Pregenerated sensors for SFRP2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027996Ensembl transcript IDs: ENSMUST00000029625.8
Found 79 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCGGACTGTGCTTGGGAAACCGGAAATGAGGTCGCGGAGCGGAAGTaGTCTACAGAGCTCAGGGCCTGGATGGAGAGAAGCCACCCCACT | + |
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Preference number: 1 (lower is better) Translates to: PDCAWETGNEVAERK*STELRAWMERSHPT Trigger: AGTGGGGTGGCTTCTCTCCATCCAGGCCCTGAGCTCTGTAGACCACTTCCGCTCCGCGACCTCATTTCCGGTTTCCCAAGCACAGTCCGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029625.8 |
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| 3UTR-3UTR CCA 90 bp | CACATGCAGGAGGCAGGGCAAGCGGCTCCAAGCTGGGGCTGTAGCTTTCCCGGAGTCGCGGAGCGGAAGTaGTCTACAGAGCTCAGGGCC | + |
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Preference number: 2 (lower is better) Translates to: HMQEAGQAAPSWGCSFPGVAERK*STELRA Trigger: GGCCCTGAGCTCTGTAGACCACTTCCGCTCCGCGAC...TCCGGGAAAGCTACAGCCCCAGCTTGGAGCCGCTTGCCCTGCCTCCTGCATGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029625.8 |
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| 3UTR-3UTR CCA 90 bp | CACATGCAGGAGGCAGGGCAAGCGGCTCCAAGCTGGGGCTGTAGCTTTCCCGGAAGCTCAGGGCCTGGATaGAGAGAAGCCACCCCACTG | + |
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Preference number: 2 (lower is better) Translates to: HMQEAGQAAPSWGCSFPGSSGPG*REATPL Trigger: CAGTGGGGTGGCTTCTCTCCATCCAGGCCCTGAGCT...TCCGGGAAAGCTACAGCCCCAGCTTGGAGCCGCTTGCCCTGCCTCCTGCATGTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029625.8 |
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| 3UTR-3UTR GCA 90 bp | CAACAGACTGACCAAAGAGAGAAAATGCCCCTCGGGTCAAAGTACTACAGCTATTTAGGGATACACACATaGAGGAGGCAGGGCAAGCGG | + |
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Preference number: 2 (lower is better) Translates to: QQTDQREKMPLGSKYYSYLGIHT*RRQGKR Trigger: CCGCTTGCCCTGCCTCCTGCATGTGTGTATCCCTAA...ATAGCTGTAGTACTTTGACCCGAGGGGCATTTTCTCTCTTTGGTCAGTCTGTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029625.8 |
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| 3UTR-3UTR CCA 90 bp | TTTGTACAAGATCTGGATGGGCTTTTCGCTTTCCGTGAAAACAGCTATGGGTTTACAGAGCTCAGGGCCTaGATGGAGAGAAGCCACCCC | + |
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Preference number: 2 (lower is better) Translates to: FVQDLDGLFAFRENSYGFTELRA*MERSHP Trigger: GGGGTGGCTTCTCTCCATCCAGGCCCTGAGCTCTGT...AAACCCATAGCTGTTTTCACGGAAAGCGAAAAGCCCATCCAGATCTTGTACAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029625.8 |
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| 3UTR-3UTR CCA 90 bp | CCAGCTTTATCTCAACTAAGTCTGGGACCCACAAGCTTAGACCACAGAGGGAAATTCCCGGACTGTGCTTaGGAAACCGGAAATGAGGTC | + |
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Preference number: 2 (lower is better) Translates to: PALSQLSLGPTSLDHRGKFPDCA*ETGNEV Trigger: GACCTCATTTCCGGTTTCCCAAGCACAGTCCGGGAA...TTTCCCTCTGTGGTCTAAGCTTGTGGGTCCCAGACTTAGTTGAGATAAAGCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029625.8 |
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| 3UTR-3UTR TCA 90 bp | TTTCCAGGTCAACTACTACGTATATTACAGGTAAGCTACAATGATTTAGTTTGCTATAAGCCAACAGACTaGCCAAAGAGAGAAAATGCC | + |
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Preference number: 2 (lower is better) Translates to: FPGQLLRILQVSYNDLVCYKPTD*PKRENA Trigger: GGCATTTTCTCTCTTTGGTCAGTCTGTTGGCTTATA...GCAAACTAAATCATTGTAGCTTACCTGTAATATACGTAGTAGTTGACCTGGAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029625.8 |
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| 3UTR TCA 72 bp | CATGGCAACCTAAGTGCACGGTATAAGCCAACAGACTaGCCAAAGAGAGAAAATGCCCCTCGGGTCAAAGTA | + |
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Preference number: 3 (lower is better) Translates to: HGNLSARYKPTD*PKRENAPRVKV Trigger: TACTTTGACCCGAGGGGCATTTTCTCTCTTTGGTCAGTCTGTTGGCTTATACCGTGCACTTAGGTTGCCATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029625.8 |
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| 3UTR-3UTR CAA 90 bp | TTTCCAGGTCAACTACTACGTATATTACAGGTAAGCTACAATGATTTAGTTTGCGTATTCACTTTTTATTaGAGGGCATCATGCAATGAG | + |
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Preference number: 3 (lower is better) Translates to: FPGQLLRILQVSYNDLVCVFTFY*RASCNE Trigger: CTCATTGCATGATGCCCTCAAATAAAAAGTGAATAC...GCAAACTAAATCATTGTAGCTTACCTGTAATATACGTAGTAGTTGACCTGGAAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029625.8 |
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| CDS-3UTR TCA 90 bp | GGAAATGAGGTCGCGGAGCGGAAGTGGTCTACAGAGCTCAGGGCCTGGATGGAGAGCCGAAGGCGGACATaGCCGGGGCGCAGCGGTCCT | + |
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Preference number: 4 (lower is better) Translates to: GNEVAERKWSTELRAWMESRRRT*PGRSGP Trigger: AGGACCGCTGCGCCCCGGTCATGTCCGCCTTCGGCT...CTCCATCCAGGCCCTGAGCTCTGTAGACCACTTCCGCTCCGCGACCTCATTTCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029625.8 |
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| CDS-3UTR TCA 90 bp | CACATGCAGGAGGCAGGGCAAGCGGCTCCAAGCTGGGGCTGTAGCTTTCCCGGATGCACGCAGAGCGAGTaGCACGGCTGGATGGTCTCA | + |
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Preference number: 4 (lower is better) Translates to: HMQEAGQAAPSWGCSFPGCTQSE*HGWMVS Trigger: TGAGACCATCCAGCCGTGTCACTCGCTCTGCGTGCA...TCCGGGAAAGCTACAGCCCCAGCTTGGAGCCGCTTGCCCTGCCTCCTGCATGTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029625.8 |
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| CDS-3UTR GCA 90 bp | TGCAGGAGGCAGGGCAAGCGGCTCCAAGCTGGGGCTGTAGCTTTCCCGGACTGTTGGCGGGGATGGGCTTaGAGTTGCTGCGCTTGTAGG | + |
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Preference number: 4 (lower is better) Translates to: CRRQGKRLQAGAVAFPDCWRGWA*SCCACR Trigger: CCTACAAGCGCAGCAACTGCAAGCCCATCCCCGCCA...ACAGTCCGGGAAAGCTACAGCCCCAGCTTGGAGCCGCTTGCCCTGCCTCCTGCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029625.8 |
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| CDS-3UTR GCA 90 bp | GGTCGCGGAGCGGAAGTGGTCTACAGAGCTCAGGGCCTGGATGGAGAGAAGCCAATCCAGGCGCCCGCCTaGTCCAGCACCTCCTTCATG | + |
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Preference number: 4 (lower is better) Translates to: GRGAEVVYRAQGLDGEKPIQAPA*SSTSFM Trigger: CATGAAGGAGGTGCTGGAGCAGGCGGGCGCCTGGAT...TGGCTTCTCTCCATCCAGGCCCTGAGCTCTGTAGACCACTTCCGCTCCGCGACC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029625.8 |
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| CDS-3UTR CCA 90 bp | GGTCGCGGAGCGGAAGTGGTCTACAGAGCTCAGGGCCTGGATGGAGAGAAGCCAGGCACAGCTGCAGGTTaGCGGGGATGGGCTTGCAGT | + |
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Preference number: 4 (lower is better) Translates to: GRGAEVVYRAQGLDGEKPGTAAG*RGWACS Trigger: ACTGCAAGCCCATCCCCGCCAACCTGCAGCTGTGCC...TGGCTTCTCTCCATCCAGGCCCTGAGCTCTGTAGACCACTTCCGCTCCGCGACC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029625.8 |
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| CDS-3UTR CCA 90 bp | TGCAGGAGGCAGGGCAAGCGGCTCCAAGCTGGGGCTGTAGCTTTCCCGGACTGTCCAGCACCTCCTTCATaGTCTCGTGGCCCAGCAGGT | + |
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Preference number: 4 (lower is better) Translates to: CRRQGKRLQAGAVAFPDCPAPPS*SRGPAG Trigger: ACCTGCTGGGCCACGAGACCATGAAGGAGGTGCTGG...ACAGTCCGGGAAAGCTACAGCCCCAGCTTGGAGCCGCTTGCCCTGCCTCCTGCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029625.8 |
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| CDS-3UTR GCA 90 bp | TGCAGGAGGCAGGGCAAGCGGCTCCAAGCTGGGGCTGTAGCTTTCCCGGACTGTTCTCTCTGGCCCTTCTaGCACCGTTTCACGGAGGTG | + |
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Preference number: 4 (lower is better) Translates to: CRRQGKRLQAGAVAFPDCSLWPF*HRFTEV Trigger: CACCTCCGTGAAACGGTGGCAGAAGGGCCAGAGAGA...ACAGTCCGGGAAAGCTACAGCCCCAGCTTGGAGCCGCTTGCCCTGCCTCCTGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029625.8 |
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| CDS-3UTR CCA 90 bp | GGTCGCGGAGCGGAAGTGGTCTACAGAGCTCAGGGCCTGGATGGAGAGAAGCCAGGCAGCCGCATGTTCTaGTACTCGATGCCGTGGCAC | + |
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Preference number: 4 (lower is better) Translates to: GRGAEVVYRAQGLDGEKPGSRMF*YSMPWH Trigger: GTGCCACGGCATCGAGTACCAGAACATGCGGCTGCC...TGGCTTCTCTCCATCCAGGCCCTGAGCTCTGTAGACCACTTCCGCTCCGCGACC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029625.8 |
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| CDS-3UTR CCA 90 bp | CACATGCAGGAGGCAGGGCAAGCGGCTCCAAGCTGGGGCTGTAGCTTTCCCGGAAGCACAGGAACTTCTTaGTGTCCGGGTGGCACTGCT | + |
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Preference number: 4 (lower is better) Translates to: HMQEAGQAAPSWGCSFPGSTGTS*CPGGTA Trigger: AGCAGTGCCACCCGGACACCAAGAAGTTCCTGTGCT...TCCGGGAAAGCTACAGCCCCAGCTTGGAGCCGCTTGCCCTGCCTCCTGCATGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029625.8 |
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| CDS-3UTR GCA 90 bp | GGTCGCGGAGCGGAAGTGGTCTACAGAGCTCAGGGCCTGGATGGAGAGAAGCCATGGGCTTGCAGTTGCTaGGCTTGTAGGAGAAGTCGG | + |
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Preference number: 4 (lower is better) Translates to: GRGAEVVYRAQGLDGEKPWACSC*ACRRSR Trigger: CCGACTTCTCCTACAAGCGCAGCAACTGCAAGCCCA...TGGCTTCTCTCCATCCAGGCCCTGAGCTCTGTAGACCACTTCCGCTCCGCGACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029625.8 |
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| CDS-3UTR GCA 90 bp | GTGCACGGTATAAGCCAACAGACTGACCAAAGAGAGAAAATGCCCCTCGGGTCAGTGTCCGGGTGGCACTaGTTCATGACCAGCGGAATC | + |
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Preference number: 4 (lower is better) Translates to: VHGISQQTDQREKMPLGSVSGWH*FMTSGI Trigger: GATTCCGCTGGTCATGAAGCAGTGCCACCCGGACAC...TGACCCGAGGGGCATTTTCTCTCTTTGGTCAGTCTGTTGGCTTATACCGTGCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029625.8 |
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| CDS-3UTR CCA 90 bp | TATAAACTGAAGTTCTGTAGCTGGGATGGGAACGCATGCAATGGTCAGAGCTCATGGGAGCTTCCTCTGTaGCCGGCAGGAGGTGGTCGC | + |
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Preference number: 4 (lower is better) Translates to: YKLKFCSWDGNACNGQSSWELPL*PAGGGR Trigger: GCGACCACCTCCTGCCGGCCACAGAGGAAGCTCCCA...TGAGCTCTGACCATTGCATGCGTTCCCATCCCAGCTACAGAACTTCAGTTTATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029625.8 |
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| CDS-3UTR GCA 90 bp | CCAGCTTTATCTCAACTAAGTCTGGGACCCACAAGCTTAGACCACAGAGGGAAAACCAGCTCGCCGCCCTaGTTCTGTCCCATGACCAGA | + |
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Preference number: 4 (lower is better) Translates to: PALSQLSLGPTSLDHRGKTSSPP*FCPMTR Trigger: TCTGGTCATGGGACAGAAGCAGGGCGGCGAGCTGGT...TTTCCCTCTGTGGTCTAAGCTTGTGGGTCCCAGACTTAGTTGAGATAAAGCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029625.8 |
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| CDS-3UTR TCA 90 bp | GAAATGAGGTCGCGGAGCGGAAGTGGTCTACAGAGCTCAGGGCCTGGATGGAGATCTTGGTGTCTCTGTTaGTGTACGTTATCTCCTTCA | + |
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Preference number: 4 (lower is better) Translates to: EMRSRSGSGLQSSGPGWRSWCLC*CTLSPS Trigger: TGAAGGAGATAACGTACATCAACAGAGACACCAAGA...TCTCCATCCAGGCCCTGAGCTCTGTAGACCACTTCCGCTCCGCGACCTCATTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029625.8 |
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| CDS-3UTR GCA 90 bp | GAAATGTTTGAAGACTTAGATGCCGATTCTCAGGCTGGAACTGAGGAAGACTTTGAGCCCAGGCAGCAGTaGGAGGCGAGGACTAGCAGC | + |
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Preference number: 4 (lower is better) Translates to: EMFEDLDADSQAGTEEDFEPRQQ*EARTSS Trigger: GCTGCTAGTCCTCGCCTCGCACTGCTGCCTGGGCTC...AAAGTCTTCCTCAGTTCCAGCCTGAGAATCGGCATCTAAGTCTTCAAACATTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029625.8 |
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| CDS-3UTR GCA 90 bp | TATAAACTGAAGTTCTGTAGCTGGGATGGGAACGCATGCAATGGTCAGAGCTCACAGAGGTCGTTGTCCTaGGGGAAACGGTCGCACTCC | + |
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Preference number: 4 (lower is better) Translates to: YKLKFCSWDGNACNGQSSQRSLS*GKRSHS Trigger: GGAGTGCGACCGTTTCCCGCAGGACAACGACCTCTG...TGAGCTCTGACCATTGCATGCGTTCCCATCCCAGCTACAGAACTTCAGTTTATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029625.8 |
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| CDS-3UTR TCA 90 bp | CAACAGACTGACCAAAGAGAGAAAATGCCCCTCGGGTCAAAGTACTACAGCTATTGCGGGAGATGCGCTTaGACTCTCTCTGGCCCTTCT | + |
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Preference number: 4 (lower is better) Translates to: QQTDQREKMPLGSKYYSYCGRCA*TLSGPS Trigger: AGAAGGGCCAGAGAGAGTTCAAGCGCATCTCCCGCA...ATAGCTGTAGTACTTTGACCCGAGGGGCATTTTCTCTCTTTGGTCAGTCTGTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029625.8 |
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| CDS-3UTR CCA 90 bp | GAAATGTTTGAAGACTTAGATGCCGATTCTCAGGCTGGAACTGAGGAAGACTTTTGGTACTCGATGCCGTaGCACAGCTGCAGGTTGGCG | + |
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Preference number: 4 (lower is better) Translates to: EMFEDLDADSQAGTEEDFWYSMP*HSCRLA Trigger: CGCCAACCTGCAGCTGTGCCACGGCATCGAGTACCA...AAAGTCTTCCTCAGTTCCAGCCTGAGAATCGGCATCTAAGTCTTCAAACATTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029625.8 |
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| CDS-3UTR CCA 90 bp | TATAAACTGAAGTTCTGTAGCTGGGATGGGAACGCATGCAATGGTCAGAGCTCACGCTTGAACTCTCTCTaGCCCTTCTGCCACCGTTTC | + |
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Preference number: 4 (lower is better) Translates to: YKLKFCSWDGNACNGQSSRLNSL*PFCHRF Trigger: GAAACGGTGGCAGAAGGGCCAGAGAGAGTTCAAGCG...TGAGCTCTGACCATTGCATGCGTTCCCATCCCAGCTACAGAACTTCAGTTTATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029625.8 |
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| CDS-3UTR TCA 90 bp | TATAAACTGAAGTTCTGTAGCTGGGATGGGAACGCATGCAATGGTCAGAGCTCACCAGATACGGAGCGTTaGTGTCGTTCATCTCCTCAC | + |
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Preference number: 4 (lower is better) Translates to: YKLKFCSWDGNACNGQSSPDTER*CRSSPH Trigger: GTGAGGAGATGAACGACATCAACGCTCCGTATCTGG...TGAGCTCTGACCATTGCATGCGTTCCCATCCCAGCTACAGAACTTCAGTTTATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029625.8 |
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| CDS-3UTR GCA 90 bp | CAACAGACTGACCAAAGAGAGAAAATGCCCCTCGGGTCAAAGTACTACAGCTATGGATGGGCTTGCAGTTaGTGCGCTTGTAGGAGAAGT | + |
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Preference number: 4 (lower is better) Translates to: QQTDQREKMPLGSKYYSYGWACS*CACRRS Trigger: ACTTCTCCTACAAGCGCAGCAACTGCAAGCCCATCC...ATAGCTGTAGTACTTTGACCCGAGGGGCATTTTCTCTCTTTGGTCAGTCTGTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029625.8 |
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| CDS-3UTR CCA 90 bp | TTTCCAGGTCAACTACTACGTATATTACAGGTAAGCTACAATGATTTAGTTTGCGTGGCCGGCAGGAGGTaGTCGCTACTAGCGAGGGGG | + |
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Preference number: 4 (lower is better) Translates to: FPGQLLRILQVSYNDLVCVAGRR*SLLARG Trigger: CCCCCTCGCTAGTAGCGACCACCTCCTGCCGGCCAC...GCAAACTAAATCATTGTAGCTTACCTGTAATATACGTAGTAGTTGACCTGGAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029625.8 |
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| CDS-3UTR CCA 90 bp | TTTGTACAAGATCTGGATGGGCTTTTCGCTTTCCGTGAAAACAGCTATGGGTTTTTCTTGGTGTCCGGGTaGCACTGCTTCATGACCAGC | + |
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Preference number: 4 (lower is better) Translates to: FVQDLDGLFAFRENSYGFFLVSG*HCFMTS Trigger: GCTGGTCATGAAGCAGTGCCACCCGGACACCAAGAA...AAACCCATAGCTGTTTTCACGGAAAGCGAAAAGCCCATCCAGATCTTGTACAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000029625.8 |
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| CDS-3UTR TCA 90 bp | TTTCCAGGTCAACTACTACGTATATTACAGGTAAGCTACAATGATTTAGTTTGCGGTGGCACTGCTTCATaGCCAGCGGAATCCAGGCGC | + |
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Preference number: 4 (lower is better) Translates to: FPGQLLRILQVSYNDLVCGGTAS*PAESRR Trigger: GCGCCTGGATTCCGCTGGTCATGAAGCAGTGCCACC...GCAAACTAAATCATTGTAGCTTACCTGTAATATACGTAGTAGTTGACCTGGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029625.8 |
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| CDS-3UTR CCA 90 bp | CCAGCTTTATCTCAACTAAGTCTGGGACCCACAAGCTTAGACCACAGAGGGAAATGTCGTCCTCATTCTTaGTTTTGCAGGCTTCACACA | + |
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Preference number: 4 (lower is better) Translates to: PALSQLSLGPTSLDHRGKCRPHS*FCRLHT Trigger: TGTGTGAAGCCTGCAAAACCAAGAATGAGGACGACA...TTTCCCTCTGTGGTCTAAGCTTGTGGGTCCCAGACTTAGTTGAGATAAAGCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029625.8 |
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| CDS-3UTR TCA 90 bp | CTCCTAGGGCCTTATAACTCAGGACATGTTAGGGATACACACATGCAGGAGGCATTATCTCCTTCACTTTaGTTTTCAGTGCGAAGTCAT | + |
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Preference number: 4 (lower is better) Translates to: LLGPYNSGHVRDTHMQEALSPSL*FSVRSH Trigger: ATGACTTCGCACTGAAAATCAAAGTGAAGGAGATAA...TGCCTCCTGCATGTGTGTATCCCTAACATGTCCTGAGTTATAAGGCCCTAGGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029625.8 |
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| CDS-3UTR GCA 90 bp | TTTCCAGGTCAACTACTACGTATATTACAGGTAAGCTACAATGATTTAGTTTGCTGTTCTGGTACTCGATaGCGTGGCACAGCTGCAGGT | + |
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Preference number: 4 (lower is better) Translates to: FPGQLLRILQVSYNDLVCCSGTR*RGTAAG Trigger: ACCTGCAGCTGTGCCACGGCATCGAGTACCAGAACA...GCAAACTAAATCATTGTAGCTTACCTGTAATATACGTAGTAGTTGACCTGGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029625.8 |
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| CDS-3UTR GCA 90 bp | ACTTTTTATTTGAGGGCATCATGCAATGAGGAATGGTTACTGTGTGCTTATAAATCCTCACAGGTGCACTaGAGGCTGTCTTTGAGCCAC | + |
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Preference number: 4 (lower is better) Translates to: TFYLRASCNEEWLLCAYKSSQVH*RLSLSH Trigger: GTGGCTCAAAGACAGCCTGCAGTGCACCTGTGAGGA...TTTATAAGCACACAGTAACCATTCCTCATTGCATGATGCCCTCAAATAAAAAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029625.8 |
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| CDS-3UTR CCA 90 bp | TTTGTACAAGATCTGGATGGGCTTTTCGCTTTCCGTGAAAACAGCTATGGGTTTCGTTCAGCTTGTAAATaGTCTTGCTCTTTGTCTCCA | + |
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Preference number: 4 (lower is better) Translates to: FVQDLDGLFAFRENSYGFRSACK*SCSLSP Trigger: TGGAGACAAAGAGCAAGACCATTTACAAGCTGAACG...AAACCCATAGCTGTTTTCACGGAAAGCGAAAAGCCCATCCAGATCTTGTACAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029625.8 |
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| CDS GCA 90 bp | GGCTGGCCGAAGAGGAAGAGCCCACGCGCCGAGCCCAGGCAGCAGTaGGAGGCGAGGACTAGCAGCAGCAGCGAGGCAGGGCCCCGCGGC | + |
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Preference number: 5 (lower is better) Translates to: GWPKRKSPRAEPRQQ*EARTSSSSEAGPRG Trigger: GCCGCGGGGCCCTGCCTCGCTGCTGCTGCTAGTCCTCGCCTCGCACTGCTGCCTGGGCTCGGCGCGTGGGCTCTTCCTCTTCGGCCAGCC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029625.8 |
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| CDS GCA 90 bp | CGATGCCGTGGCACAGCTGCAGGTTGGCGGGGATGGGCTTGCAGTTaGTGCGCTTGTAGGAGAAGTCGGGCTGGCCGAAGAGGAAGAGCC | + |
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Preference number: 5 (lower is better) Translates to: RCRGTAAGWRGWACS*CACRRSRAGRRGRA Trigger: GGCTCTTCCTCTTCGGCCAGCCCGACTTCTCCTACAAGCGCAGCAACTGCAAGCCCATCCCCGCCAACCTGCAGCTGTGCCACGGCATCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029625.8 |
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| CDS CCA 90 bp | CAGGCTTCACACACCTTGGGAGCTTCCTCTGTGGCCGGCAGGAGGTaGTCGCTACTAGCGAGGGGGATGCAGAGGTCGTTGTCCTGCGGG | + |
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Preference number: 5 (lower is better) Translates to: QASHTLGASSVAGRR*SLLARGMQRSLSCG Trigger: CCCGCAGGACAACGACCTCTGCATCCCCCTCGCTAGTAGCGACCACCTCCTGCCGGCCACAGAGGAAGCTCCCAAGGTGTGTGAAGCCTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029625.8 |
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| CDS TCA 90 bp | GACATGACCGGGGCGCAGCGGTCCTTCACCTGCACGCAGAGCGAGTaGCACGGCTGGATGGTCTCATCTAGGTCGTCGAGACAGACAGGG | + |
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Preference number: 5 (lower is better) Translates to: DMTGAQRSFTCTQSE*HGWMVSSRSSRQTG Trigger: CCCTGTCTGTCTCGACGACCTAGATGAGACCATCCAGCCGTGTCACTCGCTCTGCGTGCAGGTGAAGGACCGCTGCGCCCCGGTCATGTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029625.8 |
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| CDS-3UTR CAA 90 bp | GGTCGCGGAGCGGAAGTGGTCTACAGAGCTCAGGGCCTGGATGGAGAGAAGCCAGGGATGCAGAGGTCGTaGTCCTGCGGGAAACGGTCG | + |
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Preference number: 5 (lower is better) Translates to: GRGAEVVYRAQGLDGEKPGMQRS*SCGKRS Trigger: CGACCGTTTCCCGCAGGACAACGACCTCTGCATCCC...TGGCTTCTCTCCATCCAGGCCCTGAGCTCTGTAGACCACTTCCGCTCCGCGACC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029625.8 |
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| CDS GCA 90 bp | TTGCGGATGCTGCGGGAGATGCGCTTGAACTCTCTCTGGCCCTTCTaGCACCGTTTCACGGAGGTGATCACCAGCTCGCCGCCCTGCTTC | + |
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Preference number: 5 (lower is better) Translates to: LRMLREMRLNSLWPF*HRFTEVITSSPPCF Trigger: GAAGCAGGGCGGCGAGCTGGTGATCACCTCCGTGAAACGGTGGCAGAAGGGCCAGAGAGAGTTCAAGCGCATCTCCCGCAGCATCCGCAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029625.8 |
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| CDS CCA 90 bp | GCAGCCGCATGTTCTGGTACTCGATGCCGTGGCACAGCTGCAGGTTaGCGGGGATGGGCTTGCAGTTGCTGCGCTTGTAGGAGAAGTCGG | + |
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Preference number: 5 (lower is better) Translates to: AAACSGTRCRGTAAG*RGWACSCCACRRSR Trigger: CCGACTTCTCCTACAAGCGCAGCAACTGCAAGCCCATCCCCGCCAACCTGCAGCTGTGCCACGGCATCGAGTACCAGAACATGCGGCTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029625.8 |
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| CDS CCA 90 bp | CATTGCAGCTTGCGGATGCTGCGGGAGATGCGCTTGAACTCTCTCTaGCCCTTCTGCCACCGTTTCACGGAGGTGATCACCAGCTCGCCG | + |
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Preference number: 5 (lower is better) Translates to: HCSLRMLREMRLNSL*PFCHRFTEVITSSP Trigger: CGGCGAGCTGGTGATCACCTCCGTGAAACGGTGGCAGAAGGGCCAGAGAGAGTTCAAGCGCATCTCCCGCAGCATCCGCAAGCTGCAATG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029625.8 |
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| CDS-3UTR CAA 90 bp | GGAAATGAGGTCGCGGAGCGGAAGTGGTCTACAGAGCTCAGGGCCTGGATGGAGGAGCACAGGAACTTCTaGGTGTCCGGGTGGCACTGC | + |
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Preference number: 5 (lower is better) Translates to: GNEVAERKWSTELRAWMEEHRNF*VSGWHC Trigger: GCAGTGCCACCCGGACACCAAGAAGTTCCTGTGCTC...CTCCATCCAGGCCCTGAGCTCTGTAGACCACTTCCGCTCCGCGACCTCATTTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029625.8 |
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| CDS-3UTR CAA 90 bp | TGCAGGAGGCAGGGCAAGCGGCTCCAAGCTGGGGCTGTAGCTTTCCCGGACTGTCACTGCAGGCTGTCTTaGAGCCACAGCACGGATTTC | + |
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Preference number: 5 (lower is better) Translates to: CRRQGKRLQAGAVAFPDCHCRLS*SHSTDF Trigger: GAAATCCGTGCTGTGGCTCAAAGACAGCCTGCAGTG...ACAGTCCGGGAAAGCTACAGCCCCAGCTTGGAGCCGCTTGCCCTGCCTCCTGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029625.8 |
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| CDS GCA 90 bp | CCCTTCTGCCACCGTTTCACGGAGGTGATCACCAGCTCGCCGCCCTaGTTCTGTCCCATGACCAGATACGGAGCGTTGATGTCGTTCATC | + |
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Preference number: 5 (lower is better) Translates to: PFCHRFTEVITSSPP*FCPMTRYGALMSFI Trigger: GATGAACGACATCAACGCTCCGTATCTGGTCATGGGACAGAAGCAGGGCGGCGAGCTGGTGATCACCTCCGTGAAACGGTGGCAGAAGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029625.8 |
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| CDS-3UTR CAA 90 bp | GGAAATGAGGTCGCGGAGCGGAAGTGGTCTACAGAGCTCAGGGCCTGGATGGAGACCAGATACGGAGCGTaGATGTCGTTCATCTCCTCA | + |
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Preference number: 5 (lower is better) Translates to: GNEVAERKWSTELRAWMETRYGA*MSFISS Trigger: TGAGGAGATGAACGACATCAACGCTCCGTATCTGGT...CTCCATCCAGGCCCTGAGCTCTGTAGACCACTTCCGCTCCGCGACCTCATTTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029625.8 |
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| CDS-3UTR CAA 90 bp | TCCGTGAAAACAGCTATGGGTTTCCAAGGCCTCCTAGGGCCTTATAACTCAGGACAGGCTTCACACACCTaGGGAGCTTCCTCTGTGGCC | + |
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Preference number: 5 (lower is better) Translates to: SVKTAMGFQGLLGPYNSGQASHT*GASSVA Trigger: GGCCACAGAGGAAGCTCCCAAGGTGTGTGAAGCCTG...TCCTGAGTTATAAGGCCCTAGGAGGCCTTGGAAACCCATAGCTGTTTTCACGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029625.8 |
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| CDS GCA 90 bp | ACCAGATACGGAGCGTTGATGTCGTTCATCTCCTCACAGGTGCACTaGAGGCTGTCTTTGAGCCACAGCACGGATTTCTTCAGGTCCCTT | + |
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Preference number: 5 (lower is better) Translates to: TRYGALMSFISSQVH*RLSLSHSTDFFRSL Trigger: AAGGGACCTGAAGAAATCCGTGCTGTGGCTCAAAGACAGCCTGCAGTGCACCTGTGAGGAGATGAACGACATCAACGCTCCGTATCTGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029625.8 |
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| CDS-3UTR CAA 90 bp | TTTGTACAAGATCTGGATGGGCTTTTCGCTTTCCGTGAAAACAGCTATGGGTTTCTGCGGGAGATGCGCTaGAACTCTCTCTGGCCCTTC | + |
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Preference number: 5 (lower is better) Translates to: FVQDLDGLFAFRENSYGFLREMR*NSLWPF Trigger: GAAGGGCCAGAGAGAGTTCAAGCGCATCTCCCGCAG...AAACCCATAGCTGTTTTCACGGAAAGCGAAAAGCCCATCCAGATCTTGTACAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029625.8 |
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| CDS-3UTR CAA 90 bp | CAACAGACTGACCAAAGAGAGAAAATGCCCCTCGGGTCAAAGTACTACAGCTATTTGTCGTCCTCATTCTaGGTTTTGCAGGCTTCACAC | + |
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Preference number: 5 (lower is better) Translates to: QQTDQREKMPLGSKYYSYLSSSF*VLQASH Trigger: GTGTGAAGCCTGCAAAACCAAGAATGAGGACGACAA...ATAGCTGTAGTACTTTGACCCGAGGGGCATTTTCTCTCTTTGGTCAGTCTGTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029625.8 |
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| CDS-3UTR CAA 90 bp | CCAGCTTTATCTCAACTAAGTCTGGGACCCACAAGCTTAGACCACAGAGGGAAAATCTTGGTGTCTCTGTaGATGTACGTTATCTCCTTC | + |
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Preference number: 5 (lower is better) Translates to: PALSQLSLGPTSLDHRGKILVSL*MYVISF Trigger: GAAGGAGATAACGTACATCAACAGAGACACCAAGAT...TTTCCCTCTGTGGTCTAAGCTTGTGGGTCCCAGACTTAGTTGAGATAAAGCTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029625.8 |
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| CDS-3UTR CAA 90 bp | CAACAGACTGACCAAAGAGAGAAAATGCCCCTCGGGTCAAAGTACTACAGCTATGTTATCTCCTTCACTTaGATTTTCAGTGCGAAGTCA | + |
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Preference number: 5 (lower is better) Translates to: QQTDQREKMPLGSKYYSYVISFT*IFSAKS Trigger: TGACTTCGCACTGAAAATCAAAGTGAAGGAGATAAC...ATAGCTGTAGTACTTTGACCCGAGGGGCATTTTCTCTCTTTGGTCAGTCTGTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029625.8 |
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| CDS-3UTR CAA 90 bp | TTTCCAGGTCAACTACTACGTATATTACAGGTAAGCTACAATGATTTAGTTTGCTCCTCATTCTTGGTTTaGCAGGCTTCACACACCTTG | + |
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Preference number: 5 (lower is better) Translates to: FPGQLLRILQVSYNDLVCSSFLV*QASHTL Trigger: CAAGGTGTGTGAAGCCTGCAAAACCAAGAATGAGGA...GCAAACTAAATCATTGTAGCTTACCTGTAATATACGTAGTAGTTGACCTGGAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029625.8 |
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| CDS-3UTR CAA 90 bp | TTTCCAGGTCAACTACTACGTATATTACAGGTAAGCTACAATGATTTAGTTTGCGTCTCCAGGATGATCTaGGTGTCTCTGTTGATGTAC | + |
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Preference number: 5 (lower is better) Translates to: FPGQLLRILQVSYNDLVCVSRMI*VSLLMY Trigger: GTACATCAACAGAGACACCAAGATCATCCTGGAGAC...GCAAACTAAATCATTGTAGCTTACCTGTAATATACGTAGTAGTTGACCTGGAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029625.8 |
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| CDS GCA 72 bp | CACTGCTTCATGACCAGCGGAATCCAGGCGCCCGCCTaGTCCAGCACCTCCTTCATGGTCTCGTGGCCCAGC | + |
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Preference number: 6 (lower is better) Translates to: HCFMTSGIQAPA*SSTSFMVSWPS Trigger: GCTGGGCCACGAGACCATGAAGGAGGTGCTGGAGCAGGCGGGCGCCTGGATTCCGCTGGTCATGAAGCAGTG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029625.8 |
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| CDS TCA 72 bp | GGGGCGCAGCGGTCCTTCACCTGCACGCAGAGCGAGTaGCACGGCTGGATGGTCTCATCTAGGTCGTCGAGA | + |
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Preference number: 6 (lower is better) Translates to: GAQRSFTCTQSE*HGWMVSSRSSR Trigger: TCTCGACGACCTAGATGAGACCATCCAGCCGTGTCACTCGCTCTGCGTGCAGGTGAAGGACCGCTGCGCCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029625.8 |
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| CDS GCA 72 bp | GGCACAGCTGCAGGTTGGCGGGGATGGGCTTGCAGTTaGTGCGCTTGTAGGAGAAGTCGGGCTGGCCGAAGA | + |
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Preference number: 6 (lower is better) Translates to: GTAAGWRGWACS*CACRRSRAGRR Trigger: TCTTCGGCCAGCCCGACTTCTCCTACAAGCGCAGCAACTGCAAGCCCATCCCCGCCAACCTGCAGCTGTGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029625.8 |
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| CDS GCA 72 bp | AGCGAGCACAGGAACTTCTTGGTGTCCGGGTGGCACTaGTTCATGACCAGCGGAATCCAGGCGCCCGCCTGC | + |
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Preference number: 6 (lower is better) Translates to: SEHRNFLVSGWH*FMTSGIQAPAC Trigger: GCAGGCGGGCGCCTGGATTCCGCTGGTCATGAAGCAGTGCCACCCGGACACCAAGAAGTTCCTGTGCTCGCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029625.8 |
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| CDS CCA 72 bp | CACACCTTGGGAGCTTCCTCTGTGGCCGGCAGGAGGTaGTCGCTACTAGCGAGGGGGATGCAGAGGTCGTTG | + |
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Preference number: 6 (lower is better) Translates to: HTLGASSVAGRR*SLLARGMQRSL Trigger: CAACGACCTCTGCATCCCCCTCGCTAGTAGCGACCACCTCCTGCCGGCCACAGAGGAAGCTCCCAAGGTGTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029625.8 |
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| CDS TCA 72 bp | ACAGGAACTTCTTGGTGTCCGGGTGGCACTGCTTCATaGCCAGCGGAATCCAGGCGCCCGCCTGCTCCAGCA | + |
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Preference number: 6 (lower is better) Translates to: TGTSWCPGGTAS*PAESRRPPAPA Trigger: TGCTGGAGCAGGCGGGCGCCTGGATTCCGCTGGTCATGAAGCAGTGCCACCCGGACACCAAGAAGTTCCTGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029625.8 |
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| CDS GCA 72 bp | CTGCGGGAGATGCGCTTGAACTCTCTCTGGCCCTTCTaGCACCGTTTCACGGAGGTGATCACCAGCTCGCCG | + |
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Preference number: 6 (lower is better) Translates to: LREMRLNSLWPF*HRFTEVITSSP Trigger: CGGCGAGCTGGTGATCACCTCCGTGAAACGGTGGCAGAAGGGCCAGAGAGAGTTCAAGCGCATCTCCCGCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029625.8 |
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| CDS CCA 72 bp | ACTCGATGCCGTGGCACAGCTGCAGGTTGGCGGGGATaGGCTTGCAGTTGCTGCGCTTGTAGGAGAAGTCGG | + |
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Preference number: 6 (lower is better) Translates to: TRCRGTAAGWRG*ACSCCACRRSR Trigger: CCGACTTCTCCTACAAGCGCAGCAACTGCAAGCCCATCCCCGCCAACCTGCAGCTGTGCCACGGCATCGAGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029625.8 |
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| CDS CCA 72 bp | CCTTCACCTGCACGCAGAGCGAGTGACACGGCTGGATaGTCTCATCTAGGTCGTCGAGACAGACAGGGGCGA | + |
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Preference number: 6 (lower is better) Translates to: PSPARRASDTAG*SHLGRRDRQGR Trigger: TCGCCCCTGTCTGTCTCGACGACCTAGATGAGACCATCCAGCCGTGTCACTCGCTCTGCGTGCAGGTGAAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029625.8 |
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| CDS TCA 72 bp | AGCATTGCAGCTTGCGGATGCTGCGGGAGATGCGCTTaGACTCTCTCTGGCCCTTCTGCCACCGTTTCACGG | + |
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Preference number: 6 (lower is better) Translates to: SIAACGCCGRCA*TLSGPSATVSR Trigger: CCGTGAAACGGTGGCAGAAGGGCCAGAGAGAGTTCAAGCGCATCTCCCGCAGCATCCGCAAGCTGCAATGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029625.8 |
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| CDS GCA 72 bp | CACCGTTTCACGGAGGTGATCACCAGCTCGCCGCCCTaGTTCTGTCCCATGACCAGATACGGAGCGTTGATG | + |
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Preference number: 6 (lower is better) Translates to: HRFTEVITSSPP*FCPMTRYGALM Trigger: CATCAACGCTCCGTATCTGGTCATGGGACAGAAGCAGGGCGGCGAGCTGGTGATCACCTCCGTGAAACGGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029625.8 |
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| CDS CCA 72 bp | TTGCGGATGCTGCGGGAGATGCGCTTGAACTCTCTCTaGCCCTTCTGCCACCGTTTCACGGAGGTGATCACC | + |
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Preference number: 6 (lower is better) Translates to: LRMLREMRLNSL*PFCHRFTEVIT Trigger: GGTGATCACCTCCGTGAAACGGTGGCAGAAGGGCCAGAGAGAGTTCAAGCGCATCTCCCGCAGCATCCGCAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029625.8 |
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| CDS CAA 90 bp | ACCAGCTCGCCGCCCTGCTTCTGTCCCATGACCAGATACGGAGCGTaGATGTCGTTCATCTCCTCACAGGTGCACTGCAGGCTGTCTTTG | + |
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Preference number: 6 (lower is better) Translates to: TSSPPCFCPMTRYGA*MSFISSQVHCRLSL Trigger: CAAAGACAGCCTGCAGTGCACCTGTGAGGAGATGAACGACATCAACGCTCCGTATCTGGTCATGGGACAGAAGCAGGGCGGCGAGCTGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029625.8 |
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| CDS CAA 72 bp | CCGCCCTGCTTCTGTCCCATGACCAGATACGGAGCGTaGATGTCGTTCATCTCCTCACAGGTGCACTGCAGG | + |
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Preference number: 6 (lower is better) Translates to: PPCFCPMTRYGA*MSFISSQVHCR Trigger: CCTGCAGTGCACCTGTGAGGAGATGAACGACATCAACGCTCCGTATCTGGTCATGGGACAGAAGCAGGGCGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029625.8 |
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| CDS TCA 72 bp | CGTTCATCTCCTCACAGGTGCACTGCAGGCTGTCTTTaGGCCACAGCACGGATTTCTTCAGGTCCCTTTCGG | + |
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Preference number: 6 (lower is better) Translates to: RSSPHRCTAGCL*ATARISSGPFR Trigger: CCGAAAGGGACCTGAAGAAATCCGTGCTGTGGCTCAAAGACAGCCTGCAGTGCACCTGTGAGGAGATGAACG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029625.8 |
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| CDS GCA 72 bp | GGAGCGTTGATGTCGTTCATCTCCTCACAGGTGCACTaGAGGCTGTCTTTGAGCCACAGCACGGATTTCTTC | + |
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Preference number: 6 (lower is better) Translates to: GALMSFISSQVH*RLSLSHSTDFF Trigger: GAAGAAATCCGTGCTGTGGCTCAAAGACAGCCTGCAGTGCACCTGTGAGGAGATGAACGACATCAACGCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029625.8 |
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| CDS CAA 90 bp | TTACAAAGGGTTTCCATGATGTCGTTGTCGTCCTCATTCTTGGTTTaGCAGGCTTCACACACCTTGGGAGCTTCCTCTGTGGCCGGCAGG | + |
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Preference number: 6 (lower is better) Translates to: LQRVSMMSLSSSFLV*QASHTLGASSVAGR Trigger: CCTGCCGGCCACAGAGGAAGCTCCCAAGGTGTGTGAAGCCTGCAAAACCAAGAATGAGGACGACAACGACATCATGGAAACCCTTTGTAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029625.8 |
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| CDS CAA 72 bp | GTTTCCATGATGTCGTTGTCGTCCTCATTCTTGGTTTaGCAGGCTTCACACACCTTGGGAGCTTCCTCTGTG | + |
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Preference number: 6 (lower is better) Translates to: VSMMSLSSSFLV*QASHTLGASSV Trigger: CACAGAGGAAGCTCCCAAGGTGTGTGAAGCCTGCAAAACCAAGAATGAGGACGACAACGACATCATGGAAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029625.8 |
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| CDS CAA 72 bp | CAAAGGGTTTCCATGATGTCGTTGTCGTCCTCATTCTaGGTTTTGCAGGCTTCACACACCTTGGGAGCTTCC | + |
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Preference number: 6 (lower is better) Translates to: QRVSMMSLSSSF*VLQASHTLGAS Trigger: GGAAGCTCCCAAGGTGTGTGAAGCCTGCAAAACCAAGAATGAGGACGACAACGACATCATGGAAACCCTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029625.8 |
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| CDS CAA 90 bp | TCATTTTTACAAAGGGTTTCCATGATGTCGTTGTCGTCCTCATTCTaGGTTTTGCAGGCTTCACACACCTTGGGAGCTTCCTCTGTGGCC | + |
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Preference number: 6 (lower is better) Translates to: SFLQRVSMMSLSSSF*VLQASHTLGASSVA Trigger: GGCCACAGAGGAAGCTCCCAAGGTGTGTGAAGCCTGCAAAACCAAGAATGAGGACGACAACGACATCATGGAAACCCTTTGTAAAAATGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029625.8 |
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| CDS CAA 72 bp | TTGCTCTTTGTCTCCAGGATGATCTTGGTGTCTCTGTaGATGTACGTTATCTCCTTCACTTTGATTTTCAGT | + |
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Preference number: 6 (lower is better) Translates to: LLFVSRMILVSL*MYVISFTLIFS Trigger: ACTGAAAATCAAAGTGAAGGAGATAACGTACATCAACAGAGACACCAAGATCATCCTGGAGACAAAGAGCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029625.8 |
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