp | GGGACAGTGAAAGTGTTCTGGATTACAGTAGTGACAACTGTAGCACTTTGTGACTCTCCATACTTGGCCTaGATGGTGTCCCGTAGCTCT | + |
|
Preference number: 3 (lower is better) Translates to: GTVKVFWITVVTTVALCDSPYLA*MVSRSS Trigger: AGAGCTACGGGACACCATCAAGGCCAAGTATGGAGA...GTCACAAAGTGCTACAGTTGTCACTACTGTAATCCAGAACACTTTCACTGTCCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236845.2 |
||
| 3UTR-3UTR CAA 90 bp | ACAGGATGTACTTGGCTAGTTTTTGATGTAGGGTCTCTTCCTGTTGTCCATACAGGCACTCGAAGTCCTTaGGTACAACTGTGTGGTGTC | + |
|
Preference number: 3 (lower is better) Translates to: TGCTWLVFDVGSLPVVHTGTRSP*VQLCGV Trigger: GACACCACACAGTTGTACCAAAGGACTTCGAGTGCC...TGTATGGACAACAGGAAGAGACCCTACATCAAAAACTAGCCAAGTACATCCTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000236845.2 |
||
| 3UTR GCA 72 bp | TTCTATTCCCCATCTAGCCTGGCTTTCAGACCTTATTaGAAAGAGGAATGTAGACACAGGTATGCACAGCTG | + |
|
Preference number: 3 (lower is better) Translates to: FYSPSSLAFRPY*KEECRHRYAQL Trigger: CAGCTGTGCATACCTGTGTCTACATTCCTCTTTGCAATAAGGTCTGAAAGCCAGGCTAGATGGGGAATAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026011.8 |
||
| 3UTR CCA 72 bp | GACCTTGGCTTTCTAGGAGGGACAGTGAAAGTGTTCTaGATTACAGTAGTGACAACTGTAGCACTTTGTGAC | + |
|
Preference number: 3 (lower is better) Translates to: DLGFLGGTVKVF*ITVVTTVALCD Trigger: GTCACAAAGTGCTACAGTTGTCACTACTGTAATCCAGAACACTTTCACTGTCCCTCCTAGAAAGCCAAGGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236845.2 |
||
| 3UTR GCA 72 bp | ATCAGCCTGCCTCTGCCTCCTGAATCTAAAGATGTGTaGCACCACTATCTGTCAACTTTTGAACTTCTAATC | + |
|
Preference number: 3 (lower is better) Translates to: ISLPLPPESKDV*HHYLSTFELLI Trigger: GATTAGAAGTTCAAAAGTTGACAGATAGTGGTGGCACACATCTTTAGATTCAGGAGGCAGAGGCAGGCTGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026011.8 |
||
| 3UTR GCA 72 bp | GTAGTTCCCATGCAAAGCCCTCCTGCTCATTATAACTaGTGTTCAACACCTTACAGGCCAACTCAACTAAAT | + |
|
Preference number: 3 (lower is better) Translates to: VVPMQSPPAHYN*CSTPYRPTQLN Trigger: ATTTAGTTGAGTTGGCCTGTAAGGTGTTGAACAGCAGTTATAATGAGCAGGAGGGCTTTGCATGGGAACTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236845.2 |
||
| 3UTR TCA 72 bp | CAGGAGAAGAGGAAGAGATTAGTGTATCCTCTGTCCTaGCTGGACAAGGATCACTCGATTTCTAAATATCCT | + |
|
Preference number: 3 (lower is better) Translates to: QEKRKRLVYPLS*LDKDHSISKYP Trigger: AGGATATTTAGAAATCGAGTGATCCTTGTCCAGTCAGGACAGAGGATACACTAATCTCTTCCTCTTCTCCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026011.8 |
||
| 3UTR TCA 72 bp | TATAAAATTATGCCTGAATCGTACGGCACAAAGAATTaGATCAGCTTTGTGAATGCCAGGCAAACGCTCCCA | + |
|
Preference number: 3 (lower is better) Translates to: YKIMPESYGTKN*ISFVNARQTLP Trigger: TGGGAGCGTTTGCCTGGCATTCACAAAGCTGATTCAATTCTTTGTGCCGTACGATTCAGGCATAATTTTATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026011.8 |
||
| 3UTR GCA 72 bp | AGCCTGAGCTTCATCGAAAGGAAAATACCAATTTCATaGTGTCTGAGTTCCATTTTACTGTCTAAGTGGGTG | + |
|
Preference number: 3 (lower is better) Translates to: SLSFIERKIPIS*CLSSILLSKWV Trigger: CACCCACTTAGACAGTAAAATGGAACTCAGACAGCATGAAATTGGTATTTTCCTTTCGATGAAGCTCAGGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236845.2 |
||
| 3UTR-3UTR CAA 90 bp | TTCATAATGGTGCGTTTGAACAGAATCAGCAAATCTTGCCAGACAAAACTCATTACACTTTCATTTTCCTaGTCTTTTCAAGACAGGGTT | + |
|
Preference number: 3 (lower is better) Translates to: FIMVRLNRISKSCQTKLITLSFS*SFQDRV Trigger: AACCCTGTCTTGAAAAGACAAGGAAAATGAAAGTGT...AATGAGTTTTGTCTGGCAAGATTTGCTGATTCTGTTCAAACGCACCATTATGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000026011.8 |
||
| CDS-3UTR GCA 90 bp | ACTAAATGGATAAGGGTTTGGCAGCGGGTGGGGGTGTGGCTGCTGCCGAACCGACGCGCCCCAGGAAAGTaGACTGGTCCCAGCGGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: TKWIRVWQRVGVWLLPNRRAPGK*TGPSGE Trigger: CTCCCCGCTGGGACCAGTGCACTTTCCTGGGGCGCG...TCGGTTCGGCAGCAGCCACACCCCCACCCGCTGCCAAACCCTTATCCATTTAGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000236845.2 |
||
| CDS-3UTR CCA 90 bp | AAAGTGGCCCTTTGTGCCCTCCTTAGGCTTGTTGGCCCTGGTGGACTTCCTGTCTCTCCACCACCGCCTTaGCCCAGTCCAGCTCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: KVALCALLRLVGPGGLPVSPPPP*PSPAPA Trigger: AGCAGGAGCTGGACTGGGCCAAGGCGGTGGTGGAGA...GACAGGAAGTCCACCAGGGCCAACAAGCCTAAGGAGGGCACAAAGGGCCACTTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026011.8 |
||
| CDS-3UTR CCA 90 bp | CATGGTGATCCGAGAGATAACCACTTGTGCGATGCCCACAGCCGCAGCTCTCTGTCTCCACCACCGCCTTaGCCCAGTCCAGCTCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: HGDPRDNHLCDAHSRSSLSPPPP*PSPAPA Trigger: AGCAGGAGCTGGACTGGGCCAAGGCGGTGGTGGAGA...CAGAGAGCTGCGGCTGTGGGCATCGCACAAGTGGTTATCTCTCGGATCACCATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236845.2 |
||
| 3UTR CAA 72 bp | GCTGCCAGGGAAAAGCTGGTCCACGCGGTGTACCGATaGGTCCTTGCAGGCACGGAGCACTTAGAGACCCTT | + |
|
Preference number: 4 (lower is better) Translates to: AAREKLVHAVYR*VLAGTEHLETL Trigger: AAGGGTCTCTAAGTGCTCCGTGCCTGCAAGGACCAATCGGTACACCGCGTGGACCAGCTTTTCCCTGGCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236845.2 |
||
| CDS-3UTR TCA 90 bp | AAAGTGGCCCTTTGTGCCCTCCTTAGGCTTGTTGGCCCTGGTGGACTTCCTGTCGTCCAGCTCCTGCTCTaGTGCAAAGACCGTGCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: KVALCALLRLVGPGGLPVVQLLL*CKDRAR Trigger: CCTCGCACGGTCTTTGCATCAGAGCAGGAGCTGGAC...GACAGGAAGTCCACCAGGGCCAACAAGCCTAAGGAGGGCACAAAGGGCCACTTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026011.8 |
||
| CDS-3UTR TCA 90 bp | TATGCACAGCTGCCAGGGAAAAGCTGGTCCACGCGGTGTACCGATTGGTCCTTGAGCAGCTGCTCCATCTaGGTGCCAGGGGGCACAAGT | + |
|
Preference number: 4 (lower is better) Translates to: YAQLPGKSWSTRCTDWSLSSCSI*VPGGTS Trigger: ACTTGTGCCCCCTGGCACTCAGATGGAGCAGCTGCT...CAAGGACCAATCGGTACACCGCGTGGACCAGCTTTTCCCTGGCAGCTGTGCATA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026011.8 ENSMUST00000236845.2 |
||
| CDS-3UTR GCA 90 bp | CGCCTGCCTCTGCCCAGAGGGTACAGGATTAAAGGTGCTGCCCTGCATCTCTCCTTGTCCACATGTTCATaGCCACTGCAGTGGCCACCG | + |
|
Preference number: 4 (lower is better) Translates to: RLPLPRGYRIKGAALHLSLSTCS*PLQWPP Trigger: CGGTGGCCACTGCAGTGGGCATGAACATGTGGACAA...GGAGAGATGCAGGGCAGCACCTTTAATCCTGTACCCTCTGGGCAGAGGCAGGCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026011.8 |
||
| CDS-3UTR GCA 90 bp | GGTAAGAGCTGCCGCTGCTCTTCAAAAGGACCAGGGTTTGACCGCAGGCTGGCTCATGTTCATGCCCACTaGAGTGGCCACCGCAGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: GKSCRCSSKGPGFDRRLAHVHAH*SGHRSS Trigger: ACTACTGCGGTGGCCACTGCAGTGGGCATGAACATG...AGCCAGCCTGCGGTCAAACCCTGGTCCTTTTGAAGAGCAGCGGCAGCTCTTACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026011.8 |
||
| CDS-3UTR GCA 90 bp | TATGCACAGCTGCCAGGGAAAAGCTGGTCCACGCGGTGTACCGATTGGTCCTTGCATGTTCATGCCCACTaGAGTGGCCACCGCAGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: YAQLPGKSWSTRCTDWSLHVHAH*SGHRSS Trigger: ACTACTGCGGTGGCCACTGCAGTGGGCATGAACATG...CAAGGACCAATCGGTACACCGCGTGGACCAGCTTTTCCCTGGCAGCTGTGCATA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026011.8 ENSMUST00000236845.2 |
||
| CDS-3UTR GCA 90 bp | TATGCACAGCTGCCAGGGAAAAGCTGGTCCACGCGGTGTACCGATTGGTCCTTGTTGTCCACATGTTCATaGCCACTGCAGTGGCCACCG | + |
|
Preference number: 4 (lower is better) Translates to: YAQLPGKSWSTRCTDWSLLSTCS*PLQWPP Trigger: CGGTGGCCACTGCAGTGGGCATGAACATGTGGACAA...CAAGGACCAATCGGTACACCGCGTGGACCAGCTTTTCCCTGGCAGCTGTGCATA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026011.8 ENSMUST00000236845.2 |
||
| CDS-3UTR GCA 90 bp | CATGGTGATCCGAGAGATAACCACTTGTGCGATGCCCACAGCCGCAGCTCTCTGGACTGGTTCACCCACTaGCAGAAAATGACTGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: HGDPRDNHLCDAHSRSSLDWFTH*QKMTAG Trigger: GCCTGCAGTCATTTTCTGGCAGTGGGTGAACCAGTC...CAGAGAGCTGCGGCTGTGGGCATCGCACAAGTGGTTATCTCTCGGATCACCATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236845.2 |
||
| 3UTR CAA 72 bp | GAACTAAAGTGGCCCTTTGTGCCCTCCTTAGGCTTGTaGGCCCTGGTGGACTTCCTGTCTGAGGTGTCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: ELKWPFVPSLGL*ALVDFLSEVSK Trigger: CTTGGACACCTCAGACAGGAAGTCCACCAGGGCCAACAAGCCTAAGGAGGGCACAAAGGGCCACTTTAGTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026011.8 |
||
| CDS-3UTR GCA 90 bp | GGCTATCCTGGAATTAGCTCTGTAGACCAGCTGGCCTCACACTCAGAAATCAGCGCCCAGTCCAGCTCCTaGTCTGATGCAAAGACCGTG | + |
|
Preference number: 4 (lower is better) Translates to: GYPGISSVDQLASHSEISAQSSS*SDAKTV Trigger: CACGGTCTTTGCATCAGAGCAGGAGCTGGACTGGGC...GCTGATTTCTGAGTGTGAGGCCAGCTGGTCTACAGAGCTAATTCCAGGATAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026011.8 |
||
| CDS-3UTR GCA 90 bp | CCTCTGCCCAGAGGGTACAGGATTAAAGGTGCTGCCCTGCATCTCTCCTACATGGACTGGTTCACCCACTaGCAGAAAATGACTGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: PLPRGYRIKGAALHLSYMDWFTH*QKMTAG Trigger: GCCTGCAGTCATTTTCTGGCAGTGGGTGAACCAGTC...CATGTAGGAGAGATGCAGGGCAGCACCTTTAATCCTGTACCCTCTGGGCAGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026011.8 |
||
| 3UTR CAA 72 bp | GTAAGAGCTGCCGCTGCTCTTCAAAAGGACCAGGGTTaGACCGCAGGCTGGCTCACAGTAGTAACTCCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: VRAAAALQKDQG*TAGWLTVVTPV Trigger: AACTGGAGTTACTACTGTGAGCCAGCCTGCGGTCAAACCCTGGTCCTTTTGAAGAGCAGCGGCAGCTCTTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026011.8 |
||
| 3UTR CAA 72 bp | AGTGAGGCTCCACATCCCACCAGCACTCAGCAATCTTaGGTATGTGACCTAACAGGCAGAGGGAAGGAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: SEAPHPTSTQQS*VCDLTGRGKEG Trigger: GCCTTCCTTCCCTCTGCCTGTTAGGTCACATACCAAAGATTGCTGAGTGCTGGTGGGATGTGGAGCCTCACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026011.8 |
||
| CDS-3UTR TCA 90 bp | GGCTGTCCTCAAAGTTGTGTTAGTAGTTCCCATGCAAAGCCCTCCTGCTCATTAGTCCAGCTCCTGCTCTaGTGCAAAGACCGTGCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: GCPQSCVSSSHAKPSCSLVQLLL*CKDRAR Trigger: CCTCGCACGGTCTTTGCATCAGAGCAGGAGCTGGAC...TAATGAGCAGGAGGGCTTTGCATGGGAACTACTAACACAACTTTGAGGACAGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236845.2 |
||
| CDS-3UTR GCA 90 bp | GGTAAGAGCTGCCGCTGCTCTTCAAAAGGACCAGGGTTTGACCGCAGGCTGGCTCTGCCAGAAAATGACTaGAGGCATTGTCCTGTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: GKSCRCSSKGPGFDRRLALPEND*RHCPVE Trigger: TTCTACAGGACAATGCCTGCAGTCATTTTCTGGCAG...AGCCAGCCTGCGGTCAAACCCTGGTCCTTTTGAAGAGCAGCGGCAGCTCTTACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026011.8 |
||
| CDS-3UTR CCA 90 bp | AGGTGTCCAAGTGAGGCTCCACATCCCACCAGCACTCAGCAATCTTTGGTATGTGAGTCCGCACGCCACTaGCACCATAAAGAGGAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: RCPSEAPHPTSTQQSLVCESARH*HHKEEE Trigger: TTCCTCCTCTTTATGGTGCCAGTGGCGTGCGGACTC...ACATACCAAAGATTGCTGAGTGCTGGTGGGATGTGGAGCCTCACTTGGACACCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026011.8 |
||
| CDS-3UTR TCA 90 bp | CACTCAGAAATCAGCCTGCCTCTGCCTCCTGAATCTAAAGATGTGTGCCACCACTTCACACAGATGCCCTaGATGAGTTCCTGCTGTCGC | + |
|
Preference number: 4 (lower is better) Translates to: HSEISLPLPPESKDVCHHFTQMP*MSSCCR Trigger: GCGACAGCAGGAACTCATTCAGGGCATCTGTGTGAA...GTGGTGGCACACATCTTTAGATTCAGGAGGCAGAGGCAGGCTGATTTCTGAGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026011.8 |
||
| CDS-3UTR TCA 90 bp | AGGTGTCCAAGTGAGGCTCCACATCCCACCAGCACTCAGCAATCTTTGGTATGTACAGCCGCAGCTCTCTaGGAATGGCCAAGCTCATTT | + |
|
Preference number: 4 (lower is better) Translates to: RCPSEAPHPTSTQQSLVCTAAAL*EWPSSF Trigger: AAATGAGCTTGGCCATTCTCAGAGAGCTGCGGCTGT...ACATACCAAAGATTGCTGAGTGCTGGTGGGATGTGGAGCCTCACTTGGACACCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026011.8 |
||
| CDS-3UTR GCA 90 bp | ATGGTGCGTTTGAACAGAATCAGCAAATCTTGCCAGACAAAACTCATTACACACCGCGCCCCAGGAAAGTaGACTGGTCCCAGCGGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: MVRLNRISKSCQTKLITHRAPGK*TGPSGE Trigger: CTCCCCGCTGGGACCAGTGCACTTTCCTGGGGCGCG...GTGTGTAATGAGTTTTGTCTGGCAAGATTTGCTGATTCTGTTCAAACGCACCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000026011.8 |
||
| CDS-3UTR GCA 90 bp | GAAGAGTCCGCACGCCACTGGCACCATAAAGAGGAGGAAGCAGCCACACAGCAACTGCCAGAAAATGACTaGAGGCATTGTCCTGTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: EESARHWHHKEEEAATQQLPEND*RHCPVE Trigger: TTCTACAGGACAATGCCTGCAGTCATTTTCTGGCAG...TTGCTGTGTGGCTGCTTCCTCCTCTTTATGGTGCCAGTGGCGTGCGGACTCTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236845.2 |
||
| CDS-3UTR TCA 90 bp | CAGAATCAGCAAATCTTGCCAGACAAAACTCATTACACACTGACCCCAGGTAAGAGCAGCTGCTCCATCTaGGTGCCAGGGGGCACAAGT | + |
|
Preference number: 4 (lower is better) Translates to: QNQQILPDKTHYTLTPGKSSCSI*VPGGTS Trigger: ACTTGTGCCCCCTGGCACTCAGATGGAGCAGCTGCT...CTTACCTGGGGTCAGTGTGTAATGAGTTTTGTCTGGCAAGATTTGCTGATTCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000026011.8 |
||
| CDS-3UTR TCA 90 bp | GCGTGCATCACTTTGACCTTCTTCATCAGGTGTAGTCTCTCCAGCCTCTCCATGTTCACACAGATGCCCTaGATGAGTTCCCTTTGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: ACITLTFFIRCSLSSLSMFTQMP*MSSLCP Trigger: TGGACAAAGGGAACTCATTCAGGGCATCTGTGTGAA...CATGGAGAGGCTGGAGAGACTACACCTGATGAAGAAGGTCAAAGTGATGCACGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236845.2 |
||
| CDS-3UTR GCA 90 bp | GGGACAGTGAAAGTGTTCTGGATTACAGTAGTGACAACTGTAGCACTTTGTGACGCCCAGTCCAGCTCCTaGTCTGATGCAAAGACCGTG | + |
|
Preference number: 4 (lower is better) Translates to: GTVKVFWITVVTTVALCDAQSSS*SDAKTV Trigger: CACGGTCTTTGCATCAGAGCAGGAGCTGGACTGGGC...GTCACAAAGTGCTACAGTTGTCACTACTGTAATCCAGAACACTTTCACTGTCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236845.2 |
||
| CDS-3UTR CCA 90 bp | AGGTGTCCAAGTGAGGCTCCACATCCCACCAGCACTCAGCAATCTTTGGTATGTTGGCCAAGCTCATTTTaGTTCCTGTCCTTCACACAG | + |
|
Preference number: 4 (lower is better) Translates to: RCPSEAPHPTSTQQSLVCWPSSF*FLSFTQ Trigger: CTGTGTGAAGGACAGGAACCAAAATGAGCTTGGCCA...ACATACCAAAGATTGCTGAGTGCTGGTGGGATGTGGAGCCTCACTTGGACACCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026011.8 |
||
| CDS-3UTR GCA 90 bp | CTCCTACATGTTTTTAAGGCTGTAGTCCTGGTGAATTCCCACTCAGAGGTGTCCAGACGTGGGGGAAGCTaGATTCCTGTTGGTGTAGTT | + |
|
Preference number: 4 (lower is better) Translates to: LLHVFKAVVLVNSHSEVSRRGGS*IPVGVV Trigger: AACTACACCAACAGGAATGCAGCTTCCCCCACGTCT...GGACACCTCTGAGTGGGAATTCACCAGGACTACAGCCTTAAAAACATGTAGGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000026011.8 |
||
| CDS-3UTR GCA 90 bp | GGCTGTCCTCAAAGTTGTGTTAGTAGTTCCCATGCAAAGCCCTCCTGCTCATTAAGACGTGGGGGAAGCTaGATTCCTGTTGGTGTAGTT | + |
|
Preference number: 4 (lower is better) Translates to: GCPQSCVSSSHAKPSCSLRRGGS*IPVGVV Trigger: AACTACACCAACAGGAATGCAGCTTCCCCCACGTCT...TAATGAGCAGGAGGGCTTTGCATGGGAACTACTAACACAACTTTGAGGACAGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000236845.2 |
||
| CDS-3UTR TCA 90 bp | GACCTCTCAGCTAAAGGTCCCAGAAGTGGATTTGGACATGATATTAAGACAGAAGATAATTCACATTCCTaGGGGAAGAGTCCGCACGCC | + |
|
Preference number: 4 (lower is better) Translates to: DLSAKGPRSGFGHDIKTEDNSHS*GKSPHA Trigger: GGCGTGCGGACTCTTCCCTCAGGAATGTGAATTATC...TTCTGTCTTAATATCATGTCCAAATCCACTTCTGGGACCTTTAGCTGAGAGGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026011.8 |
||
| 3UTR CAA 72 bp | AGGCAGCAGGAAATCATCCCACTCACAGTGAGGGACTaGACTTGTAAAACAGAGAAGGCAATGAGAGAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: RQQEIIPLTVRD*TCKTEKAMREE Trigger: CTCTTCTCTCATTGCCTTCTCTGTTTTACAAGTCAAGTCCCTCACTGTGAGTGGGATGATTTCCTGCTGCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026011.8 |
||
| CDS-3UTR GCA 90 bp | TTCATAATGGTGCGTTTGAACAGAATCAGCAAATCTTGCCAGACAAAACTCATTGCACAAGTCCCATCCTaGTCTTCTCCACCACCGCCT | + |
|
Preference number: 4 (lower is better) Translates to: FIMVRLNRISKSCQTKLIAQVPS*SSPPPP Trigger: AGGCGGTGGTGGAGAAGAGCAGGATGGGACTTGTGC...AATGAGTTTTGTCTGGCAAGATTTGCTGATTCTGTTCAAACGCACCATTATGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026011.8 |
||
| CDS-3UTR CCA 90 bp | GCATCTCTCCTACATGTTTTTAAGGCTGTAGTCCTGGTGAATTCCCACTCAGAGCTGCTGTCGCATCATTaGGATATTGACACAGTTAGC | + |
|
Preference number: 4 (lower is better) Translates to: ASLLHVFKAVVLVNSHSELLSHH*DIDTVS Trigger: GCTAACTGTGTCAATATCCCAATGATGCGACAGCAG...CTCTGAGTGGGAATTCACCAGGACTACAGCCTTAAAAACATGTAGGAGAGATGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026011.8 |
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| CDS-3UTR TCA 90 bp | TTCATAATGGTGCGTTTGAACAGAATCAGCAAATCTTGCCAGACAAAACTCATTAGGACATCCGCCCAATaGCATTCATCTTCTCCCCAG | + |
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Preference number: 4 (lower is better) Translates to: FIMVRLNRISKSCQTKLIRTSAQ*HSSSPQ Trigger: CTGGGGAGAAGATGAATGTCATTGGGCGGATGTCCT...AATGAGTTTTGTCTGGCAAGATTTGCTGATTCTGTTCAAACGCACCATTATGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026011.8 |
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| 3UTR CAA 72 bp | ATTCATAATGGTGCGTTTGAACAGAATCAGCAAATCTaGCCAGACAAAACTCATTACACACTGACCCCAGGT | + |
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Preference number: 4 (lower is better) Translates to: IHNGAFEQNQQI*PDKTHYTLTPG Trigger: ACCTGGGGTCAGTGTGTAATGAGTTTTGTCTGGCAAGATTTGCTGATTCTGTTCAAACGCACCATTATGAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026011.8 |
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| CDS-3UTR CAA 90 bp | GGGGCGTGCATCACTTTGACCTTCTTCATCAGGTGTAGTCTCTCCAGCCTCTCCTTCTCCACCACCGCCTaGGCCCAGTCCAGCTCCTGC | + |
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Preference number: 5 (lower is better) Translates to: GACITLTFFIRCSLSSLSFSTTA*AQSSSC Trigger: GCAGGAGCTGGACTGGGCCAAGGCGGTGGTGGAGAA...GGAGAGGCTGGAGAGACTACACCTGATGAAGAAGGTCAAAGTGATGCACGCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236845.2 |
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| CDS GCA 90 bp | GCCCACCAAGGGTGGGGCTCTCTTTGTCCACATGTTCATGCCCACTaGAGTGGCCACCGCAGTAGTAGTAGCTGTGAAGTAGGAGAGGGC | + |
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Preference number: 5 (lower is better) Translates to: AHQGWGSLCPHVHAH*SGHRSSSSCEVGEG Trigger: GCCCTCTCCTACTTCACAGCTACTACTACTGCGGTGGCCACTGCAGTGGGCATGAACATGTGGACAAAGAGAGCCCCACCCTTGGTGGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026011.8 |
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| CDS GCA 90 bp | GATCATGCCAGGGGCTGCCATGGTGATCCGAGAGATAACCACTTGTaGGATGCCCACAGCCGCAGCTCTCTGAGAATGGCCAAGCTCATT | + |
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Preference number: 5 (lower is better) Translates to: DHARGCHGDPRDNHL*DAHSRSSLRMAKLI Trigger: AATGAGCTTGGCCATTCTCAGAGAGCTGCGGCTGTGGGCATCGCACAAGTGGTTATCTCTCGGATCACCATGGCAGCCCCTGGCATGATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026011.8 |
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| CDS-3UTR CAA 90 bp | ACTCAGAAATCAGCCTGCCTCTGCCTCCTGAATCTAAAGATGTGTGCCACCACTTTCTCCACCACCGCCTaGGCCCAGTCCAGCTCCTGC | + |
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Preference number: 5 (lower is better) Translates to: TQKSACLCLLNLKMCATTFSTTA*AQSSSC Trigger: GCAGGAGCTGGACTGGGCCAAGGCGGTGGTGGAGAA...AGTGGTGGCACACATCTTTAGATTCAGGAGGCAGAGGCAGGCTGATTTCTGAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026011.8 |
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| CDS-3UTR CAA 90 bp | GCCGCTGCTCTTCAAAAGGACCAGGGTTTGACCGCAGGCTGGCTCACAGTAGTAAGGGTGGGGCTCTCTTaGTCCACATGTTCATGCCCA | + |
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Preference number: 5 (lower is better) Translates to: AAALQKDQGLTAGWLTVVRVGLS*STCSCP Trigger: TGGGCATGAACATGTGGACAAAGAGAGCCCCACCCT...TACTACTGTGAGCCAGCCTGCGGTCAAACCCTGGTCCTTTTGAAGAGCAGCGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026011.8 |
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| CDS-3UTR CAA 90 bp | AAAGTGGCCCTTTGTGCCCTCCTTAGGCTTGTTGGCCCTGGTGGACTTCCTGTCCGCATCATTGGGATATaGACACAGTTAGCGGCAGCC | + |
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Preference number: 5 (lower is better) Translates to: KVALCALLRLVGPGGLPVRIIGI*TQLAAA Trigger: GGCTGCCGCTAACTGTGTCAATATCCCAATGATGCG...GACAGGAAGTCCACCAGGGCCAACAAGCCTAAGGAGGGCACAAAGGGCCACTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026011.8 |
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| CDS CCA 90 bp | GTCCTTCACACAGATGCCCTGAATGAGTTCCTGCTGTCGCATCATTaGGATATTGACACAGTTAGCGGCAGCCACAGCGGCAAAAGGCAC | + |
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Preference number: 5 (lower is better) Translates to: VLHTDALNEFLLSHH*DIDTVSGSHSGKRH Trigger: GTGCCTTTTGCCGCTGTGGCTGCCGCTAACTGTGTCAATATCCCAATGATGCGACAGCAGGAACTCATTCAGGGCATCTGTGTGAAGGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026011.8 |
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| CDS-3UTR CAA 90 bp | GAGGAAGAGATTAGTGTATCCTCTGTCCTGACTGGACAAGGATCACTCGATTTCTCTCCATACTTGGCCTaGATGGTGTCCCGTAGCTCT | + |
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Preference number: 5 (lower is better) Translates to: EEEISVSSVLTGQGSLDFSPYLA*MVSRSS Trigger: AGAGCTACGGGACACCATCAAGGCCAAGTATGGAGA...GAAATCGAGTGATCCTTGTCCAGTCAGGACAGAGGATACACTAATCTCTTCCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026011.8 |
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| CDS-3UTR CAA 90 bp | GAGGAAGAGATTAGTGTATCCTCTGTCCTGACTGGACAAGGATCACTCGATTTCACTTGTTCTCCATACTaGGCCTTGATGGTGTCCCGT | + |
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Preference number: 5 (lower is better) Translates to: EEEISVSSVLTGQGSLDFTCSPY*ALMVSR Trigger: ACGGGACACCATCAAGGCCAAGTATGGAGAACAAGT...GAAATCGAGTGATCCTTGTCCAGTCAGGACAGAGGATACACTAATCTCTTCCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026011.8 |
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| CDS-3UTR CAA 90 bp | GACCTCTCAGCTAAAGGTCCCAGAAGTGGATTTGGACATGATATTAAGACAGAAGGGGCGTGCATCACTTaGACCTTCTTCATCAGGTGT | + |
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Preference number: 5 (lower is better) Translates to: DLSAKGPRSGFGHDIKTEGACIT*TFFIRC Trigger: ACACCTGATGAAGAAGGTCAAAGTGATGCACGCCCC...TTCTGTCTTAATATCATGTCCAAATCCACTTCTGGGACCTTTAGCTGAGAGGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026011.8 |
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| CDS-3UTR CAA 90 bp | GGGACAGTGAAAGTGTTCTGGATTACAGTAGTGACAACTGTAGCACTTTGTGACCTGAATGAGTTCCCTTaGTCCACATGTTCATGCCCA | + |
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Preference number: 5 (lower is better) Translates to: GTVKVFWITVVTTVALCDLNEFP*STCSCP Trigger: TGGGCATGAACATGTGGACAAAGGGAACTCATTCAG...GTCACAAAGTGCTACAGTTGTCACTACTGTAATCCAGAACACTTTCACTGTCCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236845.2 |
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| CDS-3UTR CAA 90 bp | GACCTCTCAGCTAAAGGTCCCAGAAGTGGATTTGGACATGATATTAAGACAGAAGTAGACAAAGAGGACTaGTTCTCCATACTTGGCCTT | + |
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Preference number: 5 (lower is better) Translates to: DLSAKGPRSGFGHDIKTEVDKED*FSILGL Trigger: AAGGCCAAGTATGGAGAACAAGTCCTCTTTGTCTAC...TTCTGTCTTAATATCATGTCCAAATCCACTTCTGGGACCTTTAGCTGAGAGGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026011.8 |
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| CDS CAA 90 bp | GTGCCAGGGGGCACAAGTCCCATCCTGCTCTTCTCCACCACCGCCTaGGCCCAGTCCAGCTCCTGCTCTGATGCAAAGACCGTGCGAGGA | + |
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Preference number: 6 (lower is better) Translates to: VPGGTSPILLFSTTA*AQSSSCSDAKTVRG Trigger: TCCTCGCACGGTCTTTGCATCAGAGCAGGAGCTGGACTGGGCCAAGGCGGTGGTGGAGAAGAGCAGGATGGGACTTGTGCCCCCTGGCAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026011.8 ENSMUST00000236845.2 |
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| CDS GCA 72 bp | CTCTTCTCCACCACCGCCTTGGCCCAGTCCAGCTCCTaGTCTGATGCAAAGACCGTGCGAGGATCTGTGATG | + |
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Preference number: 6 (lower is better) Translates to: LFSTTALAQSSS*SDAKTVRGSVM Trigger: CATCACAGATCCTCGCACGGTCTTTGCATCAGAGCAGGAGCTGGACTGGGCCAAGGCGGTGGTGGAGAAGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026011.8 ENSMUST00000236845.2 |
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| CDS CAA 90 bp | CAGGATCATGCCAGGGGCTGCCATGGTGATCCGAGAGATAACCACTaGTGCGATGCCCACAGCCGCAGCTCTCTGAGAATGGCCAAGCTC | + |
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Preference number: 6 (lower is better) Translates to: QDHARGCHGDPRDNH*CDAHSRSSLRMAKL Trigger: GAGCTTGGCCATTCTCAGAGAGCTGCGGCTGTGGGCATCGCACAAGTGGTTATCTCTCGGATCACCATGGCAGCCCCTGGCATGATCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026011.8 |
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| CDS TCA 72 bp | CTCCACCACCGCCTTGGCCCAGTCCAGCTCCTGCTCTaGTGCAAAGACCGTGCGAGGATCTGTGATGTTAAA | + |
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Preference number: 6 (lower is better) Translates to: LHHRLGPVQLLL*CKDRARICDVK Trigger: TTTAACATCACAGATCCTCGCACGGTCTTTGCATCAGAGCAGGAGCTGGACTGGGCCAAGGCGGTGGTGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026011.8 ENSMUST00000236845.2 |
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| CDS GCA 72 bp | GGGTGGGGCTCTCTTTGTCCACATGTTCATGCCCACTaGAGTGGCCACCGCAGTAGTAGTAGCTGTGAAGTA | + |
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Preference number: 6 (lower is better) Translates to: GWGSLCPHVHAH*SGHRSSSSCEV Trigger: TACTTCACAGCTACTACTACTGCGGTGGCCACTGCAGTGGGCATGAACATGTGGACAAAGAGAGCCCCACCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026011.8 |
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| CDS CCA 72 bp | AGCATGAAGCCCGTGATGAGCATGCCACCAGGGACCTaGAAGGACATCCGCCCAATGACATTCATCTTCTCC | + |
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Preference number: 6 (lower is better) Translates to: SMKPVMSMPPGT*KDIRPMTFIFS Trigger: GGAGAAGATGAATGTCATTGGGCGGATGTCCTTCCAGGTCCCTGGTGGCATGCTCATCACGGGCTTCATGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026011.8 ENSMUST00000236845.2 |
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| CDS CAA 90 bp | TGCGATGCCCACAGCCGCAGCTCTCTGAGAATGGCCAAGCTCATTTaGGTTCCTGTCCTTCACACAGATGCCCTGAATGAGTTCCTGCTG | + |
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Preference number: 6 (lower is better) Translates to: CDAHSRSSLRMAKLI*VPVLHTDALNEFLL Trigger: CAGCAGGAACTCATTCAGGGCATCTGTGTGAAGGACAGGAACCAAAATGAGCTTGGCCATTCTCAGAGAGCTGCGGCTGTGGGCATCGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026011.8 |
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| CDS GCA 72 bp | GGAGAGGGCCATCTGCCTGACAGACGTGGGGGAAGCTaGATTCCTGTTGGTGTAGTTGACCAAGGCATTAAA | + |
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Preference number: 6 (lower is better) Translates to: GEGHLPDRRGGS*IPVGVVDQGIK Trigger: TTTAATGCCTTGGTCAACTACACCAACAGGAATGCAGCTTCCCCCACGTCTGTCAGGCAGATGGCCCTCTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026011.8 ENSMUST00000236845.2 |
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| CDS CCA 72 bp | ACAGATGCCCTGAATGAGTTCCTGCTGTCGCATCATTaGGATATTGACACAGTTAGCGGCAGCCACAGCGGC | + |
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Preference number: 6 (lower is better) Translates to: TDALNEFLLSHH*DIDTVSGSHSG Trigger: GCCGCTGTGGCTGCCGCTAACTGTGTCAATATCCCAATGATGCGACAGCAGGAACTCATTCAGGGCATCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026011.8 |
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