Pregenerated sensors for SFTPB (Mus musculus)
Ensembl gene IDs: ENSMUSG00000056370Ensembl transcript IDs: ENSMUST00000182014.10, ENSMUST00000183018.8
Found 131 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTCAGTCCCTGTGGGCTGTGGGAGCTATGGGAGCTGGCTTGGCTCTaGTGGAGGCGAAGGCCCGAAGCCCCTTCTGAAGGCTTCCAGAGG | + |
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Preference number: 1 (lower is better) Translates to: LSPCGLWELWELAWL*WRRRPEAPSEGFQR Trigger: CCTCTGGAAGCCTTCAGAAGGGGCTTCGGGCCTTCGCCTCCACCAGAGCCAAGCCAGCTCCCATAGCTCCCACAGCCCACAGGGACTGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000182014.10 ENSMUST00000183018.8 |
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| 3UTR CCA 90 bp | GTTCTTCTCAGTCCCTGTGGGCTGTGGGAGCTATGGGAGCTGGCTTaGCTCTGGTGGAGGCGAAGGCCCGAAGCCCCTTCTGAAGGCTTC | + |
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Preference number: 1 (lower is better) Translates to: VLLSPCGLWELWELA*LWWRRRPEAPSEGF Trigger: GAAGCCTTCAGAAGGGGCTTCGGGCCTTCGCCTCCACCAGAGCCAAGCCAGCTCCCATAGCTCCCACAGCCCACAGGGACTGAGAAGAAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000182014.10 ENSMUST00000183018.8 |
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| 3UTR CCA 90 bp | TACCCGATGTCTTCTTGGAGCCACAACAGTTCTTCTCAGTCCCTGTaGGCTGTGGGAGCTATGGGAGCTGGCTTGGCTCTGGTGGAGGCG | + |
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Preference number: 1 (lower is better) Translates to: YPMSSWSHNSSSQSL*AVGAMGAGLALVEA Trigger: CGCCTCCACCAGAGCCAAGCCAGCTCCCATAGCTCCCACAGCCCACAGGGACTGAGAAGAACTGTTGTGGCTCCAAGAAGACATCGGGTA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000182014.10 ENSMUST00000183018.8 |
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| 3UTR-3UTR TCA 90 bp | AGTCCCTGTGGGCTGTGGGAGCTATGGGAGCTGGCTTGGCTCTGGTGGAGGCGAGCTGAGGGTGCAGGCTaGGGCTTGTCCTCTGGAGCA | + |
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Preference number: 2 (lower is better) Translates to: SPCGLWELWELAWLWWRRAEGAG*GLSSGA Trigger: TGCTCCAGAGGACAAGCCTCAGCCTGCACCCTCAGC...TCGCCTCCACCAGAGCCAAGCCAGCTCCCATAGCTCCCACAGCCCACAGGGACT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000182014.10 ENSMUST00000183018.8 |
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| 3UTR-3UTR CCA 90 bp | CCCTGTGGGCTGTGGGAGCTATGGGAGCTGGCTTGGCTCTGGTGGAGGCGAAGGCAGAAACCACTGTGGTaGTGGTGGTGGTGGTGGTGG | + |
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Preference number: 2 (lower is better) Translates to: PCGLWELWELAWLWWRRRQKPLW*WWWWWW Trigger: CCACCACCACCACCACCACCACCACAGTGGTTTCTG...CCTTCGCCTCCACCAGAGCCAAGCCAGCTCCCATAGCTCCCACAGCCCACAGGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000182014.10 ENSMUST00000183018.8 |
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| 3UTR-3UTR TCA 90 bp | GGAGCCACAACAGTTCTTCTCAGTCCCTGTGGGCTGTGGGAGCTATGGGAGCTGGCTGAGGGTGCAGGCTaGGGCTTGTCCTCTGGAGCA | + |
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Preference number: 2 (lower is better) Translates to: GATTVLLSPCGLWELWELAEGAG*GLSSGA Trigger: TGCTCCAGAGGACAAGCCTCAGCCTGCACCCTCAGC...CAGCTCCCATAGCTCCCACAGCCCACAGGGACTGAGAAGAACTGTTGTGGCTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000182014.10 ENSMUST00000183018.8 |
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| 3UTR-3UTR TCA 90 bp | GAGCCAGAAACCACTGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGCTGGGACATACAGACTaGCACAGGGCTGAGGGTGCA | + |
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Preference number: 2 (lower is better) Translates to: EPETTVVVVVVVVVVVVVLGHTD*HRAEGA Trigger: TGCACCCTCAGCCCTGTGTCAGTCTGTATGTCCCAG...CACCACCACCACCACCACCACCACCACCACCACCACCACAGTGGTTTCTGGCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000182014.10 ENSMUST00000183018.8 |
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| 3UTR-3UTR CCA 90 bp | TTGGAGCCACAACAGTTCTTCTCAGTCCCTGTGGGCTGTGGGAGCTATGGGAGCCAGAAACCACTGTGGTaGTGGTGGTGGTGGTGGTGG | + |
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Preference number: 2 (lower is better) Translates to: LEPQQFFSVPVGCGSYGSQKPLW*WWWWWW Trigger: CCACCACCACCACCACCACCACCACAGTGGTTTCTG...GCTCCCATAGCTCCCACAGCCCACAGGGACTGAGAAGAACTGTTGTGGCTCCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000182014.10 ENSMUST00000183018.8 |
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| 3UTR CCA 72 bp | GGGAGCCAGAAACCACTGTGGTGGTGGTGGTGGTGGTaGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGG | + |
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Preference number: 3 (lower is better) Translates to: GSQKPLWWWWWW*WWWWWWWWWWW Trigger: CCACCACCACCACCACCACCACCACCACCACCACCACCACCACCACCACCACCACAGTGGTTTCTGGCTCCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000182014.10 ENSMUST00000183018.8 |
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| 3UTR CCA 72 bp | TGTGGGCTGTGGGAGCTATGGGAGCTGGCTTGGCTCTaGTGGAGGCGAAGGCCCGAAGCCCCTTCTGAAGGC | + |
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Preference number: 3 (lower is better) Translates to: CGLWELWELAWL*WRRRPEAPSEG Trigger: GCCTTCAGAAGGGGCTTCGGGCCTTCGCCTCCACCAGAGCCAAGCCAGCTCCCATAGCTCCCACAGCCCACA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000182014.10 ENSMUST00000183018.8 |
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| 3UTR CCA 72 bp | TTCTCAGTCCCTGTGGGCTGTGGGAGCTATGGGAGCTaGCTTGGCTCTGGTGGAGGCGAAGGCCCGAAGCCC | + |
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Preference number: 3 (lower is better) Translates to: FSVPVGCGSYGS*LGSGGGEGPKP Trigger: GGGCTTCGGGCCTTCGCCTCCACCAGAGCCAAGCCAGCTCCCATAGCTCCCACAGCCCACAGGGACTGAGAA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000182014.10 ENSMUST00000183018.8 |
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| 3UTR CCA 72 bp | CAGAAACCACTGTGGTGGTGGTGGTGGTGGTGGTGGTaGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGG | + |
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Preference number: 3 (lower is better) Translates to: QKPLWWWWWWWW*WWWWWWWWWWW Trigger: CCACCACCACCACCACCACCACCACCACCACCACCACCACCACCACCACCACCACCACCACAGTGGTTTCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000182014.10 ENSMUST00000183018.8 |
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| 3UTR CCA 72 bp | AGCCAGAAACCACTGTGGTGGTGGTGGTGGTGGTGGTaGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGG | + |
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Preference number: 3 (lower is better) Translates to: SQKPLWWWWWWW*WWWWWWWWWWW Trigger: CCACCACCACCACCACCACCACCACCACCACCACCACCACCACCACCACCACCACCACAGTGGTTTCTGGCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000182014.10 ENSMUST00000183018.8 |
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| 3UTR CCA 72 bp | GGAGCCACAACAGTTCTTCTCAGTCCCTGTGGGCTGTaGGAGCTATGGGAGCTGGCTTGGCTCTGGTGGAGG | + |
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Preference number: 3 (lower is better) Translates to: GATTVLLSPCGL*ELWELAWLWWR Trigger: CCTCCACCAGAGCCAAGCCAGCTCCCATAGCTCCCACAGCCCACAGGGACTGAGAAGAACTGTTGTGGCTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000182014.10 ENSMUST00000183018.8 |
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| 3UTR CCA 72 bp | TCTTCTTGGAGCCACAACAGTTCTTCTCAGTCCCTGTaGGCTGTGGGAGCTATGGGAGCTGGCTTGGCTCTG | + |
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Preference number: 3 (lower is better) Translates to: SSWSHNSSSQSL*AVGAMGAGLAL Trigger: CAGAGCCAAGCCAGCTCCCATAGCTCCCACAGCCCACAGGGACTGAGAAGAACTGTTGTGGCTCCAAGAAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000182014.10 ENSMUST00000183018.8 |
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| 3UTR CCA 72 bp | TTTGGATTTCATAGAAATGTTAGCAAGGGGTTGGTGTaGCTATACCCAGCTTCTACCCGATGTCTTCTTGGA | + |
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Preference number: 3 (lower is better) Translates to: FGFHRNVSKGLV*LYPASTRCLLG Trigger: TCCAAGAAGACATCGGGTAGAAGCTGGGTATAGCCACACCAACCCCTTGCTAACATTTCTATGAAATCCAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000182014.10 ENSMUST00000183018.8 |
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| 3UTR CCA 72 bp | TCAAGTTTGGATTTCATAGAAATGTTAGCAAGGGGTTaGTGTGGCTATACCCAGCTTCTACCCGATGTCTTC | + |
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Preference number: 3 (lower is better) Translates to: SSLDFIEMLARG*CGYTQLLPDVF Trigger: GAAGACATCGGGTAGAAGCTGGGTATAGCCACACCAACCCCTTGCTAACATTTCTATGAAATCCAAACTTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000182014.10 ENSMUST00000183018.8 |
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| CDS-3UTR GCA 90 bp | CGAAGGCCCGAAGCCCCTTCTGAAGGCTTCCAGAGGACGTGGGCCTGCCGCCCCGTGAGGCCCAGGCCTTaGCAAGAGGGCTCCTGGCAG | + |
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Preference number: 4 (lower is better) Translates to: RRPEAPSEGFQRTWACRPVRPRP*QEGSWQ Trigger: CTGCCAGGAGCCCTCTTGGCAAGGCCTGGGCCTCAC...GGGGCGGCAGGCCCACGTCCTCTGGAAGCCTTCAGAAGGGGCTTCGGGCCTTCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000182014.10 ENSMUST00000183018.8 |
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| CDS-3UTR CCA 90 bp | CGAAGGCCCGAAGCCCCTTCTGAAGGCTTCCAGAGGACGTGGGCCTGCCGCCCCACCAGGGGTACCACGTaGCACACCTGGGACACAGCC | + |
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Preference number: 4 (lower is better) Translates to: RRPEAPSEGFQRTWACRPTRGTT*HTWDTA Trigger: GGCTGTGTCCCAGGTGTGCCACGTGGTACCCCTGGT...GGGGCGGCAGGCCCACGTCCTCTGGAAGCCTTCAGAAGGGGCTTCGGGCCTTCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000182014.10 |
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| CDS-3UTR CCA 90 bp | GGAGGCGAAGGCCCGAAGCCCCTTCTGAAGGCTTCCAGAGGACGTGGGCCTGCCGCCTGGCAGGTGATGTaGGCATCCTGGCTCCTAGGC | + |
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Preference number: 4 (lower is better) Translates to: GGEGPKPLLKASRGRGPAAWQVM*ASWLLG Trigger: GCCTAGGAGCCAGGATGCCCACATCACCTGCCAGGC...GGCAGGCCCACGTCCTCTGGAAGCCTTCAGAAGGGGCTTCGGGCCTTCGCCTCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000182014.10 ENSMUST00000183018.8 |
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| CDS-3UTR GCA 90 bp | GGCGAAGGCCCGAAGCCCCTTCTGAAGGCTTCCAGAGGACGTGGGCCTGCCGCCGGCTCTGCACTGCACTaGATGCTCCAGGCTTTGGCA | + |
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Preference number: 4 (lower is better) Translates to: GEGPKPLLKASRGRGPAAGSALH*MLQALA Trigger: TGCCAAAGCCTGGAGCATGCAGTGCAGTGCAGAGCC...GGCGGCAGGCCCACGTCCTCTGGAAGCCTTCAGAAGGGGCTTCGGGCCTTCGCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000182014.10 ENSMUST00000183018.8 |
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| CDS-3UTR CCA 90 bp | GGGCTGAGGGTGCAGGCTGAGGCTTGTCCTCTGGAGCAGGCTGGAGACCGCGTTGTGATGTGGGCATCCTaGCTCCTAGGCACCAGGGCC | + |
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Preference number: 4 (lower is better) Translates to: GLRVQAEACPLEQAGDRVVMWAS*LLGTRA Trigger: GGCCCTGGTGCCTAGGAGCCAGGATGCCCACATCAC...AACGCGGTCTCCAGCCTGCTCCAGAGGACAAGCCTCAGCCTGCACCCTCAGCCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183018.8 |
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| CDS-3UTR GCA 90 bp | GGGGAGCCAGAAACCACTGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGACTTCCTGCAGGCAGTaGCCCAGGGCTCTGCACTGC | + |
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Preference number: 4 (lower is better) Translates to: GEPETTVVVVVVVVVVVVTSCRQ*PRALHC Trigger: GCAGTGCAGAGCCCTGGGGCACTGCCTGCAGGAAGT...CACCACCACCACCACCACCACCACCACCACCACCACAGTGGTTTCTGGCTCCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000182014.10 ENSMUST00000183018.8 |
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| CDS-3UTR CCA 90 bp | GGGGAGCCAGAAACCACTGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGCCTGGCAGGTGATGTaGGCATCCTGGCTCCTAGGC | + |
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Preference number: 4 (lower is better) Translates to: GEPETTVVVVVVVVVVVVAWQVM*ASWLLG Trigger: GCCTAGGAGCCAGGATGCCCACATCACCTGCCAGGC...CACCACCACCACCACCACCACCACCACCACCACCACAGTGGTTTCTGGCTCCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000182014.10 ENSMUST00000183018.8 |
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| CDS-3UTR GCA 90 bp | CCTGTGGGCTGTGGGAGCTATGGGAGCTGGCTTGGCTCTGGTGGAGGCGAAGGCCTGCACTGCACTGCATaGTCCAGGCTTTGGCACCAG | + |
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Preference number: 4 (lower is better) Translates to: PVGCGSYGSWLGSGGGEGLHCTA*SRLWHQ Trigger: CTGGTGCCAAAGCCTGGAGCATGCAGTGCAGTGCAG...GCCTTCGCCTCCACCAGAGCCAAGCCAGCTCCCATAGCTCCCACAGCCCACAGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000182014.10 ENSMUST00000183018.8 |
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| CDS-3UTR GCA 90 bp | CAGACTGACACAGGGCTGAGGGTGCAGGCTGAGGCTTGTCCTCTGGAGCAGGCTAGTGCCCCAGGGCTCTaGACTGCACTGCATGCTCCA | + |
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Preference number: 4 (lower is better) Translates to: QTDTGLRVQAEACPLEQASAPGL*TALHAP Trigger: TGGAGCATGCAGTGCAGTGCAGAGCCCTGGGGCACT...AGCCTGCTCCAGAGGACAAGCCTCAGCCTGCACCCTCAGCCCTGTGTCAGTCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000182014.10 ENSMUST00000183018.8 |
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| CDS-3UTR GCA 90 bp | AGTCCCTGTGGGCTGTGGGAGCTATGGGAGCTGGCTTGGCTCTGGTGGAGGCGAGCAGGCCTGGTGCATTaGCTGTGGCATAGCCTGTTC | + |
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Preference number: 4 (lower is better) Translates to: SPCGLWELWELAWLWWRRAGLVH*LWHSLF Trigger: GAACAGGCTATGCCACAGGCAATGCACCAGGCCTGC...TCGCCTCCACCAGAGCCAAGCCAGCTCCCATAGCTCCCACAGCCCACAGGGACT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000182014.10 ENSMUST00000183018.8 |
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| CDS-3UTR CCA 90 bp | GTCCCTGTGGGCTGTGGGAGCTATGGGAGCTGGCTTGGCTCTGGTGGAGGCGAACGTGATAGCTGCACCTaGGCAGCAGAGGGTAGGAAG | + |
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Preference number: 4 (lower is better) Translates to: VPVGCGSYGSWLGSGGGERDSCT*AAEGRK Trigger: CTTCCTACCCTCTGCTGCCCAGGTGCAGCTATCACG...TTCGCCTCCACCAGAGCCAAGCCAGCTCCCATAGCTCCCACAGCCCACAGGGAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000182014.10 ENSMUST00000183018.8 |
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| CDS-3UTR TCA 90 bp | GGGGAGCCAGAAACCACTGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGCTTTGGCACCAGAATTaGGGGCCTTGTGCACACTCC | + |
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Preference number: 4 (lower is better) Translates to: GEPETTVVVVVVVVVVVVLWHQN*GPCAHS Trigger: GGAGTGTGCACAAGGCCCTCAATTCTGGTGCCAAAG...CACCACCACCACCACCACCACCACCACCACCACCACAGTGGTTTCTGGCTCCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000182014.10 ENSMUST00000183018.8 |
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| CDS-3UTR GCA 90 bp | TGGCTTGGCTCTGGTGGAGGCGAAGGCCCGAAGCCCCTTCTGAAGGCTTCCAGAGGCTCTGCACTGCACTaGATGCTCCAGGCTTTGGCA | + |
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Preference number: 4 (lower is better) Translates to: WLGSGGGEGPKPLLKASRGSALH*MLQALA Trigger: TGCCAAAGCCTGGAGCATGCAGTGCAGTGCAGAGCC...TCTGGAAGCCTTCAGAAGGGGCTTCGGGCCTTCGCCTCCACCAGAGCCAAGCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000182014.10 ENSMUST00000183018.8 |
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| CDS-3UTR GCA 90 bp | AGTCCCTGTGGGCTGTGGGAGCTATGGGAGCTGGCTTGGCTCTGGTGGAGGCGATCATTAGCTCCTGCATaGCCCCAGACTTCCTGCAGG | + |
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Preference number: 4 (lower is better) Translates to: SPCGLWELWELAWLWWRRSLAPA*PQTSCR Trigger: CCTGCAGGAAGTCTGGGGGCATGCAGGAGCTAATGA...TCGCCTCCACCAGAGCCAAGCCAGCTCCCATAGCTCCCACAGCCCACAGGGACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000182014.10 ENSMUST00000183018.8 |
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| CDS-3UTR GCA 90 bp | GGGGAGCCAGAAACCACTGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGCAGGTCATTAGCTCCTaGATGCCCCCAGACTTCCTG | + |
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Preference number: 4 (lower is better) Translates to: GEPETTVVVVVVVVVVVVQVISS*MPPDFL Trigger: CAGGAAGTCTGGGGGCATGCAGGAGCTAATGACCTG...CACCACCACCACCACCACCACCACCACCACCACCACAGTGGTTTCTGGCTCCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000182014.10 ENSMUST00000183018.8 |
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| CDS-3UTR CCA 90 bp | GAGCCACAACAGTTCTTCTCAGTCCCTGTGGGCTGTGGGAGCTATGGGAGCTGGACCACGTGGCACACCTaGGACACAGCCACAGCCAGC | + |
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Preference number: 4 (lower is better) Translates to: EPQQFFSVPVGCGSYGSWTTWHT*DTATAS Trigger: GCTGGCTGTGGCTGTGTCCCAGGTGTGCCACGTGGT...CCAGCTCCCATAGCTCCCACAGCCCACAGGGACTGAGAAGAACTGTTGTGGCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182014.10 |
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| CDS-3UTR CCA 90 bp | TTGGAGCCACAACAGTTCTTCTCAGTCCCTGTGGGCTGTGGGAGCTATGGGAGCGTGATGTGGGCATCCTaGCTCCTAGGCACCAGGGCC | + |
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Preference number: 4 (lower is better) Translates to: LEPQQFFSVPVGCGSYGSVMWAS*LLGTRA Trigger: GGCCCTGGTGCCTAGGAGCCAGGATGCCCACATCAC...GCTCCCATAGCTCCCACAGCCCACAGGGACTGAGAAGAACTGTTGTGGCTCCAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000182014.10 ENSMUST00000183018.8 |
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| CDS-3UTR TCA 90 bp | GAGCCAGAAACCACTGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGTTGGGGATCACGGCTTaGACCCGCTTGATCAGAGTT | + |
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Preference number: 4 (lower is better) Translates to: EPETTVVVVVVVVVVVVVLGITA*TRLIRV Trigger: AACTCTGATCAAGCGGGTTCAAGCCGTGATCCCCAA...CACCACCACCACCACCACCACCACCACCACCACCACCACAGTGGTTTCTGGCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000182014.10 ENSMUST00000183018.8 |
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| CDS-3UTR GCA 90 bp | TGGAGGCGAAGGCCCGAAGCCCCTTCTGAAGGCTTCCAGAGGACGTGGGCCTGCCAGGAACTTCCGGATTaGTTCCTGGAAAGCATCTTC | + |
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Preference number: 4 (lower is better) Translates to: WRRRPEAPSEGFQRTWACQELPD*FLESIF Trigger: GAAGATGCTTTCCAGGAAGCAATCCGGAAGTTCCTG...GCAGGCCCACGTCCTCTGGAAGCCTTCAGAAGGGGCTTCGGGCCTTCGCCTCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000182014.10 ENSMUST00000183018.8 |
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| CDS-3UTR GCA 90 bp | CTTGGAGCCACAACAGTTCTTCTCAGTCCCTGTGGGCTGTGGGAGCTATGGGAGCGAAGGCAGGCCTGGTaGATTGCCTGTGGCATAGCC | + |
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Preference number: 4 (lower is better) Translates to: LGATTVLLSPCGLWELWERRQAW*IACGIA Trigger: GGCTATGCCACAGGCAATGCACCAGGCCTGCCTTCG...CTCCCATAGCTCCCACAGCCCACAGGGACTGAGAAGAACTGTTGTGGCTCCAAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000182014.10 ENSMUST00000183018.8 |
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| CDS-3UTR GCA 90 bp | GGGGTTGGTGTGGCTATACCCAGCTTCTACCCGATGTCTTCTTGGAGCCACAACCCCAGGGCTCTGCACTaGACTGCATGCTCCAGGCTT | + |
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Preference number: 4 (lower is better) Translates to: GVGVAIPSFYPMSSWSHNPRALH*TACSRL Trigger: AAGCCTGGAGCATGCAGTGCAGTGCAGAGCCCTGGG...GTTGTGGCTCCAAGAAGACATCGGGTAGAAGCTGGGTATAGCCACACCAACCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000182014.10 ENSMUST00000183018.8 |
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| CDS-3UTR GCA 90 bp | ATGTCTTCTTGGAGCCACAACAGTTCTTCTCAGTCCCTGTGGGCTGTGGGAGCTACTTCCTGCAGGCAGTaGCCCAGGGCTCTGCACTGC | + |
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Preference number: 4 (lower is better) Translates to: MSSWSHNSSSQSLWAVGATSCRQ*PRALHC Trigger: GCAGTGCAGAGCCCTGGGGCACTGCCTGCAGGAAGT...AGCTCCCACAGCCCACAGGGACTGAGAAGAACTGTTGTGGCTCCAAGAAGACAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000182014.10 ENSMUST00000183018.8 |
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| CDS-3UTR GCA 90 bp | GGAGCCACAACAGTTCTTCTCAGTCCCTGTGGGCTGTGGGAGCTATGGGAGCTGTCATTAGCTCCTGCATaGCCCCAGACTTCCTGCAGG | + |
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Preference number: 4 (lower is better) Translates to: GATTVLLSPCGLWELWELSLAPA*PQTSCR Trigger: CCTGCAGGAAGTCTGGGGGCATGCAGGAGCTAATGA...CAGCTCCCATAGCTCCCACAGCCCACAGGGACTGAGAAGAACTGTTGTGGCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000182014.10 ENSMUST00000183018.8 |
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| CDS-3UTR GCA 90 bp | TTCTACCCGATGTCTTCTTGGAGCCACAACAGTTCTTCTCAGTCCCTGTGGGCTGTGAGGCCCAGGCCTTaGCAAGAGGGCTCCTGGCAG | + |
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Preference number: 4 (lower is better) Translates to: FYPMSSWSHNSSSQSLWAVRPRP*QEGSWQ Trigger: CTGCCAGGAGCCCTCTTGGCAAGGCCTGGGCCTCAC...AGCCCACAGGGACTGAGAAGAACTGTTGTGGCTCCAAGAAGACATCGGGTAGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000182014.10 ENSMUST00000183018.8 |
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| CDS-3UTR GCA 90 bp | TTCTACCCGATGTCTTCTTGGAGCCACAACAGTTCTTCTCAGTCCCTGTGGGCTGGGGTTTGGAAGCACTaGAGAGGGCTAGCCGGGGCC | + |
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Preference number: 4 (lower is better) Translates to: FYPMSSWSHNSSSQSLWAGVWKH*RGLAGA Trigger: GGCCCCGGCTAGCCCTCTGCAGTGCTTCCAAACCCC...AGCCCACAGGGACTGAGAAGAACTGTTGTGGCTCCAAGAAGACATCGGGTAGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000182014.10 ENSMUST00000183018.8 |
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| CDS-3UTR CCA 90 bp | GGAGGCGAAGGCCCGAAGCCCCTTCTGAAGGCTTCCAGAGGACGTGGGCCTGCCATCTTTGTGAGGAGGTaGACAATATCCTCACACTCT | + |
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Preference number: 4 (lower is better) Translates to: GGEGPKPLLKASRGRGPAIFVRR*TISSHS Trigger: AGAGTGTGAGGATATTGTCCACCTCCTCACAAAGAT...GGCAGGCCCACGTCCTCTGGAAGCCTTCAGAAGGGGCTTCGGGCCTTCGCCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000182014.10 ENSMUST00000183018.8 |
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| CDS-3UTR CCA 90 bp | CTTGGAGCCACAACAGTTCTTCTCAGTCCCTGTGGGCTGTGGGAGCTATGGGAGCTTAGCCTGCCCACGTaGGCACAGGCCCACATGATT | + |
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Preference number: 4 (lower is better) Translates to: LGATTVLLSPCGLWELWELSLPT*AQAHMI Trigger: AATCATGTGGGCCTGTGCCCACGTGGGCAGGCTAAG...CTCCCATAGCTCCCACAGCCCACAGGGACTGAGAAGAACTGTTGTGGCTCCAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000182014.10 ENSMUST00000183018.8 |
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| CDS-3UTR GCA 90 bp | CCGATGTCTTCTTGGAGCCACAACAGTTCTTCTCAGTCCCTGTGGGCTGTGGGACTGCACTGCACTGCATaGTCCAGGCTTTGGCACCAG | + |
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Preference number: 4 (lower is better) Translates to: PMSSWSHNSSSQSLWAVGLHCTA*SRLWHQ Trigger: CTGGTGCCAAAGCCTGGAGCATGCAGTGCAGTGCAG...TCCCACAGCCCACAGGGACTGAGAAGAACTGTTGTGGCTCCAAGAAGACATCGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000182014.10 ENSMUST00000183018.8 |
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| CDS-3UTR GCA 90 bp | TGTCTTCTTGGAGCCACAACAGTTCTTCTCAGTCCCTGTGGGCTGTGGGAGCTAAGTGCCCCAGGGCTCTaGACTGCACTGCATGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: CLLGATTVLLSPCGLWELSAPGL*TALHAP Trigger: TGGAGCATGCAGTGCAGTGCAGAGCCCTGGGGCACT...TAGCTCCCACAGCCCACAGGGACTGAGAAGAACTGTTGTGGCTCCAAGAAGACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000182014.10 ENSMUST00000183018.8 |
||
| CDS-3UTR GCA 90 bp | TGGCTATACCCAGCTTCTACCCGATGTCTTCTTGGAGCCACAACAGTTCTTCTCGGGGTTTGGAAGCACTaGAGAGGGCTAGCCGGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: WLYPASTRCLLGATTVLLGVWKH*RGLAGA Trigger: GGCCCCGGCTAGCCCTCTGCAGTGCTTCCAAACCCC...GAGAAGAACTGTTGTGGCTCCAAGAAGACATCGGGTAGAAGCTGGGTATAGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000182014.10 ENSMUST00000183018.8 |
||
| CDS-3UTR CCA 90 bp | TGGTGGTGGTGGTGGTCTGTAGTTAGAGCTGGGACATACAGACTGACACAGGGCCTTAGCCTGCCCACGTaGGCACAGGCCCACATGATT | + |
|
Preference number: 4 (lower is better) Translates to: WWWWWSVVRAGTYRLTQGLSLPT*AQAHMI Trigger: AATCATGTGGGCCTGTGCCCACGTGGGCAGGCTAAG...GCCCTGTGTCAGTCTGTATGTCCCAGCTCTAACTACAGACCACCACCACCACCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000182014.10 ENSMUST00000183018.8 |
||
| CDS-3UTR CCA 90 bp | GAGCCACAACAGTTCTTCTCAGTCCCTGTGGGCTGTGGGAGCTATGGGAGCTGGCTGGTGCATTGCCTGTaGCATAGCCTGTTCACTGGT | + |
|
Preference number: 4 (lower is better) Translates to: EPQQFFSVPVGCGSYGSWLVHCL*HSLFTG Trigger: ACCAGTGAACAGGCTATGCCACAGGCAATGCACCAG...CCAGCTCCCATAGCTCCCACAGCCCACAGGGACTGAGAAGAACTGTTGTGGCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000182014.10 ENSMUST00000183018.8 |
||
| CDS-3UTR GCA 90 bp | AGCTTCTACCCGATGTCTTCTTGGAGCCACAACAGTTCTTCTCAGTCCCTGTGGCGAAGGCAGGCCTGGTaGATTGCCTGTGGCATAGCC | + |
|
Preference number: 4 (lower is better) Translates to: SFYPMSSWSHNSSSQSLWRRQAW*IACGIA Trigger: GGCTATGCCACAGGCAATGCACCAGGCCTGCCTTCG...CCACAGGGACTGAGAAGAACTGTTGTGGCTCCAAGAAGACATCGGGTAGAAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000182014.10 ENSMUST00000183018.8 |
||
| CDS-3UTR CCA 90 bp | TCTTCTTGGAGCCACAACAGTTCTTCTCAGTCCCTGTGGGCTGTGGGAGCTATGCGTGATAGCTGCACCTaGGCAGCAGAGGGTAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SSWSHNSSSQSLWAVGAMRDSCT*AAEGRK Trigger: CTTCCTACCCTCTGCTGCCCAGGTGCAGCTATCACG...CATAGCTCCCACAGCCCACAGGGACTGAGAAGAACTGTTGTGGCTCCAAGAAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000182014.10 ENSMUST00000183018.8 |
||
| CDS-3UTR CCA 90 bp | TCTTGGAGCCACAACAGTTCTTCTCAGTCCCTGTGGGCTGTGGGAGCTATGGGAAAGCGAAGGCAGGCCTaGTGCATTGCCTGTGGCATA | + |
|
Preference number: 4 (lower is better) Translates to: SWSHNSSSQSLWAVGAMGKRRQA*CIACGI Trigger: TATGCCACAGGCAATGCACCAGGCCTGCCTTCGCTT...TCCCATAGCTCCCACAGCCCACAGGGACTGAGAAGAACTGTTGTGGCTCCAAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000182014.10 ENSMUST00000183018.8 |
||
| CDS-3UTR CCA 90 bp | GGGGTTGGTGTGGCTATACCCAGCTTCTACCCGATGTCTTCTTGGAGCCACAACAAGCGAAGGCAGGCCTaGTGCATTGCCTGTGGCATA | + |
|
Preference number: 4 (lower is better) Translates to: GVGVAIPSFYPMSSWSHNKRRQA*CIACGI Trigger: TATGCCACAGGCAATGCACCAGGCCTGCCTTCGCTT...GTTGTGGCTCCAAGAAGACATCGGGTAGAAGCTGGGTATAGCCACACCAACCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000182014.10 ENSMUST00000183018.8 |
||
| CDS-3UTR CCA 90 bp | AGCTTCTACCCGATGTCTTCTTGGAGCCACAACAGTTCTTCTCAGTCCCTGTGGGCTCAGCCAGGCACTTaGGGATCACGGCTTGAACCC | + |
|
Preference number: 4 (lower is better) Translates to: SFYPMSSWSHNSSSQSLWAQPGT*GSRLEP Trigger: GGGTTCAAGCCGTGATCCCCAAGTGCCTGGCTGAGC...CCACAGGGACTGAGAAGAACTGTTGTGGCTCCAAGAAGACATCGGGTAGAAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183018.8 |
||
| CDS-3UTR TCA 90 bp | TACCCGATGTCTTCTTGGAGCCACAACAGTTCTTCTCAGTCCCTGTGGGCTGTGCTTTGGCACCAGAATTaGGGGCCTTGTGCACACTCC | + |
|
Preference number: 4 (lower is better) Translates to: YPMSSWSHNSSSQSLWAVLWHQN*GPCAHS Trigger: GGAGTGTGCACAAGGCCCTCAATTCTGGTGCCAAAG...CACAGCCCACAGGGACTGAGAAGAACTGTTGTGGCTCCAAGAAGACATCGGGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000182014.10 ENSMUST00000183018.8 |
||
| CDS-3UTR CCA 90 bp | CAGACTGACACAGGGCTGAGGGTGCAGGCTGAGGCTTGTCCTCTGGAGCAGGCTATCTTTGTGAGGAGGTaGACAATATCCTCACACTCT | + |
|
Preference number: 4 (lower is better) Translates to: QTDTGLRVQAEACPLEQAIFVRR*TISSHS Trigger: AGAGTGTGAGGATATTGTCCACCTCCTCACAAAGAT...AGCCTGCTCCAGAGGACAAGCCTCAGCCTGCACCCTCAGCCCTGTGTCAGTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000182014.10 ENSMUST00000183018.8 |
||
| CDS-3UTR CCA 90 bp | TGGTGGTGGTGGTGGTCTGTAGTTAGAGCTGGGACATACAGACTGACACAGGGCCTGGTGCATTGCCTGTaGCATAGCCTGTTCACTGGT | + |
|
Preference number: 4 (lower is better) Translates to: WWWWWSVVRAGTYRLTQGLVHCL*HSLFTG Trigger: ACCAGTGAACAGGCTATGCCACAGGCAATGCACCAG...GCCCTGTGTCAGTCTGTATGTCCCAGCTCTAACTACAGACCACCACCACCACCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000182014.10 ENSMUST00000183018.8 |
||
| CDS-3UTR TCA 90 bp | ATGTCTTCTTGGAGCCACAACAGTTCTTCTCAGTCCCTGTGGGCTGTGGGAGCTTTGGGGATCACGGCTTaGACCCGCTTGATCAGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: MSSWSHNSSSQSLWAVGALGITA*TRLIRV Trigger: AACTCTGATCAAGCGGGTTCAAGCCGTGATCCCCAA...AGCTCCCACAGCCCACAGGGACTGAGAAGAACTGTTGTGGCTCCAAGAAGACAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000182014.10 ENSMUST00000183018.8 |
||
| CDS-3UTR GCA 90 bp | TGTGGCTATACCCAGCTTCTACCCGATGTCTTCTTGGAGCCACAACAGTTCTTCGCAGGCCTGGTGCATTaGCTGTGGCATAGCCTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: CGYTQLLPDVFLEPQQFFAGLVH*LWHSLF Trigger: GAACAGGCTATGCCACAGGCAATGCACCAGGCCTGC...GAAGAACTGTTGTGGCTCCAAGAAGACATCGGGTAGAAGCTGGGTATAGCCACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000182014.10 ENSMUST00000183018.8 |
||
| CDS-3UTR GCA 90 bp | CTTCTTGGAGCCACAACAGTTCTTCTCAGTCCCTGTGGGCTGTGGGAGCTATGGAGCAGCTGGGGCATGTaGTGTTCCACAAACTGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LLGATTVLLSPCGLWELWSSWGM*CSTNCS Trigger: TGAACAGTTTGTGGAACAGCACATGCCCCAGCTGCT...CCATAGCTCCCACAGCCCACAGGGACTGAGAAGAACTGTTGTGGCTCCAAGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000182014.10 ENSMUST00000183018.8 |
||
| CDS-3UTR GCA 90 bp | GTGTGGCTATACCCAGCTTCTACCCGATGTCTTCTTGGAGCCACAACAGTTCTTCAGGTCATTAGCTCCTaGATGCCCCCAGACTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: VWLYPASTRCLLGATTVLQVISS*MPPDFL Trigger: CAGGAAGTCTGGGGGCATGCAGGAGCTAATGACCTG...AAGAACTGTTGTGGCTCCAAGAAGACATCGGGTAGAAGCTGGGTATAGCCACAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000182014.10 ENSMUST00000183018.8 |
||
| CDS-3UTR GCA 90 bp | CGATGTCTTCTTGGAGCCACAACAGTTCTTCTCAGTCCCTGTGGGCTGTGGGAGCAGGAACTTCCGGATTaGTTCCTGGAAAGCATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RCLLGATTVLLSPCGLWEQELPD*FLESIF Trigger: GAAGATGCTTTCCAGGAAGCAATCCGGAAGTTCCTG...CTCCCACAGCCCACAGGGACTGAGAAGAACTGTTGTGGCTCCAAGAAGACATCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000182014.10 ENSMUST00000183018.8 |
||
| CDS-3UTR GCA 90 bp | AGCTTCTACCCGATGTCTTCTTGGAGCCACAACAGTTCTTCTCAGTCCCTGTGGAGCAGCTGGGGCATGTaGTGTTCCACAAACTGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SFYPMSSWSHNSSSQSLWSSWGM*CSTNCS Trigger: TGAACAGTTTGTGGAACAGCACATGCCCCAGCTGCT...CCACAGGGACTGAGAAGAACTGTTGTGGCTCCAAGAAGACATCGGGTAGAAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000182014.10 ENSMUST00000183018.8 |
||
| CDS-3UTR GCA 90 bp | ATGTCTTCTTGGAGCCACAACAGTTCTTCTCAGTCCCTGTGGGCTGTGGGAGCTAACTGTTCACACTTTTaGCTGTCTAGCCAGAAGCGA | + |
|
Preference number: 4 (lower is better) Translates to: MSSWSHNSSSQSLWAVGANCSHF*LSSQKR Trigger: TCGCTTCTGGCTAGACAGGCAAAAGTGTGAACAGTT...AGCTCCCACAGCCCACAGGGACTGAGAAGAACTGTTGTGGCTCCAAGAAGACAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000182014.10 ENSMUST00000183018.8 |
||
| CDS-3UTR GCA 90 bp | TCTTCTTGGAGCCACAACAGTTCTTCTCAGTCCCTGTGGGCTGTGGGAGCTATGAACTGTTCACACTTTTaGCTGTCTAGCCAGAAGCGA | + |
|
Preference number: 4 (lower is better) Translates to: SSWSHNSSSQSLWAVGAMNCSHF*LSSQKR Trigger: TCGCTTCTGGCTAGACAGGCAAAAGTGTGAACAGTT...CATAGCTCCCACAGCCCACAGGGACTGAGAAGAACTGTTGTGGCTCCAAGAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000182014.10 ENSMUST00000183018.8 |
||
| CDS-3UTR TCA 90 bp | TGTGGCTATACCCAGCTTCTACCCGATGTCTTCTTGGAGCCACAACAGTTCTTCTGTTCCAGGCCTGGTTaGTCACAGACTTGCAGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: CGYTQLLPDVFLEPQQFFCSRPG*SQTCRN Trigger: ATTTCTGCAAGTCTGTGATCAACCAGGCCTGGAACA...GAAGAACTGTTGTGGCTCCAAGAAGACATCGGGTAGAAGCTGGGTATAGCCACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000182014.10 ENSMUST00000183018.8 |
||
| CDS-3UTR CCA 90 bp | TGTGGCTATACCCAGCTTCTACCCGATGTCTTCTTGGAGCCACAACAGTTCTTCTTCCGGATTGCTTCCTaGAAAGCATCTTCCTTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: CGYTQLLPDVFLEPQQFFFRIAS*KASSLV Trigger: GACCAAGGAAGATGCTTTCCAGGAAGCAATCCGGAA...GAAGAACTGTTGTGGCTCCAAGAAGACATCGGGTAGAAGCTGGGTATAGCCACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000182014.10 ENSMUST00000183018.8 |
||
| CDS-3UTR CCA 90 bp | TGTGGCTATACCCAGCTTCTACCCGATGTCTTCTTGGAGCCACAACAGTTCTTCACAGACTTGCAGAAATaGCACTCAGTGTCCTGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: CGYTQLLPDVFLEPQQFFTDLQK*HSVSCS Trigger: ACTACAGGACACTGAGTGCCATTTCTGCAAGTCTGT...GAAGAACTGTTGTGGCTCCAAGAAGACATCGGGTAGAAGCTGGGTATAGCCACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000182014.10 ENSMUST00000183018.8 |
||
| 3UTR CAA 72 bp | CTCAAGTTTGGATTTCATAGAAATGTTAGCAAGGGGTaGGTGTGGCTATACCCAGCTTCTACCCGATGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LKFGFHRNVSKG*VWLYPASTRCL Trigger: AAGACATCGGGTAGAAGCTGGGTATAGCCACACCAACCCCTTGCTAACATTTCTATGAAATCCAAACTTGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000182014.10 ENSMUST00000183018.8 |
||
| CDS-3UTR CCA 90 bp | TTCCCATTCTTTATTCTTCTCAAGTTTGGATTTCATAGAAATGTTAGCAAGGGGACAGACTTGCAGAAATaGCACTCAGTGTCCTGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: FPFFILLKFGFHRNVSKGTDLQK*HSVSCS Trigger: ACTACAGGACACTGAGTGCCATTTCTGCAAGTCTGT...CCCCTTGCTAACATTTCTATGAAATCCAAACTTGAGAAGAATAAAGAATGGGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000182014.10 ENSMUST00000183018.8 |
||
| CDS CCA 90 bp | AAGCACTGCAGAGGGCTAGCCGGGGCCTCACATACGCCAAGGGCCTaGCAGGTGATGTGGGCATCCTGGCTCCTAGGCACCAGGGCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: KHCRGLAGASHTPRA*QVMWASWLLGTRAS Trigger: GCTGGCCCTGGTGCCTAGGAGCCAGGATGCCCACATCACCTGCCAGGCCCTTGGCGTATGTGAGGCCCCGGCTAGCCCTCTGCAGTGCTT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000182014.10 ENSMUST00000183018.8 |
||
| CDS CCA 90 bp | TCAGCCAGGCACTGGCAGATGCCACCCACCACCAGGGGTACCACGTaGCACACCTGGGACACAGCCACAGCCAGCACACCCTTGGGGATC | + |
|
Preference number: 5 (lower is better) Translates to: SARHWQMPPTTRGTT*HTWDTATASTPLGI Trigger: GATCCCCAAGGGTGTGCTGGCTGTGGCTGTGTCCCAGGTGTGCCACGTGGTACCCCTGGTGGTGGGTGGCATCTGCCAGTGCCTGGCTGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000182014.10 |
||
| CDS GCA 90 bp | CGTCTAGCAGGAGAACTGTGTAGCGCTCAGCCAGGCACTGGCAGATaGCACCCACCACCAGGGGTACCACGTGGCACACCTGGGACACAG | + |
|
Preference number: 5 (lower is better) Translates to: RLAGELCSAQPGTGR*HPPPGVPRGTPGTQ Trigger: CTGTGTCCCAGGTGTGCCACGTGGTACCCCTGGTGGTGGGTGGCATCTGCCAGTGCCTGGCTGAGCGCTACACAGTTCTCCTGCTAGACG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182014.10 |
||
| CDS TCA 90 bp | CAGGCTTTGGCACCAGAATTGAGGGCCTTGTGCACACTCCAGGGATaGGGCCGACGTGATAGCTGCACCTGGGCAGCAGAGGGTAGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: QALAPELRALCTLQG*GRRDSCTWAAEGRK Trigger: CTTCCTACCCTCTGCTGCCCAGGTGCAGCTATCACGTCGGCCTCATCCCTGGAGTGTGCACAAGGCCCTCAATTCTGGTGCCAAAGCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000182014.10 ENSMUST00000183018.8 |
||
| CDS TCA 90 bp | ACCTGGGACACAGCCACAGCCAGCACACCCTTGGGGATCACGGCTTaGACCCGCTTGATCAGAGTTCTGCAAAGCCAGCAGAAGGGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: TWDTATASTPLGITA*TRLIRVLQSQQKGR Trigger: CCTGCCCTTCTGCTGGCTTTGCAGAACTCTGATCAAGCGGGTTCAAGCCGTGATCCCCAAGGGTGTGCTGGCTGTGGCTGTGTCCCAGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182014.10 |
||
| CDS CCA 90 bp | ATGGCATCCTCAGTGGAACATCGGAGGACAAGGCCACAGACTAGCTaGGGCACCACACGGCCCAGCAGTGCGTCTAGCAGGAGAACTGTG | + |
|
Preference number: 5 (lower is better) Translates to: MASSVEHRRTRPQTS*GTTRPSSASSRRTV Trigger: CACAGTTCTCCTGCTAGACGCACTGCTGGGCCGTGTGGTGCCCCAGCTAGTCTGTGGCCTTGTCCTCCGATGTTCCACTGAGGATGCCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000182014.10 ENSMUST00000183018.8 |
||
| CDS-3UTR CAA 90 bp | CAGACTGACACAGGGCTGAGGGTGCAGGCTGAGGCTTGTCCTCTGGAGCAGGCTGCTTTGGCACCAGAATaGAGGGCCTTGTGCACACTC | + |
|
Preference number: 5 (lower is better) Translates to: QTDTGLRVQAEACPLEQAALAPE*RALCTL Trigger: GAGTGTGCACAAGGCCCTCAATTCTGGTGCCAAAGC...AGCCTGCTCCAGAGGACAAGCCTCAGCCTGCACCCTCAGCCCTGTGTCAGTCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000182014.10 ENSMUST00000183018.8 |
||
| CDS CCA 90 bp | CAGCAGAGGGTTTGGAACGGCATCCGGCATCCCTGGATTCTGTTCTaGCTTAGCCTGCCCACGTGGGCACAGGCCCACATGATTGCAGAT | + |
|
Preference number: 5 (lower is better) Translates to: QQRVWNGIRHPWILF*LSLPTWAQAHMIAD Trigger: ATCTGCAATCATGTGGGCCTGTGCCCACGTGGGCAGGCTAAGCCAGAACAGAATCCAGGGATGCCGGATGCCGTTCCAAACCCTCTGCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000182014.10 ENSMUST00000183018.8 |
||
| CDS-3UTR CAA 90 bp | GAAGGCCCGAAGCCCCTTCTGAAGGCTTCCAGAGGACGTGGGCCTGCCGCCCCCAAGGATATCACATTCTaGTTCCAGGAACTTCCGGAT | + |
|
Preference number: 5 (lower is better) Translates to: EGPKPLLKASRGRGPAAPKDITF*FQELPD Trigger: ATCCGGAAGTTCCTGGAACAAGAATGTGATATCCTT...GGGGGCGGCAGGCCCACGTCCTCTGGAAGCCTTCAGAAGGGGCTTCGGGCCTTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000182014.10 ENSMUST00000183018.8 |
||
| CDS-3UTR CAA 90 bp | GGGGAGCCAGAAACCACTGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGTTCCAGGCCTGGTaGATCACAGACTTGCAGAAA | + |
|
Preference number: 5 (lower is better) Translates to: GEPETTVVVVVVVVVVVVVFQAW*ITDLQK Trigger: TTTCTGCAAGTCTGTGATCAACCAGGCCTGGAACAC...CACCACCACCACCACCACCACCACCACCACCACCACAGTGGTTTCTGGCTCCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000182014.10 ENSMUST00000183018.8 |
||
| CDS CCA 90 bp | GGCATCCGGCATCCCTGGATTCTGTTCTGGCTTAGCCTGCCCACGTaGGCACAGGCCCACATGATTGCAGATGGCTTTGGGGTTAATCTG | + |
|
Preference number: 5 (lower is better) Translates to: GIRHPWILFWLSLPT*AQAHMIADGFGVNL Trigger: CAGATTAACCCCAAAGCCATCTGCAATCATGTGGGCCTGTGCCCACGTGGGCAGGCTAAGCCAGAACAGAATCCAGGGATGCCGGATGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000182014.10 ENSMUST00000183018.8 |
||
| CDS-3UTR CAA 90 bp | CTTGGAGCCACAACAGTTCTTCTCAGTCCCTGTGGGCTGTGGGAGCTATGGGAGACAGGGAGGACCAGCTaGTCCAGCAGAGGGTTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: LGATTVLLSPCGLWELWETGRTS*SSRGFG Trigger: TCCAAACCCTCTGCTGGACAAGCTGGTCCTCCCTGT...CTCCCATAGCTCCCACAGCCCACAGGGACTGAGAAGAACTGTTGTGGCTCCAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000182014.10 ENSMUST00000183018.8 |
||
| CDS-3UTR CAA 90 bp | GAGCCAGAAACCACTGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGTTCCAGGCCTGGTaGATCACAGACTTGCAGAAA | + |
|
Preference number: 5 (lower is better) Translates to: EPETTVVVVVVVVVVVVVVFQAW*ITDLQK Trigger: TTTCTGCAAGTCTGTGATCAACCAGGCCTGGAACAC...CACCACCACCACCACCACCACCACCACCACCACCACCACAGTGGTTTCTGGCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000182014.10 ENSMUST00000183018.8 |
||
| CDS-3UTR CAA 90 bp | TTGGAGCCACAACAGTTCTTCTCAGTCCCTGTGGGCTGTGGGAGCTATGGGAGCGCTTTGGCACCAGAATaGAGGGCCTTGTGCACACTC | + |
|
Preference number: 5 (lower is better) Translates to: LEPQQFFSVPVGCGSYGSALAPE*RALCTL Trigger: GAGTGTGCACAAGGCCCTCAATTCTGGTGCCAAAGC...GCTCCCATAGCTCCCACAGCCCACAGGGACTGAGAAGAACTGTTGTGGCTCCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000182014.10 ENSMUST00000183018.8 |
||
| CDS-3UTR CAA 90 bp | CTTGGCTCTGGTGGAGGCGAAGGCCCGAAGCCCCTTCTGAAGGCTTCCAGAGGAAATATCCTCACACTCTaGGCACAGGTCATTAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LGSGGGEGPKPLLKASRGNILTL*AQVISS Trigger: GGAGCTAATGACCTGTGCCAAGAGTGTGAGGATATT...TCCTCTGGAAGCCTTCAGAAGGGGCTTCGGGCCTTCGCCTCCACCAGAGCCAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000182014.10 ENSMUST00000183018.8 |
||
| CDS-3UTR CAA 90 bp | CTTGGCTCTGGTGGAGGCGAAGGCCCGAAGCCCCTTCTGAAGGCTTCCAGAGGATGGTTGATCACAGACTaGCAGAAATGGCACTCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: LGSGGGEGPKPLLKASRGWLITD*QKWHSV Trigger: CACTGAGTGCCATTTCTGCAAGTCTGTGATCAACCA...TCCTCTGGAAGCCTTCAGAAGGGGCTTCGGGCCTTCGCCTCCACCAGAGCCAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000182014.10 ENSMUST00000183018.8 |
||
| CDS-3UTR CAA 90 bp | CAGACTGACACAGGGCTGAGGGTGCAGGCTGAGGCTTGTCCTCTGGAGCAGGCTTGGTTGATCACAGACTaGCAGAAATGGCACTCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: QTDTGLRVQAEACPLEQAWLITD*QKWHSV Trigger: CACTGAGTGCCATTTCTGCAAGTCTGTGATCAACCA...AGCCTGCTCCAGAGGACAAGCCTCAGCCTGCACCCTCAGCCCTGTGTCAGTCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000182014.10 ENSMUST00000183018.8 |
||
| CDS-3UTR CAA 90 bp | TGTCTTCTTGGAGCCACAACAGTTCTTCTCAGTCCCTGTGGGCTGTGGGAGCTAGTAGACATCAAGCACTaGGCGACACCGGGGCACAAG | + |
|
Preference number: 5 (lower is better) Translates to: CLLGATTVLLSPCGLWELVDIKH*ATPGHK Trigger: CTTGTGCCCCGGTGTCGCCAAGTGCTTGATGTCTAC...TAGCTCCCACAGCCCACAGGGACTGAGAAGAACTGTTGTGGCTCCAAGAAGACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000182014.10 ENSMUST00000183018.8 |
||
| CDS-3UTR CAA 90 bp | TACCCGATGTCTTCTTGGAGCCACAACAGTTCTTCTCAGTCCCTGTGGGCTGTGACAGGGAGGACCAGCTaGTCCAGCAGAGGGTTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: YPMSSWSHNSSSQSLWAVTGRTS*SSRGFG Trigger: TCCAAACCCTCTGCTGGACAAGCTGGTCCTCCCTGT...CACAGCCCACAGGGACTGAGAAGAACTGTTGTGGCTCCAAGAAGACATCGGGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000182014.10 ENSMUST00000183018.8 |
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| CDS-3UTR CAA 90 bp | TCTTGGAGCCACAACAGTTCTTCTCAGTCCCTGTGGGCTGTGGGAGCTATGGGAGGGAATGGGGAGCTGTaGCTCAGAGAAGTCCTGAGT | + |
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Preference number: 5 (lower is better) Translates to: SWSHNSSSQSLWAVGAMGGNGEL*LREVLS Trigger: ACTCAGGACTTCTCTGAGCAACAGCTCCCCATTCCC...TCCCATAGCTCCCACAGCCCACAGGGACTGAGAAGAACTGTTGTGGCTCCAAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000182014.10 ENSMUST00000183018.8 |
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| CDS-3UTR CAA 90 bp | GGGGTTGGTGTGGCTATACCCAGCTTCTACCCGATGTCTTCTTGGAGCCACAACCTTGGGGATCACGGCTaGAACCCGCTTGATCAGAGT | + |
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Preference number: 5 (lower is better) Translates to: GVGVAIPSFYPMSSWSHNLGDHG*NPLDQS Trigger: ACTCTGATCAAGCGGGTTCAAGCCGTGATCCCCAAG...GTTGTGGCTCCAAGAAGACATCGGGTAGAAGCTGGGTATAGCCACACCAACCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000182014.10 ENSMUST00000183018.8 |
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| CDS-3UTR CAA 90 bp | AGCTTCTACCCGATGTCTTCTTGGAGCCACAACAGTTCTTCTCAGTCCCTGTGGGTAGACATCAAGCACTaGGCGACACCGGGGCACAAG | + |
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Preference number: 5 (lower is better) Translates to: SFYPMSSWSHNSSSQSLWVDIKH*ATPGHK Trigger: CTTGTGCCCCGGTGTCGCCAAGTGCTTGATGTCTAC...CCACAGGGACTGAGAAGAACTGTTGTGGCTCCAAGAAGACATCGGGTAGAAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000182014.10 ENSMUST00000183018.8 |
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| CDS-3UTR CAA 90 bp | TACCCGATGTCTTCTTGGAGCCACAACAGTTCTTCTCAGTCCCTGTGGGCTGTGGGGAATGGGGAGCTGTaGCTCAGAGAAGTCCTGAGT | + |
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Preference number: 5 (lower is better) Translates to: YPMSSWSHNSSSQSLWAVGNGEL*LREVLS Trigger: ACTCAGGACTTCTCTGAGCAACAGCTCCCCATTCCC...CACAGCCCACAGGGACTGAGAAGAACTGTTGTGGCTCCAAGAAGACATCGGGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000182014.10 ENSMUST00000183018.8 |
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| CDS-3UTR CAA 90 bp | ATGTCTTCTTGGAGCCACAACAGTTCTTCTCAGTCCCTGTGGGCTGTGGGAGCTCTTGGGGATCACGGCTaGAACCCGCTTGATCAGAGT | + |
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Preference number: 5 (lower is better) Translates to: MSSWSHNSSSQSLWAVGALGDHG*NPLDQS Trigger: ACTCTGATCAAGCGGGTTCAAGCCGTGATCCCCAAG...AGCTCCCACAGCCCACAGGGACTGAGAAGAACTGTTGTGGCTCCAAGAAGACAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000182014.10 ENSMUST00000183018.8 |
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| CDS CCA 90 bp | TCCTTGGTCATCTTTGTGAGGAGGTGGACAATATCCTCACACTCTTaGCACAGGTCATTAGCTCCTGCATGCCCCCAGACTTCCTGCAGG | + |
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Preference number: 5 (lower is better) Translates to: SLVIFVRRWTISSHS*HRSLAPACPQTSCR Trigger: CCTGCAGGAAGTCTGGGGGCATGCAGGAGCTAATGACCTGTGCCAAGAGTGTGAGGATATTGTCCACCTCCTCACAAAGATGACCAAGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000182014.10 ENSMUST00000183018.8 |
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| CDS CCA 90 bp | TGTTCACTGGTGTTCCAGGCCTGGTTGATCACAGACTTGCAGAAATaGCACTCAGTGTCCTGTAGTGGCCATTCTTCTATCAGAGGCTCC | + |
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Preference number: 5 (lower is better) Translates to: CSLVFQAWLITDLQK*HSVSCSGHSSIRGS Trigger: GGAGCCTCTGATAGAAGAATGGCCACTACAGGACACTGAGTGCCATTTCTGCAAGTCTGTGATCAACCAGGCCTGGAACACCAGTGAACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000182014.10 ENSMUST00000183018.8 |
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| CDS-3UTR CAA 90 bp | TGTGGCTATACCCAGCTTCTACCCGATGTCTTCTTGGAGCCACAACAGTTCTTCAATATCCTCACACTCTaGGCACAGGTCATTAGCTCC | + |
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Preference number: 5 (lower is better) Translates to: CGYTQLLPDVFLEPQQFFNILTL*AQVISS Trigger: GGAGCTAATGACCTGTGCCAAGAGTGTGAGGATATT...GAAGAACTGTTGTGGCTCCAAGAAGACATCGGGTAGAAGCTGGGTATAGCCACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000182014.10 ENSMUST00000183018.8 |
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| CDS CCA 90 bp | ATTGCTTCCTGGAAAGCATCTTCCTTGGTCATCTTTGTGAGGAGGTaGACAATATCCTCACACTCTTGGCACAGGTCATTAGCTCCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: IASWKASSLVIFVRR*TISSHSWHRSLAPA Trigger: TGCAGGAGCTAATGACCTGTGCCAAGAGTGTGAGGATATTGTCCACCTCCTCACAAAGATGACCAAGGAAGATGCTTTCCAGGAAGCAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000182014.10 ENSMUST00000183018.8 |
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| CDS GCA 90 bp | CTTCAAGGGAAGGATATCACATTCTTGTTCCAGGAACTTCCGGATTaGTTCCTGGAAAGCATCTTCCTTGGTCATCTTTGTGAGGAGGTG | + |
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Preference number: 5 (lower is better) Translates to: LQGKDITFLFQELPD*FLESIFLGHLCEEV Trigger: CACCTCCTCACAAAGATGACCAAGGAAGATGCTTTCCAGGAAGCAATCCGGAAGTTCCTGGAACAAGAATGTGATATCCTTCCCTTGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000182014.10 ENSMUST00000183018.8 |
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| CDS-3UTR CAA 90 bp | GTGTGGCTATACCCAGCTTCTACCCGATGTCTTCTTGGAGCCACAACAGTTCTTAAGGATATCACATTCTaGTTCCAGGAACTTCCGGAT | + |
|
Preference number: 5 (lower is better) Translates to: VWLYPASTRCLLGATTVLKDITF*FQELPD Trigger: ATCCGGAAGTTCCTGGAACAAGAATGTGATATCCTT...AAGAACTGTTGTGGCTCCAAGAAGACATCGGGTAGAAGCTGGGTATAGCCACAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000182014.10 ENSMUST00000183018.8 |
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| CDS CCA 90 bp | GGAAGGATATCACATTCTTGTTCCAGGAACTTCCGGATTGCTTCCTaGAAAGCATCTTCCTTGGTCATCTTTGTGAGGAGGTGGACAATA | + |
|
Preference number: 5 (lower is better) Translates to: GRISHSCSRNFRIAS*KASSLVIFVRRWTI Trigger: TATTGTCCACCTCCTCACAAAGATGACCAAGGAAGATGCTTTCCAGGAAGCAATCCGGAAGTTCCTGGAACAAGAATGTGATATCCTTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000182014.10 ENSMUST00000183018.8 |
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| CDS-3UTR CAA 90 bp | TTCCCATTCTTTATTCTTCTCAAGTTTGGATTTCATAGAAATGTTAGCAAGGGGTGGAAAGCATCTTCCTaGGTCATCTTTGTGAGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: FPFFILLKFGFHRNVSKGWKASS*VIFVRR Trigger: CCTCCTCACAAAGATGACCAAGGAAGATGCTTTCCA...CCCCTTGCTAACATTTCTATGAAATCCAAACTTGAGAAGAATAAAGAATGGGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000182014.10 ENSMUST00000183018.8 |
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| CDS CCA 72 bp | CACTGGCAGATGCCACCCACCACCAGGGGTACCACGTaGCACACCTGGGACACAGCCACAGCCAGCACACCC | + |
|
Preference number: 6 (lower is better) Translates to: HWQMPPTTRGTT*HTWDTATASTP Trigger: GGGTGTGCTGGCTGTGGCTGTGTCCCAGGTGTGCCACGTGGTACCCCTGGTGGTGGGTGGCATCTGCCAGTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182014.10 |
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| CDS CCA 72 bp | ATGCCACCCACCACCAGGGGTACCACGTGGCACACCTaGGACACAGCCACAGCCAGCACACCCTTGGGGATC | + |
|
Preference number: 6 (lower is better) Translates to: MPPTTRGTTWHT*DTATASTPLGI Trigger: GATCCCCAAGGGTGTGCTGGCTGTGGCTGTGTCCCAGGTGTGCCACGTGGTACCCCTGGTGGTGGGTGGCAT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000182014.10 |
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| CDS GCA 72 bp | GGAGAACTGTGTAGCGCTCAGCCAGGCACTGGCAGATaGCACCCACCACCAGGGGTACCACGTGGCACACCT | + |
|
Preference number: 6 (lower is better) Translates to: GELCSAQPGTGR*HPPPGVPRGTP Trigger: AGGTGTGCCACGTGGTACCCCTGGTGGTGGGTGGCATCTGCCAGTGCCTGGCTGAGCGCTACACAGTTCTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182014.10 |
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| CDS CCA 72 bp | CCACAGCAGGGAGGGCAGGGCCCATGGCATCCTCAGTaGAACATCGGAGGACAAGGCCACAGACTAGCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: PQQGGQGPWHPQ*NIGGQGHRLAG Trigger: CCCAGCTAGTCTGTGGCCTTGTCCTCCGATGTTCCACTGAGGATGCCATGGGCCCTGCCCTCCCTGCTGTGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000182014.10 ENSMUST00000183018.8 |
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| CDS TCA 72 bp | GCACCAGAATTGAGGGCCTTGTGCACACTCCAGGGATaGGGCCGACGTGATAGCTGCACCTGGGCAGCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: APELRALCTLQG*GRRDSCTWAAE Trigger: CTCTGCTGCCCAGGTGCAGCTATCACGTCGGCCTCATCCCTGGAGTGTGCACAAGGCCCTCAATTCTGGTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000182014.10 ENSMUST00000183018.8 |
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| CDS GCA 72 bp | TCCTCACACTCTTGGCACAGGTCATTAGCTCCTGCATaGCCCCAGACTTCCTGCAGGCAGTGCCCCAGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: SSHSWHRSLAPA*PQTSCRQCPRA Trigger: AGCCCTGGGGCACTGCCTGCAGGAAGTCTGGGGGCATGCAGGAGCTAATGACCTGTGCCAAGAGTGTGAGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000182014.10 ENSMUST00000183018.8 |
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| CDS CAA 90 bp | CACCTGGGACACAGCCACAGCCAGCACACCCTTGGGGATCACGGCTaGAACCCGCTTGATCAGAGTTCTGCAAAGCCAGCAGAAGGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: HLGHSHSQHTLGDHG*NPLDQSSAKPAEGQ Trigger: CTGCCCTTCTGCTGGCTTTGCAGAACTCTGATCAAGCGGGTTCAAGCCGTGATCCCCAAGGGTGTGCTGGCTGTGGCTGTGTCCCAGGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182014.10 |
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| CDS TCA 72 bp | CCAGCACACCCTTGGGGATCACGGCTTGAACCCGCTTaGTCAGAGTTCTGCAAAGCCAGCAGAAGGGCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: PAHPWGSRLEPA*SEFCKASRRAG Trigger: CCCTGCCCTTCTGCTGGCTTTGCAGAACTCTGATCAAGCGGGTTCAAGCCGTGATCCCCAAGGGTGTGCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182014.10 |
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| CDS TCA 72 bp | CAGCCAGGCACTTGGGGATCACGGCTTGAACCCGCTTaGTCAGAGTTCTGCAAAGCCAGCAGAAGGGCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: QPGTWGSRLEPA*SEFCKASRRAG Trigger: CCCTGCCCTTCTGCTGGCTTTGCAGAACTCTGATCAAGCGGGTTCAAGCCGTGATCCCCAAGTGCCTGGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183018.8 |
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| CDS TCA 72 bp | TCTGGCTTAGCCTGCCCACGTGGGCACAGGCCCACATaGTTGCAGATGGCTTTGGGGTTAATCTGGCTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: SGLACPRGHRPT*LQMALGLIWLW Trigger: CCAGAGCCAGATTAACCCCAAAGCCATCTGCAATCATGTGGGCCTGTGCCCACGTGGGCAGGCTAAGCCAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000182014.10 ENSMUST00000183018.8 |
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| CDS TCA 72 bp | ACAGCCACAGCCAGCACACCCTTGGGGATCACGGCTTaGACCCGCTTGATCAGAGTTCTGCAAAGCCAGCAG | + |
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Preference number: 6 (lower is better) Translates to: TATASTPLGITA*TRLIRVLQSQQ Trigger: CTGCTGGCTTTGCAGAACTCTGATCAAGCGGGTTCAAGCCGTGATCCCCAAGGGTGTGCTGGCTGTGGCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182014.10 |
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| CDS CAA 72 bp | CACAGCCACAGCCAGCACACCCTTGGGGATCACGGCTaGAACCCGCTTGATCAGAGTTCTGCAAAGCCAGCA | + |
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Preference number: 6 (lower is better) Translates to: HSHSQHTLGDHG*NPLDQSSAKPA Trigger: TGCTGGCTTTGCAGAACTCTGATCAAGCGGGTTCAAGCCGTGATCCCCAAGGGTGTGCTGGCTGTGGCTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182014.10 |
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| CDS CCA 72 bp | CACTTTTGCCTGTCTAGCCAGAAGCGAAGGCAGGCCTaGTGCATTGCCTGTGGCATAGCCTGTTCACTGGTG | + |
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Preference number: 6 (lower is better) Translates to: HFCLSSQKRRQA*CIACGIACSLV Trigger: CACCAGTGAACAGGCTATGCCACAGGCAATGCACCAGGCCTGCCTTCGCTTCTGGCTAGACAGGCAAAAGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000182014.10 ENSMUST00000183018.8 |
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| CDS CAA 72 bp | TGTGTAGCGCTCAGCCAGGCACTTGGGGATCACGGCTaGAACCCGCTTGATCAGAGTTCTGCAAAGCCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: CVALSQALGDHG*NPLDQSSAKPA Trigger: TGCTGGCTTTGCAGAACTCTGATCAAGCGGGTTCAAGCCGTGATCCCCAAGTGCCTGGCTGAGCGCTACACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183018.8 |
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| CDS GCA 72 bp | TTTTGCCTGTCTAGCCAGAAGCGAAGGCAGGCCTGGTaGATTGCCTGTGGCATAGCCTGTTCACTGGTGTTC | + |
|
Preference number: 6 (lower is better) Translates to: FCLSSQKRRQAW*IACGIACSLVF Trigger: GAACACCAGTGAACAGGCTATGCCACAGGCAATGCACCAGGCCTGCCTTCGCTTCTGGCTAGACAGGCAAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000182014.10 ENSMUST00000183018.8 |
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| CDS CCA 72 bp | GCCTGTGGCATAGCCTGTTCACTGGTGTTCCAGGCCTaGTTGATCACAGACTTGCAGAAATGGCACTCAGTG | + |
|
Preference number: 6 (lower is better) Translates to: ACGIACSLVFQA*LITDLQKWHSV Trigger: CACTGAGTGCCATTTCTGCAAGTCTGTGATCAACCAGGCCTGGAACACCAGTGAACAGGCTATGCCACAGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000182014.10 ENSMUST00000183018.8 |
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| CDS CAA 90 bp | GCTCTGGAAGTAGTCAATAACCAGGGGCAGGTAGACATCAAGCACTaGGCGACACCGGGGCACAAGCAGCTTCAAGGGAAGGATATCACA | + |
|
Preference number: 6 (lower is better) Translates to: ALEVVNNQGQVDIKH*ATPGHKQLQGKDIT Trigger: TGTGATATCCTTCCCTTGAAGCTGCTTGTGCCCCGGTGTCGCCAAGTGCTTGATGTCTACCTGCCCCTGGTTATTGACTACTTCCAGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000182014.10 ENSMUST00000183018.8 |
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| CDS CAA 72 bp | CATCTTTGTGAGGAGGTGGACAATATCCTCACACTCTaGGCACAGGTCATTAGCTCCTGCATGCCCCCAGAC | + |
|
Preference number: 6 (lower is better) Translates to: HLCEEVDNILTL*AQVISSCMPPD Trigger: GTCTGGGGGCATGCAGGAGCTAATGACCTGTGCCAAGAGTGTGAGGATATTGTCCACCTCCTCACAAAGATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000182014.10 ENSMUST00000183018.8 |
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| CDS CAA 72 bp | TGTGGCATAGCCTGTTCACTGGTGTTCCAGGCCTGGTaGATCACAGACTTGCAGAAATGGCACTCAGTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: CGIACSLVFQAW*ITDLQKWHSVS Trigger: GGACACTGAGTGCCATTTCTGCAAGTCTGTGATCAACCAGGCCTGGAACACCAGTGAACAGGCTATGCCACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000182014.10 ENSMUST00000183018.8 |
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| CDS CAA 90 bp | TTCCTTGGTCATCTTTGTGAGGAGGTGGACAATATCCTCACACTCTaGGCACAGGTCATTAGCTCCTGCATGCCCCCAGACTTCCTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: FLGHLCEEVDNILTL*AQVISSCMPPDFLQ Trigger: CTGCAGGAAGTCTGGGGGCATGCAGGAGCTAATGACCTGTGCCAAGAGTGTGAGGATATTGTCCACCTCCTCACAAAGATGACCAAGGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000182014.10 ENSMUST00000183018.8 |
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| CDS CAA 90 bp | GGCATAGCCTGTTCACTGGTGTTCCAGGCCTGGTTGATCACAGACTaGCAGAAATGGCACTCAGTGTCCTGTAGTGGCCATTCTTCTATC | + |
|
Preference number: 6 (lower is better) Translates to: GIACSLVFQAWLITD*QKWHSVSCSGHSSI Trigger: GATAGAAGAATGGCCACTACAGGACACTGAGTGCCATTTCTGCAAGTCTGTGATCAACCAGGCCTGGAACACCAGTGAACAGGCTATGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000182014.10 ENSMUST00000183018.8 |
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| CDS CCA 72 bp | ATCTTTGTGAGGAGGTGGACAATATCCTCACACTCTTaGCACAGGTCATTAGCTCCTGCATGCCCCCAGACT | + |
|
Preference number: 6 (lower is better) Translates to: IFVRRWTISSHS*HRSLAPACPQT Trigger: AGTCTGGGGGCATGCAGGAGCTAATGACCTGTGCCAAGAGTGTGAGGATATTGTCCACCTCCTCACAAAGAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000182014.10 ENSMUST00000183018.8 |
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| CDS CAA 72 bp | TGTTCACTGGTGTTCCAGGCCTGGTTGATCACAGACTaGCAGAAATGGCACTCAGTGTCCTGTAGTGGCCAT | + |
|
Preference number: 6 (lower is better) Translates to: CSLVFQAWLITD*QKWHSVSCSGH Trigger: ATGGCCACTACAGGACACTGAGTGCCATTTCTGCAAGTCTGTGATCAACCAGGCCTGGAACACCAGTGAACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000182014.10 ENSMUST00000183018.8 |
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| CDS CCA 72 bp | GTGTTCCAGGCCTGGTTGATCACAGACTTGCAGAAATaGCACTCAGTGTCCTGTAGTGGCCATTCTTCTATC | + |
|
Preference number: 6 (lower is better) Translates to: VFQAWLITDLQK*HSVSCSGHSSI Trigger: GATAGAAGAATGGCCACTACAGGACACTGAGTGCCATTTCTGCAAGTCTGTGATCAACCAGGCCTGGAACAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000182014.10 ENSMUST00000183018.8 |
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| CDS CAA 90 bp | TCTTGTTCCAGGAACTTCCGGATTGCTTCCTGGAAAGCATCTTCCTaGGTCATCTTTGTGAGGAGGTGGACAATATCCTCACACTCTTGG | + |
|
Preference number: 6 (lower is better) Translates to: SCSRNFRIASWKASS*VIFVRRWTISSHSW Trigger: CCAAGAGTGTGAGGATATTGTCCACCTCCTCACAAAGATGACCAAGGAAGATGCTTTCCAGGAAGCAATCCGGAAGTTCCTGGAACAAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000182014.10 ENSMUST00000183018.8 |
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| CDS TCA 72 bp | TTGCTTCCTGGAAAGCATCTTCCTTGGTCATCTTTGTaGGGAGGTGGACAATATCCTCACACTCTTGGCACA | + |
|
Preference number: 6 (lower is better) Translates to: LLPGKHLPWSSL*GGGQYPHTLGT Trigger: TGTGCCAAGAGTGTGAGGATATTGTCCACCTCCTCACAAAGATGACCAAGGAAGATGCTTTCCAGGAAGCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000182014.10 ENSMUST00000183018.8 |
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| CDS CAA 72 bp | AGGAACTTCCGGATTGCTTCCTGGAAAGCATCTTCCTaGGTCATCTTTGTGAGGAGGTGGACAATATCCTCA | + |
|
Preference number: 6 (lower is better) Translates to: RNFRIASWKASS*VIFVRRWTISS Trigger: TGAGGATATTGTCCACCTCCTCACAAAGATGACCAAGGAAGATGCTTTCCAGGAAGCAATCCGGAAGTTCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000182014.10 ENSMUST00000183018.8 |
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| CDS CCA 72 bp | TGGAAAGCATCTTCCTTGGTCATCTTTGTGAGGAGGTaGACAATATCCTCACACTCTTGGCACAGGTCATTA | + |
|
Preference number: 6 (lower is better) Translates to: WKASSLVIFVRR*TISSHSWHRSL Trigger: TAATGACCTGTGCCAAGAGTGTGAGGATATTGTCCACCTCCTCACAAAGATGACCAAGGAAGATGCTTTCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000182014.10 ENSMUST00000183018.8 |
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| CDS CAA 72 bp | GAAGGATATCACATTCTTGTTCCAGGAACTTCCGGATaGCTTCCTGGAAAGCATCTTCCTTGGTCATCTTTG | + |
|
Preference number: 6 (lower is better) Translates to: EGYHILVPGTSG*LPGKHLPWSSL Trigger: CAAAGATGACCAAGGAAGATGCTTTCCAGGAAGCAATCCGGAAGTTCCTGGAACAAGAATGTGATATCCTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000182014.10 ENSMUST00000183018.8 |
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