Pregenerated sensors for SFRP4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021319Ensembl transcript IDs: ENSMUST00000002883.7, ENSMUST00000221810.2, ENSMUST00000222464.2, ENSMUST00000222992.2
Found 155 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTTCATTATCTTCTCTTGCAGTCTAAGTCTCTTTCAGCCCCAGCCTaGCTCCCAGCTGTACCCGGTTCATGTAGGCCACGGGCCGGCATA | + |
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Preference number: 1 (lower is better) Translates to: LHYLLLQSKSLSAPA*LPAVPGSCRPRAGI Trigger: TATGCCGGCCCGTGGCCTACATGAACCGGGTACAGCTGGGAGGCAGGCTGGGGCTGAAAGAGACTTAGACTGCAAGAGAAGATAATGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222464.2 |
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| 3UTR GCA 90 bp | AAGGGCCTTGATCAGAACCTTTGTCTTGGCTTCATTATCTTCTCTTaGAGTCTAAGTCTCTTTCAGCCCCAGCCTGCCTCCCAGCTGTAC | + |
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Preference number: 1 (lower is better) Translates to: KGLDQNLCLGFIIFS*SLSLFQPQPASQLY Trigger: GTACAGCTGGGAGGCAGGCTGGGGCTGAAAGAGACTTAGACTGCAAGAGAAGATAATGAAGCCAAGACAAAGGTTCTGATCAAGGCCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222464.2 |
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| 3UTR TCA 90 bp | ACTCTTAAAACAGGAGGTCTTACACAGTATGCACACAGACAACTGTaGATTCAGGTACCCTTCCACAAGCCTTCCCTCTTGTACTTTCCA | + |
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Preference number: 1 (lower is better) Translates to: TLKTGGLTQYAHRQL*IQVPFHKPSLLYFP Trigger: TGGAAAGTACAAGAGGGAAGGCTTGTGGAAGGGTACCTGAATTCACAGTTGTCTGTGTGCATACTGTGTAAGACCTCCTGTTTTAAGAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000002883.7 ENSMUST00000221810.2 ENSMUST00000222464.2 ENSMUST00000222992.2 |
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| 3UTR TCA 90 bp | CATGTTACCCTTTTATGCTGTTCAGTTAATACCAGAAATGACCCGTaGGCTTTCATGTTAGTGCAGTTCTTCTGTAATGTCACGGCAATT | + |
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Preference number: 1 (lower is better) Translates to: HVTLLCCSVNTRNDP*AFMLVQFFCNVTAI Trigger: AATTGCCGTGACATTACAGAAGAACTGCACTAACATGAAAGCTCACGGGTCATTTCTGGTATTAACTGAACAGCATAAAAGGGTAACATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222464.2 |
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| 3UTR-3UTR TCA 90 bp | CTTCCCTCTTGTACTTTCCATACCAGAAAACCAACAAGTAACAGGGCTCTGTGGAGCCTCCCTCAGCCTTaGAGCAGGCTGATCCAGACT | + |
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Preference number: 2 (lower is better) Translates to: LPSCTFHTRKPTSNRALWSLPQP*SRLIQT Trigger: AGTCTGGATCAGCCTGCTTCAAGGCTGAGGGAGGCT...CCACAGAGCCCTGTTACTTGTTGGTTTTCTGGTATGGAAAGTACAAGAGGGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222464.2 |
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| 3UTR-3UTR TCA 90 bp | GCCTTCCCTCTTGTACTTTCCATACCAGAAAACCAACAAGTAACAGGGCTCTGTGCACACAGACAACTGTaGATTCAGGTACCCTTCCAC | + |
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Preference number: 2 (lower is better) Translates to: AFPLVLSIPENQQVTGLCAHRQL*IQVPFH Trigger: GTGGAAGGGTACCTGAATTCACAGTTGTCTGTGTGC...ACAGAGCCCTGTTACTTGTTGGTTTTCTGGTATGGAAAGTACAAGAGGGAAGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000002883.7 ENSMUST00000221810.2 ENSMUST00000222464.2 ENSMUST00000222992.2 |
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| 3UTR-3UTR TCA 90 bp | ACCCTTCCACAAGCCTTCCCTCTTGTACTTTCCATACCAGAAAACCAACAAGTAGCACACAGACAACTGTaGATTCAGGTACCCTTCCAC | + |
|
Preference number: 2 (lower is better) Translates to: TLPQAFPLVLSIPENQQVAHRQL*IQVPFH Trigger: GTGGAAGGGTACCTGAATTCACAGTTGTCTGTGTGC...TACTTGTTGGTTTTCTGGTATGGAAAGTACAAGAGGGAAGGCTTGTGGAAGGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000002883.7 ENSMUST00000221810.2 ENSMUST00000222464.2 ENSMUST00000222992.2 |
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| 3UTR-3UTR GCA 90 bp | CTTCCCTCTTGTACTTTCCATACCAGAAAACCAACAAGTAACAGGGCTCTGTGGAGCCTCTCTTCCCACTaGTGGGAGGCAATTTGTAAA | + |
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Preference number: 2 (lower is better) Translates to: LPSCTFHTRKPTSNRALWSLSSH*WEAICK Trigger: TTTACAAATTGCCTCCCAGCAGTGGGAAGAGAGGCT...CCACAGAGCCCTGTTACTTGTTGGTTTTCTGGTATGGAAAGTACAAGAGGGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222464.2 |
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| 3UTR-3UTR GCA 90 bp | CTTCATTATCTTCTCTTGCAGTCTAAGTCTCTTTCAGCCCCAGCCTGCCTCCCAAGGTCTTACACAGTATaGACACAGACAACTGTGAAT | + |
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Preference number: 2 (lower is better) Translates to: LHYLLLQSKSLSAPACLPRSYTV*TQTTVN Trigger: ATTCACAGTTGTCTGTGTGCATACTGTGTAAGACCT...TGGGAGGCAGGCTGGGGCTGAAAGAGACTTAGACTGCAAGAGAAGATAATGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222464.2 |
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| 3UTR-3UTR CCA 90 bp | CAAGTAACAGGGCTCTGTGGCTTAAAGCAAAACACTGAAGCTATCATTACGAGATCACAACAGATACCCTaGGCACTGTTGTCACAAGCA | + |
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Preference number: 2 (lower is better) Translates to: QVTGLCGLKQNTEAIITRSQQIP*ALLSQA Trigger: TGCTTGTGACAACAGTGCCCAGGGTATCTGTTGTGA...TCTCGTAATGATAGCTTCAGTGTTTTGCTTTAAGCCACAGAGCCCTGTTACTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222464.2 |
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| 3UTR-3UTR TCA 90 bp | ATGAGTCACCTGACACATAACCAACTTTCCTTCAGAACAAAGGTTATGGTATTCGCACACAGACAACTGTaGATTCAGGTACCCTTCCAC | + |
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Preference number: 2 (lower is better) Translates to: MSHLTHNQLSFRTKVMVFAHRQL*IQVPFH Trigger: GTGGAAGGGTACCTGAATTCACAGTTGTCTGTGTGC...GAATACCATAACCTTTGTTCTGAAGGAAAGTTGGTTATGTGTCAGGTGACTCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222464.2 |
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| 3UTR-3UTR CCA 90 bp | GTAAGGGTGGCTCCATCACAGAAAGTAATTAGCTTGCGCTTTTCTTCAGGTTTGGTCAGTTCTATTTTGTaGGCATGCTCTATCTTCAGC | + |
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Preference number: 2 (lower is better) Translates to: VRVAPSQKVISLRFSSGLVSSIL*ACSIFS Trigger: GCTGAAGATAGAGCATGCCCACAAAATAGAACTGAC...CAAACCTGAAGAAAAGCGCAAGCTAATTACTTTCTGTGATGGAGCCACCCTTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222464.2 |
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| 3UTR-3UTR TCA 90 bp | TTCTCACAGGACTGTAGAACCATTAAAAATTCTTGCCAAAATTCAGCGTTCTCCTGCGAACTGAAAAACTaGGGAGGAATGATTTCTTTC | + |
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Preference number: 2 (lower is better) Translates to: FSQDCRTIKNSCQNSAFSCELKN*GGMISF Trigger: GAAAGAAATCATTCCTCCTCAGTTTTTCAGTTCGCA...GGAGAACGCTGAATTTTGGCAAGAATTTTTAATGGTTCTACAGTCCTGTGAGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000222464.2 |
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| 3UTR-3UTR TCA 90 bp | ATGAGTCACCTGACACATAACCAACTTTCCTTCAGAACAAAGGTTATGGTATTCTATAAGCACAGTTTCTaGGTAAAATCAAGGGCCTTG | + |
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Preference number: 2 (lower is better) Translates to: MSHLTHNQLSFRTKVMVFYKHSF*VKSRAL Trigger: CAAGGCCCTTGATTTTACTCAGAAACTGTGCTTATA...GAATACCATAACCTTTGTTCTGAAGGAAAGTTGGTTATGTGTCAGGTGACTCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222464.2 |
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| 3UTR-3UTR GCA 90 bp | TGCAATTCTGCTAGAATATTGTATCTCACAACTGTAGCCTCCCTCAGCCTTGAACATACTCTACTGCCTTaGCTAAGTATTTTTATTCCT | + |
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Preference number: 2 (lower is better) Translates to: CNSARILYLTTVASLSLEHTLLP*LSIFIP Trigger: AGGAATAAAAATACTTAGGCAAGGCAGTAGAGTATG...TTCAAGGCTGAGGGAGGCTACAGTTGTGAGATACAATATTCTAGCAGAATTGCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000222464.2 |
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| 3UTR CCA 72 bp | AGAGAACCACAGTGGGTCCTTAAGGCAAGTGGTATGTaGCCTTCTGTAGGCTGTCCCAGGCAGCACCACCTT | + |
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Preference number: 3 (lower is better) Translates to: REPQWVLKASGM*PSVGCPRQHHL Trigger: AAGGTGGTGCTGCCTGGGACAGCCTACAGAAGGCCACATACCACTTGCCTTAAGGACCCACTGTGGTTCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002883.7 ENSMUST00000221810.2 ENSMUST00000222464.2 ENSMUST00000222992.2 |
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| 3UTR GCA 72 bp | ACGGGCCGGCATACAGCACGCAACAGTGAACACACTTaGCAGGTAGCTCCCAAGTCTCTGATAGGAGTGTTT | + |
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Preference number: 3 (lower is better) Translates to: TGRHTARNSEHT*QVAPKSLIGVF Trigger: AAACACTCCTATCAGAGACTTGGGAGCTACCTGGCAAGTGTGTTCACTGTTGCGTGCTGTATGCCGGCCCGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222464.2 |
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| 3UTR TCA 72 bp | ACAGGAGGTCTTACACAGTATGCACACAGACAACTGTaGATTCAGGTACCCTTCCACAAGCCTTCCCTCTTG | + |
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Preference number: 3 (lower is better) Translates to: TGGLTQYAHRQL*IQVPFHKPSLL Trigger: CAAGAGGGAAGGCTTGTGGAAGGGTACCTGAATTCACAGTTGTCTGTGTGCATACTGTGTAAGACCTCCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002883.7 ENSMUST00000221810.2 ENSMUST00000222464.2 ENSMUST00000222992.2 |
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| 3UTR TCA 72 bp | AATATTGTATCTCACAACTGTAGCCTCCCTCAGCCTTaGAGCAGGCTGATCCAGACTTTGACCTTGCTGCCT | + |
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Preference number: 3 (lower is better) Translates to: NIVSHNCSLPQP*SRLIQTLTLLP Trigger: AGGCAGCAAGGTCAAAGTCTGGATCAGCCTGCTTCAAGGCTGAGGGAGGCTACAGTTGTGAGATACAATATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222464.2 |
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| 3UTR GCA 72 bp | GATCAGAACCTTTGTCTTGGCTTCATTATCTTCTCTTaGAGTCTAAGTCTCTTTCAGCCCCAGCCTGCCTCC | + |
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Preference number: 3 (lower is better) Translates to: DQNLCLGFIIFS*SLSLFQPQPAS Trigger: GGAGGCAGGCTGGGGCTGAAAGAGACTTAGACTGCAAGAGAAGATAATGAAGCCAAGACAAAGGTTCTGATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222464.2 |
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| 3UTR TCA 72 bp | CAGATACCCTGGGCACTGTTGTCACAAGCAGTAAAATaGGCATGCAGAGTTTATTCTCACAGGACTGTAGAA | + |
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Preference number: 3 (lower is better) Translates to: QIPWALLSQAVK*ACRVYSHRTVE Trigger: TTCTACAGTCCTGTGAGAATAAACTCTGCATGCTCATTTTACTGCTTGTGACAACAGTGCCCAGGGTATCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222464.2 |
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| 3UTR TCA 72 bp | ACAAGTAACAGGGCTCTGTGGCTTAAAGCAAAACACTaGAGCTATCATTACGAGACATGCTGCAAGAAGTGT | + |
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Preference number: 3 (lower is better) Translates to: TSNRALWLKAKH*SYHYETCCKKC Trigger: ACACTTCTTGCAGCATGTCTCGTAATGATAGCTTCAGTGTTTTGCTTTAAGCCACAGAGCCCTGTTACTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000002883.7 ENSMUST00000221810.2 ENSMUST00000222464.2 ENSMUST00000222992.2 |
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| 3UTR GCA 72 bp | TTCTGTAATGTCACGGCAATTACTGTAGATTCCCTATaGTGGGCATTTGTCATGCATCCAGTGATTGGAAAG | + |
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Preference number: 3 (lower is better) Translates to: FCNVTAITVDSL*WAFVMHPVIGK Trigger: CTTTCCAATCACTGGATGCATGACAAATGCCCAGCATAGGGAATCTACAGTAATTGCCGTGACATTACAGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222464.2 |
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| 3UTR TCA 72 bp | CTTTTATGCTGTTCAGTTAATACCAGAAATGACCCGTaGGCTTTCATGTTAGTGCAGTTCTTCTGTAATGTC | + |
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Preference number: 3 (lower is better) Translates to: LLCCSVNTRNDP*AFMLVQFFCNV Trigger: GACATTACAGAAGAACTGCACTAACATGAAAGCTCACGGGTCATTTCTGGTATTAACTGAACAGCATAAAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222464.2 |
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| CDS-3UTR TCA 90 bp | GCCTTCTGTAGGCTGTCCCAGGCAGCACCACCTTATCCTGTAAGGGTGGCTCCAGGTTGGGCATCCGGGTaGTGTTCCAGGGCATGTGCC | + |
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Preference number: 4 (lower is better) Translates to: AFCRLSQAAPPYPVRVAPGWASG*CSRACA Trigger: GGCACATGCCCTGGAACATCACCCGGATGCCCAACC...TGGAGCCACCCTTACAGGATAAGGTGGTGCTGCCTGGGACAGCCTACAGAAGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002883.7 ENSMUST00000222464.2 |
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| CDS-3UTR CCA 90 bp | TGGTATGTGGCCTTCTGTAGGCTGTCCCAGGCAGCACCACCTTATCCTGTAAGGTCGTCACGTGCGCGCTaGCACACAGACTTGCAGGGC | + |
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Preference number: 4 (lower is better) Translates to: WYVAFCRLSQAAPPYPVRSSRAR*HTDLQG Trigger: GCCCTGCAAGTCTGTGTGCCAGCGCGCACGTGACGA...CCTTACAGGATAAGGTGGTGCTGCCTGGGACAGCCTACAGAAGGCCACATACCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002883.7 ENSMUST00000222464.2 |
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| CDS-3UTR CCA 90 bp | TGGTATGTGGCCTTCTGTAGGCTGTCCCAGGCAGCACCACCTTATCCTGTAAGGGCATGTGCCTGCACATaGGGATGCGCACAGCTTCGC | + |
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Preference number: 4 (lower is better) Translates to: WYVAFCRLSQAAPPYPVRACACT*GCAQLR Trigger: GCGAAGCTGTGCGCATCCCCATGTGCAGGCACATGC...CCTTACAGGATAAGGTGGTGCTGCCTGGGACAGCCTACAGAAGGCCACATACCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002883.7 ENSMUST00000222464.2 |
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| CDS-3UTR CCA 90 bp | GCCTCCCAGCTGTACCCGGTTCATGTAGGCCACGGGCCGGCATACAGCACGCAACTCTCTGGCCAGCTGTaGTTATACATCTTCATGAGG | + |
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Preference number: 4 (lower is better) Translates to: ASQLYPVHVGHGPAYSTQLSGQL*LYIFMR Trigger: CCTCATGAAGATGTATAACCACAGCTGGCCAGAGAG...TTGCGTGCTGTATGCCGGCCCGTGGCCTACATGAACCGGGTACAGCTGGGAGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222464.2 |
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| CDS-3UTR TCA 90 bp | GCAAGTGGTATGTGGCCTTCTGTAGGCTGTCCCAGGCAGCACCACCTTATCCTGCAGACTTGCAGGGCTTaGTGGGATCGTGCAGGAACT | + |
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Preference number: 4 (lower is better) Translates to: ASGMWPSVGCPRQHHLILQTCRA*WDRAGT Trigger: AGTTCCTGCACGATCCCATCAAGCCCTGCAAGTCTG...CAGGATAAGGTGGTGCTGCCTGGGACAGCCTACAGAAGGCCACATACCACTTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002883.7 ENSMUST00000222464.2 |
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| CDS-3UTR GCA 90 bp | TGGTATGTGGCCTTCTGTAGGCTGTCCCAGGCAGCACCACCTTATCCTGTAAGGAGCGCAGCACAGAGCTaGAGTTCACGTCCACTAGCT | + |
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Preference number: 4 (lower is better) Translates to: WYVAFCRLSQAAPPYPVRSAAQS*SSRPLA Trigger: AGCTAGTGGACGTGAACTGCAGCTCTGTGCTGCGCT...CCTTACAGGATAAGGTGGTGCTGCCTGGGACAGCCTACAGAAGGCCACATACCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002883.7 ENSMUST00000222464.2 |
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| CDS-3UTR CCA 90 bp | GTGGCCTTCTGTAGGCTGTCCCAGGCAGCACCACCTTATCCTGTAAGGGTGGCTAGGATATGTGGACACTaGCAGGAGGAATTGGTGATG | + |
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Preference number: 4 (lower is better) Translates to: VAFCRLSQAAPPYPVRVARICGH*QEELVM Trigger: CATCACCAATTCCTCCTGCCAGTGTCCACATATCCT...AGCCACCCTTACAGGATAAGGTGGTGCTGCCTGGGACAGCCTACAGAAGGCCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002883.7 ENSMUST00000221810.2 ENSMUST00000222464.2 ENSMUST00000222992.2 |
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| CDS-3UTR CCA 90 bp | GTGGCCTTCTGTAGGCTGTCCCAGGCAGCACCACCTTATCCTGTAAGGGTGGCTCCACTTCACATCTTCTaGAAGGTCAGTGACTATTGC | + |
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Preference number: 4 (lower is better) Translates to: VAFCRLSQAAPPYPVRVAPLHIF*KVSDYC Trigger: GCAATAGTCACTGACCTTCCAGAAGATGTGAAGTGG...AGCCACCCTTACAGGATAAGGTGGTGCTGCCTGGGACAGCCTACAGAAGGCCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002883.7 ENSMUST00000221810.2 ENSMUST00000222464.2 |
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| CDS-3UTR CCA 90 bp | TGGTATGTGGCCTTCTGTAGGCTGTCCCAGGCAGCACCACCTTATCCTGTAAGGATGGGGCAGGATATGTaGACACTGGCAGGAGGAATT | + |
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Preference number: 4 (lower is better) Translates to: WYVAFCRLSQAAPPYPVRMGQDM*TLAGGI Trigger: AATTCCTCCTGCCAGTGTCCACATATCCTGCCCCAT...CCTTACAGGATAAGGTGGTGCTGCCTGGGACAGCCTACAGAAGGCCACATACCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000002883.7 ENSMUST00000221810.2 ENSMUST00000222464.2 ENSMUST00000222992.2 |
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| CDS-3UTR TCA 90 bp | GCCTTCTGTAGGCTGTCCCAGGCAGCACCACCTTATCCTGTAAGGGTGGCTCCAGTATGGACCTTCTACTaGGTTGATCTCTCCACTTTT | + |
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Preference number: 4 (lower is better) Translates to: AFCRLSQAAPPYPVRVAPVWTFY*VDLSTF Trigger: AAAAGTGGAGAGATCAACTCAGTAGAAGGTCCATAC...TGGAGCCACCCTTACAGGATAAGGTGGTGCTGCCTGGGACAGCCTACAGAAGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002883.7 ENSMUST00000222992.2 |
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| CDS-3UTR GCA 90 bp | CTTCATTATCTTCTCTTGCAGTCTAAGTCTCTTTCAGCCCCAGCCTGCCTCCCAAGCGCAGCACAGAGCTaGAGTTCACGTCCACTAGCT | + |
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Preference number: 4 (lower is better) Translates to: LHYLLLQSKSLSAPACLPSAAQS*SSRPLA Trigger: AGCTAGTGGACGTGAACTGCAGCTCTGTGCTGCGCT...TGGGAGGCAGGCTGGGGCTGAAAGAGACTTAGACTGCAAGAGAAGATAATGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222464.2 |
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| CDS-3UTR GCA 90 bp | GCAAGTGGTATGTGGCCTTCTGTAGGCTGTCCCAGGCAGCACCACCTTATCCTGCATAGCTGTAGTTTTTaGTCAGGTATGTTGCCAGGG | + |
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Preference number: 4 (lower is better) Translates to: ASGMWPSVGCPRQHHLILHSCSF*SGMLPG Trigger: CCCTGGCAACATACCTGAGCAAAAACTACAGCTATG...CAGGATAAGGTGGTGCTGCCTGGGACAGCCTACAGAAGGCCACATACCACTTGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000002883.7 ENSMUST00000221810.2 ENSMUST00000222464.2 ENSMUST00000222992.2 |
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| CDS-3UTR TCA 90 bp | TGGTATGTGGCCTTCTGTAGGCTGTCCCAGGCAGCACCACCTTATCCTGTAAGGTGTTCGAGGGATAGGTaGCAAAGACTTGAAGATCTC | + |
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Preference number: 4 (lower is better) Translates to: WYVAFCRLSQAAPPYPVRCSRDR*QRLEDL Trigger: GAGATCTTCAAGTCTTTGTCACCTATCCCTCGAACA...CCTTACAGGATAAGGTGGTGCTGCCTGGGACAGCCTACAGAAGGCCACATACCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002883.7 ENSMUST00000221810.2 ENSMUST00000222464.2 ENSMUST00000222992.2 |
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| CDS-3UTR CCA 90 bp | CCTTCCACAAGCCTTCCCTCTTGTACTTTCCATACCAGAAAACCAACAAGTAACGCATGTGCCTGCACATaGGGATGCGCACAGCTTCGC | + |
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Preference number: 4 (lower is better) Translates to: PSTSLPSCTFHTRKPTSNACACT*GCAQLR Trigger: GCGAAGCTGTGCGCATCCCCATGTGCAGGCACATGC...GTTACTTGTTGGTTTTCTGGTATGGAAAGTACAAGAGGGAAGGCTTGTGGAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002883.7 ENSMUST00000222464.2 |
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| CDS-3UTR TCA 90 bp | CTTCCCTCTTGTACTTTCCATACCAGAAAACCAACAAGTAACAGGGCTCTGTGGCAGACTTGCAGGGCTTaGTGGGATCGTGCAGGAACT | + |
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Preference number: 4 (lower is better) Translates to: LPSCTFHTRKPTSNRALWQTCRA*WDRAGT Trigger: AGTTCCTGCACGATCCCATCAAGCCCTGCAAGTCTG...CCACAGAGCCCTGTTACTTGTTGGTTTTCTGGTATGGAAAGTACAAGAGGGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002883.7 ENSMUST00000222464.2 |
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| CDS-3UTR CCA 90 bp | GCACTTCTAGCTTTGATGTTCTTCTTAGGACTGGCAGGTTTGGGAGCAGGTGGCAGGATATGTGGACACTaGCAGGAGGAATTGGTGATG | + |
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Preference number: 4 (lower is better) Translates to: ALLALMFFLGLAGLGAGGRICGH*QEELVM Trigger: CATCACCAATTCCTCCTGCCAGTGTCCACATATCCT...GCCACCTGCTCCCAAACCTGCCAGTCCTAAGAAGAACATCAAAGCTAGAAGTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000221810.2 ENSMUST00000222464.2 |
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| CDS-3UTR CCA 90 bp | GCCTTCCCTCTTGTACTTTCCATACCAGAAAACCAACAAGTAACAGGGCTCTGTTGCGACTGGTGCGGCTaGCTATCTGCTTCTTGTCCT | + |
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Preference number: 4 (lower is better) Translates to: AFPLVLSIPENQQVTGLCCDWCG*LSASCP Trigger: AGGACAAGAAGCAGATAGCCAGCCGCACCAGTCGCA...ACAGAGCCCTGTTACTTGTTGGTTTTCTGGTATGGAAAGTACAAGAGGGAAGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002883.7 ENSMUST00000221810.2 ENSMUST00000222992.2 |
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| CDS-3UTR CCA 90 bp | AGTGTCTATAAAGAGAACCACAGTGGGTCCTTAAGGCAAGTGGTATGTGGCCTTTGCGACTGGTGCGGCTaGCTATCTGCTTCTTGTCCT | + |
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Preference number: 4 (lower is better) Translates to: SVYKENHSGSLRQVVCGLCDWCG*LSASCP Trigger: AGGACAAGAAGCAGATAGCCAGCCGCACCAGTCGCA...AAGGCCACATACCACTTGCCTTAAGGACCCACTGTGGTTCTCTTTATAGACACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002883.7 ENSMUST00000221810.2 ENSMUST00000222992.2 |
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| CDS-3UTR CCA 90 bp | TGCAATTCTGCTAGAATATTGTATCTCACAACTGTAGCCTCCCTCAGCCTTGAAGCGCCTGTGAGAGCTTaGAGAGAAGGCAGCGTGGAG | + |
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Preference number: 4 (lower is better) Translates to: CNSARILYLTTVASLSLEAPVRA*REGSVE Trigger: CTCCACGCTGCCTTCTCTCCAAGCTCTCACAGGCGC...TTCAAGGCTGAGGGAGGCTACAGTTGTGAGATACAATATTCTAGCAGAATTGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222464.2 |
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| CDS-3UTR TCA 90 bp | TTCTCACAGGACTGTAGAACCATTAAAAATTCTTGCCAAAATTCAGCGTTCTCCGGTTGGGCATCCGGGTaGTGTTCCAGGGCATGTGCC | + |
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Preference number: 4 (lower is better) Translates to: FSQDCRTIKNSCQNSAFSGWASG*CSRACA Trigger: GGCACATGCCCTGGAACATCACCCGGATGCCCAACC...GGAGAACGCTGAATTTTGGCAAGAATTTTTAATGGTTCTACAGTCCTGTGAGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000222464.2 |
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| CDS-3UTR TCA 90 bp | AGCTTTGATGTTCTTCTTAGGACTGGCAGGTTTGGGAGCAGGTGGCCTTCCCTTTGTTCGAGGGATAGGTaGCAAAGACTTGAAGATCTC | + |
|
Preference number: 4 (lower is better) Translates to: SFDVLLRTGRFGSRWPSLCSRDR*QRLEDL Trigger: GAGATCTTCAAGTCTTTGTCACCTATCCCTCGAACA...AAGGGAAGGCCACCTGCTCCCAAACCTGCCAGTCCTAAGAAGAACATCAAAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000221810.2 ENSMUST00000222464.2 |
||
| CDS-3UTR GCA 90 bp | CCTTCCACAAGCCTTCCCTCTTGTACTTTCCATACCAGAAAACCAACAAGTAACGGCTTGATGGGATCGTaGAGGAACTCCAGGGTACAG | + |
|
Preference number: 4 (lower is better) Translates to: PSTSLPSCTFHTRKPTSNGLMGS*RNSRVQ Trigger: CTGTACCCTGGAGTTCCTGCACGATCCCATCAAGCC...GTTACTTGTTGGTTTTCTGGTATGGAAAGTACAAGAGGGAAGGCTTGTGGAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002883.7 ENSMUST00000222464.2 |
||
| CDS-3UTR CCA 90 bp | CCTTCCACAAGCCTTCCCTCTTGTACTTTCCATACCAGAAAACCAACAAGTAACGCAGGCCAGGCTCTCTaGCCAGCTGTGGTTATACAT | + |
|
Preference number: 4 (lower is better) Translates to: PSTSLPSCTFHTRKPTSNAGQAL*PAVVIH Trigger: ATGTATAACCACAGCTGGCCAGAGAGCCTGGCCTGC...GTTACTTGTTGGTTTTCTGGTATGGAAAGTACAAGAGGGAAGGCTTGTGGAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002883.7 ENSMUST00000222464.2 |
||
| CDS-3UTR CCA 90 bp | CCTCTTGTACTTTCCATACCAGAAAACCAACAAGTAACAGGGCTCTGTGGCTTAGCAGGCCAGGCTCTCTaGCCAGCTGTGGTTATACAT | + |
|
Preference number: 4 (lower is better) Translates to: PLVLSIPENQQVTGLCGLAGQAL*PAVVIH Trigger: ATGTATAACCACAGCTGGCCAGAGAGCCTGGCCTGC...TAAGCCACAGAGCCCTGTTACTTGTTGGTTTTCTGGTATGGAAAGTACAAGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002883.7 ENSMUST00000222464.2 |
||
| CDS-3UTR CCA 90 bp | CTTCATTATCTTCTCTTGCAGTCTAAGTCTCTTTCAGCCCCAGCCTGCCTCCCAAGGATATGTGGACACTaGCAGGAGGAATTGGTGATG | + |
|
Preference number: 4 (lower is better) Translates to: LHYLLLQSKSLSAPACLPRICGH*QEELVM Trigger: CATCACCAATTCCTCCTGCCAGTGTCCACATATCCT...TGGGAGGCAGGCTGGGGCTGAAAGAGACTTAGACTGCAAGAGAAGATAATGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222464.2 |
||
| CDS-3UTR CCA 90 bp | ACCCTTCCACAAGCCTTCCCTCTTGTACTTTCCATACCAGAAAACCAACAAGTATGCGACTGGTGCGGCTaGCTATCTGCTTCTTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: TLPQAFPLVLSIPENQQVCDWCG*LSASCP Trigger: AGGACAAGAAGCAGATAGCCAGCCGCACCAGTCGCA...TACTTGTTGGTTTTCTGGTATGGAAAGTACAAGAGGGAAGGCTTGTGGAAGGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002883.7 ENSMUST00000221810.2 ENSMUST00000222992.2 |
||
| CDS-3UTR TCA 90 bp | GCTGCAAGAAGTGTCTATAAAGAGAACCACAGTGGGTCCTTAAGGCAAGTGGTACTTCTGGAAGGTCAGTaGCTATTGCCTCTGGAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: AARSVYKENHSGSLRQVVLLEGQ*LLPLER Trigger: TCTCTCCAGAGGCAATAGTCACTGACCTTCCAGAAG...TACCACTTGCCTTAAGGACCCACTGTGGTTCTCTTTATAGACACTTCTTGCAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002883.7 ENSMUST00000221810.2 ENSMUST00000222464.2 |
||
| CDS-3UTR GCA 90 bp | CCTCTTGTACTTTCCATACCAGAAAACCAACAAGTAACAGGGCTCTGTGGCTTATCGGCTTCACCTTTTTaGACTTGCACCGATCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: PLVLSIPENQQVTGLCGLSASPF*TCTDQG Trigger: GCCCTGATCGGTGCAAGTGCAAAAAGGTGAAGCCGA...TAAGCCACAGAGCCCTGTTACTTGTTGGTTTTCTGGTATGGAAAGTACAAGAGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000002883.7 ENSMUST00000221810.2 ENSMUST00000222464.2 ENSMUST00000222992.2 |
||
| CDS-3UTR CCA 90 bp | TTCCCTCTTGTACTTTCCATACCAGAAAACCAACAAGTAACAGGGCTCTGTGGCACTCCAGGGTACAGATaGGTGCGTACATGGCACAAA | + |
|
Preference number: 4 (lower is better) Translates to: FPLVLSIPENQQVTGLCGTPGYR*VRTWHK Trigger: TTTGTGCCATGTACGCACCCATCTGTACCCTGGAGT...GCCACAGAGCCCTGTTACTTGTTGGTTTTCTGGTATGGAAAGTACAAGAGGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002883.7 ENSMUST00000222464.2 |
||
| CDS-3UTR CCA 90 bp | CTTCCCTCTTGTACTTTCCATACCAGAAAACCAACAAGTAACAGGGCTCTGTGGATGGGGCAGGATATGTaGACACTGGCAGGAGGAATT | + |
|
Preference number: 4 (lower is better) Translates to: LPSCTFHTRKPTSNRALWMGQDM*TLAGGI Trigger: AATTCCTCCTGCCAGTGTCCACATATCCTGCCCCAT...CCACAGAGCCCTGTTACTTGTTGGTTTTCTGGTATGGAAAGTACAAGAGGGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000002883.7 ENSMUST00000221810.2 ENSMUST00000222464.2 ENSMUST00000222992.2 |
||
| CDS-3UTR CCA 90 bp | TTCCCTCTTGTACTTTCCATACCAGAAAACCAACAAGTAACAGGGCTCTGTGGCATGGGGCAGGATATGTaGACACTGGCAGGAGGAATT | + |
|
Preference number: 4 (lower is better) Translates to: FPLVLSIPENQQVTGLCGMGQDM*TLAGGI Trigger: AATTCCTCCTGCCAGTGTCCACATATCCTGCCCCAT...GCCACAGAGCCCTGTTACTTGTTGGTTTTCTGGTATGGAAAGTACAAGAGGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000002883.7 ENSMUST00000221810.2 ENSMUST00000222464.2 ENSMUST00000222992.2 |
||
| CDS-3UTR TCA 90 bp | CTTTCCATACCAGAAAACCAACAAGTAACAGGGCTCTGTGGCTTAAAGCAAAACGGTTATACATCTTCATaGGGGGCTCGCAGTCGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: LSIPENQQVTGLCGLKQNGYTSS*GARSRH Trigger: GTGACGACTGCGAGCCCCTCATGAAGATGTATAACC...GTTTTGCTTTAAGCCACAGAGCCCTGTTACTTGTTGGTTTTCTGGTATGGAAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000002883.7 ENSMUST00000222464.2 |
||
| CDS-3UTR TCA 90 bp | CCTCTTGTACTTTCCATACCAGAAAACCAACAAGTAACAGGGCTCTGTGGCTTACTTCTGGAAGGTCAGTaGCTATTGCCTCTGGAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: PLVLSIPENQQVTGLCGLLLEGQ*LLPLER Trigger: TCTCTCCAGAGGCAATAGTCACTGACCTTCCAGAAG...TAAGCCACAGAGCCCTGTTACTTGTTGGTTTTCTGGTATGGAAAGTACAAGAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002883.7 ENSMUST00000221810.2 ENSMUST00000222464.2 |
||
| CDS-3UTR GCA 90 bp | CAAGTAACAGGGCTCTGTGGCTTAAAGCAAAACACTGAAGCTATCATTACGAGATCGGCTTCACCTTTTTaGACTTGCACCGATCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: QVTGLCGLKQNTEAIITRSASPF*TCTDQG Trigger: GCCCTGATCGGTGCAAGTGCAAAAAGGTGAAGCCGA...TCTCGTAATGATAGCTTCAGTGTTTTGCTTTAAGCCACAGAGCCCTGTTACTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000002883.7 ENSMUST00000221810.2 ENSMUST00000222464.2 ENSMUST00000222992.2 |
||
| CDS-3UTR CCA 90 bp | TTCCCTCTTGTACTTTCCATACCAGAAAACCAACAAGTAACAGGGCTCTGTGGCCTCTCTGGCCAGCTGTaGTTATACATCTTCATGAGG | + |
|
Preference number: 4 (lower is better) Translates to: FPLVLSIPENQQVTGLCGLSGQL*LYIFMR Trigger: CCTCATGAAGATGTATAACCACAGCTGGCCAGAGAG...GCCACAGAGCCCTGTTACTTGTTGGTTTTCTGGTATGGAAAGTACAAGAGGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002883.7 ENSMUST00000222464.2 |
||
| CDS-3UTR CCA 90 bp | AGCTTTGATGTTCTTCTTAGGACTGGCAGGTTTGGGAGCAGGTGGCCTTCCCTTTTGCACCATCATATCTaGTGTGATGTCTATCCACTT | + |
|
Preference number: 4 (lower is better) Translates to: SFDVLLRTGRFGSRWPSLLHHHI*CDVYPL Trigger: AAGTGGATAGACATCACACCAGATATGATGGTGCAA...AAGGGAAGGCCACCTGCTCCCAAACCTGCCAGTCCTAAGAAGAACATCAAAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000221810.2 ENSMUST00000222464.2 |
||
| CDS-3UTR CCA 90 bp | GCACTTCTAGCTTTGATGTTCTTCTTAGGACTGGCAGGTTTGGGAGCAGGTGGCTTGCACCATCATATCTaGTGTGATGTCTATCCACTT | + |
|
Preference number: 4 (lower is better) Translates to: ALLALMFFLGLAGLGAGGLHHHI*CDVYPL Trigger: AAGTGGATAGACATCACACCAGATATGATGGTGCAA...GCCACCTGCTCCCAAACCTGCCAGTCCTAAGAAGAACATCAAAGCTAGAAGTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000221810.2 ENSMUST00000222464.2 |
||
| CDS-3UTR CCA 90 bp | GCCTTCCCTCTTGTACTTTCCATACCAGAAAACCAACAAGTAACAGGGCTCTGTAGGATATGTGGACACTaGCAGGAGGAATTGGTGATG | + |
|
Preference number: 4 (lower is better) Translates to: AFPLVLSIPENQQVTGLCRICGH*QEELVM Trigger: CATCACCAATTCCTCCTGCCAGTGTCCACATATCCT...ACAGAGCCCTGTTACTTGTTGGTTTTCTGGTATGGAAAGTACAAGAGGGAAGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000002883.7 ENSMUST00000221810.2 ENSMUST00000222464.2 ENSMUST00000222992.2 |
||
| CDS-3UTR TCA 90 bp | GCCTTCCCTCTTGTACTTTCCATACCAGAAAACCAACAAGTAACAGGGCTCTGTGCCACTCATAACACATaGTTAGGACATCTTGATGGG | + |
|
Preference number: 4 (lower is better) Translates to: AFPLVLSIPENQQVTGLCATHNT*LGHLDG Trigger: CCCATCAAGATGTCCTAATCATGTGTTATGAGTGGC...ACAGAGCCCTGTTACTTGTTGGTTTTCTGGTATGGAAAGTACAAGAGGGAAGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000002883.7 ENSMUST00000221810.2 ENSMUST00000222464.2 ENSMUST00000222992.2 |
||
| CDS-3UTR GCA 90 bp | TTCTCACAGGACTGTAGAACCATTAAAAATTCTTGCCAAAATTCAGCGTTCTCCGGCTTGATGGGATCGTaGAGGAACTCCAGGGTACAG | + |
|
Preference number: 4 (lower is better) Translates to: FSQDCRTIKNSCQNSAFSGLMGS*RNSRVQ Trigger: CTGTACCCTGGAGTTCCTGCACGATCCCATCAAGCC...GGAGAACGCTGAATTTTGGCAAGAATTTTTAATGGTTCTACAGTCCTGTGAGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000222464.2 |
||
| CDS-3UTR CCA 90 bp | TTCCCTCTTGTACTTTCCATACCAGAAAACCAACAAGTAACAGGGCTCTGTGGCTTGCAACCACTCCTCTaGACGGCTTTTATTTTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: FPLVLSIPENQQVTGLCGLQPLL*TAFILA Trigger: TGCCAAAATAAAAGCCGTCCAGAGGAGTGGTTGCAA...GCCACAGAGCCCTGTTACTTGTTGGTTTTCTGGTATGGAAAGTACAAGAGGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000002883.7 ENSMUST00000221810.2 ENSMUST00000222464.2 ENSMUST00000222992.2 |
||
| CDS-3UTR CCA 90 bp | AGTGTCTATAAAGAGAACCACAGTGGGTCCTTAAGGCAAGTGGTATGTGGCCTTTTGCAACCACTCCTCTaGACGGCTTTTATTTTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: SVYKENHSGSLRQVVCGLLQPLL*TAFILA Trigger: TGCCAAAATAAAAGCCGTCCAGAGGAGTGGTTGCAA...AAGGCCACATACCACTTGCCTTAAGGACCCACTGTGGTTCTCTTTATAGACACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000002883.7 ENSMUST00000221810.2 ENSMUST00000222464.2 ENSMUST00000222992.2 |
||
| CDS-3UTR CCA 90 bp | GCCTTCCCTCTTGTACTTTCCATACCAGAAAACCAACAAGTAACAGGGCTCTGTTTGCAACCACTCCTCTaGACGGCTTTTATTTTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: AFPLVLSIPENQQVTGLCLQPLL*TAFILA Trigger: TGCCAAAATAAAAGCCGTCCAGAGGAGTGGTTGCAA...ACAGAGCCCTGTTACTTGTTGGTTTTCTGGTATGGAAAGTACAAGAGGGAAGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000002883.7 ENSMUST00000221810.2 ENSMUST00000222464.2 ENSMUST00000222992.2 |
||
| CDS-3UTR TCA 90 bp | GCCTTCCCTCTTGTACTTTCCATACCAGAAAACCAACAAGTAACAGGGCTCTGTCCATCATATCTGGTGTaGTGTCTATCCACTTCACAT | + |
|
Preference number: 4 (lower is better) Translates to: AFPLVLSIPENQQVTGLCPSYLV*CLSTSH Trigger: ATGTGAAGTGGATAGACATCACACCAGATATGATGG...ACAGAGCCCTGTTACTTGTTGGTTTTCTGGTATGGAAAGTACAAGAGGGAAGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002883.7 ENSMUST00000221810.2 ENSMUST00000222464.2 |
||
| CDS-3UTR TCA 90 bp | TTCCCTCTTGTACTTTCCATACCAGAAAACCAACAAGTAACAGGGCTCTGTGGCCTATGGACCTTCTACTaGGTTGATCTCTCCACTTTT | + |
|
Preference number: 4 (lower is better) Translates to: FPLVLSIPENQQVTGLCGLWTFY*VDLSTF Trigger: AAAAGTGGAGAGATCAACTCAGTAGAAGGTCCATAG...GCCACAGAGCCCTGTTACTTGTTGGTTTTCTGGTATGGAAAGTACAAGAGGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000221810.2 ENSMUST00000222464.2 |
||
| CDS-3UTR GCA 90 bp | GCTGCAAGAAGTGTCTATAAAGAGAACCACAGTGGGTCCTTAAGGCAAGTGGTATCAAAGGACCTTTCTTaGACCATCATATCTGGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: AARSVYKENHSGSLRQVVSKDLS*TIISGV Trigger: CACACCAGATATGATGGTGCAAGAAAGGTCCTTTGA...TACCACTTGCCTTAAGGACCCACTGTGGTTCTCTTTATAGACACTTCTTGCAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002883.7 ENSMUST00000221810.2 ENSMUST00000222464.2 |
||
| CDS-3UTR GCA 90 bp | ACCCTTCCACAAGCCTTCCCTCTTGTACTTTCCATACCAGAAAACCAACAAGTACATAGCTGTAGTTTTTaGTCAGGTATGTTGCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: TLPQAFPLVLSIPENQQVHSCSF*SGMLPG Trigger: CCCTGGCAACATACCTGAGCAAAAACTACAGCTATG...TACTTGTTGGTTTTCTGGTATGGAAAGTACAAGAGGGAAGGCTTGTGGAAGGGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000002883.7 ENSMUST00000221810.2 ENSMUST00000222464.2 ENSMUST00000222992.2 |
||
| CDS-3UTR GCA 90 bp | CCTTCCACAAGCCTTCCCTCTTGTACTTTCCATACCAGAAAACCAACAAGTAACCATAGCTGTAGTTTTTaGTCAGGTATGTTGCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: PSTSLPSCTFHTRKPTSNHSCSF*SGMLPG Trigger: CCCTGGCAACATACCTGAGCAAAAACTACAGCTATG...GTTACTTGTTGGTTTTCTGGTATGGAAAGTACAAGAGGGAAGGCTTGTGGAAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000002883.7 ENSMUST00000221810.2 ENSMUST00000222464.2 ENSMUST00000222992.2 |
||
| CDS-3UTR CCA 90 bp | TCTTGTACTTTCCATACCAGAAAACCAACAAGTAACAGGGCTCTGTGGCTTAAAACTCCAGGGTACAGATaGGTGCGTACATGGCACAAA | + |
|
Preference number: 4 (lower is better) Translates to: SCTFHTRKPTSNRALWLKTPGYR*VRTWHK Trigger: TTTGTGCCATGTACGCACCCATCTGTACCCTGGAGT...TTTAAGCCACAGAGCCCTGTTACTTGTTGGTTTTCTGGTATGGAAAGTACAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002883.7 ENSMUST00000222464.2 |
||
| CDS-3UTR CCA 90 bp | TCTTGTACTTTCCATACCAGAAAACCAACAAGTAACAGGGCTCTGTGGCTTAAAATGGGGCAGGATATGTaGACACTGGCAGGAGGAATT | + |
|
Preference number: 4 (lower is better) Translates to: SCTFHTRKPTSNRALWLKMGQDM*TLAGGI Trigger: AATTCCTCCTGCCAGTGTCCACATATCCTGCCCCAT...TTTAAGCCACAGAGCCCTGTTACTTGTTGGTTTTCTGGTATGGAAAGTACAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000002883.7 ENSMUST00000221810.2 ENSMUST00000222464.2 ENSMUST00000222992.2 |
||
| CDS-3UTR TCA 90 bp | CCTCTTGTACTTTCCATACCAGAAAACCAACAAGTAACAGGGCTCTGTGGCTTACCATCATATCTGGTGTaGTGTCTATCCACTTCACAT | + |
|
Preference number: 4 (lower is better) Translates to: PLVLSIPENQQVTGLCGLPSYLV*CLSTSH Trigger: ATGTGAAGTGGATAGACATCACACCAGATATGATGG...TAAGCCACAGAGCCCTGTTACTTGTTGGTTTTCTGGTATGGAAAGTACAAGAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002883.7 ENSMUST00000221810.2 ENSMUST00000222464.2 |
||
| CDS-3UTR TCA 90 bp | GTAAGGGTGGCTCCATCACAGAAAGTAATTAGCTTGCGCTTTTCTTCAGGTTTGCCATCATATCTGGTGTaGTGTCTATCCACTTCACAT | + |
|
Preference number: 4 (lower is better) Translates to: VRVAPSQKVISLRFSSGLPSYLV*CLSTSH Trigger: ATGTGAAGTGGATAGACATCACACCAGATATGATGG...CAAACCTGAAGAAAAGCGCAAGCTAATTACTTTCTGTGATGGAGCCACCCTTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000221810.2 ENSMUST00000222464.2 |
||
| CDS-3UTR TCA 90 bp | CTTTCCATACCAGAAAACCAACAAGTAACAGGGCTCTGTGGCTTAAAGCAAAACGCCACTCATAACACATaGTTAGGACATCTTGATGGG | + |
|
Preference number: 4 (lower is better) Translates to: LSIPENQQVTGLCGLKQNATHNT*LGHLDG Trigger: CCCATCAAGATGTCCTAATCATGTGTTATGAGTGGC...GTTTTGCTTTAAGCCACAGAGCCCTGTTACTTGTTGGTTTTCTGGTATGGAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000002883.7 ENSMUST00000221810.2 ENSMUST00000222464.2 ENSMUST00000222992.2 |
||
| CDS-3UTR CCA 90 bp | CAACAAGTAACAGGGCTCTGTGGCTTAAAGCAAAACACTGAAGCTATCATTACGCCACTTCACATCTTCTaGAAGGTCAGTGACTATTGC | + |
|
Preference number: 4 (lower is better) Translates to: QQVTGLCGLKQNTEAIITPLHIF*KVSDYC Trigger: GCAATAGTCACTGACCTTCCAGAAGATGTGAAGTGG...CGTAATGATAGCTTCAGTGTTTTGCTTTAAGCCACAGAGCCCTGTTACTTGTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002883.7 ENSMUST00000221810.2 ENSMUST00000222464.2 |
||
| CDS-3UTR CCA 90 bp | CTTTCCATACCAGAAAACCAACAAGTAACAGGGCTCTGTGGCTTAAAGCAAAACTTGCAACCACTCCTCTaGACGGCTTTTATTTTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LSIPENQQVTGLCGLKQNLQPLL*TAFILA Trigger: TGCCAAAATAAAAGCCGTCCAGAGGAGTGGTTGCAA...GTTTTGCTTTAAGCCACAGAGCCCTGTTACTTGTTGGTTTTCTGGTATGGAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000002883.7 ENSMUST00000221810.2 ENSMUST00000222464.2 ENSMUST00000222992.2 |
||
| CDS-3UTR TCA 90 bp | GTGGCTCCATCACAGAAAGTAATTAGCTTGCGCTTTTCTTCAGGTTTGACTTTTTGTTCGAGGGATAGGTaGCAAAGACTTGAAGATCTC | + |
|
Preference number: 4 (lower is better) Translates to: VAPSQKVISLRFSSGLTFCSRDR*QRLEDL Trigger: GAGATCTTCAAGTCTTTGTCACCTATCCCTCGAACA...AAAAGTCAAACCTGAAGAAAAGCGCAAGCTAATTACTTTCTGTGATGGAGCCAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000221810.2 ENSMUST00000222464.2 |
||
| CDS-3UTR TCA 90 bp | AACCAACAAGTAACAGGGCTCTGTGGCTTAAAGCAAAACACTGAAGCTATCATTTGTTCGAGGGATAGGTaGCAAAGACTTGAAGATCTC | + |
|
Preference number: 4 (lower is better) Translates to: NQQVTGLCGLKQNTEAIICSRDR*QRLEDL Trigger: GAGATCTTCAAGTCTTTGTCACCTATCCCTCGAACA...AATGATAGCTTCAGTGTTTTGCTTTAAGCCACAGAGCCCTGTTACTTGTTGGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000002883.7 ENSMUST00000221810.2 ENSMUST00000222464.2 ENSMUST00000222992.2 |
||
| CDS-3UTR TCA 90 bp | AACCAACAAGTAACAGGGCTCTGTGGCTTAAAGCAAAACACTGAAGCTATCATTGCCACTCATAACACATaGTTAGGACATCTTGATGGG | + |
|
Preference number: 4 (lower is better) Translates to: NQQVTGLCGLKQNTEAIIATHNT*LGHLDG Trigger: CCCATCAAGATGTCCTAATCATGTGTTATGAGTGGC...AATGATAGCTTCAGTGTTTTGCTTTAAGCCACAGAGCCCTGTTACTTGTTGGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000002883.7 ENSMUST00000221810.2 ENSMUST00000222464.2 ENSMUST00000222992.2 |
||
| CDS-3UTR TCA 90 bp | CAACAAGTAACAGGGCTCTGTGGCTTAAAGCAAAACACTGAAGCTATCATTACGGTATGGACCTTCTACTaGGTTGATCTCTCCACTTTT | + |
|
Preference number: 4 (lower is better) Translates to: QQVTGLCGLKQNTEAIITVWTFY*VDLSTF Trigger: AAAAGTGGAGAGATCAACTCAGTAGAAGGTCCATAC...CGTAATGATAGCTTCAGTGTTTTGCTTTAAGCCACAGAGCCCTGTTACTTGTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002883.7 ENSMUST00000222992.2 |
||
| CDS-3UTR TCA 90 bp | CAAGTAACAGGGCTCTGTGGCTTAAAGCAAAACACTGAAGCTATCATTACGAGACTATGGACCTTCTACTaGGTTGATCTCTCCACTTTT | + |
|
Preference number: 4 (lower is better) Translates to: QVTGLCGLKQNTEAIITRLWTFY*VDLSTF Trigger: AAAAGTGGAGAGATCAACTCAGTAGAAGGTCCATAG...TCTCGTAATGATAGCTTCAGTGTTTTGCTTTAAGCCACAGAGCCCTGTTACTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000221810.2 ENSMUST00000222464.2 |
||
| CDS-3UTR GCA 90 bp | GTGGCTCCATCACAGAAAGTAATTAGCTTGCGCTTTTCTTCAGGTTTGACTTTTCATAGCTGTAGTTTTTaGTCAGGTATGTTGCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: VAPSQKVISLRFSSGLTFHSCSF*SGMLPG Trigger: CCCTGGCAACATACCTGAGCAAAAACTACAGCTATG...AAAAGTCAAACCTGAAGAAAAGCGCAAGCTAATTACTTTCTGTGATGGAGCCAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000221810.2 ENSMUST00000222464.2 |
||
| CDS-3UTR CCA 90 bp | TTCTCACAGGACTGTAGAACCATTAAAAATTCTTGCCAAAATTCAGCGTTCTCCGAGAAGCCCCATCTGTaGGATTTCTTACCTTCATGG | + |
|
Preference number: 4 (lower is better) Translates to: FSQDCRTIKNSCQNSAFSEKPHL*DFLPSW Trigger: CCATGAAGGTAAGAAATCCCACAGATGGGGCTTCTC...GGAGAACGCTGAATTTTGGCAAGAATTTTTAATGGTTCTACAGTCCTGTGAGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000222464.2 |
||
| CDS-3UTR TCA 90 bp | TTCTCACAGGACTGTAGAACCATTAAAAATTCTTGCCAAAATTCAGCGTTCTCCGCCACTCATAACACATaGTTAGGACATCTTGATGGG | + |
|
Preference number: 4 (lower is better) Translates to: FSQDCRTIKNSCQNSAFSATHNT*LGHLDG Trigger: CCCATCAAGATGTCCTAATCATGTGTTATGAGTGGC...GGAGAACGCTGAATTTTGGCAAGAATTTTTAATGGTTCTACAGTCCTGTGAGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000222464.2 |
||
| CDS-3UTR CCA 90 bp | TTCTCACAGGACTGTAGAACCATTAAAAATTCTTGCCAAAATTCAGCGTTCTCCCCACTTCACATCTTCTaGAAGGTCAGTGACTATTGC | + |
|
Preference number: 4 (lower is better) Translates to: FSQDCRTIKNSCQNSAFSPLHIF*KVSDYC Trigger: GCAATAGTCACTGACCTTCCAGAAGATGTGAAGTGG...GGAGAACGCTGAATTTTGGCAAGAATTTTTAATGGTTCTACAGTCCTGTGAGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000222464.2 |
||
| CDS-3UTR CCA 90 bp | CTTTCCATACCAGAAAACCAACAAGTAACAGGGCTCTGTGGCTTAAAGCAAAACTTGCACCATCATATCTaGTGTGATGTCTATCCACTT | + |
|
Preference number: 4 (lower is better) Translates to: LSIPENQQVTGLCGLKQNLHHHI*CDVYPL Trigger: AAGTGGATAGACATCACACCAGATATGATGGTGCAA...GTTTTGCTTTAAGCCACAGAGCCCTGTTACTTGTTGGTTTTCTGGTATGGAAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002883.7 ENSMUST00000221810.2 ENSMUST00000222464.2 |
||
| 3UTR CAA 72 bp | TATAATGGGAACCAGAAATGCAATTCTGCTAGAATATaGTATCTCACAACTGTAGCCTCCCTCAGCCTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: YNGNQKCNSARI*YLTTVASLSLE Trigger: TTCAAGGCTGAGGGAGGCTACAGTTGTGAGATACAATATTCTAGCAGAATTGCATTTCTGGTTCCCATTATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222464.2 |
||
| CDS-3UTR CAA 90 bp | TGGTATGTGGCCTTCTGTAGGCTGTCCCAGGCAGCACCACCTTATCCTGTAAGGCGCTGGCACACAGACTaGCAGGGCTTGATGGGATCG | + |
|
Preference number: 5 (lower is better) Translates to: WYVAFCRLSQAAPPYPVRRWHTD*QGLMGS Trigger: CGATCCCATCAAGCCCTGCAAGTCTGTGTGCCAGCG...CCTTACAGGATAAGGTGGTGCTGCCTGGGACAGCCTACAGAAGGCCACATACCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002883.7 ENSMUST00000222464.2 |
||
| CDS-3UTR CAA 90 bp | GTGGCCTTCTGTAGGCTGTCCCAGGCAGCACCACCTTATCCTGTAAGGGTGGCTACAGTTGTGACCTCATaGCAACCACTCCTCTGGACG | + |
|
Preference number: 5 (lower is better) Translates to: VAFCRLSQAAPPYPVRVATVVTS*QPLLWT Trigger: CGTCCAGAGGAGTGGTTGCAATGAGGTCACAACTGT...AGCCACCCTTACAGGATAAGGTGGTGCTGCCTGGGACAGCCTACAGAAGGCCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002883.7 ENSMUST00000221810.2 ENSMUST00000222464.2 ENSMUST00000222992.2 |
||
| CDS-3UTR CAA 90 bp | GTGGCCTTCTGTAGGCTGTCCCAGGCAGCACCACCTTATCCTGTAAGGGTGGCTCACTGGCAGGAGGAATaGGTGATGAGAGGGACTTGT | + |
|
Preference number: 5 (lower is better) Translates to: VAFCRLSQAAPPYPVRVAHWQEE*VMRGTC Trigger: ACAAGTCCCTCTCATCACCAATTCCTCCTGCCAGTG...AGCCACCCTTACAGGATAAGGTGGTGCTGCCTGGGACAGCCTACAGAAGGCCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002883.7 ENSMUST00000221810.2 ENSMUST00000222464.2 ENSMUST00000222992.2 |
||
| CDS-3UTR CAA 90 bp | GTGGCCTTCTGTAGGCTGTCCCAGGCAGCACCACCTTATCCTGTAAGGGTGGCTTTCACCTTTTTGCACTaGCACCGATCAGGGCTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: VAFCRLSQAAPPYPVRVAFTFLH*HRSGLR Trigger: TCTGAGCCCTGATCGGTGCAAGTGCAAAAAGGTGAA...AGCCACCCTTACAGGATAAGGTGGTGCTGCCTGGGACAGCCTACAGAAGGCCAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000002883.7 ENSMUST00000221810.2 ENSMUST00000222464.2 ENSMUST00000222992.2 |
||
| CDS TCA 90 bp | TTCTTAACTGCAGATTCAAACAGCACATGCTCTCCATGGCGCCTGTaGGAGCTTGGAGAGAAGGCAGCGTGGAGAAGCCCCATCTGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: FLTADSNSTCSPWRL*ELGEKAAWRSPICG Trigger: CCCACAGATGGGGCTTCTCCACGCTGCCTTCTCTCCAAGCTCTCACAGGCGCCATGGAGAGCATGTGCTGTTTGAATCTGCAGTTAAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222464.2 |
||
| CDS CCA 90 bp | CCTGTGAGAGCTTGGAGAGAAGGCAGCGTGGAGAAGCCCCATCTGTaGGATTTCTTACCTTCATGGCTACAGGTTCCCACCATGTTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: PVRAWREGSVEKPHL*DFLPSWLQVPTMLL Trigger: CAGCAACATGGTGGGAACCTGTAGCCATGAAGGTAAGAAATCCCACAGATGGGGCTTCTCCACGCTGCCTTCTCTCCAAGCTCTCACAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222464.2 |
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| CDS-3UTR CAA 90 bp | GCAAGTGGTATGTGGCCTTCTGTAGGCTGTCCCAGGCAGCACCACCTTATCCTGTTCACCTTTTTGCACTaGCACCGATCAGGGCTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: ASGMWPSVGCPRQHHLILFTFLH*HRSGLR Trigger: TCTGAGCCCTGATCGGTGCAAGTGCAAAAAGGTGAA...CAGGATAAGGTGGTGCTGCCTGGGACAGCCTACAGAAGGCCACATACCACTTGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000002883.7 ENSMUST00000221810.2 ENSMUST00000222464.2 ENSMUST00000222992.2 |
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| CDS-3UTR CAA 90 bp | GCCTTCTGTAGGCTGTCCCAGGCAGCACCACCTTATCCTGTAAGGGTGGCTCCAGGGGCACTTCTAGCTTaGATGTTCTTCTTAGGACTG | + |
|
Preference number: 5 (lower is better) Translates to: AFCRLSQAAPPYPVRVAPGALLA*MFFLGL Trigger: CAGTCCTAAGAAGAACATCAAAGCTAGAAGTGCCCC...TGGAGCCACCCTTACAGGATAAGGTGGTGCTGCCTGGGACAGCCTACAGAAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002883.7 ENSMUST00000222992.2 |
||
| CDS-3UTR CAA 90 bp | GTGGCCTTCTGTAGGCTGTCCCAGGCAGCACCACCTTATCCTGTAAGGGTGGCTCAGGTTCCCACCATGTaGCTGATTATACTTACTATG | + |
|
Preference number: 5 (lower is better) Translates to: VAFCRLSQAAPPYPVRVAQVPTM*LIILTM Trigger: CATAGTAAGTATAATCAGCAACATGGTGGGAACCTG...AGCCACCCTTACAGGATAAGGTGGTGCTGCCTGGGACAGCCTACAGAAGGCCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000221810.2 ENSMUST00000222464.2 |
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| CDS-3UTR CAA 90 bp | GCCTTCTGTAGGCTGTCCCAGGCAGCACCACCTTATCCTGTAAGGGTGGCTCCACAGGTTCCCACCATGTaGCTGATTATACTTACTATG | + |
|
Preference number: 5 (lower is better) Translates to: AFCRLSQAAPPYPVRVAPQVPTM*LIILTM Trigger: CATAGTAAGTATAATCAGCAACATGGTGGGAACCTG...TGGAGCCACCCTTACAGGATAAGGTGGTGCTGCCTGGGACAGCCTACAGAAGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000221810.2 ENSMUST00000222464.2 |
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| CDS GCA 90 bp | TTTTGCTCAGGTATGTTGCCAGGGTCGGCTTCACCTTTTTGCACTTaGACCGATCAGGGCTCAGACGTTTACAGTCAGCATCAAAGGACC | + |
|
Preference number: 5 (lower is better) Translates to: FCSGMLPGSASPFCT*TDQGSDVYSQHQRT Trigger: GGTCCTTTGATGCTGACTGTAAACGTCTGAGCCCTGATCGGTGCAAGTGCAAAAAGGTGAAGCCGACCCTGGCAACATACCTGAGCAAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000002883.7 ENSMUST00000221810.2 ENSMUST00000222464.2 ENSMUST00000222992.2 |
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| CDS-3UTR CAA 90 bp | GCAAGTGGTATGTGGCCTTCTGTAGGCTGTCCCAGGCAGCACCACCTTATCCTGATCAAAGGACCTTTCTaGCACCATCATATCTGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: ASGMWPSVGCPRQHHLILIKGPF*HHHIWC Trigger: ACACCAGATATGATGGTGCAAGAAAGGTCCTTTGAT...CAGGATAAGGTGGTGCTGCCTGGGACAGCCTACAGAAGGCCACATACCACTTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002883.7 ENSMUST00000221810.2 ENSMUST00000222464.2 |
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| CDS CCA 90 bp | GTCTATCCACTTCACATCTTCTGGAAGGTCAGTGACTATTGCCTCTaGAGAGATACAAACTCCACGGTCATAGACCGGCAGCTCATCGCA | + |
|
Preference number: 5 (lower is better) Translates to: VYPLHIFWKVSDYCL*RDTNSTVIDRQLIA Trigger: TGCGATGAGCTGCCGGTCTATGACCGTGGAGTTTGTATCTCTCCAGAGGCAATAGTCACTGACCTTCCAGAAGATGTGAAGTGGATAGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002883.7 ENSMUST00000222464.2 |
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| CDS-3UTR CAA 90 bp | GCTGCAAGAAGTGTCTATAAAGAGAACCACAGTGGGTCCTTAAGGCAAGTGGTAACAGACTTGCAGGGCTaGATGGGATCGTGCAGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: AARSVYKENHSGSLRQVVTDLQG*MGSCRN Trigger: GTTCCTGCACGATCCCATCAAGCCCTGCAAGTCTGT...TACCACTTGCCTTAAGGACCCACTGTGGTTCTCTTTATAGACACTTCTTGCAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002883.7 ENSMUST00000222464.2 |
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| CDS-3UTR CAA 90 bp | TTCCCTCTTGTACTTTCCATACCAGAAAACCAACAAGTAACAGGGCTCTGTGGCGTCGGCTTCACCTTTTaGCACTTGCACCGATCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: FPLVLSIPENQQVTGLCGVGFTF*HLHRSG Trigger: CCCTGATCGGTGCAAGTGCAAAAAGGTGAAGCCGAC...GCCACAGAGCCCTGTTACTTGTTGGTTTTCTGGTATGGAAAGTACAAGAGGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000002883.7 ENSMUST00000221810.2 ENSMUST00000222464.2 ENSMUST00000222992.2 |
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| CDS-3UTR CAA 90 bp | CAACAAGTAACAGGGCTCTGTGGCTTAAAGCAAAACACTGAAGCTATCATTACGTTAGGACTGGCAGGTTaGGGAGCAGGTGGCCTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: QQVTGLCGLKQNTEAIITLGLAG*GAGGLP Trigger: GGGAAGGCCACCTGCTCCCAAACCTGCCAGTCCTAA...CGTAATGATAGCTTCAGTGTTTTGCTTTAAGCCACAGAGCCCTGTTACTTGTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002883.7 ENSMUST00000222992.2 |
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| CDS GCA 90 bp | TGTGATGTCTATCCACTTCACATCTTCTGGAAGGTCAGTGACTATTaGCTCTGGAGAGATACAAACTCCACGGTCATAGACCGGCAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: CDVYPLHIFWKVSDY*LWRDTNSTVIDRQL Trigger: GAGCTGCCGGTCTATGACCGTGGAGTTTGTATCTCTCCAGAGGCAATAGTCACTGACCTTCCAGAAGATGTGAAGTGGATAGACATCACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002883.7 ENSMUST00000222464.2 |
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| CDS GCA 90 bp | TGTAGTTTTTGCTCAGGTATGTTGCCAGGGTCGGCTTCACCTTTTTaGACTTGCACCGATCAGGGCTCAGACGTTTACAGTCAGCATCAA | + |
|
Preference number: 5 (lower is better) Translates to: CSFCSGMLPGSASPF*TCTDQGSDVYSQHQ Trigger: TTGATGCTGACTGTAAACGTCTGAGCCCTGATCGGTGCAAGTGCAAAAAGGTGAAGCCGACCCTGGCAACATACCTGAGCAAAAACTACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000002883.7 ENSMUST00000221810.2 ENSMUST00000222464.2 ENSMUST00000222992.2 |
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| CDS-3UTR CAA 90 bp | AACCAACAAGTAACAGGGCTCTGTGGCTTAAAGCAAAACACTGAAGCTATCATTCGCTGGCACACAGACTaGCAGGGCTTGATGGGATCG | + |
|
Preference number: 5 (lower is better) Translates to: NQQVTGLCGLKQNTEAIIRWHTD*QGLMGS Trigger: CGATCCCATCAAGCCCTGCAAGTCTGTGTGCCAGCG...AATGATAGCTTCAGTGTTTTGCTTTAAGCCACAGAGCCCTGTTACTTGTTGGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002883.7 ENSMUST00000222464.2 |
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| CDS-3UTR CAA 90 bp | ACCCTTCCACAAGCCTTCCCTCTTGTACTTTCCATACCAGAAAACCAACAAGTAGTCGGCTTCACCTTTTaGCACTTGCACCGATCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: TLPQAFPLVLSIPENQQVVGFTF*HLHRSG Trigger: CCCTGATCGGTGCAAGTGCAAAAAGGTGAAGCCGAC...TACTTGTTGGTTTTCTGGTATGGAAAGTACAAGAGGGAAGGCTTGTGGAAGGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000002883.7 ENSMUST00000221810.2 ENSMUST00000222464.2 ENSMUST00000222992.2 |
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| CDS-3UTR CAA 90 bp | AGTGTCTATAAAGAGAACCACAGTGGGTCCTTAAGGCAAGTGGTATGTGGCCTTCACTGGCAGGAGGAATaGGTGATGAGAGGGACTTGT | + |
|
Preference number: 5 (lower is better) Translates to: SVYKENHSGSLRQVVCGLHWQEE*VMRGTC Trigger: ACAAGTCCCTCTCATCACCAATTCCTCCTGCCAGTG...AAGGCCACATACCACTTGCCTTAAGGACCCACTGTGGTTCTCTTTATAGACACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002883.7 ENSMUST00000221810.2 ENSMUST00000222464.2 ENSMUST00000222992.2 |
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| CDS-3UTR CAA 90 bp | GCTGCAAGAAGTGTCTATAAAGAGAACCACAGTGGGTCCTTAAGGCAAGTGGTACACTGGCAGGAGGAATaGGTGATGAGAGGGACTTGT | + |
|
Preference number: 5 (lower is better) Translates to: AARSVYKENHSGSLRQVVHWQEE*VMRGTC Trigger: ACAAGTCCCTCTCATCACCAATTCCTCCTGCCAGTG...TACCACTTGCCTTAAGGACCCACTGTGGTTCTCTTTATAGACACTTCTTGCAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002883.7 ENSMUST00000221810.2 ENSMUST00000222464.2 ENSMUST00000222992.2 |
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| CDS-3UTR CAA 90 bp | AACCAACAAGTAACAGGGCTCTGTGGCTTAAAGCAAAACACTGAAGCTATCATTTTAGGACTGGCAGGTTaGGGAGCAGGTGGCCTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: NQQVTGLCGLKQNTEAIILGLAG*GAGGLP Trigger: GGGAAGGCCACCTGCTCCCAAACCTGCCAGTCCTAA...AATGATAGCTTCAGTGTTTTGCTTTAAGCCACAGAGCCCTGTTACTTGTTGGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002883.7 ENSMUST00000222992.2 |
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| CDS GCA 90 bp | TGTGATGTCTATCCACTTCACATCTTCTGGAAGGTCAGTGACTATTaGCTCTGGAGAGATACAAACTCCACGGTCATAGACCGGCAGCNN | + |
|
Preference number: 5 (lower is better) Translates to: CDVYPLHIFWKVSDY*LWRDTNSTVIDRQX Trigger: NNGCTGCCGGTCTATGACCGTGGAGTTTGTATCTCTCCAGAGGCAATAGTCACTGACCTTCCAGAAGATGTGAAGTGGATAGACATCACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221810.2 |
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| CDS-3UTR CAA 90 bp | CAAGTAACAGGGCTCTGTGGCTTAAAGCAAAACACTGAAGCTATCATTACGAGAACAGACTTGCAGGGCTaGATGGGATCGTGCAGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: QVTGLCGLKQNTEAIITRTDLQG*MGSCRN Trigger: GTTCCTGCACGATCCCATCAAGCCCTGCAAGTCTGT...TCTCGTAATGATAGCTTCAGTGTTTTGCTTTAAGCCACAGAGCCCTGTTACTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002883.7 ENSMUST00000222464.2 |
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| CDS-3UTR CAA 90 bp | CCTTCCACAAGCCTTCCCTCTTGTACTTTCCATACCAGAAAACCAACAAGTAACTTCACCTTTTTGCACTaGCACCGATCAGGGCTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: PSTSLPSCTFHTRKPTSNFTFLH*HRSGLR Trigger: TCTGAGCCCTGATCGGTGCAAGTGCAAAAAGGTGAA...GTTACTTGTTGGTTTTCTGGTATGGAAAGTACAAGAGGGAAGGCTTGTGGAAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000002883.7 ENSMUST00000221810.2 ENSMUST00000222464.2 ENSMUST00000222992.2 |
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| CDS-3UTR CAA 90 bp | GTAAGGGTGGCTCCATCACAGAAAGTAATTAGCTTGCGCTTTTCTTCAGGTTTGTTCACCTTTTTGCACTaGCACCGATCAGGGCTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: VRVAPSQKVISLRFSSGLFTFLH*HRSGLR Trigger: TCTGAGCCCTGATCGGTGCAAGTGCAAAAAGGTGAA...CAAACCTGAAGAAAAGCGCAAGCTAATTACTTTCTGTGATGGAGCCACCCTTAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000221810.2 ENSMUST00000222464.2 |
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| CDS-3UTR CAA 90 bp | TCTTGTACTTTCCATACCAGAAAACCAACAAGTAACAGGGCTCTGTGGCTTAAAGTCGGCTTCACCTTTTaGCACTTGCACCGATCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: SCTFHTRKPTSNRALWLKVGFTF*HLHRSG Trigger: CCCTGATCGGTGCAAGTGCAAAAAGGTGAAGCCGAC...TTTAAGCCACAGAGCCCTGTTACTTGTTGGTTTTCTGGTATGGAAAGTACAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000002883.7 ENSMUST00000221810.2 ENSMUST00000222464.2 ENSMUST00000222992.2 |
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| CDS-3UTR CAA 90 bp | CAAGTAACAGGGCTCTGTGGCTTAAAGCAAAACACTGAAGCTATCATTACGAGAACAGTTGTGACCTCATaGCAACCACTCCTCTGGACG | + |
|
Preference number: 5 (lower is better) Translates to: QVTGLCGLKQNTEAIITRTVVTS*QPLLWT Trigger: CGTCCAGAGGAGTGGTTGCAATGAGGTCACAACTGT...TCTCGTAATGATAGCTTCAGTGTTTTGCTTTAAGCCACAGAGCCCTGTTACTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000002883.7 ENSMUST00000221810.2 ENSMUST00000222464.2 ENSMUST00000222992.2 |
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| CDS-3UTR CAA 90 bp | CTTTCCATACCAGAAAACCAACAAGTAACAGGGCTCTGTGGCTTAAAGCAAAACACAGTTGTGACCTCATaGCAACCACTCCTCTGGACG | + |
|
Preference number: 5 (lower is better) Translates to: LSIPENQQVTGLCGLKQNTVVTS*QPLLWT Trigger: CGTCCAGAGGAGTGGTTGCAATGAGGTCACAACTGT...GTTTTGCTTTAAGCCACAGAGCCCTGTTACTTGTTGGTTTTCTGGTATGGAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000002883.7 ENSMUST00000221810.2 ENSMUST00000222464.2 ENSMUST00000222992.2 |
||
| CDS TCA 90 bp | GCAGGAGGAATTGGTGATGAGAGGGACTTGTGTTCGAGGGATAGGTaGCAAAGACTTGAAGATCTCTTTTACATCTACCACAGTTGTGAC | + |
|
Preference number: 5 (lower is better) Translates to: AGGIGDERDLCSRDR*QRLEDLFYIYHSCD Trigger: GTCACAACTGTGGTAGATGTAAAAGAGATCTTCAAGTCTTTGTCACCTATCCCTCGAACACAAGTCCCTCTCATCACCAATTCCTCCTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000002883.7 ENSMUST00000221810.2 ENSMUST00000222464.2 ENSMUST00000222992.2 |
||
| CDS GCA 90 bp | CGATCAGGGCTCAGACGTTTACAGTCAGCATCAAAGGACCTTTCTTaGACCATCATATCTGGTGTGATGTCTATCCACTTCACATCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: RSGLRRLQSASKDLS*TIISGVMSIHFTSS Trigger: AGAAGATGTGAAGTGGATAGACATCACACCAGATATGATGGTGCAAGAAAGGTCCTTTGATGCTGACTGTAAACGTCTGAGCCCTGATCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002883.7 ENSMUST00000221810.2 ENSMUST00000222464.2 |
||
| CDS CCA 90 bp | TTGCACCATCATATCTGGTGTGATGTCTATCCACTTCACATCTTCTaGAAGGTCAGTGACTATTGCCTCTGGAGAGATACAAACTCCACG | + |
|
Preference number: 5 (lower is better) Translates to: LHHHIWCDVYPLHIF*KVSDYCLWRDTNST Trigger: CGTGGAGTTTGTATCTCTCCAGAGGCAATAGTCACTGACCTTCCAGAAGATGTGAAGTGGATAGACATCACACCAGATATGATGGTGCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002883.7 ENSMUST00000221810.2 ENSMUST00000222464.2 |
||
| CDS-3UTR CAA 90 bp | TCTTGTACTTTCCATACCAGAAAACCAACAAGTAACAGGGCTCTGTGGCTTAAAACAGTTGTGACCTCATaGCAACCACTCCTCTGGACG | + |
|
Preference number: 5 (lower is better) Translates to: SCTFHTRKPTSNRALWLKTVVTS*QPLLWT Trigger: CGTCCAGAGGAGTGGTTGCAATGAGGTCACAACTGT...TTTAAGCCACAGAGCCCTGTTACTTGTTGGTTTTCTGGTATGGAAAGTACAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000002883.7 ENSMUST00000221810.2 ENSMUST00000222464.2 ENSMUST00000222992.2 |
||
| CDS-3UTR CAA 90 bp | TCTTGTACTTTCCATACCAGAAAACCAACAAGTAACAGGGCTCTGTGGCTTAAACACTGGCAGGAGGAATaGGTGATGAGAGGGACTTGT | + |
|
Preference number: 5 (lower is better) Translates to: SCTFHTRKPTSNRALWLKHWQEE*VMRGTC Trigger: ACAAGTCCCTCTCATCACCAATTCCTCCTGCCAGTG...TTTAAGCCACAGAGCCCTGTTACTTGTTGGTTTTCTGGTATGGAAAGTACAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000002883.7 ENSMUST00000221810.2 ENSMUST00000222464.2 ENSMUST00000222992.2 |
||
| CDS-3UTR CAA 90 bp | CCTTCCACAAGCCTTCCCTCTTGTACTTTCCATACCAGAAAACCAACAAGTAACGGGGCACTTCTAGCTTaGATGTTCTTCTTAGGACTG | + |
|
Preference number: 5 (lower is better) Translates to: PSTSLPSCTFHTRKPTSNGALLA*MFFLGL Trigger: CAGTCCTAAGAAGAACATCAAAGCTAGAAGTGCCCC...GTTACTTGTTGGTTTTCTGGTATGGAAAGTACAAGAGGGAAGGCTTGTGGAAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002883.7 ENSMUST00000222992.2 |
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| CDS-3UTR CAA 90 bp | AGTGTCTATAAAGAGAACCACAGTGGGTCCTTAAGGCAAGTGGTATGTGGCCTTTTCAGGTTTGACTTTTaGGGGGCACTTCTAGCTTTG | + |
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Preference number: 5 (lower is better) Translates to: SVYKENHSGSLRQVVCGLFRFDF*GALLAL Trigger: CAAAGCTAGAAGTGCCCCCAAAAAGTCAAACCTGAA...AAGGCCACATACCACTTGCCTTAAGGACCCACTGTGGTTCTCTTTATAGACACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000002883.7 ENSMUST00000222992.2 |
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| CDS GCA 90 bp | CAGTTTCTGATAACAATTCCAAGTAACTTGGGTGTGATTCTTAACTaGAGATTCAAACAGCACATGCTCTCCATGGCGCCTGTGAGAGCT | + |
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Preference number: 5 (lower is better) Translates to: QFLITIPSNLGVILN*RFKQHMLSMAPVRA Trigger: AGCTCTCACAGGCGCCATGGAGAGCATGTGCTGTTTGAATCTGCAGTTAAGAATCACACCCAAGTTACTTGGAATTGTTATCAGAAACTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222464.2 |
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| CDS-3UTR CAA 90 bp | CAACAAGTAACAGGGCTCTGTGGCTTAAAGCAAAACACTGAAGCTATCATTACGTTCAGGTTTGACTTTTaGGGGGCACTTCTAGCTTTG | + |
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Preference number: 5 (lower is better) Translates to: QQVTGLCGLKQNTEAIITFRFDF*GALLAL Trigger: CAAAGCTAGAAGTGCCCCCAAAAAGTCAAACCTGAA...CGTAATGATAGCTTCAGTGTTTTGCTTTAAGCCACAGAGCCCTGTTACTTGTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000002883.7 ENSMUST00000222992.2 |
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| CDS-3UTR CAA 90 bp | TGCAATTCTGCTAGAATATTGTATCTCACAACTGTAGCCTCCCTCAGCCTTGAAACAATTCCAAGTAACTaGGGTGTGATTCTTAACTGC | + |
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Preference number: 5 (lower is better) Translates to: CNSARILYLTTVASLSLETIPSN*GVILNC Trigger: GCAGTTAAGAATCACACCCAAGTTACTTGGAATTGT...TTCAAGGCTGAGGGAGGCTACAGTTGTGAGATACAATATTCTAGCAGAATTGCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222464.2 |
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| CDS TCA 90 bp | CCCACCATGTTGCTGATTATACTTACTATGGACCTTCTACTGAGTTaGTCTCTCCACTTTTCAACTAAGCAATTTTCAAGAAGCATCATC | + |
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Preference number: 5 (lower is better) Translates to: PTMLLIILTMDLLLS*SLHFSTKQFSRSII Trigger: GATGATGCTTCTTGAAAATTGCTTAGTTGAAAAGTGGAGAGATCAACTCAGTAGAAGGTCCATAGTAAGTATAATCAGCAACATGGTGGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000221810.2 ENSMUST00000222464.2 |
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| CDS TCA 72 bp | CCAGGCTCTCTGGCCAGCTGTGGTTATACATCTTCATaGGGGGCTCGCAGTCGTCACGTGCGCGCTGGCACA | + |
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Preference number: 6 (lower is better) Translates to: PGSLASCGYTSS*GARSRHVRAGT Trigger: TGTGCCAGCGCGCACGTGACGACTGCGAGCCCCTCATGAAGATGTATAACCACAGCTGGCCAGAGAGCCTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000002883.7 ENSMUST00000222464.2 |
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| CDS CAA 90 bp | CTGCAGATTCAAACAGCACATGCTCTCCATGGCGCCTGTGAGAGCTaGGAGAGAAGGCAGCGTGGAGAAGCCCCATCTGTGGGATTTCTT | + |
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Preference number: 6 (lower is better) Translates to: LQIQTAHALHGACES*ERRQRGEAPSVGFL Trigger: AAGAAATCCCACAGATGGGGCTTCTCCACGCTGCCTTCTCTCCAAGCTCTCACAGGCGCCATGGAGAGCATGTGCTGTTTGAATCTGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222464.2 |
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| CDS GCA 72 bp | GGTATGTTGCCAGGGTCGGCTTCACCTTTTTGCACTTaGACCGATCAGGGCTCAGACGTTTACAGTCAGCAT | + |
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Preference number: 6 (lower is better) Translates to: GMLPGSASPFCT*TDQGSDVYSQH Trigger: ATGCTGACTGTAAACGTCTGAGCCCTGATCGGTGCAAGTGCAAAAAGGTGAAGCCGACCCTGGCAACATACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000002883.7 ENSMUST00000221810.2 ENSMUST00000222464.2 ENSMUST00000222992.2 |
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| CDS GCA 72 bp | TGCTCAGGTATGTTGCCAGGGTCGGCTTCACCTTTTTaGACTTGCACCGATCAGGGCTCAGACGTTTACAGT | + |
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Preference number: 6 (lower is better) Translates to: CSGMLPGSASPF*TCTDQGSDVYS Trigger: ACTGTAAACGTCTGAGCCCTGATCGGTGCAAGTGCAAAAAGGTGAAGCCGACCCTGGCAACATACCTGAGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000002883.7 ENSMUST00000221810.2 ENSMUST00000222464.2 ENSMUST00000222992.2 |
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| CDS CAA 72 bp | AGGTATGTTGCCAGGGTCGGCTTCACCTTTTTGCACTaGCACCGATCAGGGCTCAGACGTTTACAGTCAGCA | + |
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Preference number: 6 (lower is better) Translates to: RYVARVGFTFLH*HRSGLRRLQSA Trigger: TGCTGACTGTAAACGTCTGAGCCCTGATCGGTGCAAGTGCAAAAAGGTGAAGCCGACCCTGGCAACATACCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000002883.7 ENSMUST00000221810.2 ENSMUST00000222464.2 ENSMUST00000222992.2 |
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| CDS CAA 72 bp | TTGCTCAGGTATGTTGCCAGGGTCGGCTTCACCTTTTaGCACTTGCACCGATCAGGGCTCAGACGTTTACAG | + |
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Preference number: 6 (lower is better) Translates to: LLRYVARVGFTF*HLHRSGLRRLQ Trigger: CTGTAAACGTCTGAGCCCTGATCGGTGCAAGTGCAAAAAGGTGAAGCCGACCCTGGCAACATACCTGAGCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000002883.7 ENSMUST00000221810.2 ENSMUST00000222464.2 ENSMUST00000222992.2 |
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| CDS CAA 90 bp | TTTTTGCTCAGGTATGTTGCCAGGGTCGGCTTCACCTTTTTGCACTaGCACCGATCAGGGCTCAGACGTTTACAGTCAGCATCAAAGGAC | + |
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Preference number: 6 (lower is better) Translates to: FLLRYVARVGFTFLH*HRSGLRRLQSASKD Trigger: GTCCTTTGATGCTGACTGTAAACGTCTGAGCCCTGATCGGTGCAAGTGCAAAAAGGTGAAGCCGACCCTGGCAACATACCTGAGCAAAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000002883.7 ENSMUST00000221810.2 ENSMUST00000222464.2 ENSMUST00000222992.2 |
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| CDS CCA 72 bp | CTTCACATCTTCTGGAAGGTCAGTGACTATTGCCTCTaGAGAGATACAAACTCCACGGTCATAGACCGGCAG | + |
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Preference number: 6 (lower is better) Translates to: LHIFWKVSDYCL*RDTNSTVIDRQ Trigger: CTGCCGGTCTATGACCGTGGAGTTTGTATCTCTCCAGAGGCAATAGTCACTGACCTTCCAGAAGATGTGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002883.7 ENSMUST00000221810.2 ENSMUST00000222464.2 |
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| CDS CAA 90 bp | CCGATCAGGGCTCAGACGTTTACAGTCAGCATCAAAGGACCTTTCTaGCACCATCATATCTGGTGTGATGTCTATCCACTTCACATCTTC | + |
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Preference number: 6 (lower is better) Translates to: PIRAQTFTVSIKGPF*HHHIWCDVYPLHIF Trigger: GAAGATGTGAAGTGGATAGACATCACACCAGATATGATGGTGCAAGAAAGGTCCTTTGATGCTGACTGTAAACGTCTGAGCCCTGATCGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002883.7 ENSMUST00000221810.2 ENSMUST00000222464.2 |
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| CDS CCA 72 bp | GTGGAGAAGCCCCATCTGTGGGATTTCTTACCTTCATaGCTACAGGTTCCCACCATGTTGCTGATTATACTT | + |
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Preference number: 6 (lower is better) Translates to: VEKPHLWDFLPS*LQVPTMLLIIL Trigger: AAGTATAATCAGCAACATGGTGGGAACCTGTAGCCATGAAGGTAAGAAATCCCACAGATGGGGCTTCTCCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222464.2 |
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| CDS TCA 72 bp | CAAGAAGCATCATCCTTGAACGCCACTCATAACACATaGTTAGGACATCTTGATGGGGCAGGATATGTGGAC | + |
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Preference number: 6 (lower is better) Translates to: QEASSLNATHNT*LGHLDGAGYVD Trigger: GTCCACATATCCTGCCCCATCAAGATGTCCTAATCATGTGTTATGAGTGGCGTTCAAGGATGATGCTTCTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000002883.7 ENSMUST00000221810.2 ENSMUST00000222464.2 ENSMUST00000222992.2 |
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| CDS GCA 72 bp | ATGAATAACATAGCTGTAGTTTTTGCTCAGGTATGTTaGCAGGGTCGGCTTCACCTTTTTGCACTTGCACCG | + |
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Preference number: 6 (lower is better) Translates to: MNNIAVVFAQVC*QGRLHLFALAP Trigger: CGGTGCAAGTGCAAAAAGGTGAAGCCGACCCTGGCAACATACCTGAGCAAAAACTACAGCTATGTTATTCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000002883.7 ENSMUST00000221810.2 ENSMUST00000222464.2 ENSMUST00000222992.2 |
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| CDS GCA 72 bp | CTCAGACGTTTACAGTCAGCATCAAAGGACCTTTCTTaGACCATCATATCTGGTGTGATGTCTATCCACTTC | + |
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Preference number: 6 (lower is better) Translates to: LRRLQSASKDLS*TIISGVMSIHF Trigger: GAAGTGGATAGACATCACACCAGATATGATGGTGCAAGAAAGGTCCTTTGATGCTGACTGTAAACGTCTGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002883.7 ENSMUST00000221810.2 ENSMUST00000222464.2 |
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| CDS CCA 72 bp | CATATCTGGTGTGATGTCTATCCACTTCACATCTTCTaGAAGGTCAGTGACTATTGCCTCTGGAGAGATACA | + |
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Preference number: 6 (lower is better) Translates to: HIWCDVYPLHIF*KVSDYCLWRDT Trigger: TGTATCTCTCCAGAGGCAATAGTCACTGACCTTCCAGAAGATGTGAAGTGGATAGACATCACACCAGATATG 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002883.7 ENSMUST00000221810.2 ENSMUST00000222464.2 |
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| CDS CAA 72 bp | GCTCAGACGTTTACAGTCAGCATCAAAGGACCTTTCTaGCACCATCATATCTGGTGTGATGTCTATCCACTT | + |
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Preference number: 6 (lower is better) Translates to: AQTFTVSIKGPF*HHHIWCDVYPL Trigger: AAGTGGATAGACATCACACCAGATATGATGGTGCAAGAAAGGTCCTTTGATGCTGACTGTAAACGTCTGAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002883.7 ENSMUST00000221810.2 ENSMUST00000222464.2 |
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| CDS CAA 72 bp | AGAGGGACTTGTGTTCGAGGGATAGGTGACAAAGACTaGAAGATCTCTTTTACATCTACCACAGTTGTGACC | + |
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Preference number: 6 (lower is better) Translates to: RGTCVRGIGDKD*KISFTSTTVVT Trigger: GGTCACAACTGTGGTAGATGTAAAAGAGATCTTCAAGTCTTTGTCACCTATCCCTCGAACACAAGTCCCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000002883.7 ENSMUST00000221810.2 ENSMUST00000222464.2 ENSMUST00000222992.2 |
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| CDS CAA 90 bp | TTGGTGATGAGAGGGACTTGTGTTCGAGGGATAGGTGACAAAGACTaGAAGATCTCTTTTACATCTACCACAGTTGTGACCTCATTGCAA | + |
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Preference number: 6 (lower is better) Translates to: LVMRGTCVRGIGDKD*KISFTSTTVVTSLQ Trigger: TTGCAATGAGGTCACAACTGTGGTAGATGTAAAAGAGATCTTCAAGTCTTTGTCACCTATCCCTCGAACACAAGTCCCTCTCATCACCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000002883.7 ENSMUST00000221810.2 ENSMUST00000222464.2 ENSMUST00000222992.2 |
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| CDS TCA 72 bp | ATTGGTGATGAGAGGGACTTGTGTTCGAGGGATAGGTaGCAAAGACTTGAAGATCTCTTTTACATCTACCAC | + |
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Preference number: 6 (lower is better) Translates to: IGDERDLCSRDR*QRLEDLFYIYH Trigger: GTGGTAGATGTAAAAGAGATCTTCAAGTCTTTGTCACCTATCCCTCGAACACAAGTCCCTCTCATCACCAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000002883.7 ENSMUST00000221810.2 ENSMUST00000222464.2 ENSMUST00000222992.2 |
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| CDS TCA 72 bp | CCTGAAGCCTCTCTTCCCACTGTATGGACCTTCTACTaGGTTGATCTCTCCACTTTTCAACTAAGCAATTTT | + |
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Preference number: 6 (lower is better) Translates to: PEASLPTVWTFY*VDLSTFQLSNF Trigger: AAAATTGCTTAGTTGAAAAGTGGAGAGATCAACTCAGTAGAAGGTCCATACAGTGGGAAGAGAGGCTTCAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002883.7 ENSMUST00000222992.2 |
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| CDS GCA 72 bp | ATAACAATTCCAAGTAACTTGGGTGTGATTCTTAACTaGAGATTCAAACAGCACATGCTCTCCATGGCGCCT | + |
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Preference number: 6 (lower is better) Translates to: ITIPSNLGVILN*RFKQHMLSMAP Trigger: AGGCGCCATGGAGAGCATGTGCTGTTTGAATCTGCAGTTAAGAATCACACCCAAGTTACTTGGAATTGTTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222464.2 |
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| CDS TCA 72 bp | AGCCTCTCTTCCCACTGTATGGACCTTCTACTGAGTTaGTCTCTCCACTTTTCAACTAAGCAATTTTCAAGA | + |
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Preference number: 6 (lower is better) Translates to: SLSSHCMDLLLS*SLHFSTKQFSR Trigger: TCTTGAAAATTGCTTAGTTGAAAAGTGGAGAGATCAACTCAGTAGAAGGTCCATACAGTGGGAAGAGAGGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002883.7 ENSMUST00000222992.2 |
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| CDS CAA 90 bp | AACTGTGAAGTTGAACAACAGTTTCTGATAACAATTCCAAGTAACTaGGGTGTGATTCTTAACTGCAGATTCAAACAGCACATGCTCTCC | + |
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Preference number: 6 (lower is better) Translates to: NCEVEQQFLITIPSN*GVILNCRFKQHMLS Trigger: GGAGAGCATGTGCTGTTTGAATCTGCAGTTAAGAATCACACCCAAGTTACTTGGAATTGTTATCAGAAACTGTTGTTCAACTTCACAGTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222464.2 |
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| CDS CAA 72 bp | GTTGAACAACAGTTTCTGATAACAATTCCAAGTAACTaGGGTGTGATTCTTAACTGCAGATTCAAACAGCAC | + |
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Preference number: 6 (lower is better) Translates to: VEQQFLITIPSN*GVILNCRFKQH Trigger: GTGCTGTTTGAATCTGCAGTTAAGAATCACACCCAAGTTACTTGGAATTGTTATCAGAAACTGTTGTTCAAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222464.2 |
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| CDS TCA 72 bp | TTGCTGATTATACTTACTATGGACCTTCTACTGAGTTaGTCTCTCCACTTTTCAACTAAGCAATTTTCAAGA | + |
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Preference number: 6 (lower is better) Translates to: LLIILTMDLLLS*SLHFSTKQFSR Trigger: TCTTGAAAATTGCTTAGTTGAAAAGTGGAGAGATCAACTCAGTAGAAGGTCCATAGTAAGTATAATCAGCAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000221810.2 ENSMUST00000222464.2 |
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