Pregenerated sensors for SFT2D2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040848Ensembl transcript IDs: ENSMUST00000043338.10, ENSMUST00000192185.6, ENSMUST00000192565.2
Found 177 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCAGGGAGTGTGCCCAGGTGCCCAGGGCCCACACAAGGAAGCCAGTaGCTTCATCAGTGGCTTCTGCACACCCTCACTGGCAACTTCACA | + |
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Preference number: 1 (lower is better) Translates to: PGSVPRCPGPTQGSQ*LHQWLLHTLTGNFT Trigger: TGTGAAGTTGCCAGTGAGGGTGTGCAGAAGCCACTGATGAAGGCACTGGCTTCCTTGTGTGGGCCCTGGGCACCTGGGCACACTCCCTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043338.10 |
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| 3UTR TCA 90 bp | GTTCATGGAGACCCAACTTGCTGTGCCACATGCGCCCCAAGCCCTTaGTGCATTCTCTTCCACCGGCATCCTCCAGTGAGCCAGCAGGAC | + |
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Preference number: 1 (lower is better) Translates to: VHGDPTCCATCAPSP*CILFHRHPPVSQQD Trigger: GTCCTGCTGGCTCACTGGAGGATGCCGGTGGAAGAGAATGCATCAAGGGCTTGGGGCGCATGTGGCACAGCAAGTTGGGTCTCCATGAAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043338.10 ENSMUST00000192185.6 |
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| 3UTR TCA 90 bp | CCCAGGGAAGGCAGCATCAGGCCCACACCTGGAAACCAGCCTGGCTaGGGACCACACTGCCTCTACAGTGATCACTCAACAGTCCCCATT | + |
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Preference number: 1 (lower is better) Translates to: PREGSIRPTPGNQPG*GPHCLYSDHSTVPI Trigger: AATGGGGACTGTTGAGTGATCACTGTAGAGGCAGTGTGGTCCTCAGCCAGGCTGGTTTCCAGGTGTGGGCCTGATGCTGCCTTCCCTGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043338.10 ENSMUST00000192185.6 |
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| 3UTR CCA 90 bp | CCTGCTGCTCCGCTAGAAGCCCTGCTAGACCTTCCTGCTGCCACCTaGGAATCAGTTGCTCCTGAGGCTGATCTGCTGCTACCAGACAAA | + |
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Preference number: 1 (lower is better) Translates to: PAAPLEALLDLPAAT*ESVAPEADLLLPDK Trigger: TTTGTCTGGTAGCAGCAGATCAGCCTCAGGAGCAACTGATTCCCAGGTGGCAGCAGGAAGGTCTAGCAGGGCTTCTAGCGGAGCAGCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043338.10 ENSMUST00000192185.6 |
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| 3UTR GCA 90 bp | CACCGGCATTTGAATTTGGTTTTACTCCCAGGGAGTGTGCCCAGGTaGCCAGGGCCCACACAAGGAAGCCAGTGCCTTCATCAGTGGCTT | + |
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Preference number: 1 (lower is better) Translates to: HRHLNLVLLPGSVPR*PGPTQGSQCLHQWL Trigger: AAGCCACTGATGAAGGCACTGGCTTCCTTGTGTGGGCCCTGGGCACCTGGGCACACTCCCTGGGAGTAAAACCAAATTCAAATGCCGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043338.10 |
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| 3UTR GCA 90 bp | AGAATTGTGGCGATGAGACGCGTAGGCTCAAACATGCGCTTCAGCTaGTTCAGCGGCCCCATGAGGAAGACGGTAACACGCACTGCACGA | + |
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Preference number: 1 (lower is better) Translates to: RIVAMRRVGSNMRFS*FSGPMRKTVTRTAR Trigger: TCGTGCAGTGCGTGTTACCGTCTTCCTCATGGGGCCGCTGAAGCAGCTGAAGCGCATGTTTGAGCCTACGCGTCTCATCGCCACAATTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192565.2 |
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| 3UTR CCA 90 bp | CCCAGGTGCCCAGGGCCCACACAAGGAAGCCAGTGCCTTCATCAGTaGCTTCTGCACACCCTCACTGGCAACTTCACAGTCAGAATTACA | + |
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Preference number: 1 (lower is better) Translates to: PRCPGPTQGSQCLHQ*LLHTLTGNFTVRIT Trigger: TGTAATTCTGACTGTGAAGTTGCCAGTGAGGGTGTGCAGAAGCCACTGATGAAGGCACTGGCTTCCTTGTGTGGGCCCTGGGCACCTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043338.10 |
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| 3UTR GCA 90 bp | GCCCAGGGCCCACACAAGGAAGCCAGTGCCTTCATCAGTGGCTTCTaGACACCCTCACTGGCAACTTCACAGTCAGAATTACAAAGGACG | + |
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Preference number: 1 (lower is better) Translates to: AQGPHKEASAFISGF*TPSLATSQSELQRT Trigger: CGTCCTTTGTAATTCTGACTGTGAAGTTGCCAGTGAGGGTGTGCAGAAGCCACTGATGAAGGCACTGGCTTCCTTGTGTGGGCCCTGGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043338.10 |
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| 3UTR GCA 90 bp | GTGATCACTCAACAGTCCCCATTGGTTGGCAACACAGGGATGCCCTaGTCCATGGGTGTGAATGGGGAAGAATTGAGGGTAGGGAGGAGA | + |
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Preference number: 1 (lower is better) Translates to: VITQQSPLVGNTGMP*SMGVNGEELRVGRR Trigger: TCTCCTCCCTACCCTCAATTCTTCCCCATTCACACCCATGGAGCAGGGCATCCCTGTGTTGCCAACCAATGGGGACTGTTGAGTGATCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043338.10 ENSMUST00000192185.6 |
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| 3UTR GCA 90 bp | ACCAGCTTCCGTCCACGGTGCTCCCTGCACACTGGCAGTGTGTTATaGAAGACACACAGCAAAGCACTTCTTCACGGCATCCCTTGCATA | + |
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Preference number: 1 (lower is better) Translates to: TSFRPRCSLHTGSVL*KTHSKALLHGIPCI Trigger: TATGCAAGGGATGCCGTGAAGAAGTGCTTTGCTGTGTGTCTTGCATAACACACTGCCAGTGTGCAGGGAGCACCGTGGACGGAAGCTGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192185.6 |
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| 3UTR CCA 90 bp | ATGCAGGGAAAGGAACAATGTATCCCGGGCAGGCTCTCCAGGGTCTaGGCAGAATCACTTGTTCTCAAACAGCAGGGAAGACGCTGTGCA | + |
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Preference number: 1 (lower is better) Translates to: MQGKEQCIPGRLSRV*AESLVLKQQGRRCA Trigger: TGCACAGCGTCTTCCCTGCTGTTTGAGAACAAGTGATTCTGCCCAGACCCTGGAGAGCCTGCCCGGGATACATTGTTCCTTTCCCTGCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043338.10 ENSMUST00000192185.6 |
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| 3UTR TCA 90 bp | CTGTCAAGACAGGGTACTAATGATGCAAGGGATGCACTGAGCAGCTaGAAGGGACCACGGGATGCTGGCCATCCTACAGATGCAGACGTA | + |
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Preference number: 1 (lower is better) Translates to: LSRQGTNDARDALSS*KGPRDAGHPTDADV Trigger: TACGTCTGCATCTGTAGGATGGCCAGCATCCCGTGGTCCCTTTCAGCTGCTCAGTGCATCCCTTGCATCATTAGTACCCTGTCTTGACAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043338.10 ENSMUST00000192185.6 |
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| 3UTR TCA 90 bp | ACACAGAGGAGCAGGAGAGACAAAAGCTGCCTTAGGCTTGATCTGTaGAAAGGGACAGTGAGAGACAGGATTCAGTGGACAGGCCCCCAC | + |
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Preference number: 1 (lower is better) Translates to: TQRSRRDKSCLRLDL*KGTVRDRIQWTGPH Trigger: GTGGGGGCCTGTCCACTGAATCCTGTCTCTCACTGTCCCTTTTCACAGATCAAGCCTAAGGCAGCTTTTGTCTCTCCTGCTCCTCTGTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043338.10 ENSMUST00000192185.6 |
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| 3UTR TCA 90 bp | GGTGCACAAAGGAAAGGAAATCCACAGCCATGGGTGCACCTCGACTaGCCAATTCATTCCACCAAGTCTCATCCCGTGCACGGCAAAACC | + |
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Preference number: 1 (lower is better) Translates to: GAQRKGNPQPWVHLD*PIHSTKSHPVHGKT Trigger: GGTTTTGCCGTGCACGGGATGAGACTTGGTGGAATGAATTGGTCAGTCGAGGTGCACCCATGGCTGTGGATTTCCTTTCCTTTGTGCACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043338.10 |
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| 3UTR GCA 90 bp | ACCTTCCTGCTGCCACCTGGGAATCAGTTGCTCCTGAGGCTGATCTaGTGCTACCAGACAAAGCTGCTCTGTGAGAAGTCAGTGGAATAC | + |
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Preference number: 1 (lower is better) Translates to: TFLLPPGNQLLLRLI*CYQTKLLCEKSVEY Trigger: GTATTCCACTGACTTCTCACAGAGCAGCTTTGTCTGGTAGCAGCAGATCAGCCTCAGGAGCAACTGATTCCCAGGTGGCAGCAGGAAGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043338.10 ENSMUST00000192185.6 |
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| 3UTR GCA 90 bp | GGTCTGGGCAGAATCACTTGTTCTCAAACAGCAGGGAAGACGCTGTaGAGGGACTGTGGCAATGGTTTTCCTGGTGAGGGGCAAATCTTC | + |
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Preference number: 1 (lower is better) Translates to: GLGRITCSQTAGKTL*RDCGNGFPGEGQIF Trigger: GAAGATTTGCCCCTCACCAGGAAAACCATTGCCACAGTCCCTGCACAGCGTCTTCCCTGCTGTTTGAGAACAAGTGATTCTGCCCAGACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043338.10 ENSMUST00000192185.6 |
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| 3UTR CCA 90 bp | ACAAGGAAGCCAGTGCCTTCATCAGTGGCTTCTGCACACCCTCACTaGCAACTTCACAGTCAGAATTACAAAGGACGGAGTCCAGGGAGG | + |
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Preference number: 1 (lower is better) Translates to: TRKPVPSSVASAHPH*QLHSQNYKGRSPGR Trigger: CCTCCCTGGACTCCGTCCTTTGTAATTCTGACTGTGAAGTTGCCAGTGAGGGTGTGCAGAAGCCACTGATGAAGGCACTGGCTTCCTTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043338.10 |
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| 3UTR TCA 90 bp | ATATTGGCATGCACCACCATGCCCAGTGTATGCATTTCCAGGGACTaGACCACAGGCTCCATGCTAGGCAGGCACTCTAGACATGTAGTG | + |
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Preference number: 1 (lower is better) Translates to: ILACTTMPSVCISRD*TTGSMLGRHSRHVV Trigger: CACTACATGTCTAGAGTGCCTGCCTAGCATGGAGCCTGTGGTTCAGTCCCTGGAAATGCATACACTGGGCATGGTGGTGCATGCCAATAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043338.10 |
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| 3UTR GCA 90 bp | GGACATTTACAGAATTGTCCACCAGCTTCCGTCCACGGTGCTCCCTaGACACTGGCAGTGTGTTATGCAAGACACACAGCAAAGCACTTC | + |
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Preference number: 1 (lower is better) Translates to: GHLQNCPPASVHGAP*TLAVCYARHTAKHF Trigger: GAAGTGCTTTGCTGTGTGTCTTGCATAACACACTGCCAGTGTGCAGGGAGCACCGTGGACGGAAGCTGGTGGACAATTCTGTAAATGTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192185.6 |
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| 3UTR CCA 90 bp | CCCATTGGTTGGCAACACAGGGATGCCCTGCTCCATGGGTGTGAATaGGGAAGAATTGAGGGTAGGGAGGAGAAACAGATAACACCAACA | + |
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Preference number: 1 (lower is better) Translates to: PIGWQHRDALLHGCE*GRIEGREEKQITPT Trigger: TGTTGGTGTTATCTGTTTCTCCTCCCTACCCTCAATTCTTCCCCATTCACACCCATGGAGCAGGGCATCCCTGTGTTGCCAACCAATGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043338.10 ENSMUST00000192185.6 |
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| 3UTR TCA 90 bp | AACAGGCACAATGTTCTAAAGGCATACAAATCCACCACCGGCATTTaGATTTGGTTTTACTCCCAGGGAGTGTGCCCAGGTGCCCAGGGC | + |
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Preference number: 1 (lower is better) Translates to: NRHNVLKAYKSTTGI*IWFYSQGVCPGAQG Trigger: GCCCTGGGCACCTGGGCACACTCCCTGGGAGTAAAACCAAATTCAAATGCCGGTGGTGGATTTGTATGCCTTTAGAACATTGTGCCTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043338.10 |
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| 3UTR GCA 90 bp | GGACTCATGACTATTCCCACAGGCAACCCTCAAAAATGTCCAAATTaGAAGCCACACACCGCTGCAAGCAGAAGGCACGTGTCTGTGAGA | + |
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Preference number: 1 (lower is better) Translates to: GLMTIPTGNPQKCPN*KPHTAASRRHVSVR Trigger: TCTCACAGACACGTGCCTTCTGCTTGCAGCGGTGTGTGGCTTGCAATTTGGACATTTTTGAGGGTTGCCTGTGGGAATAGTCATGAGTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043338.10 ENSMUST00000192185.6 |
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| 3UTR CCA 90 bp | CTGCCACCAGCTAATTTCAAATGTCTCCCACAGTCACAGCAGGGCTaGAAATACTCAAAGCAGAACACTCCACCCCGAGCAAACTGGGAT | + |
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Preference number: 1 (lower is better) Translates to: LPPANFKCLPQSQQG*KYSKQNTPPRANWD Trigger: ATCCCAGTTTGCTCGGGGTGGAGTGTTCTGCTTTGAGTATTTCCAGCCCTGCTGTGACTGTGGGAGACATTTGAAATTAGCTGGTGGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043338.10 |
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| 3UTR TCA 90 bp | CAAATTGCAAGCCACACACCGCTGCAAGCAGAAGGCACGTGTCTGTaGGACAGAGGTTTAGAGGACATTTACAGAATTGTCCACCAGCTT | + |
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Preference number: 1 (lower is better) Translates to: QIASHTPLQAEGTCL*DRGLEDIYRIVHQL Trigger: AAGCTGGTGGACAATTCTGTAAATGTCCTCTAAACCTCTGTCTCACAGACACGTGCCTTCTGCTTGCAGCGGTGTGTGGCTTGCAATTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043338.10 ENSMUST00000192185.6 |
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| 3UTR GCA 90 bp | TTTTTCTCTGGTTTCAGATCAGCCAGTTTGCAGAAAGCCACTCTGTaGATCCCGAGTCTACCTTGTCAGTTACCAGCTCCTGACAGAATG | + |
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Preference number: 1 (lower is better) Translates to: FFSGFRSASLQKATL*IPSLPCQLPAPDRM Trigger: CATTCTGTCAGGAGCTGGTAACTGACAAGGTAGACTCGGGATGCACAGAGTGGCTTTCTGCAAACTGGCTGATCTGAAACCAGAGAAAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043338.10 |
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| 3UTR TCA 90 bp | TCCCGAGTCTACCTTGTCAGTTACCAGCTCCTGACAGAATGTATCTaGCTTGATATTGTCAGCTTATATGAAGGAAGGCTCTGCCACCAG | + |
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Preference number: 1 (lower is better) Translates to: SRVYLVSYQLLTECI*LDIVSLYEGRLCHQ Trigger: CTGGTGGCAGAGCCTTCCTTCATATAAGCTGACAATATCAAGTCAGATACATTCTGTCAGGAGCTGGTAACTGACAAGGTAGACTCGGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043338.10 |
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| 3UTR GCA 90 bp | CCTATATACTGGGCCTATTTTTCTCTGGTTTCAGATCAGCCAGTTTaGAGAAAGCCACTCTGTGCATCCCGAGTCTACCTTGTCAGTTAC | + |
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Preference number: 1 (lower is better) Translates to: PIYWAYFSLVSDQPV*RKPLCASRVYLVSY Trigger: GTAACTGACAAGGTAGACTCGGGATGCACAGAGTGGCTTTCTGCAAACTGGCTGATCTGAAACCAGAGAAAAATAGGCCCAGTATATAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043338.10 |
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| 3UTR GCA 90 bp | GTGTTATGCAAGACACACAGCAAAGCACTTCTTCACGGCATCCCTTaGATACGGTATATAGGAAAGGCTATACCACGTCAAGGCCAAAGA | + |
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Preference number: 1 (lower is better) Translates to: VLCKTHSKALLHGIP*IRYIGKAIPRQGQR Trigger: TCTTTGGCCTTGACGTGGTATAGCCTTTCCTATATACCGTATGCAAGGGATGCCGTGAAGAAGTGCTTTGCTGTGTGTCTTGCATAACAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000192185.6 ENSMUST00000192565.2 |
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| 3UTR-3UTR TCA 90 bp | GACAGGATTCAGTGGACAGGCCCCCACCCCACAGCATCCCAACAGTCAGCCTGGACCGGCATCCTCCAGTaGGCCAGCAGGACTTGTCAG | + |
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Preference number: 2 (lower is better) Translates to: DRIQWTGPHPTASQQSAWTGILQ*ASRTCQ Trigger: CTGACAAGTCCTGCTGGCTCACTGGAGGATGCCGGT...CCAGGCTGACTGTTGGGATGCTGTGGGGTGGGGGCCTGTCCACTGAATCCTGTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043338.10 ENSMUST00000192185.6 |
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| 3UTR-3UTR GCA 90 bp | TGCATTCTCTTCCACCGGCATCCTCCAGTGAGCCAGCAGGACTTGTCAGCCCACAGCTTCCGTCCACGGTaGTCCCTGCACACTGGCAGT | + |
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Preference number: 2 (lower is better) Translates to: CILFHRHPPVSQQDLSAHSFRPR*SLHTGS Trigger: ACTGCCAGTGTGCAGGGAGCACCGTGGACGGAAGCT...GTGGGCTGACAAGTCCTGCTGGCTCACTGGAGGATGCCGGTGGAAGAGAATGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043338.10 ENSMUST00000192185.6 |
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| 3UTR-3UTR TCA 90 bp | ATTCCACCAAGTCTCATCCCGTGCACGGCAAAACCTGTCACTCACGGGGATCCCGATGCACTGAGCAGCTaGAAGGGACCACGGGATGCT | + |
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Preference number: 2 (lower is better) Translates to: IPPSLIPCTAKPVTHGDPDALSS*KGPRDA Trigger: AGCATCCCGTGGTCCCTTTCAGCTGCTCAGTGCATC...GGGATCCCCGTGAGTGACAGGTTTTGCCGTGCACGGGATGAGACTTGGTGGAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043338.10 ENSMUST00000192185.6 |
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| 3UTR-3UTR TCA 90 bp | CTGGAAACCAGCCTGGCTGAGGACCACACTGCCTCTACAGTGATCACTCAACAGACCGGCATCCTCCAGTaGGCCAGCAGGACTTGTCAG | + |
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Preference number: 2 (lower is better) Translates to: LETSLAEDHTASTVITQQTGILQ*ASRTCQ Trigger: CTGACAAGTCCTGCTGGCTCACTGGAGGATGCCGGT...CTGTTGAGTGATCACTGTAGAGGCAGTGTGGTCCTCAGCCAGGCTGGTTTCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043338.10 ENSMUST00000192185.6 |
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| 3UTR-3UTR CCA 90 bp | AGGGAGTGTGCCCAGGTGCCCAGGGCCCACACAAGGAAGCCAGTGCCTTCATCAGATTCCCAAGGCTTCTaGGACATGAATGTGCCTCAC | + |
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Preference number: 2 (lower is better) Translates to: RECAQVPRAHTRKPVPSSDSQGF*DMNVPH Trigger: GTGAGGCACATTCATGTCCCAGAAGCCTTGGGAATC...TGATGAAGGCACTGGCTTCCTTGTGTGGGCCCTGGGCACCTGGGCACACTCCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043338.10 |
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| 3UTR CAA 90 bp | GCTGAGGACCACACTGCCTCTACAGTGATCACTCAACAGTCCCCATaGGTTGGCAACACAGGGATGCCCTGCTCCATGGGTGTGAATGGG | + |
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Preference number: 2 (lower is better) Translates to: AEDHTASTVITQQSP*VGNTGMPCSMGVNG Trigger: CCCATTCACACCCATGGAGCAGGGCATCCCTGTGTTGCCAACCAATGGGGACTGTTGAGTGATCACTGTAGAGGCAGTGTGGTCCTCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043338.10 ENSMUST00000192185.6 |
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| 3UTR-3UTR TCA 90 bp | ATTCCACCAAGTCTCATCCCGTGCACGGCAAAACCTGTCACTCACGGGGATCCCAGCCCTTCTGAGCCCTaGACTGATTCCCAAGGCTTC | + |
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Preference number: 2 (lower is better) Translates to: IPPSLIPCTAKPVTHGDPSPSEP*TDSQGF Trigger: GAAGCCTTGGGAATCAGTTCAGGGCTCAGAAGGGCT...GGGATCCCCGTGAGTGACAGGTTTTGCCGTGCACGGGATGAGACTTGGTGGAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043338.10 ENSMUST00000192185.6 |
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| 3UTR-3UTR GCA 90 bp | GGGAAGGCAGCATCAGGCCCACACCTGGAAACCAGCCTGGCTGAGGACCACACTAGAACACAGGGTAAGTaGAAAACACAGCAGCACCAG | + |
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Preference number: 2 (lower is better) Translates to: GKAASGPHLETSLAEDHTRTQGK*KTQQHQ Trigger: CTGGTGCTGCTGTGTTTTGCACTTACCCTGTGTTCT...AGTGTGGTCCTCAGCCAGGCTGGTTTCCAGGTGTGGGCCTGATGCTGCCTTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192185.6 |
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| 3UTR CAA 90 bp | AACAATGTATCCCGGGCAGGCTCTCCAGGGTCTGGGCAGAATCACTaGTTCTCAAACAGCAGGGAAGACGCTGTGCAGGGACTGTGGCAA | + |
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Preference number: 2 (lower is better) Translates to: NNVSRAGSPGSGQNH*FSNSREDAVQGLWQ Trigger: TTGCCACAGTCCCTGCACAGCGTCTTCCCTGCTGTTTGAGAACAAGTGATTCTGCCCAGACCCTGGAGAGCCTGCCCGGGATACATTGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043338.10 ENSMUST00000192185.6 |
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| 3UTR-3UTR CCA 90 bp | GCTGAGGACCACACTGCCTCTACAGTGATCACTCAACAGTCCCCATTGGTTGGCACAGTCCCCATTGGTTaGCAACACAGGGATGCCCTG | + |
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Preference number: 2 (lower is better) Translates to: AEDHTASTVITQQSPLVGTVPIG*QHRDAL Trigger: CAGGGCATCCCTGTGTTGCCAACCAATGGGGACTGT...GCCAACCAATGGGGACTGTTGAGTGATCACTGTAGAGGCAGTGTGGTCCTCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043338.10 ENSMUST00000192185.6 |
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| 3UTR-3UTR TCA 90 bp | GCCACCTGGGAATCAGTTGCTCCTGAGGCTGATCTGCTGCTACCAGACAAAGCTGAAGGCACGTGTCTGTaGGACAGAGGTTTAGAGGAC | + |
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Preference number: 2 (lower is better) Translates to: ATWESVAPEADLLLPDKAEGTCL*DRGLED Trigger: GTCCTCTAAACCTCTGTCTCACAGACACGTGCCTTC...AGCTTTGTCTGGTAGCAGCAGATCAGCCTCAGGAGCAACTGATTCCCAGGTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043338.10 ENSMUST00000192185.6 |
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| 3UTR-3UTR TCA 90 bp | CTCAAACAGCAGGGAAGACGCTGTGCAGGGACTGTGGCAATGGTTTTCCTGGTGGAAGGCACGTGTCTGTaGGACAGAGGTTTAGAGGAC | + |
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Preference number: 2 (lower is better) Translates to: LKQQGRRCAGTVAMVFLVEGTCL*DRGLED Trigger: GTCCTCTAAACCTCTGTCTCACAGACACGTGCCTTC...CACCAGGAAAACCATTGCCACAGTCCCTGCACAGCGTCTTCCCTGCTGTTTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043338.10 ENSMUST00000192185.6 |
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| 3UTR-3UTR TCA 90 bp | CAAGGGGATCCGAAGCTACTCTCCTGGTCCAGAAGGCACAATGGTGTTCTCAGTATGCAAGGGATGCACTaGGCAGCTGAAAGGGACCAC | + |
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Preference number: 2 (lower is better) Translates to: QGDPKLLSWSRRHNGVLSMQGMH*AAERDH Trigger: GTGGTCCCTTTCAGCTGCTCAGTGCATCCCTTGCAT...ACTGAGAACACCATTGTGCCTTCTGGACCAGGAGAGTAGCTTCGGATCCCCTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043338.10 ENSMUST00000192185.6 |
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| 3UTR-3UTR TCA 90 bp | GATCCCAACAACAAAAGCCAAACCAGCCCCGCCCTTCACATCCATTTCAGATACTGCGCCCCAAGCCCTTaGTGCATTCTCTTCCACCGG | + |
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Preference number: 2 (lower is better) Translates to: DPNNKSQTSPALHIHFRYCAPSP*CILFHR Trigger: CCGGTGGAAGAGAATGCATCAAGGGCTTGGGGCGCA...GTATCTGAAATGGATGTGAAGGGCGGGGCTGGTTTGGCTTTTGTTGTTGGGATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000043338.10 ENSMUST00000192185.6 |
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| 3UTR-3UTR TCA 90 bp | AGCCAAACCAGCCCCGCCCTTCACATCCATTTCAGATACTGCCCCGATGCTAATCAGACACCCAAGCACTaGAAAGGCCAAGCTGGGGAT | + |
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Preference number: 2 (lower is better) Translates to: SQTSPALHIHFRYCPDANQTPKH*KGQAGD Trigger: ATCCCCAGCTTGGCCTTTTCAGTGCTTGGGTGTCTG...ATTAGCATCGGGGCAGTATCTGAAATGGATGTGAAGGGCGGGGCTGGTTTGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000043338.10 ENSMUST00000192185.6 |
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| 3UTR-3UTR GCA 90 bp | GATCCCAACAACAAAAGCCAAACCAGCCCCGCCCTTCACATCCATTTCAGATACAGCTTCCGTCCACGGTaGTCCCTGCACACTGGCAGT | + |
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Preference number: 2 (lower is better) Translates to: DPNNKSQTSPALHIHFRYSFRPR*SLHTGS Trigger: ACTGCCAGTGTGCAGGGAGCACCGTGGACGGAAGCT...GTATCTGAAATGGATGTGAAGGGCGGGGCTGGTTTGGCTTTTGTTGTTGGGATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043338.10 ENSMUST00000192185.6 |
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| 3UTR-3UTR GCA 90 bp | ATTCCACCAAGTCTCATCCCGTGCACGGCAAAACCTGTCACTCACGGGGATCCCAGATGCAGACGTAGCTaGCAAAAAGCAAAACGGGGG | + |
|
Preference number: 2 (lower is better) Translates to: IPPSLIPCTAKPVTHGDPRCRRS*QKAKRG Trigger: CCCCCGTTTTGCTTTTTGGCAGCTACGTCTGCATCT...GGGATCCCCGTGAGTGACAGGTTTTGCCGTGCACGGGATGAGACTTGGTGGAAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000043338.10 ENSMUST00000192185.6 |
||
| 3UTR-3UTR GCA 90 bp | ATTCCACCAAGTCTCATCCCGTGCACGGCAAAACCTGTCACTCACGGGGATCCCAAGGCAGTTATCCGTTaGCTGACAGTCACTGTGACC | + |
|
Preference number: 2 (lower is better) Translates to: IPPSLIPCTAKPVTHGDPKAVIR*LTVTVT Trigger: GGTCACAGTGACTGTCAGGCAACGGATAACTGCCTT...GGGATCCCCGTGAGTGACAGGTTTTGCCGTGCACGGGATGAGACTTGGTGGAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043338.10 ENSMUST00000192185.6 |
||
| 3UTR-3UTR TCA 90 bp | ATTCCACCAAGTCTCATCCCGTGCACGGCAAAACCTGTCACTCACGGGGATCCCGACAAAGCTGCTCTGTaGGAAGTCAGTGGAATACCT | + |
|
Preference number: 2 (lower is better) Translates to: IPPSLIPCTAKPVTHGDPDKAAL*EVSGIP Trigger: AGGTATTCCACTGACTTCTCACAGAGCAGCTTTGTC...GGGATCCCCGTGAGTGACAGGTTTTGCCGTGCACGGGATGAGACTTGGTGGAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043338.10 ENSMUST00000192185.6 |
||
| 3UTR-3UTR TCA 90 bp | CTACTCTCCTGGTCCAGAAGGCACAATGGTGTTCTCAGTGAAGCACTCCAGACTTGTCAAAACAGAGGCTaGGAGCCAAGCCACAGCTGG | + |
|
Preference number: 2 (lower is better) Translates to: LLSWSRRHNGVLSEALQTCQNRG*EPSHSW Trigger: CCAGCTGTGGCTTGGCTCTCAGCCTCTGTTTTGACA...AGTCTGGAGTGCTTCACTGAGAACACCATTGTGCCTTCTGGACCAGGAGAGTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043338.10 ENSMUST00000192185.6 |
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| 3UTR-3UTR TCA 90 bp | GAGTTTCTGAGACCACTACTACTTTATGATGAAGGCAGTTATCCGTTGCCTGACCTAGACCACCCTCACTaGGGCCCCTGCTCCTGGGAG | + |
|
Preference number: 2 (lower is better) Translates to: EFLRPLLLYDEGSYPLPDLDHPH*GPCSWE Trigger: CTCCCAGGAGCAGGGGCCTCAGTGAGGGTGGTCTAG...GTCAGGCAACGGATAACTGCCTTCATCATAAAGTAGTAGTGGTCTCAGAAACTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043338.10 ENSMUST00000192185.6 |
||
| 3UTR-3UTR GCA 90 bp | CTACTCTCCTGGTCCAGAAGGCACAATGGTGTTCTCAGTGAAGCACTCCAGACTGCTAGACCTTCCTGCTaGCACCTGGGAATCAGTTGC | + |
|
Preference number: 2 (lower is better) Translates to: LLSWSRRHNGVLSEALQTARPSC*HLGISC Trigger: GCAACTGATTCCCAGGTGGCAGCAGGAAGGTCTAGC...AGTCTGGAGTGCTTCACTGAGAACACCATTGTGCCTTCTGGACCAGGAGAGTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043338.10 ENSMUST00000192185.6 |
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| 3UTR-3UTR GCA 90 bp | GAATATGCTAGACAAACTGACAGGCAGGCACCCATCCTGTCACCTTTAGCACTCGCAGGCATGCCTTCTTaGTGGCCCACGAGGGATCTT | + |
|
Preference number: 2 (lower is better) Translates to: EYARQTDRQAPILSPLALAGMPS*WPTRDL Trigger: AAGATCCCTCGTGGGCCAGCAAGAAGGCATGCCTGC...GAGTGCTAAAGGTGACAGGATGGGTGCCTGCCTGTCAGTTTGTCTAGCATATTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043338.10 ENSMUST00000192185.6 |
||
| 3UTR-3UTR GCA 90 bp | AGGGAGTGTGCCCAGGTGCCCAGGGCCCACACAAGGAAGCCAGTGCCTTCATCACAGTCATCCAAAAACTaGTTAAATGTGTCCAGACAC | + |
|
Preference number: 2 (lower is better) Translates to: RECAQVPRAHTRKPVPSSQSSKN*LNVSRH Trigger: GTGTCTGGACACATTTAAGCAGTTTTTGGATGACTG...TGATGAAGGCACTGGCTTCCTTGTGTGGGCCCTGGGCACCTGGGCACACTCCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043338.10 |
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| 3UTR-3UTR CCA 90 bp | CAAGGGGATCCGAAGCTACTCTCCTGGTCCAGAAGGCACAATGGTGTTCTCAGTAGGCTCTCCAGGGTCTaGGCAGAATCACTTGTTCTC | + |
|
Preference number: 2 (lower is better) Translates to: QGDPKLLSWSRRHNGVLSRLSRV*AESLVL Trigger: GAGAACAAGTGATTCTGCCCAGACCCTGGAGAGCCT...ACTGAGAACACCATTGTGCCTTCTGGACCAGGAGAGTAGCTTCGGATCCCCTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043338.10 ENSMUST00000192185.6 |
||
| 3UTR-3UTR CCA 90 bp | TGCATTCTCTTCCACCGGCATCCTCCAGTGAGCCAGCAGGACTTGTCAGCCCACATGCCTTCAACAGCATaGCTGGAATCTGGAAAGACT | + |
|
Preference number: 2 (lower is better) Translates to: CILFHRHPPVSQQDLSAHMPSTA*LESGKT Trigger: AGTCTTTCCAGATTCCAGCCATGCTGTTGAAGGCAT...GTGGGCTGACAAGTCCTGCTGGCTCACTGGAGGATGCCGGTGGAAGAGAATGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043338.10 ENSMUST00000192185.6 |
||
| 3UTR-3UTR CCA 90 bp | CTGGAAACCAGCCTGGCTGAGGACCACACTGCCTCTACAGTGATCACTCAACAGCTCCATGGGTGTGAATaGGGAAGAATTGAGGGTAGG | + |
|
Preference number: 2 (lower is better) Translates to: LETSLAEDHTASTVITQQLHGCE*GRIEGR Trigger: CCTACCCTCAATTCTTCCCCATTCACACCCATGGAG...CTGTTGAGTGATCACTGTAGAGGCAGTGTGGTCCTCAGCCAGGCTGGTTTCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043338.10 ENSMUST00000192185.6 |
||
| 3UTR-3UTR CCA 90 bp | AAACTCCACTGCGTTCCCCCTTCGCTAGCCGAAAAACACACAAGATCTCAAAGCACCTGGAAACCAGCCTaGCTGAGGACCACACTGCCT | + |
|
Preference number: 2 (lower is better) Translates to: KLHCVPPSLAEKHTRSQSTWKPA*LRTTLP Trigger: AGGCAGTGTGGTCCTCAGCCAGGCTGGTTTCCAGGT...GCTTTGAGATCTTGTGTGTTTTTCGGCTAGCGAAGGGGGAACGCAGTGGAGTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000043338.10 |
||
| 3UTR-3UTR CCA 90 bp | AGCCAAACCAGCCCCGCCCTTCACATCCATTTCAGATACTGCCCCGATGCTAATCCGAAGCTACTCTCCTaGTCCAGAAGGCACAATGGT | + |
|
Preference number: 2 (lower is better) Translates to: SQTSPALHIHFRYCPDANPKLLS*SRRHNG Trigger: ACCATTGTGCCTTCTGGACCAGGAGAGTAGCTTCGG...ATTAGCATCGGGGCAGTATCTGAAATGGATGTGAAGGGCGGGGCTGGTTTGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043338.10 ENSMUST00000192185.6 |
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| 3UTR CAA 90 bp | GCACAATGTTCTAAAGGCATACAAATCCACCACCGGCATTTGAATTaGGTTTTACTCCCAGGGAGTGTGCCCAGGTGCCCAGGGCCCACA | + |
|
Preference number: 2 (lower is better) Translates to: AQCSKGIQIHHRHLN*VLLPGSVPRCPGPT Trigger: TGTGGGCCCTGGGCACCTGGGCACACTCCCTGGGAGTAAAACCAAATTCAAATGCCGGTGGTGGATTTGTATGCCTTTAGAACATTGTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043338.10 |
||
| 3UTR-3UTR TCA 90 bp | GCTGAGGACCACACTGCCTCTACAGTGATCACTCAACAGTCCCCATTGGTTGGCGACAAAGCTGCTCTGTaGGAAGTCAGTGGAATACCT | + |
|
Preference number: 2 (lower is better) Translates to: AEDHTASTVITQQSPLVGDKAAL*EVSGIP Trigger: AGGTATTCCACTGACTTCTCACAGAGCAGCTTTGTC...GCCAACCAATGGGGACTGTTGAGTGATCACTGTAGAGGCAGTGTGGTCCTCAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043338.10 ENSMUST00000192185.6 |
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| 3UTR-3UTR GCA 90 bp | CTCCCACAGTCACAGCAGGGCTGGAAATACTCAAAGCAGAACACTCCACCCCGAAGAATAGCAAGACGGTaGCATGCAGGGAAAGGAACA | + |
|
Preference number: 2 (lower is better) Translates to: LPQSQQGWKYSKQNTPPRRIARR*HAGKGT Trigger: TGTTCCTTTCCCTGCATGGCACCGTCTTGCTATTCT...TCGGGGTGGAGTGTTCTGCTTTGAGTATTTCCAGCCCTGCTGTGACTGTGGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043338.10 |
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| 3UTR-3UTR GCA 90 bp | TTCTCTGGTTTCAGATCAGCCAGTTTGCAGAAAGCCACTCTGTGCATCCCGAGTAAAGGGACCACGGGATaGTGGCCATCCTACAGATGC | + |
|
Preference number: 2 (lower is better) Translates to: FSGFRSASLQKATLCIPSKGTTG*WPSYRC Trigger: GCATCTGTAGGATGGCCAGCATCCCGTGGTCCCTTT...ACTCGGGATGCACAGAGTGGCTTTCTGCAAACTGGCTGATCTGAAACCAGAGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043338.10 |
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| 3UTR-3UTR CCA 90 bp | GACAGGATTCAGTGGACAGGCCCCCACCCCACAGCATCCCAACAGTCAGCCTGGAAAAATCTGAGAGTCTaGAAGATTCTGGAAGACAGT | + |
|
Preference number: 2 (lower is better) Translates to: DRIQWTGPHPTASQQSAWKNLRV*KILEDS Trigger: ACTGTCTTCCAGAATCTTCCAGACTCTCAGATTTTT...CCAGGCTGACTGTTGGGATGCTGTGGGGTGGGGGCCTGTCCACTGAATCCTGTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000043338.10 ENSMUST00000192185.6 |
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| 3UTR CAA 90 bp | AGGACTCATGACTATTCCCACAGGCAACCCTCAAAAATGTCCAAATaGCAAGCCACACACCGCTGCAAGCAGAAGGCACGTGTCTGTGAG | + |
|
Preference number: 2 (lower is better) Translates to: RTHDYSHRQPSKMSK*QATHRCKQKARVCE Trigger: CTCACAGACACGTGCCTTCTGCTTGCAGCGGTGTGTGGCTTGCAATTTGGACATTTTTGAGGGTTGCCTGTGGGAATAGTCATGAGTCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043338.10 ENSMUST00000192185.6 |
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| 3UTR CAA 90 bp | GAACAGGCACAATGTTCTAAAGGCATACAAATCCACCACCGGCATTaGAATTTGGTTTTACTCCCAGGGAGTGTGCCCAGGTGCCCAGGG | + |
|
Preference number: 2 (lower is better) Translates to: EQAQCSKGIQIHHRH*NLVLLPGSVPRCPG Trigger: CCCTGGGCACCTGGGCACACTCCCTGGGAGTAAAACCAAATTCAAATGCCGGTGGTGGATTTGTATGCCTTTAGAACATTGTGCCTGTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043338.10 |
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| 3UTR-3UTR TCA 90 bp | TCAGAAAAGGTACAGGCCAGGAGGATGAAAGGAACAGTTATGAGAGACGACAGAGATGCACTGAGCAGCTaGAAGGGACCACGGGATGCT | + |
|
Preference number: 2 (lower is better) Translates to: SEKVQARRMKGTVMRDDRDALSS*KGPRDA Trigger: AGCATCCCGTGGTCCCTTTCAGCTGCTCAGTGCATC...TCTGTCGTCTCTCATAACTGTTCCTTTCATCCTCCTGGCCTGTACCTTTTCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043338.10 ENSMUST00000192185.6 |
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| 3UTR-3UTR TCA 90 bp | GCTCTTCATCCTTGCTATACCATCTTTAAAAGATACCTGGGCTCAAGCCCAGTCGGCCGTTCTCACATCTaGGCCCTTCTGAGCCCTGAA | + |
|
Preference number: 2 (lower is better) Translates to: ALHPCYTIFKRYLGSSPVGRSHI*ALLSPE Trigger: TTCAGGGCTCAGAAGGGCTCAGATGTGAGAACGGCC...GACTGGGCTTGAGCCCAGGTATCTTTTAAAGATGGTATAGCAAGGATGAAGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043338.10 ENSMUST00000192185.6 |
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| 3UTR-3UTR TCA 90 bp | CACAAAGTCACCATGAGAGAAACAGACACCCAAGCACTGAAAAGGCCAAGCTGGCCAGACACAAACTGTTaGAGCAAACTGGCCACAGGC | + |
|
Preference number: 2 (lower is better) Translates to: HKVTMRETDTQALKRPSWPDTNC*SKLATG Trigger: GCCTGTGGCCAGTTTGCTTCAACAGTTTGTGTCTGG...CCAGCTTGGCCTTTTCAGTGCTTGGGTGTCTGTTTCTCTCATGGTGACTTTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043338.10 ENSMUST00000192185.6 |
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| 3UTR-3UTR TCA 90 bp | CACAAAGTCACCATGAGAGAAACAGACACCCAAGCACTGAAAAGGCCAAGCTGGCAATGGTGTTCTCAGTaGAGCACTCCAGACTGCAGC | + |
|
Preference number: 2 (lower is better) Translates to: HKVTMRETDTQALKRPSWQWCSQ*STPDCS Trigger: GCTGCAGTCTGGAGTGCTTCACTGAGAACACCATTG...CCAGCTTGGCCTTTTCAGTGCTTGGGTGTCTGTTTCTCTCATGGTGACTTTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043338.10 ENSMUST00000192185.6 |
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| 3UTR-3UTR TCA 90 bp | AGCCAAACCAGCCCCGCCCTTCACATCCATTTCAGATACTGCCCCGATGCTAATTCCACAAAGTCACCATaGGAGAAACAGACACCCAAG | + |
|
Preference number: 2 (lower is better) Translates to: SQTSPALHIHFRYCPDANSTKSP*EKQTPK Trigger: CTTGGGTGTCTGTTTCTCTCATGGTGACTTTGTGGA...ATTAGCATCGGGGCAGTATCTGAAATGGATGTGAAGGGCGGGGCTGGTTTGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043338.10 ENSMUST00000192185.6 |
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| 3UTR-3UTR CCA 90 bp | GCTCTTCATCCTTGCTATACCATCTTTAAAAGATACCTGGGCTCAAGCCCAGTCGGGACCACGGGATGCTaGCCATCCTACAGATGCAGA | + |
|
Preference number: 2 (lower is better) Translates to: ALHPCYTIFKRYLGSSPVGTTGC*PSYRCR Trigger: TCTGCATCTGTAGGATGGCCAGCATCCCGTGGTCCC...GACTGGGCTTGAGCCCAGGTATCTTTTAAAGATGGTATAGCAAGGATGAAGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043338.10 ENSMUST00000192185.6 |
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| 3UTR-3UTR TCA 90 bp | ACAGTGAAACTGAGGAACCAAACATTAGGTAACTTCCAAGGCCTCCACCAGCATTGTCAAAACAGAGGCTaGGAGCCAAGCCACAGCTGG | + |
|
Preference number: 2 (lower is better) Translates to: TVKLRNQTLGNFQGLHQHCQNRG*EPSHSW Trigger: CCAGCTGTGGCTTGGCTCTCAGCCTCTGTTTTGACA...ATGCTGGTGGAGGCCTTGGAAGTTACCTAATGTTTGGTTCCTCAGTTTCACTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043338.10 ENSMUST00000192185.6 |
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| 3UTR-3UTR TCA 90 bp | GCTCTTCATCCTTGCTATACCATCTTTAAAAGATACCTGGGCTCAAGCCCAGTCATGCAAGGGATGCACTaGGCAGCTGAAAGGGACCAC | + |
|
Preference number: 2 (lower is better) Translates to: ALHPCYTIFKRYLGSSPVMQGMH*AAERDH Trigger: GTGGTCCCTTTCAGCTGCTCAGTGCATCCCTTGCAT...GACTGGGCTTGAGCCCAGGTATCTTTTAAAGATGGTATAGCAAGGATGAAGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043338.10 ENSMUST00000192185.6 |
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| 3UTR-3UTR TCA 90 bp | CTCAAACAGCAGGGAAGACGCTGTGCAGGGACTGTGGCAATGGTTTTCCTGGTGGCAAAATACAGAAGATaGGTGCAAGTCCCTTATTCC | + |
|
Preference number: 2 (lower is better) Translates to: LKQQGRRCAGTVAMVFLVAKYRR*VQVPYS Trigger: GGAATAAGGGACTTGCACTCATCTTCTGTATTTTGC...CACCAGGAAAACCATTGCCACAGTCCCTGCACAGCGTCTTCCCTGCTGTTTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000192185.6 |
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| 3UTR-3UTR TCA 90 bp | TTGCATACGGTATATAGGAAAGGCTATACCACGTCAAGGCCAAAGACTGCAAAAGCACTGCACGAGGGGTaGGATGAGAGCCAGGATCTG | + |
|
Preference number: 2 (lower is better) Translates to: LHTVYRKGYTTSRPKTAKALHEG*DESQDL Trigger: CAGATCCTGGCTCTCATCTCACCCCTCGTGCAGTGC...TTTTGCAGTCTTTGGCCTTGACGTGGTATAGCCTTTCCTATATACCGTATGCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000192565.2 |
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| 3UTR-3UTR GCA 90 bp | TTATATGAAGGAAGGCTCTGCCACCAGCTAATTTCAAATGTCTCCCACAGTCACCCTGCTAGACCTTCCTaGTGCCACCTGGGAATCAGT | + |
|
Preference number: 2 (lower is better) Translates to: LYEGRLCHQLISNVSHSHPARPS*CHLGIS Trigger: ACTGATTCCCAGGTGGCAGCAGGAAGGTCTAGCAGG...GTGACTGTGGGAGACATTTGAAATTAGCTGGTGGCAGAGCCTTCCTTCATATAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043338.10 |
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| 3UTR-3UTR CCA 90 bp | TCAGAAAAGGTACAGGCCAGGAGGATGAAAGGAACAGTTATGAGAGACGACAGAAGGCTCTCCAGGGTCTaGGCAGAATCACTTGTTCTC | + |
|
Preference number: 2 (lower is better) Translates to: SEKVQARRMKGTVMRDDRRLSRV*AESLVL Trigger: GAGAACAAGTGATTCTGCCCAGACCCTGGAGAGCCT...TCTGTCGTCTCTCATAACTGTTCCTTTCATCCTCCTGGCCTGTACCTTTTCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043338.10 ENSMUST00000192185.6 |
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| 3UTR-3UTR TCA 90 bp | CTGAAGACCTCATCGATGCCTTCAACAGCATGGCTGGAATCTGGAAAGACTGAGTTCCTTGACTGCAGTTaGGACAACTCATATGGCTCT | + |
|
Preference number: 2 (lower is better) Translates to: LKTSSMPSTAWLESGKTEFLDCS*DNSYGS Trigger: AGAGCCATATGAGTTGTCTCAACTGCAGTCAAGGAA...CTCAGTCTTTCCAGATTCCAGCCATGCTGTTGAAGGCATCGATGAGGTCTTCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043338.10 ENSMUST00000192185.6 |
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| 3UTR-3UTR GCA 90 bp | GTCAGCTTATATGAAGGAAGGCTCTGCCACCAGCTAATTTCAAATGTCTCCCACACTACTAGTGTCCAGTaGAGGCTGAGAGTCAACGCT | + |
|
Preference number: 2 (lower is better) Translates to: VSLYEGRLCHQLISNVSHTTSVQ*RLRVNA Trigger: AGCGTTGACTCTCAGCCTGCACTGGACACTAGTAGT...GTGGGAGACATTTGAAATTAGCTGGTGGCAGAGCCTTCCTTCATATAAGCTGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043338.10 |
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| 3UTR-3UTR GCA 90 bp | TCAGAAAAGGTACAGGCCAGGAGGATGAAAGGAACAGTTATGAGAGACGACAGAACTACTAGTGTCCAGTaGAGGCTGAGAGTCAACGCT | + |
|
Preference number: 2 (lower is better) Translates to: SEKVQARRMKGTVMRDDRTTSVQ*RLRVNA Trigger: AGCGTTGACTCTCAGCCTGCACTGGACACTAGTAGT...TCTGTCGTCTCTCATAACTGTTCCTTTCATCCTCCTGGCCTGTACCTTTTCTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043338.10 ENSMUST00000192185.6 |
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| 3UTR-3UTR GCA 90 bp | GGGAATCAGTTGCTCCTGAGGCTGATCTGCTGCTACCAGACAAAGCTGCTCTGTGTCAAGGCCAAAGACTaGAAAATACAGAAGATGAGT | + |
|
Preference number: 2 (lower is better) Translates to: GNQLLLRLICCYQTKLLCVKAKD*KIQKMS Trigger: ACTCATCTTCTGTATTTTGCAGTCTTTGGCCTTGAC...ACAGAGCAGCTTTGTCTGGTAGCAGCAGATCAGCCTCAGGAGCAACTGATTCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192185.6 |
||
| 3UTR CAA 90 bp | TGTGTTATGCAAGACACACAGCAAAGCACTTCTTCACGGCATCCCTaGCATACGGTATATAGGAAAGGCTATACCACGTCAAGGCCAAAG | + |
|
Preference number: 2 (lower is better) Translates to: CVMQDTQQSTSSRHP*HTVYRKGYTTSRPK Trigger: CTTTGGCCTTGACGTGGTATAGCCTTTCCTATATACCGTATGCAAGGGATGCCGTGAAGAAGTGCTTTGCTGTGTGTCTTGCATAACACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000192185.6 ENSMUST00000192565.2 |
||
| 3UTR-3UTR TCA 90 bp | TCCACTTCAGCCTCACTCACTAAGTTGCTTTTAATCAATACTACTGGCTTGGTACAACAACCGCAGAGATaGGTGCTCTCACCTCCTGTG | + |
|
Preference number: 2 (lower is better) Translates to: STSASLTKLLLINTTGLVQQPQR*VLSPPV Trigger: CACAGGAGGTGAGAGCACTCATCTCTGCGGTTGTTG...TACCAAGCCAGTAGTATTGATTAAAAGCAACTTAGTGAGTGAGGCTGAAGTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043338.10 ENSMUST00000192185.6 |
||
| 3UTR-3UTR GCA 90 bp | ACAGTGAAACTGAGGAACCAAACATTAGGTAACTTCCAAGGCCTCCACCAGCATAGAATAGCAAGACGGTaGCATGCAGGGAAAGGAACA | + |
|
Preference number: 2 (lower is better) Translates to: TVKLRNQTLGNFQGLHQHRIARR*HAGKGT Trigger: TGTTCCTTTCCCTGCATGGCACCGTCTTGCTATTCT...ATGCTGGTGGAGGCCTTGGAAGTTACCTAATGTTTGGTTCCTCAGTTTCACTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043338.10 ENSMUST00000192185.6 |
||
| 3UTR-3UTR GCA 90 bp | AGCCAAACCAGCCCCGCCCTTCACATCCATTTCAGATACTGCCCCGATGCTAATAATACAGAAGATGAGTaGAAGTCCCTTATTCCACAA | + |
|
Preference number: 2 (lower is better) Translates to: SQTSPALHIHFRYCPDANNTEDE*KSLIPQ Trigger: TTGTGGAATAAGGGACTTGCACTCATCTTCTGTATT...ATTAGCATCGGGGCAGTATCTGAAATGGATGTGAAGGGCGGGGCTGGTTTGGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000192185.6 |
||
| 3UTR CAA 90 bp | TCCTATATACTGGGCCTATTTTTCTCTGGTTTCAGATCAGCCAGTTaGCAGAAAGCCACTCTGTGCATCCCGAGTCTACCTTGTCAGTTA | + |
|
Preference number: 2 (lower is better) Translates to: SYILGLFFSGFRSAS*QKATLCIPSLPCQL Trigger: TAACTGACAAGGTAGACTCGGGATGCACAGAGTGGCTTTCTGCAAACTGGCTGATCTGAAACCAGAGAAAAATAGGCCCAGTATATAGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043338.10 |
||
| 3UTR-3UTR GCA 90 bp | TCAGAAAAGGTACAGGCCAGGAGGATGAAAGGAACAGTTATGAGAGACGACAGACAAAAATGTCCAAATTaGAAGCCACACACCGCTGCA | + |
|
Preference number: 2 (lower is better) Translates to: SEKVQARRMKGTVMRDDRQKCPN*KPHTAA Trigger: TGCAGCGGTGTGTGGCTTGCAATTTGGACATTTTTG...TCTGTCGTCTCTCATAACTGTTCCTTTCATCCTCCTGGCCTGTACCTTTTCTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043338.10 ENSMUST00000192185.6 |
||
| 3UTR-3UTR GCA 90 bp | GAGTTTCTGAGACCACTACTACTTTATGATGAAGGCAGTTATCCGTTGCCTGACCAAAAATGTCCAAATTaGAAGCCACACACCGCTGCA | + |
|
Preference number: 2 (lower is better) Translates to: EFLRPLLLYDEGSYPLPDQKCPN*KPHTAA Trigger: TGCAGCGGTGTGTGGCTTGCAATTTGGACATTTTTG...GTCAGGCAACGGATAACTGCCTTCATCATAAAGTAGTAGTGGTCTCAGAAACTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043338.10 ENSMUST00000192185.6 |
||
| 3UTR-3UTR TCA 90 bp | TCCACTTCAGCCTCACTCACTAAGTTGCTTTTAATCAATACTACTGGCTTGGTATGTAACTTTGCTTCCTaGCTGAAGACCTCATCGATG | + |
|
Preference number: 2 (lower is better) Translates to: STSASLTKLLLINTTGLVCNFAS*LKTSSM Trigger: CATCGATGAGGTCTTCAGTCAGGAAGCAAAGTTACA...TACCAAGCCAGTAGTATTGATTAAAAGCAACTTAGTGAGTGAGGCTGAAGTGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043338.10 ENSMUST00000192185.6 |
||
| 3UTR-3UTR TCA 90 bp | TCCTATATACTGGGCCTATTTTTCTCTGGTTTCAGATCAGCCAGTTTGCAGAAATCAGTTACCAGCTCCTaGCAGAATGTATCTGACTTG | + |
|
Preference number: 2 (lower is better) Translates to: SYILGLFFSGFRSASLQKSVTSS*QNVSDL Trigger: CAAGTCAGATACATTCTGTCAGGAGCTGGTAACTGA...TTTCTGCAAACTGGCTGATCTGAAACCAGAGAAAAATAGGCCCAGTATATAGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043338.10 |
||
| 3UTR-3UTR GCA 90 bp | GCTCTTCATCCTTGCTATACCATCTTTAAAAGATACCTGGGCTCAAGCCCAGTCATGTTCACACTGTTATaGTCTTCATCCTTGCTATAC | + |
|
Preference number: 2 (lower is better) Translates to: ALHPCYTIFKRYLGSSPVMFTLL*SSSLLY Trigger: GTATAGCAAGGATGAAGAGCATAACAGTGTGAACAT...GACTGGGCTTGAGCCCAGGTATCTTTTAAAGATGGTATAGCAAGGATGAAGAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043338.10 ENSMUST00000192185.6 |
||
| 3UTR CAA 90 bp | ACTTCAGCCTCACTCACTAAGTTGCTTTTAATCAATACTACTGGCTaGGTAGGAGACTTTAGCAGATATGAAGTGGCTTTCTTCCTTCTA | + |
|
Preference number: 2 (lower is better) Translates to: TSASLTKLLLINTTG*VGDFSRYEVAFFLL Trigger: TAGAAGGAAGAAAGCCACTTCATATCTGCTAAAGTCTCCTACCAAGCCAGTAGTATTGATTAAAAGCAACTTAGTGAGTGAGGCTGAAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043338.10 ENSMUST00000192185.6 |
||
| 3UTR TCA 72 bp | GACCCAACTTGCTGTGCCACATGCGCCCCAAGCCCTTaGTGCATTCTCTTCCACCGGCATCCTCCAGTGAGC | + |
|
Preference number: 3 (lower is better) Translates to: DPTCCATCAPSP*CILFHRHPPVS Trigger: GCTCACTGGAGGATGCCGGTGGAAGAGAATGCATCAAGGGCTTGGGGCGCATGTGGCACAGCAAGTTGGGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043338.10 ENSMUST00000192185.6 |
||
| 3UTR GCA 72 bp | GCGATGAGACGCGTAGGCTCAAACATGCGCTTCAGCTaGTTCAGCGGCCCCATGAGGAAGACGGTAACACGC | + |
|
Preference number: 3 (lower is better) Translates to: AMRRVGSNMRFS*FSGPMRKTVTR Trigger: GCGTGTTACCGTCTTCCTCATGGGGCCGCTGAAGCAGCTGAAGCGCATGTTTGAGCCTACGCGTCTCATCGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192565.2 |
||
| 3UTR CCA 72 bp | CCCACAGCATCCCAACAGTCAGCCTGGAGTAGAGGTTaGACCAGCCAAGGGGATCCGAAGCTACTCTCCTGG | + |
|
Preference number: 3 (lower is better) Translates to: PTASQQSAWSRG*TSQGDPKLLSW Trigger: CCAGGAGAGTAGCTTCGGATCCCCTTGGCTGGTCCAACCTCTACTCCAGGCTGACTGTTGGGATGCTGTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043338.10 ENSMUST00000192185.6 |
||
| 3UTR TCA 72 bp | GGCAGCATCAGGCCCACACCTGGAAACCAGCCTGGCTaGGGACCACACTGCCTCTACAGTGATCACTCAACA | + |
|
Preference number: 3 (lower is better) Translates to: GSIRPTPGNQPG*GPHCLYSDHST Trigger: TGTTGAGTGATCACTGTAGAGGCAGTGTGGTCCTCAGCCAGGCTGGTTTCCAGGTGTGGGCCTGATGCTGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043338.10 ENSMUST00000192185.6 |
||
| 3UTR CCA 72 bp | CCGCTAGAAGCCCTGCTAGACCTTCCTGCTGCCACCTaGGAATCAGTTGCTCCTGAGGCTGATCTGCTGCTA | + |
|
Preference number: 3 (lower is better) Translates to: PLEALLDLPAAT*ESVAPEADLLL Trigger: TAGCAGCAGATCAGCCTCAGGAGCAACTGATTCCCAGGTGGCAGCAGGAAGGTCTAGCAGGGCTTCTAGCGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043338.10 ENSMUST00000192185.6 |
||
| 3UTR CCA 72 bp | CCAGCATGGGACTGGACCACATCTGGATCACCAGCATaGGACTGGACCACATCTGGATCACCAGCATGGGAC | + |
|
Preference number: 3 (lower is better) Translates to: PAWDWTTSGSPA*DWTTSGSPAWD Trigger: GTCCCATGCTGGTGATCCAGATGTGGTCCAGTCCCATGCTGGTGATCCAGATGTGGTCCAGTCCCATGCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043338.10 ENSMUST00000192185.6 |
||
| 3UTR CCA 72 bp | CCAGGGCCCACACAAGGAAGCCAGTGCCTTCATCAGTaGCTTCTGCACACCCTCACTGGCAACTTCACAGTC | + |
|
Preference number: 3 (lower is better) Translates to: PGPTQGSQCLHQ*LLHTLTGNFTV Trigger: GACTGTGAAGTTGCCAGTGAGGGTGTGCAGAAGCCACTGATGAAGGCACTGGCTTCCTTGTGTGGGCCCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043338.10 |
||
| 3UTR-3UTR CAA 90 bp | AGGGAGTGTGCCCAGGTGCCCAGGGCCCACACAAGGAAGCCAGTGCCTTCATCAAGGACATTTACAGAATaGTCCACCAGCTTCCGTCCA | + |
|
Preference number: 3 (lower is better) Translates to: RECAQVPRAHTRKPVPSSRTFTE*STSFRP Trigger: TGGACGGAAGCTGGTGGACAATTCTGTAAATGTCCT...TGATGAAGGCACTGGCTTCCTTGTGTGGGCCCTGGGCACCTGGGCACACTCCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043338.10 |
||
| 3UTR GCA 72 bp | AAGGGATGCACTGAGCAGCTGAAAGGGACCACGGGATaGTGGCCATCCTACAGATGCAGACGTAGCTGCCAA | + |
|
Preference number: 3 (lower is better) Translates to: KGCTEQLKGTTG*WPSYRCRRSCQ Trigger: TTGGCAGCTACGTCTGCATCTGTAGGATGGCCAGCATCCCGTGGTCCCTTTCAGCTGCTCAGTGCATCCCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043338.10 ENSMUST00000192185.6 |
||
| 3UTR CCA 72 bp | GACCAGATGAGGTCCCCAACACAAGAACGCTGTGTGTaGTTAGGCACTAGGCTGCAGCATGCCCACCTACAG | + |
|
Preference number: 3 (lower is better) Translates to: DQMRSPTQERCV*LGTRLQHAHLQ Trigger: CTGTAGGTGGGCATGCTGCAGCCTAGTGCCTAACCACACACAGCGTTCTTGTGTTGGGGACCTCATCTGGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043338.10 ENSMUST00000192185.6 |
||
| 3UTR CCA 72 bp | GTCCACCAGCTTCCGTCCACGGTGCTCCCTGCACACTaGCAGTGTGTTATGCAAGACACACAGCAAAGCACT | + |
|
Preference number: 3 (lower is better) Translates to: VHQLPSTVLPAH*QCVMQDTQQST Trigger: AGTGCTTTGCTGTGTGTCTTGCATAACACACTGCCAGTGTGCAGGGAGCACCGTGGACGGAAGCTGGTGGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192185.6 |
||
| 3UTR GCA 72 bp | CAGAATTGTCCACCAGCTTCCGTCCACGGTGCTCCCTaGACACTGGCAGTGTGTTATGCAAGACACACAGCA | + |
|
Preference number: 3 (lower is better) Translates to: QNCPPASVHGAP*TLAVCYARHTA Trigger: TGCTGTGTGTCTTGCATAACACACTGCCAGTGTGCAGGGAGCACCGTGGACGGAAGCTGGTGGACAATTCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192185.6 |
||
| 3UTR CCA 72 bp | GGATGCACTGAGCAGCTGAAAGGGACCACGGGATGCTaGCCATCCTACAGATGCAGACGTAGCTGCCAAAAA | + |
|
Preference number: 3 (lower is better) Translates to: GCTEQLKGTTGC*PSYRCRRSCQK Trigger: TTTTTGGCAGCTACGTCTGCATCTGTAGGATGGCCAGCATCCCGTGGTCCCTTTCAGCTGCTCAGTGCATCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043338.10 ENSMUST00000192185.6 |
||
| 3UTR CCA 72 bp | CACATCTGGATCACCAGCATGGGACTGGACCACATCTaGATCACCAGCATGGGACTGGACCACATCTGGATC | + |
|
Preference number: 3 (lower is better) Translates to: HIWITSMGLDHI*ITSMGLDHIWI Trigger: GATCCAGATGTGGTCCAGTCCCATGCTGGTGATCCAGATGTGGTCCAGTCCCATGCTGGTGATCCAGATGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043338.10 ENSMUST00000192185.6 |
||
| 3UTR CCA 72 bp | GGTTGGACCAGCCAAGGGGATCCGAAGCTACTCTCCTaGTCCAGAAGGCACAATGGTGTTCTCAGTGAAGCA | + |
|
Preference number: 3 (lower is better) Translates to: GWTSQGDPKLLS*SRRHNGVLSEA Trigger: TGCTTCACTGAGAACACCATTGTGCCTTCTGGACCAGGAGAGTAGCTTCGGATCCCCTTGGCTGGTCCAACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043338.10 ENSMUST00000192185.6 |
||
| 3UTR TCA 72 bp | CAGGGTACTAATGATGCAAGGGATGCACTGAGCAGCTaGAAGGGACCACGGGATGCTGGCCATCCTACAGAT | + |
|
Preference number: 3 (lower is better) Translates to: QGTNDARDALSS*KGPRDAGHPTD Trigger: ATCTGTAGGATGGCCAGCATCCCGTGGTCCCTTTCAGCTGCTCAGTGCATCCCTTGCATCATTAGTACCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043338.10 ENSMUST00000192185.6 |
||
| 3UTR TCA 72 bp | GCCCTTGATGCATTCTCTTCCACCGGCATCCTCCAGTaGGCCAGCAGGACTTGTCAGCCCACTATTAGGAAA | + |
|
Preference number: 3 (lower is better) Translates to: ALDAFSSTGILQ*ASRTCQPTIRK Trigger: TTTCCTAATAGTGGGCTGACAAGTCCTGCTGGCTCACTGGAGGATGCCGGTGGAAGAGAATGCATCAAGGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043338.10 ENSMUST00000192185.6 |
||
| 3UTR TCA 72 bp | AAACCAGCCTGGCTGAGGACCACACTGCCTCTACAGTaGTCACTCAACAGTCCCCATTGGTTGGCAACACAG | + |
|
Preference number: 3 (lower is better) Translates to: KPAWLRTTLPLQ*SLNSPHWLATQ Trigger: CTGTGTTGCCAACCAATGGGGACTGTTGAGTGATCACTGTAGAGGCAGTGTGGTCCTCAGCCAGGCTGGTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043338.10 ENSMUST00000192185.6 |
||
| 3UTR GCA 72 bp | CTGCCACCTGGGAATCAGTTGCTCCTGAGGCTGATCTaGTGCTACCAGACAAAGCTGCTCTGTGAGAAGTCA | + |
|
Preference number: 3 (lower is better) Translates to: LPPGNQLLLRLI*CYQTKLLCEKS Trigger: TGACTTCTCACAGAGCAGCTTTGTCTGGTAGCAGCAGATCAGCCTCAGGAGCAACTGATTCCCAGGTGGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043338.10 ENSMUST00000192185.6 |
||
| 3UTR GCA 72 bp | CAACAGTCCCCATTGGTTGGCAACACAGGGATGCCCTaGTCCATGGGTGTGAATGGGGAAGAATTGAGGGTA | + |
|
Preference number: 3 (lower is better) Translates to: QQSPLVGNTGMP*SMGVNGEELRV Trigger: TACCCTCAATTCTTCCCCATTCACACCCATGGAGCAGGGCATCCCTGTGTTGCCAACCAATGGGGACTGTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043338.10 ENSMUST00000192185.6 |
||
| 3UTR GCA 72 bp | TCGACTGACCAATTCATTCCACCAAGTCTCATCCCGTaGACGGCAAAACCTGTCACTCACGGGGATCCCAAC | + |
|
Preference number: 3 (lower is better) Translates to: STDQFIPPSLIP*TAKPVTHGDPN Trigger: GTTGGGATCCCCGTGAGTGACAGGTTTTGCCGTGCACGGGATGAGACTTGGTGGAATGAATTGGTCAGTCGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043338.10 ENSMUST00000192185.6 |
||
| 3UTR CCA 72 bp | TGCCTCTACAGTGATCACTCAACAGTCCCCATTGGTTaGCAACACAGGGATGCCCTGCTCCATGGGTGTGAA | + |
|
Preference number: 3 (lower is better) Translates to: CLYSDHSTVPIG*QHRDALLHGCE Trigger: TTCACACCCATGGAGCAGGGCATCCCTGTGTTGCCAACCAATGGGGACTGTTGAGTGATCACTGTAGAGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043338.10 ENSMUST00000192185.6 |
||
| 3UTR-3UTR CAA 90 bp | CAAGGGGATCCGAAGCTACTCTCCTGGTCCAGAAGGCACAATGGTGTTCTCAGTGAGCATTTAGGTTGCTaGGCAGGCATGCCTTCTTGC | + |
|
Preference number: 3 (lower is better) Translates to: QGDPKLLSWSRRHNGVLSEHLGC*AGMPSC Trigger: GCAAGAAGGCATGCCTGCCAAGCAACCTAAATGCTC...ACTGAGAACACCATTGTGCCTTCTGGACCAGGAGAGTAGCTTCGGATCCCCTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043338.10 ENSMUST00000192185.6 |
||
| 3UTR-3UTR CAA 90 bp | CACAAAGTCACCATGAGAGAAACAGACACCCAAGCACTGAAAAGGCCAAGCTGGATGCGCCCCAAGCCCTaGATGCATTCTCTTCCACCG | + |
|
Preference number: 3 (lower is better) Translates to: HKVTMRETDTQALKRPSWMRPKP*MHSLPP Trigger: CGGTGGAAGAGAATGCATCAAGGGCTTGGGGCGCAT...CCAGCTTGGCCTTTTCAGTGCTTGGGTGTCTGTTTCTCTCATGGTGACTTTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043338.10 ENSMUST00000192185.6 |
||
| 3UTR TCA 72 bp | CAATGGCCGTTCTCACATCTGAGCCCTTCTGAGCCCTaGACTGATTCCCAAGGCTTCTGGGACATGAATGTG | + |
|
Preference number: 3 (lower is better) Translates to: QWPFSHLSPSEP*TDSQGFWDMNV Trigger: CACATTCATGTCCCAGAAGCCTTGGGAATCAGTTCAGGGCTCAGAAGGGCTCAGATGTGAGAACGGCCATTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043338.10 ENSMUST00000192185.6 |
||
| 3UTR TCA 72 bp | AGGAAAGGAAATCCACAGCCATGGGTGCACCTCGACTaGCCAATTCATTCCACCAAGTCTCATCCCGTGCAC | + |
|
Preference number: 3 (lower is better) Translates to: RKGNPQPWVHLD*PIHSTKSHPVH Trigger: GTGCACGGGATGAGACTTGGTGGAATGAATTGGTCAGTCGAGGTGCACCCATGGCTGTGGATTTCCTTTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043338.10 |
||
| 3UTR GCA 72 bp | GTGAGGGGCAAATCTTCAAAATTCTGTACTTCCTGCTaGTCCGCTAGAAGCCCTGCTAGACCTTCCTGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: VRGKSSKFCTSC*SARSPARPSCC Trigger: GCAGCAGGAAGGTCTAGCAGGGCTTCTAGCGGAGCAGCAGGAAGTACAGAATTTTGAAGATTTGCCCCTCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043338.10 ENSMUST00000192185.6 |
||
| 3UTR GCA 72 bp | CTGGTGAGGGGCAAATCTTCAAAATTCTGTACTTCCTaGTGCTCCGCTAGAAGCCCTGCTAGACCTTCCTGC | + |
|
Preference number: 3 (lower is better) Translates to: LVRGKSSKFCTS*CSARSPARPSC Trigger: GCAGGAAGGTCTAGCAGGGCTTCTAGCGGAGCAGCAGGAAGTACAGAATTTTGAAGATTTGCCCCTCACCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043338.10 ENSMUST00000192185.6 |
||
| 3UTR GCA 72 bp | AGAATCACTTGTTCTCAAACAGCAGGGAAGACGCTGTaGAGGGACTGTGGCAATGGTTTTCCTGGTGAGGGG | + |
|
Preference number: 3 (lower is better) Translates to: RITCSQTAGKTL*RDCGNGFPGEG Trigger: CCCCTCACCAGGAAAACCATTGCCACAGTCCCTGCACAGCGTCTTCCCTGCTGTTTGAGAACAAGTGATTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043338.10 ENSMUST00000192185.6 |
||
| 3UTR CCA 72 bp | AAGGAACAATGTATCCCGGGCAGGCTCTCCAGGGTCTaGGCAGAATCACTTGTTCTCAAACAGCAGGGAAGA | + |
|
Preference number: 3 (lower is better) Translates to: KEQCIPGRLSRV*AESLVLKQQGR Trigger: TCTTCCCTGCTGTTTGAGAACAAGTGATTCTGCCCAGACCCTGGAGAGCCTGCCCGGGATACATTGTTCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043338.10 ENSMUST00000192185.6 |
||
| 3UTR CCA 72 bp | AGAGAAACAGACACCCAAGCACTGAAAAGGCCAAGCTaGGGATGCATCTCACCCTTCCCCAAGACAAGATGC | + |
|
Preference number: 3 (lower is better) Translates to: RETDTQALKRPS*GCISPFPKTRC Trigger: GCATCTTGTCTTGGGGAAGGGTGAGATGCATCCCCAGCTTGGCCTTTTCAGTGCTTGGGTGTCTGTTTCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043338.10 ENSMUST00000192185.6 |
||
| 3UTR-3UTR CAA 90 bp | GCCACCTGGGAATCAGTTGCTCCTGAGGCTGATCTGCTGCTACCAGACAAAGCTTCAAAAATGTCCAAATaGCAAGCCACACACCGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: ATWESVAPEADLLLPDKASKMSK*QATHRC Trigger: GCAGCGGTGTGTGGCTTGCAATTTGGACATTTTTGA...AGCTTTGTCTGGTAGCAGCAGATCAGCCTCAGGAGCAACTGATTCCCAGGTGGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043338.10 ENSMUST00000192185.6 |
||
| 3UTR TCA 72 bp | GGTTTCCCTAAATTTCCCAATGGCCGTTCTCACATCTaGGCCCTTCTGAGCCCTGAACTGATTCCCAAGGCT | + |
|
Preference number: 3 (lower is better) Translates to: GFPKFPNGRSHI*ALLSPELIPKA Trigger: AGCCTTGGGAATCAGTTCAGGGCTCAGAAGGGCTCAGATGTGAGAACGGCCATTGGGAAATTTAGGGAAACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043338.10 ENSMUST00000192185.6 |
||
| 3UTR TCA 72 bp | ACCACCCTCACTGAGGCCCCTGCTCCTGGGAGTTTCTaGGACCACTACTACTTTATGATGAAGGCAGTTATC | + |
|
Preference number: 3 (lower is better) Translates to: TTLTEAPAPGSF*DHYYFMMKAVI Trigger: GATAACTGCCTTCATCATAAAGTAGTAGTGGTCTCAGAAACTCCCAGGAGCAGGGGCCTCAGTGAGGGTGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043338.10 ENSMUST00000192185.6 |
||
| 3UTR GCA 72 bp | ACTATTCCCACAGGCAACCCTCAAAAATGTCCAAATTaGAAGCCACACACCGCTGCAAGCAGAAGGCACGTG | + |
|
Preference number: 3 (lower is better) Translates to: TIPTGNPQKCPN*KPHTAASRRHV Trigger: CACGTGCCTTCTGCTTGCAGCGGTGTGTGGCTTGCAATTTGGACATTTTTGAGGGTTGCCTGTGGGAATAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043338.10 ENSMUST00000192185.6 |
||
| 3UTR GCA 72 bp | AGGGTGCACAAAGGAAAGGAAATCCACAGCCATGGGTaGACCTCGACTGACCAATTCATTCCACCAAGTCTC | + |
|
Preference number: 3 (lower is better) Translates to: RVHKGKEIHSHG*TSTDQFIPPSL Trigger: GAGACTTGGTGGAATGAATTGGTCAGTCGAGGTGCACCCATGGCTGTGGATTTCCTTTCCTTTGTGCACCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043338.10 |
||
| 3UTR GCA 72 bp | GGTTTCAGATCAGCCAGTTTGCAGAAAGCCACTCTGTaGATCCCGAGTCTACCTTGTCAGTTACCAGCTCCT | + |
|
Preference number: 3 (lower is better) Translates to: GFRSASLQKATL*IPSLPCQLPAP Trigger: AGGAGCTGGTAACTGACAAGGTAGACTCGGGATGCACAGAGTGGCTTTCTGCAAACTGGCTGATCTGAAACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043338.10 |
||
| 3UTR GCA 72 bp | CCACACAAGGAAGCCAGTGCCTTCATCAGTGGCTTCTaGACACCCTCACTGGCAACTTCACAGTCAGAATTA | + |
|
Preference number: 3 (lower is better) Translates to: PHKEASAFISGF*TPSLATSQSEL Trigger: TAATTCTGACTGTGAAGTTGCCAGTGAGGGTGTGCAGAAGCCACTGATGAAGGCACTGGCTTCCTTGTGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043338.10 |
||
| 3UTR GCA 72 bp | ACATTTACAGAATTGTCCACCAGCTTCCGTCCACGGTaGTCCCTGCACACTGGCAGTGTGTTATGCAAGACA | + |
|
Preference number: 3 (lower is better) Translates to: TFTELSTSFRPR*SLHTGSVLCKT Trigger: TGTCTTGCATAACACACTGCCAGTGTGCAGGGAGCACCGTGGACGGAAGCTGGTGGACAATTCTGTAAATGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192185.6 |
||
| 3UTR CCA 72 bp | CCAGTGCCTTCATCAGTGGCTTCTGCACACCCTCACTaGCAACTTCACAGTCAGAATTACAAAGGACGGAGT | + |
|
Preference number: 3 (lower is better) Translates to: PVPSSVASAHPH*QLHSQNYKGRS Trigger: ACTCCGTCCTTTGTAATTCTGACTGTGAAGTTGCCAGTGAGGGTGTGCAGAAGCCACTGATGAAGGCACTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043338.10 |
||
| 3UTR TCA 72 bp | AGCCACACACCGCTGCAAGCAGAAGGCACGTGTCTGTaGGACAGAGGTTTAGAGGACATTTACAGAATTGTC | + |
|
Preference number: 3 (lower is better) Translates to: SHTPLQAEGTCL*DRGLEDIYRIV Trigger: GACAATTCTGTAAATGTCCTCTAAACCTCTGTCTCACAGACACGTGCCTTCTGCTTGCAGCGGTGTGTGGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043338.10 ENSMUST00000192185.6 |
||
| 3UTR TCA 72 bp | GATGAAAGGAACAGTTATGAGAGACGACAGACGCTCTaGGGAGAGCCATGCCAGGAGACTCAGTGTCAAAAC | + |
|
Preference number: 3 (lower is better) Translates to: DERNSYERRQTL*GEPCQETQCQN Trigger: GTTTTGACACTGAGTCTCCTGGCATGGCTCTCCTCAGAGCGTCTGTCGTCTCTCATAACTGTTCCTTTCATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043338.10 ENSMUST00000192185.6 |
||
| 3UTR TCA 72 bp | GATGCCTTCAACAGCATGGCTGGAATCTGGAAAGACTaGGCTCCCTTCTGCCCTAATTCTGATCAGCCTATC | + |
|
Preference number: 3 (lower is better) Translates to: DAFNSMAGIWKD*APFCPNSDQPI Trigger: GATAGGCTGATCAGAATTAGGGCAGAAGGGAGCTCAGTCTTTCCAGATTCCAGCCATGCTGTTGAAGGCATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043338.10 ENSMUST00000192185.6 |
||
| 3UTR CCA 72 bp | CTCTTCATCCTTGCTATACCATCTTTAAAAGATACCTaGGCTCAAGCCCAGTCCCTGACAAGGGCACGGAGA | + |
|
Preference number: 3 (lower is better) Translates to: LFILAIPSLKDT*AQAQSLTRARR Trigger: TCTCCGTGCCCTTGTCAGGGACTGGGCTTGAGCCCAGGTATCTTTTAAAGATGGTATAGCAAGGATGAAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043338.10 ENSMUST00000192185.6 |
||
| 3UTR CCA 72 bp | GCTAATTTCAAATGTCTCCCACAGTCACAGCAGGGCTaGAAATACTCAAAGCAGAACACTCCACCCCGAGCA | + |
|
Preference number: 3 (lower is better) Translates to: ANFKCLPQSQQG*KYSKQNTPPRA Trigger: TGCTCGGGGTGGAGTGTTCTGCTTTGAGTATTTCCAGCCCTGCTGTGACTGTGGGAGACATTTGAAATTAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043338.10 |
||
| 3UTR TCA 72 bp | AGCAGGAGAGACAAAAGCTGCCTTAGGCTTGATCTGTaGAAAGGGACAGTGAGAGACAGGATTCAGTGGACA | + |
|
Preference number: 3 (lower is better) Translates to: SRRDKSCLRLDL*KGTVRDRIQWT Trigger: TGTCCACTGAATCCTGTCTCTCACTGTCCCTTTTCACAGATCAAGCCTAAGGCAGCTTTTGTCTCTCCTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043338.10 ENSMUST00000192185.6 |
||
| 3UTR CCA 72 bp | CACATCTGGATCACCAGCATGGGACTGGACCACATCTaGATCTGCTTATTTTCTAAGCCCATGTTCACACTG | + |
|
Preference number: 3 (lower is better) Translates to: HIWITSMGLDHI*ICLFSKPMFTL Trigger: CAGTGTGAACATGGGCTTAGAAAATAAGCAGATCCAGATGTGGTCCAGTCCCATGCTGGTGATCCAGATGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043338.10 ENSMUST00000192185.6 |
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| 3UTR GCA 72 bp | TGGATCACCAGCATGGGACTGGACCACATCTGGATCTaGTTATTTTCTAAGCCCATGTTCACACTGTTATGC | + |
|
Preference number: 3 (lower is better) Translates to: WITSMGLDHIWI*LFSKPMFTLLC Trigger: GCATAACAGTGTGAACATGGGCTTAGAAAATAAGCAGATCCAGATGTGGTCCAGTCCCATGCTGGTGATCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043338.10 ENSMUST00000192185.6 |
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| 3UTR-3UTR CAA 90 bp | AAATCAGAAAAGGTACAGGCCAGGAGGATGAAAGGAACAGTTATGAGAGACGACAGGACATTTACAGAATaGTCCACCAGCTTCCGTCCA | + |
|
Preference number: 3 (lower is better) Translates to: KSEKVQARRMKGTVMRDDRTFTE*STSFRP Trigger: TGGACGGAAGCTGGTGGACAATTCTGTAAATGTCCT...GTCGTCTCTCATAACTGTTCCTTTCATCCTCCTGGCCTGTACCTTTTCTGATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043338.10 ENSMUST00000192185.6 |
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| 3UTR-3UTR CAA 90 bp | TTATATGAAGGAAGGCTCTGCCACCAGCTAATTTCAAATGTCTCCCACAGTCACTCAAAAATGTCCAAATaGCAAGCCACACACCGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: LYEGRLCHQLISNVSHSHSKMSK*QATHRC Trigger: GCAGCGGTGTGTGGCTTGCAATTTGGACATTTTTGA...GTGACTGTGGGAGACATTTGAAATTAGCTGGTGGCAGAGCCTTCCTTCATATAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043338.10 |
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| 3UTR GCA 72 bp | AAGACACACAGCAAAGCACTTCTTCACGGCATCCCTTaGATACGGTATATAGGAAAGGCTATACCACGTCAA | + |
|
Preference number: 3 (lower is better) Translates to: KTHSKALLHGIP*IRYIGKAIPRQ Trigger: TTGACGTGGTATAGCCTTTCCTATATACCGTATGCAAGGGATGCCGTGAAGAAGTGCTTTGCTGTGTGTCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000192185.6 ENSMUST00000192565.2 |
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| 3UTR-3UTR CAA 90 bp | ACTAAGTTGCTTTTAATCAATACTACTGGCTTGGTAGGAGACTTTAGCAGATATCCACCTGGGAATCAGTaGCTCCTGAGGCTGATCTGC | + |
|
Preference number: 3 (lower is better) Translates to: TKLLLINTTGLVGDFSRYPPGNQ*LLRLIC Trigger: GCAGATCAGCCTCAGGAGCAACTGATTCCCAGGTGG...ATATCTGCTAAAGTCTCCTACCAAGCCAGTAGTATTGATTAAAAGCAACTTAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043338.10 ENSMUST00000192185.6 |
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| 3UTR TCA 72 bp | GTGCATCCCGAGTCTACCTTGTCAGTTACCAGCTCCTaGCAGAATGTATCTGACTTGATATTGTCAGCTTAT | + |
|
Preference number: 3 (lower is better) Translates to: VHPESTLSVTSS*QNVSDLILSAY Trigger: ATAAGCTGACAATATCAAGTCAGATACATTCTGTCAGGAGCTGGTAACTGACAAGGTAGACTCGGGATGCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043338.10 |
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| 3UTR TCA 72 bp | ACCACGTCAAGGCCAAAGACTGCAAAATACAGAAGATaGGTGCAAGTCCCTTATTCCACAAAAAGGCAGAAC | + |
|
Preference number: 3 (lower is better) Translates to: TTSRPKTAKYRR*VQVPYSTKRQN Trigger: GTTCTGCCTTTTTGTGGAATAAGGGACTTGCACTCATCTTCTGTATTTTGCAGTCTTTGGCCTTGACGTGGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000192185.6 ENSMUST00000192565.2 |
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| 3UTR GCA 72 bp | CAGTCAGAATTACAAAGGACGGAGTCCAGGGAGGCTTaGTTTGTTTACCTTGCCTTCCTTATTCAAGGTAAA | + |
|
Preference number: 3 (lower is better) Translates to: QSELQRTESREA*FVYLAFLIQGK Trigger: TTTACCTTGAATAAGGAAGGCAAGGTAAACAAAGCAAGCCTCCCTGGACTCCGTCCTTTGTAATTCTGACTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043338.10 |
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| 3UTR GCA 72 bp | CTAAGCCCATGTTCACACTGTTATGCTCTTCATCCTTaGTATACCATCTTTAAAAGATACCTGGGCTCAAGC | + |
|
Preference number: 3 (lower is better) Translates to: LSPCSHCYALHP*YTIFKRYLGSS Trigger: GCTTGAGCCCAGGTATCTTTTAAAGATGGTATAGCAAGGATGAAGAGCATAACAGTGTGAACATGGGCTTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043338.10 ENSMUST00000192185.6 |
||
| 3UTR TCA 72 bp | TACCTTGTCAGTTACCAGCTCCTGACAGAATGTATCTaGCTTGATATTGTCAGCTTATATGAAGGAAGGCTC | + |
|
Preference number: 3 (lower is better) Translates to: YLVSYQLLTECI*LDIVSLYEGRL Trigger: GAGCCTTCCTTCATATAAGCTGACAATATCAAGTCAGATACATTCTGTCAGGAGCTGGTAACTGACAAGGTA 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043338.10 |
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| 3UTR GCA 72 bp | AGTCTGGAAGATTCTGGAAGACAGTCATCCAAAAACTaGTTAAATGTGTCCAGACACAAACTGTTGAAGCAA | + |
|
Preference number: 3 (lower is better) Translates to: SLEDSGRQSSKN*LNVSRHKLLKQ Trigger: TTGCTTCAACAGTTTGTGTCTGGACACATTTAAGCAGTTTTTGGATGACTGTCTTCCAGAATCTTCCAGACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043338.10 ENSMUST00000192185.6 |
||
| CDS-3UTR CCA 90 bp | TCAAACATGCGCTTCAGCTGCTTCAGCGGCCCCATGAGGAAGACGGTAACACGCTGGGGAGCAGAGACGTaGGCAGGGCGGCAGACAGAG | + |
|
Preference number: 4 (lower is better) Translates to: SNMRFSCFSGPMRKTVTRWGAET*AGRQTE Trigger: CTCTGTCTGCCGCCCTGCCCACGTCTCTGCTCCCCA...GCGTGTTACCGTCTTCCTCATGGGGCCGCTGAAGCAGCTGAAGCGCATGTTTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000192565.2 |
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| CDS-3UTR CCA 90 bp | CTCAAACATGCGCTTCAGCTGCTTCAGCGGCCCCATGAGGAAGACGGTAACACGGGCCGAGTCCCTTCCTaGGCACCCACAGCAGAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: LKHALQLLQRPHEEDGNTGRVPS*APTAEE Trigger: CTCTTCTGCTGTGGGTGCCCAGGAAGGGACTCGGCC...CGTGTTACCGTCTTCCTCATGGGGCCGCTGAAGCAGCTGAAGCGCATGTTTGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192565.2 |
||
| 3UTR CAA 72 bp | TCCCGGGCAGGCTCTCCAGGGTCTGGGCAGAATCACTaGTTCTCAAACAGCAGGGAAGACGCTGTGCAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: SRAGSPGSGQNH*FSNSREDAVQG Trigger: TCCCTGCACAGCGTCTTCCCTGCTGTTTGAGAACAAGTGATTCTGCCCAGACCCTGGAGAGCCTGCCCGGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043338.10 ENSMUST00000192185.6 |
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| CDS-3UTR CCA 90 bp | GAATATGCTAGACAAACTGACAGGCAGGCACCCATCCTGTCACCTTTAGCACTCGGCCGAGTCCCTTCCTaGGCACCCACAGCAGAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: EYARQTDRQAPILSPLALGRVPS*APTAEE Trigger: CTCTTCTGCTGTGGGTGCCCAGGAAGGGACTCGGCC...GAGTGCTAAAGGTGACAGGATGGGTGCCTGCCTGTCAGTTTGTCTAGCATATTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043338.10 |
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| 3UTR CAA 72 bp | CACACTGCCTCTACAGTGATCACTCAACAGTCCCCATaGGTTGGCAACACAGGGATGCCCTGCTCCATGGGT | + |
|
Preference number: 4 (lower is better) Translates to: HTASTVITQQSP*VGNTGMPCSMG Trigger: ACCCATGGAGCAGGGCATCCCTGTGTTGCCAACCAATGGGGACTGTTGAGTGATCACTGTAGAGGCAGTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043338.10 ENSMUST00000192185.6 |
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| CDS-3UTR GCA 90 bp | TGCATTCTCTTCCACCGGCATCCTCCAGTGAGCCAGCAGGACTTGTCAGCCCACAGAACACAGGGTAAGTaGAAAACACAGCAGCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: CILFHRHPPVSQQDLSAHRTQGK*KTQQHQ Trigger: CTGGTGCTGCTGTGTTTTGCACTTACCCTGTGTTCT...GTGGGCTGACAAGTCCTGCTGGCTCACTGGAGGATGCCGGTGGAAGAGAATGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043338.10 |
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| CDS-3UTR TCA 90 bp | CAAGACACACAGCAAAGCACTTCTTCACGGCATCCCTTGCATACGGTATATAGGAAGAGTCCCCAGCACTaGGCACAGGATTCCCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: QDTQQSTSSRHPLHTVYRKSPQH*AQDSQS Trigger: GCTCTGGGAATCCTGTGCTCAGTGCTGGGGACTCTT...CCTATATACCGTATGCAAGGGATGCCGTGAAGAAGTGCTTTGCTGTGTGTCTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192565.2 |
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| CDS-3UTR TCA 90 bp | GCTCTTCATCCTTGCTATACCATCTTTAAAAGATACCTGGGCTCAAGCCCAGTCAAGAGTCCCCAGCACTaGGCACAGGATTCCCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: ALHPCYTIFKRYLGSSPVKSPQH*AQDSQS Trigger: GCTCTGGGAATCCTGTGCTCAGTGCTGGGGACTCTT...GACTGGGCTTGAGCCCAGGTATCTTTTAAAGATGGTATAGCAAGGATGAAGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043338.10 |
||
| 3UTR CAA 72 bp | GACTATTCCCACAGGCAACCCTCAAAAATGTCCAAATaGCAAGCCACACACCGCTGCAAGCAGAAGGCACGT | + |
|
Preference number: 4 (lower is better) Translates to: DYSHRQPSKMSK*QATHRCKQKAR Trigger: ACGTGCCTTCTGCTTGCAGCGGTGTGTGGCTTGCAATTTGGACATTTTTGAGGGTTGCCTGTGGGAATAGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043338.10 ENSMUST00000192185.6 |
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| 3UTR CAA 72 bp | CTGGGCCTATTTTTCTCTGGTTTCAGATCAGCCAGTTaGCAGAAAGCCACTCTGTGCATCCCGAGTCTACCT | + |
|
Preference number: 4 (lower is better) Translates to: LGLFFSGFRSAS*QKATLCIPSLP Trigger: AGGTAGACTCGGGATGCACAGAGTGGCTTTCTGCAAACTGGCTGATCTGAAACCAGAGAAAAATAGGCCCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043338.10 |
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| 3UTR CAA 72 bp | TCTAAAGGCATACAAATCCACCACCGGCATTTGAATTaGGTTTTACTCCCAGGGAGTGTGCCCAGGTGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: SKGIQIHHRHLN*VLLPGSVPRCP Trigger: TGGGCACCTGGGCACACTCCCTGGGAGTAAAACCAAATTCAAATGCCGGTGGTGGATTTGTATGCCTTTAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043338.10 |
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| CDS-3UTR TCA 90 bp | ACTGGCAGTGTGTTATGCAAGACACACAGCAAAGCACTTCTTCACGGCATCCCTATTCCACCTCCCAATTaGCATGATGTTACCCAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: TGSVLCKTHSKALLHGIPIPPPN*HDVTQG Trigger: ACCCTGGGTAACATCATGTCAATTGGGAGGTGGAAT...AGGGATGCCGTGAAGAAGTGCTTTGCTGTGTGTCTTGCATAACACACTGCCAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192565.2 |
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| CDS-3UTR TCA 90 bp | CTGCAAAATACAGAAGATGAGTGCAAGTCCCTTATTCCACAAAAAGGCAGAACAACAGAGAGCACGGCCTaGGAAGCAGCATGGGGATGC | + |
|
Preference number: 4 (lower is better) Translates to: LQNTEDECKSLIPQKGRTTESTA*EAAWGC Trigger: GCATCCCCATGCTGCTTCTCAGGCCGTGCTCTCTGT...TGTTCTGCCTTTTTGTGGAATAAGGGACTTGCACTCATCTTCTGTATTTTGCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000192565.2 |
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| CDS-3UTR TCA 90 bp | AAAGGAACAGTTATGAGAGACGACAGACGCTCTGAGGAGAGCCATGCCAGGAGAGCAAAATACAGAAGATaGGTGCAAGTCCCTTATTCC | + |
|
Preference number: 4 (lower is better) Translates to: KGTVMRDDRRSEESHARRAKYRR*VQVPYS Trigger: GGAATAAGGGACTTGCACTCATCTTCTGTATTTTGC...TCTCCTGGCATGGCTCTCCTCAGAGCGTCTGTCGTCTCTCATAACTGTTCCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043338.10 |
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| CDS-3UTR GCA 90 bp | CTACTCTCCTGGTCCAGAAGGCACAATGGTGTTCTCAGTGAAGCACTCCAGACTGTCAAGGCCAAAGACTaGAAAATACAGAAGATGAGT | + |
|
Preference number: 4 (lower is better) Translates to: LLSWSRRHNGVLSEALQTVKAKD*KIQKMS Trigger: ACTCATCTTCTGTATTTTGCAGTCTTTGGCCTTGAC...AGTCTGGAGTGCTTCACTGAGAACACCATTGTGCCTTCTGGACCAGGAGAGTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043338.10 |
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| 3UTR CAA 72 bp | CAAGACACACAGCAAAGCACTTCTTCACGGCATCCCTaGCATACGGTATATAGGAAAGGCTATACCACGTCA | + |
|
Preference number: 4 (lower is better) Translates to: QDTQQSTSSRHP*HTVYRKGYTTS Trigger: TGACGTGGTATAGCCTTTCCTATATACCGTATGCAAGGGATGCCGTGAAGAAGTGCTTTGCTGTGTGTCTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000192185.6 ENSMUST00000192565.2 |
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| 3UTR CAA 72 bp | CAGAATTACAAAGGACGGAGTCCAGGGAGGCTTGCTTaGTTTACCTTGCCTTCCTTATTCAAGGTAAAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: QNYKGRSPGRLA*FTLPSLFKVKQ Trigger: TTGCTTTACCTTGAATAAGGAAGGCAAGGTAAACAAAGCAAGCCTCCCTGGACTCCGTCCTTTGTAATTCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043338.10 |
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| CDS-3UTR GCA 90 bp | GTCAGCTTATATGAAGGAAGGCTCTGCCACCAGCTAATTTCAAATGTCTCCCACAATACAGAAGATGAGTaGAAGTCCCTTATTCCACAA | + |
|
Preference number: 4 (lower is better) Translates to: VSLYEGRLCHQLISNVSHNTEDE*KSLIPQ Trigger: TTGTGGAATAAGGGACTTGCACTCATCTTCTGTATT...GTGGGAGACATTTGAAATTAGCTGGTGGCAGAGCCTTCCTTCATATAAGCTGAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043338.10 |
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| 3UTR CAA 72 bp | AGCCATGTGCATGGGTCCAAACACCAGACTTGGTCTTaGATTATTATTATTATTATTTTAAAGATAGGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: SHVHGSKHQTWS*IIIIIILKIGS Trigger: GGACCCTATCTTTAAAATAATAATAATAATAATCAAAGACCAAGTCTGGTGTTTGGACCCATGCACATGGCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043338.10 |
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| 3UTR CAA 72 bp | CAGATGGAGCCATGTGCATGGGTCCAAACACCAGACTaGGTCTTTGATTATTATTATTATTATTTTAAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: QMEPCAWVQTPD*VFDYYYYYFKD Trigger: ATCTTTAAAATAATAATAATAATAATCAAAGACCAAGTCTGGTGTTTGGACCCATGCACATGGCTCCATCTG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043338.10 |
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| CDS GCA 90 bp | TGCCCCAGCTCAGCGACGACGCCTCCACAACCTCGGACAGACCGCTaGGGTCCTCGGTGTCCTGGCCGCTCAGAACTTTCTTCAGCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: CPSSATTPPQPRTDR*GPRCPGRSELSSAC Trigger: ACAAGCTGAAGAAAGTTCTGAGCGGCCAGGACACCGAGGACCGCAGCGGTCTGTCCGAGGTTGTGGAGGCGTCGTCGCTGAGCTGGGGCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043338.10 ENSMUST00000192185.6 ENSMUST00000192565.2 |
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| CDS TCA 90 bp | TGGGGAGCAGAGACGTGGGCAGGGCGGCAGACAGAGAGCACGGCCTaGGAAGCAGCATGGGGATGCTTAGAGATATTCCAGCAGCGCGGT | + |
|
Preference number: 5 (lower is better) Translates to: WGAETWAGRQTESTA*EAAWGCLEIFQQRG Trigger: ACCGCGCTGCTGGAATATCTCTAAGCATCCCCATGCTGCTTCTCAGGCCGTGCTCTCTGTCTGCCGCCCTGCCCACGTCTCTGCTCCCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000192565.2 |
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| CDS GCA 90 bp | AGAATTGTGGCGATGAGACGCGTAGGCTCAAACATGCGCTTCAGCTaGTTCAGCGGCCCCATGAGGAAGACGGTACTCCCAATTGACATG | + |
|
Preference number: 5 (lower is better) Translates to: RIVAMRRVGSNMRFS*FSGPMRKTVLPIDM Trigger: CATGTCAATTGGGAGTACCGTCTTCCTCATGGGGCCGCTGAAGCAGCTGAAGCGCATGTTTGAGCCTACGCGTCTCATCGCCACAATTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043338.10 |
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| CDS TCA 90 bp | GAGATATTCCAGCAGCGCGGTTTGGATTCCACCTCCCAATTGACATaGTGTTACCCAGGGTGTAAAACACTGCAAAGAGGCCGAGTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: EIFQQRGLDSTSQLT*CYPGCKTLQRGRVP Trigger: AGGGACTCGGCCTCTTTGCAGTGTTTTACACCCTGGGTAACATCATGTCAATTGGGAGGTGGAATCCAAACCGCGCTGCTGGAATATCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192565.2 |
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| CDS-3UTR CAA 90 bp | CGGTATATAGGAAAGGCTATACCACGTCAAGGCCAAAGACTGCAAAATACAGAATTCCAGCAGCGCGGTTaGGATTCCACCTCCCAATTG | + |
|
Preference number: 5 (lower is better) Translates to: RYIGKAIPRQGQRLQNTEFQQRG*DSTSQL Trigger: CAATTGGGAGGTGGAATCCAAACCGCGCTGCTGGAA...TTCTGTATTTTGCAGTCTTTGGCCTTGACGTGGTATAGCCTTTCCTATATACCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192565.2 |
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| CDS GCA 72 bp | TCAGCGACGACGCCTCCACAACCTCGGACAGACCGCTaGGGTCCTCGGTGTCCTGGCCGCTCAGAACTTTCT | + |
|
Preference number: 6 (lower is better) Translates to: SATTPPQPRTDR*GPRCPGRSELS Trigger: AGAAAGTTCTGAGCGGCCAGGACACCGAGGACCGCAGCGGTCTGTCCGAGGTTGTGGAGGCGTCGTCGCTGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043338.10 ENSMUST00000192185.6 ENSMUST00000192565.2 |
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| CDS GCA 72 bp | GCGATGAGACGCGTAGGCTCAAACATGCGCTTCAGCTaGTTCAGCGGCCCCATGAGGAAGACGGTACTCCCA | + |
|
Preference number: 6 (lower is better) Translates to: AMRRVGSNMRFS*FSGPMRKTVLP Trigger: TGGGAGTACCGTCTTCCTCATGGGGCCGCTGAAGCAGCTGAAGCGCATGTTTGAGCCTACGCGTCTCATCGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043338.10 |
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| CDS TCA 72 bp | CAGCAGCGCGGTTTGGATTCCACCTCCCAATTGACATaGTGTTACCCAGGGTGTAAAACACTGCAAAGAGGC | + |
|
Preference number: 6 (lower is better) Translates to: QQRGLDSTSQLT*CYPGCKTLQRG Trigger: GCCTCTTTGCAGTGTTTTACACCCTGGGTAACATCATGTCAATTGGGAGGTGGAATCCAAACCGCGCTGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192565.2 |
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