Pregenerated sensors for SFRP5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000018822Ensembl transcript IDs: ENSMUST00000018966.8
Found 67 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCCCACAGCAGTAGCAATAATTTATCGTCGTTGGGATACAGGGATTaGGGAGGCAGAGCAAGAGCCAGGGAGCAAGGCTGTGTGGCAGTG | + |
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Preference number: 1 (lower is better) Translates to: PHSSSNNLSSLGYRD*GGRARAREQGCVAV Trigger: CACTGCCACACAGCCTTGCTCCCTGGCTCTTGCTCTGCCTCCTCAATCCCTGTATCCCAACGACGATAAATTATTGCTACTGCTGTGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018966.8 |
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| 3UTR-3UTR CCA 90 bp | GGCGTCCCCGGGCAGACCCCAGGATCCCAGAACCCTTCAGTCAAAGAGGGTAGCCAAGGCACAGCTGGCTaGTTGGGGCAAGGAGCAGGG | + |
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Preference number: 2 (lower is better) Translates to: GVPGQTPGSQNPSVKEGSQGTAG*LGQGAG Trigger: CCCTGCTCCTTGCCCCAACCAGCCAGCTGTGCCTTG...GCTACCCTCTTTGACTGAAGGGTTCTGGGATCCTGGGGTCTGCCCGGGGACGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000018966.8 |
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| 3UTR-3UTR CCA 90 bp | GTGGCAGTGAACGCAGAAGCAGCTGAGCCTGCACTCCAGTCCATCGTGGCTCCAAGAAAGTCCTTCTACTaGGAGAGGGGGCGTCCCCGG | + |
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Preference number: 2 (lower is better) Translates to: VAVNAEAAEPALQSIVAPRKSFY*ERGRPR Trigger: CCGGGGACGCCCCCTCTCCCAGTAGAAGGACTTTCT...TGGAGCCACGATGGACTGGAGTGCAGGCTCAGCTGCTTCTGCGTTCACTGCCAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018966.8 |
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| 3UTR-3UTR CCA 90 bp | TTTTCAGACACTAGGGCTTCCCCCAGAAGAGAAAGTCCTTCTACTGGGAGAGGGGAGGCAAGGCACAGCTaGCTGGTTGGGGCAAGGAGC | + |
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Preference number: 2 (lower is better) Translates to: FSDTRASPRRESPSTGRGEARHS*LVGARS Trigger: GCTCCTTGCCCCAACCAGCCAGCTGTGCCTTGCCTC...CCCTCTCCCAGTAGAAGGACTTTCTCTTCTGGGGGAAGCCCTAGTGTCTGAAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000018966.8 |
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| 3UTR-3UTR GCA 90 bp | TTTTCAGACACTAGGGCTTCCCCCAGAAGAGAAAGTCCTTCTACTGGGAGAGGGAGCCTGTGCAGTAGGTaGGTGAAGCCATCCTTGGGG | + |
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Preference number: 2 (lower is better) Translates to: FSDTRASPRRESPSTGRGSLCSR*VKPSLG Trigger: CCCCAAGGATGGCTTCACGCACCTACTGCACAGGCT...CCCTCTCCCAGTAGAAGGACTTTCTCTTCTGGGGGAAGCCCTAGTGTCTGAAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018966.8 |
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| 3UTR-3UTR CCA 90 bp | TGTGATGACACACAAAGGGGCATGGGGGAGGAAAGCTATTCCCTAAGTACGGATACCCACAATCCTTTCTaGAAAGCCCCTCCCCAGGCT | + |
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Preference number: 2 (lower is better) Translates to: CDDTQRGMGEESYSLSTDTHNPF*KAPPQA Trigger: AGCCTGGGGAGGGGCTTTCCAGAAAGGATTGTGGGT...ATCCGTACTTAGGGAATAGCTTTCCTCCCCCATGCCCCTTTGTGTGTCATCACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000018966.8 |
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| 3UTR CCA 72 bp | ACGCAGAAGCAGCTGAGCCTGCACTCCAGTCCATCGTaGCTCCAGATGAGGAGTGGGCGTGGCTGGAAGACG | + |
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Preference number: 3 (lower is better) Translates to: TQKQLSLHSSPS*LQMRSGRGWKT Trigger: CGTCTTCCAGCCACGCCCACTCCTCATCTGGAGCCACGATGGACTGGAGTGCAGGCTCAGCTGCTTCTGCGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018966.8 |
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| 3UTR TCA 72 bp | GCAGAGCAAGAGCCAGGGAGCAAGGCTGTGTGGCAGTaGACGCAGAAGCAGCTGAGCCTGCACTCCAGTCCA | + |
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Preference number: 3 (lower is better) Translates to: AEQEPGSKAVWQ*TQKQLSLHSSP Trigger: TGGACTGGAGTGCAGGCTCAGCTGCTTCTGCGTTCACTGCCACACAGCCTTGCTCCCTGGCTCTTGCTCTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018966.8 |
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| 3UTR CCA 72 bp | CCTGCACTCCAGTCCATCGTGGCTCCAGATGAGGAGTaGGCGTGGCTGGAAGACGTGGAGGCCTTGGATCTT | + |
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Preference number: 3 (lower is better) Translates to: PALQSIVAPDEE*AWLEDVEALDL Trigger: AAGATCCAAGGCCTCCACGTCTTCCAGCCACGCCCACTCCTCATCTGGAGCCACGATGGACTGGAGTGCAGG 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018966.8 |
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| 3UTR GCA 72 bp | GTGGGCGTGGCTGGAAGACGTGGAGGCCTTGGATCTTaGTCTTTGGAGGACTGTGATGACACACAAAGGGGC | + |
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Preference number: 3 (lower is better) Translates to: VGVAGRRGGLGS*SLEDCDDTQRG Trigger: GCCCCTTTGTGTGTCATCACAGTCCTCCAAAGAGCAAGATCCAAGGCCTCCACGTCTTCCAGCCACGCCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018966.8 |
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| 3UTR CCA 72 bp | CCTTCAGTCAAAGAGGGTAGCCCCATGCCTCTGCTTTaGAGCCTGTGCAGTAGGTGCGTGAAGCCATCCTTG | + |
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Preference number: 3 (lower is better) Translates to: PSVKEGSPMPLL*SLCSRCVKPSL Trigger: CAAGGATGGCTTCACGCACCTACTGCACAGGCTCCAAAGCAGAGGCATGGGGCTACCCTCTTTGACTGAAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018966.8 |
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| 3UTR CCA 72 bp | TGGCTGGAAGACGTGGAGGCCTTGGATCTTGCTCTTTaGAGGACTGTGATGACACACAAAGGGGCATGGGGG | + |
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Preference number: 3 (lower is better) Translates to: WLEDVEALDLAL*RTVMTHKGAWG Trigger: CCCCCATGCCCCTTTGTGTGTCATCACAGTCCTCCAAAGAGCAAGATCCAAGGCCTCCACGTCTTCCAGCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018966.8 |
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| 3UTR TCA 72 bp | AGTAGCAATAATTTATCGTCGTTGGGATACAGGGATTaGGGAGGCAGAGCAAGAGCCAGGGAGCAAGGCTGT | + |
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Preference number: 3 (lower is better) Translates to: SSNNLSSLGYRD*GGRARAREQGC Trigger: ACAGCCTTGCTCCCTGGCTCTTGCTCTGCCTCCTCAATCCCTGTATCCCAACGACGATAAATTATTGCTACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018966.8 |
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| CDS-3UTR CCA 90 bp | GTGAGGCCAAGTGGGCGTGGACAGAGGCGAGGCAAGGCACAGCTGGCTGGTTGGAGCGGCAGGGGTAGATaGGTCGGTCCAGGCAGACGG | + |
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Preference number: 4 (lower is better) Translates to: VRPSGRGQRRGKAQLAGWSGRGR*VGPGRR Trigger: CCGTCTGCCTGGACCGACCCATCTACCCCTGCCGCT...CCAACCAGCCAGCTGTGCCTTGCCTCGCCTCTGTCCACGCCCACTTGGCCTCAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018966.8 |
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| CDS-3UTR GCA 90 bp | AGTCCATCGTGGCTCCAGATGAGGAGTGGGCGTGGCTGGAAGACGTGGAGGCCTGGCAGGTGCCCGAACTaGACCGCGATGCAGAGGTCG | + |
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Preference number: 4 (lower is better) Translates to: SPSWLQMRSGRGWKTWRPGRCPN*TAMQRS Trigger: CGACCTCTGCATCGCGGTGCAGTTCGGGCACCTGCC...AGGCCTCCACGTCTTCCAGCCACGCCCACTCCTCATCTGGAGCCACGATGGACT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018966.8 |
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| CDS-3UTR CCA 90 bp | AGTCCATCGTGGCTCCAGATGAGGAGTGGGCGTGGCTGGAAGACGTGGAGGCCTGCGCTTGGCCAGCAGTaGCAGCCAGCTGCTTGCCTG | + |
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Preference number: 4 (lower is better) Translates to: SPSWLQMRSGRGWKTWRPALGQQ*QPAACL Trigger: CAGGCAAGCAGCTGGCTGCCACTGCTGGCCAAGCGC...AGGCCTCCACGTCTTCCAGCCACGCCCACTCCTCATCTGGAGCCACGATGGACT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018966.8 |
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| CDS-3UTR GCA 90 bp | CAAGTGGGCGTGGACAGAGGCGAGGCAAGGCACAGCTGGCTGGTTGGGGCAAGGAGGCCATCAGCGCTGTaGTCCATCTCACACTGGGCA | + |
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Preference number: 4 (lower is better) Translates to: QVGVDRGEARHSWLVGARRPSAL*SISHWA Trigger: TGCCCAGTGTGAGATGGAGCACAGCGCTGATGGCCT...CCTTGCCCCAACCAGCCAGCTGTGCCTTGCCTCGCCTCTGTCCACGCCCACTTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018966.8 |
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| CDS-3UTR GCA 90 bp | GTGGCAGTGAACGCAGAAGCAGCTGAGCCTGCACTCCAGTCCATCGTGGCTCCACAGCTGCTTGCCTGCTaGTTCACCTCGGCCAGGCTC | + |
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Preference number: 4 (lower is better) Translates to: VAVNAEAAEPALQSIVAPQLLAC*FTSARL Trigger: GAGCCTGGCCGAGGTGAAGCAGCAGGCAAGCAGCTG...TGGAGCCACGATGGACTGGAGTGCAGGCTCAGCTGCTTCTGCGTTCACTGCCAC 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018966.8 |
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| CDS-3UTR CCA 90 bp | CGGATCCCGCTTAGCGATGAGACCCACAATCCTTTCTGGAAAGCCCCTCCCCAGGGCACTGCGGTGGCTTaGAGTAGGAGCGGCCGTGCA | + |
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Preference number: 4 (lower is better) Translates to: RIPLSDETHNPFWKAPPQGTAVA*SRSGRA Trigger: TGCACGGCCGCTCCTACTCCAAGCCACCGCAGTGCC...CTGGGGAGGGGCTTTCCAGAAAGGATTGTGGGTCTCATCGCTAAGCGGGATCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018966.8 |
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| CDS-3UTR TCA 90 bp | CGGATCCCGCTTAGCGATGAGACCCACAATCCTTTCTGGAAAGCCCCTCCCCAGAGCGGTAGACGGCCGTaGGCAGCAGCTGTCCCTCTA | + |
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Preference number: 4 (lower is better) Translates to: RIPLSDETHNPFWKAPPQSGRRP*AAAVPL Trigger: TAGAGGGACAGCTGCTGCTCACGGCCGTCTACCGCT...CTGGGGAGGGGCTTTCCAGAAAGGATTGTGGGTCTCATCGCTAAGCGGGATCCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018966.8 |
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| CDS-3UTR GCA 90 bp | CGGATCCCGCTTAGCGATGAGACCCACAATCCTTTCTGGAAAGCCCCTCCCCAGGGTTGGGCAGCCGCATaGGCTTGTAGCCCACCGTGT | + |
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Preference number: 4 (lower is better) Translates to: RIPLSDETHNPFWKAPPQGWAAA*ACSPPC Trigger: ACACGGTGGGCTACAAGCGCATGCGGCTGCCCAACC...CTGGGGAGGGGCTTTCCAGAAAGGATTGTGGGTCTCATCGCTAAGCGGGATCCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018966.8 |
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| CDS-3UTR GCA 90 bp | GGCGTCCCCGGGCAGACCCCAGGATCCCAGAACCCTTCAGTCAAAGAGGGTAGCGCTTCTTGGTGTCCTTaGGCTTTAAGGGGCCTGCCT | + |
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Preference number: 4 (lower is better) Translates to: GVPGQTPGSQNPSVKEGSASWCP*ALRGLP Trigger: AGGCAGGCCCCTTAAAGCGCAAGGACACCAAGAAGC...GCTACCCTCTTTGACTGAAGGGTTCTGGGATCCTGGGGTCTGCCCGGGGACGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000018966.8 |
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| CDS-3UTR CCA 90 bp | GAGGAGTGGGCGTGGCTGGAAGACGTGGAGGCCTTGGATCTTGCTCTTTGGAGGACCTGGGTGTCTGAGTaGCAGCGCTTGGCCAGCAGT | + |
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Preference number: 4 (lower is better) Translates to: EEWAWLEDVEALDLALWRTWVSE*QRLASS Trigger: ACTGCTGGCCAAGCGCTGCCACTCAGACACCCAGGT...CCTCCAAAGAGCAAGATCCAAGGCCTCCACGTCTTCCAGCCACGCCCACTCCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018966.8 |
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| CDS-3UTR CCA 90 bp | CAAGTGGGCGTGGACAGAGGCGAGGCAAGGCACAGCTGGCTGGTTGGGGCAAGGGCAGGACCAGCTTCTTaGTGTCCTTGCGCTTTAAGG | + |
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Preference number: 4 (lower is better) Translates to: QVGVDRGEARHSWLVGARAGPAS*CPCALR Trigger: CCTTAAAGCGCAAGGACACCAAGAAGCTGGTCCTGC...CCTTGCCCCAACCAGCCAGCTGTGCCTTGCCTCGCCTCTGTCCACGCCCACTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018966.8 |
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| CDS-3UTR TCA 90 bp | CGGATCCCGCTTAGCGATGAGACCCACAATCCTTTCTGGAAAGCCCCTCCCCAGCTACTTTGCGGCCCATaGCCAGGAAGCTGCCCGTCA | + |
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Preference number: 4 (lower is better) Translates to: RIPLSDETHNPFWKAPPQLLCGP*PGSCPS Trigger: TGACGGGCAGCTTCCTGGTCATGGGCCGCAAAGTAG...CTGGGGAGGGGCTTTCCAGAAAGGATTGTGGGTCTCATCGCTAAGCGGGATCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018966.8 |
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| CDS-3UTR CCA 90 bp | GTCAAAGAGGGTAGCCCCATGCCTCTGCTTTGGAGCCTGTGCAGTAGGTGCGTGTCCAGGGGGAACTTGTaGCAGTGCAGCATCTCGGGC | + |
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Preference number: 4 (lower is better) Translates to: VKEGSPMPLLWSLCSRCVSRGNL*QCSISG Trigger: GCCCGAGATGCTGCACTGCCACAAGTTCCCCCTGGA...CACGCACCTACTGCACAGGCTCCAAAGCAGAGGCATGGGGCTACCCTCTTTGAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018966.8 |
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| CDS-3UTR CCA 90 bp | CAAGTGGGCGTGGACAGAGGCGAGGCAAGGCACAGCTGGCTGGTTGGGGCAAGGTGCTCCATCTCACACTaGGCACAGATCTTGGTCACT | + |
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Preference number: 4 (lower is better) Translates to: QVGVDRGEARHSWLVGARCSISH*AQILVT Trigger: AGTGACCAAGATCTGTGCCCAGTGTGAGATGGAGCA...CCTTGCCCCAACCAGCCAGCTGTGCCTTGCCTCGCCTCTGTCCACGCCCACTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018966.8 |
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| CDS-3UTR TCA 90 bp | AACCCTTCAGTCAAAGAGGGTAGCCCCATGCCTCTGCTTTGGAGCCTGTGCAGTGAAGACCTGGGTGTCTaGGTGGCAGCGCTTGGCCAG | + |
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Preference number: 4 (lower is better) Translates to: NPSVKEGSPMPLLWSLCSEDLGV*VAALGQ Trigger: CTGGCCAAGCGCTGCCACTCAGACACCCAGGTCTTC...ACTGCACAGGCTCCAAAGCAGAGGCATGGGGCTACCCTCTTTGACTGAAGGGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018966.8 |
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| CDS-3UTR TCA 90 bp | TGTGATGACACACAAAGGGGCATGGGGGAGGAAAGCTATTCCCTAAGTACGGATAACCGTAGGCCTCCATaGGCGGAGCGCAGCCGGCGC | + |
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Preference number: 4 (lower is better) Translates to: CDDTQRGMGEESYSLSTDNRRPP*AERSRR Trigger: GCGCCGGCTGCGCTCCGCTCATGGAGGCCTACGGTT...ATCCGTACTTAGGGAATAGCTTTCCTCCCCCATGCCCCTTTGTGTGTCATCACA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018966.8 |
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| CDS-3UTR GCA 90 bp | GAGGAGTGGGCGTGGCTGGAAGACGTGGAGGCCTTGGATCTTGCTCTTTGGAGGGCCCCGTTCTTCATATaGAGGACCAGCTTCTTGGTG | + |
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Preference number: 4 (lower is better) Translates to: EEWAWLEDVEALDLALWRAPFFI*RTSFLV Trigger: CACCAAGAAGCTGGTCCTGCATATGAAGAACGGGGC...CCTCCAAAGAGCAAGATCCAAGGCCTCCACGTCTTCCAGCCACGCCCACTCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018966.8 |
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| CDS-3UTR CCA 90 bp | GAGGCCCTGTATCCTGTATCCGTAGTCCTTCACATTTTCCTCCTCTGCCTGTTTGTCGAGGCACTGCGGTaGCTTGGAGTAGGAGCGGCC | + |
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Preference number: 4 (lower is better) Translates to: EALYPVSVVLHIFLLCLFVEALR*LGVGAA Trigger: GGCCGCTCCTACTCCAAGCCACCGCAGTGCCTCGAC...AAACAGGCAGAGGAGGAAAATGTGAAGGACTACGGATACAGGATACAGGGCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018966.8 |
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| CDS-3UTR CCA 90 bp | GAGGCCCTGTATCCTGTATCCGTAGTCCTTCACATTTTCCTCCTCTGCCTGTTTCTGAGTGGCAGCGCTTaGCCAGCAGTGGCAGCCAGC | + |
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Preference number: 4 (lower is better) Translates to: EALYPVSVVLHIFLLCLFLSGSA*PAVAAS Trigger: GCTGGCTGCCACTGCTGGCCAAGCGCTGCCACTCAG...AAACAGGCAGAGGAGGAAAATGTGAAGGACTACGGATACAGGATACAGGGCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018966.8 |
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| 3UTR CAA 72 bp | GTGGCTGGAAGACGTGGAGGCCTTGGATCTTGCTCTTaGGAGGACTGTGATGACACACAAAGGGGCATGGGG | + |
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Preference number: 4 (lower is better) Translates to: VAGRRGGLGSCS*EDCDDTQRGMG Trigger: CCCCATGCCCCTTTGTGTGTCATCACAGTCCTCCAAAGAGCAAGATCCAAGGCCTCCACGTCTTCCAGCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018966.8 |
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| 3UTR CAA 72 bp | GATGAGGAGTGGGCGTGGCTGGAAGACGTGGAGGCCTaGGATCTTGCTCTTTGGAGGACTGTGATGACACAC | + |
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Preference number: 4 (lower is better) Translates to: DEEWAWLEDVEA*DLALWRTVMTH Trigger: GTGTGTCATCACAGTCCTCCAAAGAGCAAGATCCAAGGCCTCCACGTCTTCCAGCCACGCCCACTCCTCATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018966.8 |
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| CDS-3UTR GCA 90 bp | TGTGATGACACACAAAGGGGCATGGGGGAGGAAAGCTATTCCCTAAGTACGGATCGAACTGCACCGCGATaGAGAGGTCGTTGTCCAGGG | + |
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Preference number: 4 (lower is better) Translates to: CDDTQRGMGEESYSLSTDRTAPR*RGRCPG Trigger: CCCTGGACAACGACCTCTGCATCGCGGTGCAGTTCG...ATCCGTACTTAGGGAATAGCTTTCCTCCCCCATGCCCCTTTGTGTGTCATCACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018966.8 |
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| CDS-3UTR CCA 90 bp | AACCCTTCAGTCAAAGAGGGTAGCCCCATGCCTCTGCTTTGGAGCCTGTGCAGTAGCTTCTTCTTCTTCTaGGCTCCAATCAACTTTCGG | + |
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Preference number: 4 (lower is better) Translates to: NPSVKEGSPMPLLWSLCSSFFFF*APINFR Trigger: CCGAAAGTTGATTGGAGCCCAGAAGAAGAAGAAGCT...ACTGCACAGGCTCCAAAGCAGAGGCATGGGGCTACCCTCTTTGACTGAAGGGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018966.8 |
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| CDS CCA 90 bp | CGGCTCGGCCTGCCAACCGTAGTAGTCGTACTCCTGGCCGCGTGTTaGCGCCCCATGCAGCGCCCCGAGCAGCAACGCCAGTGCGGCCGT | + |
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Preference number: 5 (lower is better) Translates to: RLGLPTVVVVLLAAC*RPMQRPEQQRQCGR Trigger: ACGGCCGCACTGGCGTTGCTGCTCGGGGCGCTGCATGGGGCGCCAACACGCGGCCAGGAGTACGACTACTACGGTTGGCAGGCCGAGCCG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018966.8 |
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| CDS GCA 90 bp | TCACTGGAGGCGCGGTGGCAGGCAGGTGCCCGAACTGCACCGCGATaGAGAGGTCGTTGTCCAGGGGGAACTTGTGGCAGTGCAGCATCT | + |
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Preference number: 5 (lower is better) Translates to: SLEARWQAGARTAPR*RGRCPGGTCGSAAS Trigger: AGATGCTGCACTGCCACAAGTTCCCCCTGGACAACGACCTCTGCATCGCGGTGCAGTTCGGGCACCTGCCTGCCACCGCGCCTCCAGTGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018966.8 |
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| CDS-3UTR CAA 90 bp | ACTAGGGCTTCCCCCAGAAGAGAAAGTCCTTCTACTGGGAGAGGGGGCGTCCCCTCTGAGTGGCAGCGCTaGGCCAGCAGTGGCAGCCAG | + |
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Preference number: 5 (lower is better) Translates to: TRASPRRESPSTGRGGVPSEWQR*ASSGSQ Trigger: CTGGCTGCCACTGCTGGCCAAGCGCTGCCACTCAGA...GGGGACGCCCCCTCTCCCAGTAGAAGGACTTTCTCTTCTGGGGGAAGCCCTAGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000018966.8 |
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| CDS-3UTR CAA 90 bp | TCCAGTCCATCGTGGCTCCAGATGAGGAGTGGGCGTGGCTGGAAGACGTGGAGGGCGATGCAGAGGTCGTaGTCCAGGGGGAACTTGTGG | + |
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Preference number: 5 (lower is better) Translates to: SSPSWLQMRSGRGWKTWRAMQRS*SRGNLW Trigger: CCACAAGTTCCCCCTGGACAACGACCTCTGCATCGC...CCTCCACGTCTTCCAGCCACGCCCACTCCTCATCTGGAGCCACGATGGACTGGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018966.8 |
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| CDS CCA 90 bp | CACATCTGTTCCATGAGGCCATCAGCGCTGTGCTCCATCTCACACTaGGCACAGATCTTGGTCACTGGAGGCGCGGTGGCAGGCAGGTGC | + |
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Preference number: 5 (lower is better) Translates to: HICSMRPSALCSISH*AQILVTGGAVAGRC Trigger: GCACCTGCCTGCCACCGCGCCTCCAGTGACCAAGATCTGTGCCCAGTGTGAGATGGAGCACAGCGCTGATGGCCTCATGGAACAGATGTG 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018966.8 |
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| CDS-3UTR CAA 90 bp | GTGAGGCCAAGTGGGCGTGGACAGAGGCGAGGCAAGGCACAGCTGGCTGGTTGGTGCAGGACCAGCTTCTaGGTGTCCTTGCGCTTTAAG | + |
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Preference number: 5 (lower is better) Translates to: VRPSGRGQRRGKAQLAGWCRTSF*VSLRFK Trigger: CTTAAAGCGCAAGGACACCAAGAAGCTGGTCCTGCA...CCAACCAGCCAGCTGTGCCTTGCCTCGCCTCTGTCCACGCCCACTTGGCCTCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018966.8 |
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| CDS-3UTR CAA 90 bp | ACTAGGGCTTCCCCCAGAAGAGAAAGTCCTTCTACTGGGAGAGGGGGCGTCCCCTTGTCCAGGGGGAACTaGTGGCAGTGCAGCATCTCG | + |
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Preference number: 5 (lower is better) Translates to: TRASPRRESPSTGRGGVPLSRGN*WQCSIS Trigger: CGAGATGCTGCACTGCCACAAGTTCCCCCTGGACAA...GGGGACGCCCCCTCTCCCAGTAGAAGGACTTTCTCTTCTGGGGGAAGCCCTAGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENSMUST00000018966.8 |
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| CDS-3UTR CAA 90 bp | CGGATCCCGCTTAGCGATGAGACCCACAATCCTTTCTGGAAAGCCCCTCCCCAGAGCTTCTTGGTGTCCTaGCGCTTTAAGGGGCCTGCC | + |
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Preference number: 5 (lower is better) Translates to: RIPLSDETHNPFWKAPPQSFLVS*RFKGPA Trigger: GGCAGGCCCCTTAAAGCGCAAGGACACCAAGAAGCT...CTGGGGAGGGGCTTTCCAGAAAGGATTGTGGGTCTCATCGCTAAGCGGGATCCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000018966.8 |
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| CDS GCA 90 bp | ACAAAGTCACTGGAGCACATCTGTTCCATGAGGCCATCAGCGCTGTaGTCCATCTCACACTGGGCACAGATCTTGGTCACTGGAGGCGCG | + |
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Preference number: 5 (lower is better) Translates to: TKSLEHICSMRPSAL*SISHWAQILVTGGA Trigger: CGCGCCTCCAGTGACCAAGATCTGTGCCCAGTGTGAGATGGAGCACAGCGCTGATGGCCTCATGGAACAGATGTGCTCCAGTGACTTTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018966.8 |
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| CDS GCA 90 bp | AGGTTGTCTAACTGTGGGCAAGGGCAGCTTGCCCCGTTCTTCATATaGAGGACCAGCTTCTTGGTGTCCTTGCGCTTTAAGGGGCCTGCC | + |
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Preference number: 5 (lower is better) Translates to: RLSNCGQGQLAPFFI*RTSFLVSLRFKGPA Trigger: GGCAGGCCCCTTAAAGCGCAAGGACACCAAGAAGCTGGTCCTGCATATGAAGAACGGGGCAAGCTGCCCTTGCCCACAGTTAGACAACCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018966.8 |
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| CDS-3UTR CAA 90 bp | TGTGATGACACACAAAGGGGCATGGGGGAGGAAAGCTATTCCCTAAGTACGGATCACTGGGCACAGATCTaGGTCACTGGAGGCGCGGTG | + |
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Preference number: 5 (lower is better) Translates to: CDDTQRGMGEESYSLSTDHWAQI*VTGGAV Trigger: CACCGCGCCTCCAGTGACCAAGATCTGTGCCCAGTG...ATCCGTACTTAGGGAATAGCTTTCCTCCCCCATGCCCCTTTGTGTGTCATCACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018966.8 |
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| CDS-3UTR CAA 90 bp | GAGGAGTGGGCGTGGCTGGAAGACGTGGAGGCCTTGGATCTTGCTCTTTGGAGGAACTTTCGGTCCCCGTaGTCTATCTTGATCTCCTTA | + |
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Preference number: 5 (lower is better) Translates to: EEWAWLEDVEALDLALWRNFRSP*SILISL Trigger: TAAGGAGATCAAGATAGACAACGGGGACCGAAAGTT...CCTCCAAAGAGCAAGATCCAAGGCCTCCACGTCTTCCAGCCACGCCCACTCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018966.8 |
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| CDS-3UTR CAA 90 bp | GAGGCCCTGTATCCTGTATCCGTAGTCCTTCACATTTTCCTCCTCTGCCTGTTTAGCTGTCCCTCTACTTaGCGGCCCATGACCAGGAAG | + |
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Preference number: 5 (lower is better) Translates to: EALYPVSVVLHIFLLCLFSCPST*RPMTRK Trigger: CTTCCTGGTCATGGGCCGCAAAGTAGAGGGACAGCT...AAACAGGCAGAGGAGGAAAATGTGAAGGACTACGGATACAGGATACAGGGCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018966.8 |
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| CDS GCA 90 bp | AAAAGGGTAGTAGAGGGAACAGGGATAGGAGAACATGAATTTGACTaGAAACTTCATCTCCTTATTCTTCTTGTCCCAGCGGTAGACGGC | + |
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Preference number: 5 (lower is better) Translates to: KRVVEGTGIGEHEFD*KLHLLILLVPAVDG Trigger: GCCGTCTACCGCTGGGACAAGAAGAATAAGGAGATGAAGTTTGCAGTCAAATTCATGTTCTCCTATCCCTGTTCCCTCTACTACCCTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018966.8 |
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| CDS CAA 90 bp | GCGGCTCGGCCTGCCAACCGTAGTAGTCGTACTCCTGGCCGCGTGTaGGCGCCCCATGCAGCGCCCCGAGCAGCAACGCCAGTGCGGCCG | + |
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Preference number: 6 (lower is better) Translates to: AARPANRSSRTPGRV*APHAAPRAATPVRP Trigger: CGGCCGCACTGGCGTTGCTGCTCGGGGCGCTGCATGGGGCGCCAACACGCGGCCAGGAGTACGACTACTACGGTTGGCAGGCCGAGCCGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018966.8 |
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| CDS CCA 72 bp | CTGCCAACCGTAGTAGTCGTACTCCTGGCCGCGTGTTaGCGCCCCATGCAGCGCCCCGAGCAGCAACGCCAG | + |
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Preference number: 6 (lower is better) Translates to: LPTVVVVLLAAC*RPMQRPEQQRQ Trigger: CTGGCGTTGCTGCTCGGGGCGCTGCATGGGGCGCCAACACGCGGCCAGGAGTACGACTACTACGGTTGGCAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018966.8 |
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| CDS GCA 72 bp | CAGATCTTGGTCACTGGAGGCGCGGTGGCAGGCAGGTaGCCGAACTGCACCGCGATGCAGAGGTCGTTGTCC | + |
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Preference number: 6 (lower is better) Translates to: QILVTGGAVAGR*PNCTAMQRSLS Trigger: GGACAACGACCTCTGCATCGCGGTGCAGTTCGGGCACCTGCCTGCCACCGCGCCTCCAGTGACCAAGATCTG 65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018966.8 |
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| CDS CAA 72 bp | TCAGCGCTGTGCTCCATCTCACACTGGGCACAGATCTaGGTCACTGGAGGCGCGGTGGCAGGCAGGTGCCCG | + |
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Preference number: 6 (lower is better) Translates to: SALCSISHWAQI*VTGGAVAGRCP Trigger: CGGGCACCTGCCTGCCACCGCGCCTCCAGTGACCAAGATCTGTGCCCAGTGTGAGATGGAGCACAGCGCTGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018966.8 |
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| CDS CCA 72 bp | GTGCTCCATCTCACACTGGGCACAGATCTTGGTCACTaGAGGCGCGGTGGCAGGCAGGTGCCCGAACTGCAC | + |
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Preference number: 6 (lower is better) Translates to: VLHLTLGTDLGH*RRGGRQVPELH Trigger: GTGCAGTTCGGGCACCTGCCTGCCACCGCGCCTCCAGTGACCAAGATCTGTGCCCAGTGTGAGATGGAGCAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018966.8 |
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| CDS CAA 90 bp | ATGAGGCCATCAGCGCTGTGCTCCATCTCACACTGGGCACAGATCTaGGTCACTGGAGGCGCGGTGGCAGGCAGGTGCCCGAACTGCACC | + |
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Preference number: 6 (lower is better) Translates to: MRPSALCSISHWAQI*VTGGAVAGRCPNCT Trigger: GGTGCAGTTCGGGCACCTGCCTGCCACCGCGCCTCCAGTGACCAAGATCTGTGCCCAGTGTGAGATGGAGCACAGCGCTGATGGCCTCAT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018966.8 |
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| CDS CCA 72 bp | TCCATGAGGCCATCAGCGCTGTGCTCCATCTCACACTaGGCACAGATCTTGGTCACTGGAGGCGCGGTGGCA | + |
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Preference number: 6 (lower is better) Translates to: SMRPSALCSISH*AQILVTGGAVA Trigger: TGCCACCGCGCCTCCAGTGACCAAGATCTGTGCCCAGTGTGAGATGGAGCACAGCGCTGATGGCCTCATGGA 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018966.8 |
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| CDS CAA 72 bp | ACTTTGCGGCCCATGACCAGGAAGCTGCCCGTCAGGTaGTCTAACTGTGGGCAAGGGCAGCTTGCCCCGTTC | + |
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Preference number: 6 (lower is better) Translates to: TLRPMTRKLPVR*SNCGQGQLAPF Trigger: GAACGGGGCAAGCTGCCCTTGCCCACAGTTAGACAACCTGACGGGCAGCTTCCTGGTCATGGGCCGCAAAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018966.8 |
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| CDS CAA 90 bp | CCAGGAAGCTGCCCGTCAGGTTGTCTAACTGTGGGCAAGGGCAGCTaGCCCCGTTCTTCATATGCAGGACCAGCTTCTTGGTGTCCTTGC | + |
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Preference number: 6 (lower is better) Translates to: PGSCPSGCLTVGKGS*PRSSYAGPASWCPC Trigger: GCAAGGACACCAAGAAGCTGGTCCTGCATATGAAGAACGGGGCAAGCTGCCCTTGCCCACAGTTAGACAACCTGACGGGCAGCTTCCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018966.8 |
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| CDS CAA 72 bp | CAGCTTGCCCCGTTCTTCATATGCAGGACCAGCTTCTaGGTGTCCTTGCGCTTTAAGGGGCCTGCCTTGAGC | + |
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Preference number: 6 (lower is better) Translates to: QLAPFFICRTSF*VSLRFKGPALS Trigger: GCTCAAGGCAGGCCCCTTAAAGCGCAAGGACACCAAGAAGCTGGTCCTGCATATGAAGAACGGGGCAAGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018966.8 |
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| CDS CAA 72 bp | TGCCCGTCAGGTTGTCTAACTGTGGGCAAGGGCAGCTaGCCCCGTTCTTCATATGCAGGACCAGCTTCTTGG | + |
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Preference number: 6 (lower is better) Translates to: CPSGCLTVGKGS*PRSSYAGPASW Trigger: CCAAGAAGCTGGTCCTGCATATGAAGAACGGGGCAAGCTGCCCTTGCCCACAGTTAGACAACCTGACGGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018966.8 |
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| CDS GCA 72 bp | CTGGAGCACATCTGTTCCATGAGGCCATCAGCGCTGTaGTCCATCTCACACTGGGCACAGATCTTGGTCACT | + |
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Preference number: 6 (lower is better) Translates to: LEHICSMRPSAL*SISHWAQILVT Trigger: AGTGACCAAGATCTGTGCCCAGTGTGAGATGGAGCACAGCGCTGATGGCCTCATGGAACAGATGTGCTCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018966.8 |
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| CDS GCA 72 bp | AACTGTGGGCAAGGGCAGCTTGCCCCGTTCTTCATATaGAGGACCAGCTTCTTGGTGTCCTTGCGCTTTAAG | + |
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Preference number: 6 (lower is better) Translates to: NCGQGQLAPFFI*RTSFLVSLRFK Trigger: CTTAAAGCGCAAGGACACCAAGAAGCTGGTCCTGCATATGAAGAACGGGGCAAGCTGCCCTTGCCCACAGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018966.8 |
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| CDS CAA 90 bp | TTCTTCTTCTGGGCTCCAATCAACTTTCGGTCCCCGTTGTCTATCTaGATCTCCTTAATGCGCATCTTGACCACAAAGTCACTGGAGCAC | + |
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Preference number: 6 (lower is better) Translates to: FFFWAPINFRSPLSI*ISLMRILTTKSLEH Trigger: GTGCTCCAGTGACTTTGTGGTCAAGATGCGCATTAAGGAGATCAAGATAGACAACGGGGACCGAAAGTTGATTGGAGCCCAGAAGAAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018966.8 |
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| CDS CAA 90 bp | AGCAGCTTCTTCTTCTTCTGGGCTCCAATCAACTTTCGGTCCCCGTaGTCTATCTTGATCTCCTTAATGCGCATCTTGACCACAAAGTCA | + |
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Preference number: 6 (lower is better) Translates to: SSFFFFWAPINFRSP*SILISLMRILTTKS Trigger: TGACTTTGTGGTCAAGATGCGCATTAAGGAGATCAAGATAGACAACGGGGACCGAAAGTTGATTGGAGCCCAGAAGAAGAAGAAGCTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018966.8 |
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| CDS CAA 72 bp | TGGGCTCCAATCAACTTTCGGTCCCCGTTGTCTATCTaGATCTCCTTAATGCGCATCTTGACCACAAAGTCA | + |
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Preference number: 6 (lower is better) Translates to: WAPINFRSPLSI*ISLMRILTTKS Trigger: TGACTTTGTGGTCAAGATGCGCATTAAGGAGATCAAGATAGACAACGGGGACCGAAAGTTGATTGGAGCCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018966.8 |
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| CDS CAA 72 bp | TTCTTCTTCTGGGCTCCAATCAACTTTCGGTCCCCGTaGTCTATCTTGATCTCCTTAATGCGCATCTTGACC | + |
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Preference number: 6 (lower is better) Translates to: FFFWAPINFRSP*SILISLMRILT Trigger: GGTCAAGATGCGCATTAAGGAGATCAAGATAGACAACGGGGACCGAAAGTTGATTGGAGCCCAGAAGAAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018966.8 |
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