Pregenerated sensors for SFRP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031548Ensembl transcript IDs: ENSMUST00000033952.8
Found 109 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCAGAGTCTATGGATACTGTCTCCTTCCACAGCTATACTGATTCCTaGGCAGCCAGGCACAGCCATGAGGCCCATCTCCTCCACAGCACA | + |
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Preference number: 1 (lower is better) Translates to: AESMDTVSFHSYTDS*AARHSHEAHLLHST Trigger: TGTGCTGTGGAGGAGATGGGCCTCATGGCTGTGCCTGGCTGCCCAGGAATCAGTATAGCTGTGGAAGGAGACAGTATCCATAGACTCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033952.8 |
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| 3UTR TCA 90 bp | CACATGATACACTTTCCCAAAATGAGCAGACCCCTCACCAAGCACTaGACTAGTAGTGGCTCAAGGCCCAGATCTACACACTCAGGAGAC | + |
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Preference number: 1 (lower is better) Translates to: HMIHFPKMSRPLTKH*TSSGSRPRSTHSGD Trigger: GTCTCCTGAGTGTGTAGATCTGGGCCTTGAGCCACTACTAGTTCAGTGCTTGGTGAGGGGTCTGCTCATTTTGGGAAAGTGTATCATGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033952.8 |
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| 3UTR CCA 90 bp | CTCCCACCCAAACCCTTAGCTATCCCGTTCTATACTGGGATACCCTaGCTACTTTCAGAAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT | + |
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Preference number: 1 (lower is better) Translates to: LPPKPLAIPFYTGIP*LLSEVCVCVCVCVC Trigger: ACACACACACACACACACACACACACACACTTCTGAAAGTAGCCAGGGTATCCCAGTATAGAACGGGATAGCTAAGGGTTTGGGTGGGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033952.8 |
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| 3UTR TCA 90 bp | TTGAAACCATCTCCTCGGATAGGGCACTTTAGCCTCAAAAGAATATaGCCGGAGGAATGCAAAAGTAAAGGTGGAGGGCTCAGGCAGGCA | + |
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Preference number: 1 (lower is better) Translates to: LKPSPRIGHFSLKRI*PEECKSKGGGLRQA Trigger: TGCCTGCCTGAGCCCTCCACCTTTACTTTTGCATTCCTCCGGTCATATTCTTTTGAGGCTAAAGTGCCCTATCCGAGGAGATGGTTTCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033952.8 |
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| 3UTR CCA 90 bp | TACCTCTGGATTGAGTATGCCAAAGGGACAGTCACTGTAGCCCCATaGATGCGGTGGGGAATTATCAGACTTTGGTGGAAGAAATTAACT | + |
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Preference number: 1 (lower is better) Translates to: YLWIEYAKGTVTVAP*MRWGIIRLWWKKLT Trigger: AGTTAATTTCTTCCACCAAAGTCTGATAATTCCCCACCGCATCCATGGGGCTACAGTGACTGTCCCTTTGGCATACTCAATCCAGAGGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033952.8 |
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| 3UTR TCA 90 bp | ATGTGGGCTTTTATCCCTGTCTTATGCTGCTGTTCTTTTGAAATGTaGCAGATGGAATTACAAAGTGAGGCTGTTGGCACAGGATTCCCC | + |
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Preference number: 1 (lower is better) Translates to: MWAFIPVLCCCSFEM*QMELQSEAVGTGFP Trigger: GGGGAATCCTGTGCCAACAGCCTCACTTTGTAATTCCATCTGTCACATTTCAAAAGAACAGCAGCATAAGACAGGGATAAAAGCCCACAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033952.8 |
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| 3UTR GCA 90 bp | ACTCTATTGTTGAAAACTAGTAGCTGTTGGCTTCTCAGCCTGAAATaGCTCATGTCTCTTCATGCCCACGTACCTCCTTCATACAAAAGC | + |
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Preference number: 1 (lower is better) Translates to: TLLLKTSSCWLLSLK*LMSLHAHVPPSYKS Trigger: GCTTTTGTATGAAGGAGGTACGTGGGCATGAAGAGACATGAGGCATTTCAGGCTGAGAAGCCAACAGCTACTAGTTTTCAACAATAGAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033952.8 |
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| 3UTR-3UTR GCA 90 bp | AAAACTAGTAGCTGTTGGCTTCTCAGCCTGAAATGCCTCATGTCTCTTCATGCCCTTTTGCACCGTGCCTaGTGGCCCTGCTGCAGCCCT | + |
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Preference number: 2 (lower is better) Translates to: KTSSCWLLSLKCLMSLHALLHRA*WPCCSP Trigger: AGGGCTGCAGCAGGGCCAGCAGGCACGGTGCAAAAG...GGCATGAAGAGACATGAGGCATTTCAGGCTGAGAAGCCAACAGCTACTAGTTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033952.8 |
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| 3UTR-3UTR TCA 90 bp | CTGAGACCTACAGTTTCCTATCAAAGGTGGCCAGTTCAAAAGCTGAAGGTAGAGGGTGAGAGCAATATGTaGGCCCCCAAGAGCCAGGGT | + |
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Preference number: 2 (lower is better) Translates to: LRPTVSYQRWPVQKLKVEGESNM*APKSQG Trigger: ACCCTGGCTCTTGGGGGCTCACATATTGCTCTCACC...CTCTACCTTCAGCTTTTGAACTGGCCACCTTTGATAGGAAACTGTAGGTCTCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033952.8 |
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| 3UTR-3UTR GCA 90 bp | AGGACAAAGGCTGCTGATCATGCAGCTTTCGGGCCCCTAGATAGCCTCCCTTTTGGGACAGACAGCTGCTaGAGTTCACATGATCAATTG | + |
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Preference number: 2 (lower is better) Translates to: RTKAADHAAFGPLDSLPFGTDSC*SSHDQL Trigger: CAATTGATCATGTGAACTGCAGCAGCTGTCTGTCCC...AAAAGGGAGGCTATCTAGGGGCCCGAAAGCTGCATGATCAGCAGCCTTTGTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033952.8 |
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| 3UTR-3UTR CCA 90 bp | CTGAGACCTACAGTTTCCTATCAAAGGTGGCCAGTTCAAAAGCTGAAGGTAGAGGGCCGTGGCCTTAGCTaGATGTGGCTATGGAGGGAA | + |
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Preference number: 2 (lower is better) Translates to: LRPTVSYQRWPVQKLKVEGRGLS*MWLWRE Trigger: TTCCCTCCATAGCCACATCCAGCTAAGGCCACGGCC...CTCTACCTTCAGCTTTTGAACTGGCCACCTTTGATAGGAAACTGTAGGTCTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033952.8 |
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| 3UTR CAA 90 bp | CTTTTCATTGGCAACGCTGGTCAGAGCGCACATGGACCACCTCCATaGGAAGCCAGGGACAAAGCTAATGAGTCTGCACATTGGTTTGTT | + |
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Preference number: 2 (lower is better) Translates to: LFIGNAGQSAHGPPP*EARDKANESAHWFV Trigger: AACAAACCAATGTGCAGACTCATTAGCTTTGTCCCTGGCTTCCAATGGAGGTGGTCCATGTGCGCTCTGACCAGCGTTGCCAATGAAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033952.8 |
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| 3UTR-3UTR CCA 90 bp | TGTGTGTGTGTGTGTGTGTGTGTGTGTTTTGAAGGTGGCGATGGTCTATCTAAGAGCTGGATGTGGCTATaGAGGGAAGGGAGAGGGTTC | + |
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Preference number: 2 (lower is better) Translates to: CVCVCVCVCFEGGDGLSKSWMWL*REGRGF Trigger: GAACCCTCTCCCTTCCCTCCATAGCCACATCCAGCT...CTTAGATAGACCATCGCCACCTTCAAAACACACACACACACACACACACACACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033952.8 |
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| 3UTR-3UTR TCA 90 bp | AAGGGGACAGACAGCTGCTGCAGTTCACATGATCAATTGATCGATCAATTGGTTCTTCCACAGCTATACTaGTTCCTGGGCAGCCAGGCA | + |
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Preference number: 2 (lower is better) Translates to: KGTDSCCSSHDQLIDQLVLPQLY*FLGSQA Trigger: TGCCTGGCTGCCCAGGAATCAGTATAGCTGTGGAAG...AACCAATTGATCGATCAATTGATCATGTGAACTGCAGCAGCTGTCTGTCCCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033952.8 |
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| 3UTR-3UTR GCA 90 bp | CTGGTCTGTGTGTGTGTGTGTGTGTGTCTGAAATCCTCACAGGTCCGCAACAAAAGGAACAGAGCCAGGTaGAATGCAAAAGCCACAACT | + |
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Preference number: 2 (lower is better) Translates to: LVCVCVCVCLKSSQVRNKRNRAR*NAKATT Trigger: AGTTGTGGCTTTTGCATTGCACCTGGCTCTGTTCCT...TTTGTTGCGGACCTGTGAGGATTTCAGACACACACACACACACACACAGACCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033952.8 |
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| 3UTR-3UTR CCA 90 bp | AAAACTAGTAGCTGTTGGCTTCTCAGCCTGAAATGCCTCATGTCTCTTCATGCCAAGCAGACCCTTGCCTaGCATCCTTGTATCCCGATG | + |
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Preference number: 2 (lower is better) Translates to: KTSSCWLLSLKCLMSLHAKQTLA*HPCIPM Trigger: CATCGGGATACAAGGATGCCAGGCAAGGGTCTGCTT...GGCATGAAGAGACATGAGGCATTTCAGGCTGAGAAGCCAACAGCTACTAGTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033952.8 |
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| 3UTR CAA 90 bp | CCAGGGACAAAGCTAATGAGTCTGCACATTGGTTTGTTACACCTTTaGTTGAAAAGGACAAAGGCTGCTGATCATGCAGCTTTCGGGCCC | + |
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Preference number: 2 (lower is better) Translates to: PGTKLMSLHIGLLHL*LKRTKAADHAAFGP Trigger: GGGCCCGAAAGCTGCATGATCAGCAGCCTTTGTCCTTTTCAACAAAAGGTGTAACAAACCAATGTGCAGACTCATTAGCTTTGTCCCTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033952.8 |
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| 3UTR-3UTR TCA 90 bp | TGTGTGTGTGTGTGTGTGTGTGTGTGTTTTGAAGGTGGCGATGGTCTATCTAAGAGCCTGGCTTGGCAATaGTCAGACTCTTCTACCTGT | + |
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Preference number: 2 (lower is better) Translates to: CVCVCVCVCFEGGDGLSKSLAWQ*SDSSTC Trigger: ACAGGTAGAAGAGTCTGATCATTGCCAAGCCAGGCT...CTTAGATAGACCATCGCCACCTTCAAAACACACACACACACACACACACACACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033952.8 |
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| 3UTR-3UTR TCA 90 bp | AGGACAAAGGCTGCTGATCATGCAGCTTTCGGGCCCCTAGATAGCCTCCCTTTTTCCAAGGCCACTAGATaGTTCTTCAAAATCATTCCT | + |
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Preference number: 2 (lower is better) Translates to: RTKAADHAAFGPLDSLPFSKATR*FFKIIP Trigger: AGGAATGATTTTGAAGAATCATCTAGTGGCCTTGGA...AAAAGGGAGGCTATCTAGGGGCCCGAAAGCTGCATGATCAGCAGCCTTTGTCCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000033952.8 |
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| 3UTR-3UTR TCA 90 bp | CTGGTCTGTGTGTGTGTGTGTGTGTGTCTGAAATCCTCACAGGTCCGCAACAAAGTTATGAATCCTTCCTaGGGAAGTTACTTCCTGAGG | + |
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Preference number: 2 (lower is better) Translates to: LVCVCVCVCLKSSQVRNKVMNPS*GSYFLR Trigger: CCTCAGGAAGTAACTTCCTCAGGAAGGATTCATAAC...TTTGTTGCGGACCTGTGAGGATTTCAGACACACACACACACACACACAGACCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033952.8 |
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| 3UTR-3UTR GCA 90 bp | CTGGTCTGTGTGTGTGTGTGTGTGTGTCTGAAATCCTCACAGGTCCGCAACAAACAGAGCCAGGTGCAATaGAAAAGCCACAACTGTAAT | + |
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Preference number: 2 (lower is better) Translates to: LVCVCVCVCLKSSQVRNKQSQVQ*KSHNCN Trigger: ATTACAGTTGTGGCTTTTGCATTGCACCTGGCTCTG...TTTGTTGCGGACCTGTGAGGATTTCAGACACACACACACACACACACAGACCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033952.8 |
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| 3UTR-3UTR TCA 90 bp | GGTTTGTTACACCTTTTGTTGAAAAGGACAAAGGCTGCTGATCATGCAGCTTTCTTCCCCCAATCACCCTaGCTTGTGACCTGCTTGACA | + |
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Preference number: 2 (lower is better) Translates to: GLLHLLLKRTKAADHAAFFPQSP*LVTCLT Trigger: TGTCAAGCAGGTCACAAGTCAGGGTGATTGGGGGAA...GAAAGCTGCATGATCAGCAGCCTTTGTCCTTTTCAACAAAAGGTGTAACAAACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000033952.8 |
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| 3UTR-3UTR TCA 90 bp | GGTTTGTTACACCTTTTGTTGAAAAGGACAAAGGCTGCTGATCATGCAGCTTTCGAGGAAGTTACTTCCTaGGGGTTCCCAATCTGGAGC | + |
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Preference number: 2 (lower is better) Translates to: GLLHLLLKRTKAADHAAFEEVTS*GFPIWS Trigger: GCTCCAGATTGGGAACCCTCAGGAAGTAACTTCCTC...GAAAGCTGCATGATCAGCAGCCTTTGTCCTTTTCAACAAAAGGTGTAACAAACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033952.8 |
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| 3UTR-3UTR GCA 90 bp | TGTGTGTGTTTTGAAGGTGGCGATGGTCTATCTAAGGCAGAAAGAGGGGGATTATCAGTGAAAGGATTCTaGCTCTCCTTTTGCACCGTG | + |
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Preference number: 2 (lower is better) Translates to: CVCFEGGDGLSKAERGGLSVKGF*LSFCTV Trigger: CACGGTGCAAAAGGAGAGGCAGAATCCTTTCACTGA...TAATCCCCCTCTTTCTGCCTTAGATAGACCATCGCCACCTTCAAAACACACACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000033952.8 |
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| 3UTR CAA 90 bp | TGGAGGGTATGTGGGCTTTTATCCCTGTCTTATGCTGCTGTTCTTTaGAAATGTGACAGATGGAATTACAAAGTGAGGCTGTTGGCACAG | + |
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Preference number: 2 (lower is better) Translates to: WRVCGLLSLSYAAVL*KCDRWNYKVRLLAQ Trigger: CTGTGCCAACAGCCTCACTTTGTAATTCCATCTGTCACATTTCAAAAGAACAGCAGCATAAGACAGGGATAAAAGCCCACATACCCTCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033952.8 |
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| 3UTR-3UTR TCA 90 bp | CTGAGACCTACAGTTTCCTATCAAAGGTGGCCAGTTCAAAAGCTGAAGGTAGAGGGATTAATAATAAACTaGAAGCAGCCTGGCTTGGCA | + |
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Preference number: 2 (lower is better) Translates to: LRPTVSYQRWPVQKLKVEGLIIN*KQPGLA Trigger: TGCCAAGCCAGGCTGCTTTCAGTTTATTATTAATCC...CTCTACCTTCAGCTTTTGAACTGGCCACCTTTGATAGGAAACTGTAGGTCTCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033952.8 |
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| 3UTR CAA 90 bp | GTGACCTGCTTGACATTTCTACCTTTGCTCATTTCTTCCACTCTATaGTTGAAAACTAGTAGCTGTTGGCTTCTCAGCCTGAAATGCCTC | + |
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Preference number: 2 (lower is better) Translates to: VTCLTFLPLLISSTL*LKTSSCWLLSLKCL Trigger: GAGGCATTTCAGGCTGAGAAGCCAACAGCTACTAGTTTTCAACAATAGAGTGGAAGAAATGAGCAAAGGTAGAAATGTCAAGCAGGTCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033952.8 |
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| 3UTR-3UTR TCA 90 bp | GGGCAGTCAACGACGTTAGTCTTTGAAATGCTGAGTGTGGACTTTTACTCAAGCATGCTGCTGTTCTTTTaGAATGTGACAGATGGAATT | + |
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Preference number: 2 (lower is better) Translates to: GQSTTLVFEMLSVDFYSSMLLFF*NVTDGI Trigger: AATTCCATCTGTCACATTTCAAAAGAACAGCAGCAT...GCTTGAGTAAAAGTCCACACTCAGCATTTCAAAGACTAACGTCGTTGACTGCCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033952.8 |
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| 3UTR-3UTR CCA 90 bp | GGTTTGTTACACCTTTTGTTGAAAAGGACAAAGGCTGCTGATCATGCAGCTTTCTTGAAATGTGACAGATaGAATTACAAAGTGAGGCTG | + |
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Preference number: 2 (lower is better) Translates to: GLLHLLLKRTKAADHAAFLKCDR*NYKVRL Trigger: CAGCCTCACTTTGTAATTCCATCTGTCACATTTCAA...GAAAGCTGCATGATCAGCAGCCTTTGTCCTTTTCAACAAAAGGTGTAACAAACC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033952.8 |
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| 3UTR CCA 72 bp | CCACAGCGCCAGGTCAGAGCAGCCAACATGCCATCCTaGAGATGTGACCCCGGGTCTGCTTCTGGAGCACAT | + |
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Preference number: 3 (lower is better) Translates to: PQRQVRAANMPS*RCDPGSASGAH Trigger: ATGTGCTCCAGAAGCAGACCCGGGGTCACATCTCCAGGATGGCATGTTGGCTGCTCTGACCTGGCGCTGTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033952.8 |
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| 3UTR GCA 72 bp | GCCCGAGGCTCAGTGAAAGGATTCTGCCTCTCCTTTTaGACCGTGCCTGCTGGCCCTGCTGCAGCCCTTAAA | + |
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Preference number: 3 (lower is better) Translates to: ARGSVKGFCLSF*TVPAGPAAALK Trigger: TTTAAGGGCTGCAGCAGGGCCAGCAGGCACGGTGCAAAAGGAGAGGCAGAATCCTTTCACTGAGCCTCGGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033952.8 |
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| 3UTR TCA 72 bp | GCAAAAGCCACAACTGTAATGGGTGAGAGCAATATGTaGGCCCCCAAGAGCCAGGGTCATCCACGCGCCCCC | + |
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Preference number: 3 (lower is better) Translates to: AKATTVMGESNM*APKSQGHPRAP Trigger: GGGGGCGCGTGGATGACCCTGGCTCTTGGGGGCTCACATATTGCTCTCACCCATTACAGTTGTGGCTTTTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033952.8 |
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| 3UTR CCA 72 bp | CTTCCTAATCTAAAGGGCCGTGGCCTTAGCTGGATGTaGCTATGGAGGGAAGGGAGAGGGTTCGCTGTAGGA | + |
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Preference number: 3 (lower is better) Translates to: LPNLKGRGLSWM*LWREGRGFAVG Trigger: TCCTACAGCGAACCCTCTCCCTTCCCTCCATAGCCACATCCAGCTAAGGCCACGGCCCTTTAGATTAGGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033952.8 |
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| 3UTR CCA 72 bp | AAAAGCCTTCCTAATCTAAAGGGCCGTGGCCTTAGCTaGATGTGGCTATGGAGGGAAGGGAGAGGGTTCGCT | + |
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Preference number: 3 (lower is better) Translates to: KSLPNLKGRGLS*MWLWREGRGFA Trigger: AGCGAACCCTCTCCCTTCCCTCCATAGCCACATCCAGCTAAGGCCACGGCCCTTTAGATTAGGAAGGCTTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033952.8 |
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| 3UTR TCA 72 bp | AGCCAGGTGCAATGCAAAAGCCACAACTGTAATGGGTaGGAGCAATATGTGAGCCCCCAAGAGCCAGGGTCA | + |
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Preference number: 3 (lower is better) Translates to: SQVQCKSHNCNG*EQYVSPQEPGS Trigger: TGACCCTGGCTCTTGGGGGCTCACATATTGCTCTCACCCATTACAGTTGTGGCTTTTGCATTGCACCTGGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033952.8 |
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| 3UTR TCA 72 bp | AGTGAGGCTGTTGGCACAGGATTCCCCCAATCACCCTaGCTTGTGACCTGCTTGACATTTCTACCTTTGCTC | + |
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Preference number: 3 (lower is better) Translates to: SEAVGTGFPQSP*LVTCLTFLPLL Trigger: GAGCAAAGGTAGAAATGTCAAGCAGGTCACAAGTCAGGGTGATTGGGGGAATCCTGTGCCAACAGCCTCACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033952.8 |
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| 3UTR CCA 72 bp | CCTCCCACCCAAACCCTTAGCTATCCCGTTCTATACTaGGATACCCTGGCTACTTTCAGAAGTGTGTGTGTG | + |
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Preference number: 3 (lower is better) Translates to: PPTQTLSYPVLY*DTLATFRSVCV Trigger: CACACACACACTTCTGAAAGTAGCCAGGGTATCCCAGTATAGAACGGGATAGCTAAGGGTTTGGGTGGGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033952.8 |
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| 3UTR TCA 72 bp | AGAGGGCAGCCTTGGGCAGTCAACGACGTTAGTCTTTaGAATGCTGAGTGTGGACTTTTACTCAAGCCTTGG | + |
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Preference number: 3 (lower is better) Translates to: RGQPWAVNDVSL*NAECGLLLKPW Trigger: CCAAGGCTTGAGTAAAAGTCCACACTCAGCATTTCAAAGACTAACGTCGTTGACTGCCCAAGGCTGCCCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033952.8 |
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| 3UTR TCA 72 bp | TCTCCTCGGATAGGGCACTTTAGCCTCAAAAGAATATaGCCGGAGGAATGCAAAAGTAAAGGTGGAGGGCTC | + |
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Preference number: 3 (lower is better) Translates to: SPRIGHFSLKRI*PEECKSKGGGL Trigger: GAGCCCTCCACCTTTACTTTTGCATTCCTCCGGTCATATTCTTTTGAGGCTAAAGTGCCCTATCCGAGGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033952.8 |
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| 3UTR GCA 72 bp | TTGGCTTCTCAGCCTGAAATGCCTCATGTCTCTTCATaGCCACGTACCTCCTTCATACAAAAGCAGACCCTT | + |
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Preference number: 3 (lower is better) Translates to: LASQPEMPHVSS*PRTSFIQKQTL Trigger: AAGGGTCTGCTTTTGTATGAAGGAGGTACGTGGGCATGAAGAGACATGAGGCATTTCAGGCTGAGAAGCCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033952.8 |
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| 3UTR CCA 72 bp | GCCAAAGGGACAGTCACTGTAGCCCCATGGATGCGGTaGGGAATTATCAGACTTTGGTGGAAGAAATTAACT | + |
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Preference number: 3 (lower is better) Translates to: AKGTVTVAPWMR*GIIRLWWKKLT Trigger: AGTTAATTTCTTCCACCAAAGTCTGATAATTCCCCACCGCATCCATGGGGCTACAGTGACTGTCCCTTTGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033952.8 |
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| 3UTR-3UTR CAA 90 bp | TGTTGGCTTCTCAGCCTGAAATGCCTCATGTCTCTTCATGCCCACGTACCTCCTAACATTTTCTGTTTTTaGTGCCCGAGGCTCAGTGAA | + |
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Preference number: 3 (lower is better) Translates to: CWLLSLKCLMSLHAHVPPNIFCF*CPRLSE Trigger: TTCACTGAGCCTCGGGCACAAAAAACAGAAAATGTT...AGGAGGTACGTGGGCATGAAGAGACATGAGGCATTTCAGGCTGAGAAGCCAACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033952.8 |
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| 3UTR-3UTR CAA 90 bp | AGGACAAAGGCTGCTGATCATGCAGCTTTCGGGCCCCTAGATAGCCTCCCTTTTTATGCTGCTGTTCTTTaGAAATGTGACAGATGGAAT | + |
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Preference number: 3 (lower is better) Translates to: RTKAADHAAFGPLDSLPFYAAVL*KCDRWN Trigger: ATTCCATCTGTCACATTTCAAAAGAACAGCAGCATA...AAAAGGGAGGCTATCTAGGGGCCCGAAAGCTGCATGATCAGCAGCCTTTGTCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033952.8 |
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| 3UTR GCA 72 bp | TTGAAAACTAGTAGCTGTTGGCTTCTCAGCCTGAAATaGCTCATGTCTCTTCATGCCCACGTACCTCCTTCA | + |
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Preference number: 3 (lower is better) Translates to: LKTSSCWLLSLK*LMSLHAHVPPS Trigger: TGAAGGAGGTACGTGGGCATGAAGAGACATGAGGCATTTCAGGCTGAGAAGCCAACAGCTACTAGTTTTCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033952.8 |
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| 3UTR CCA 72 bp | AAACCCTTAGCTATCCCGTTCTATACTGGGATACCCTaGCTACTTTCAGAAGTGTGTGTGTGTGTGTGTGTG | + |
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Preference number: 3 (lower is better) Translates to: KPLAIPFYTGIP*LLSEVCVCVCV Trigger: CACACACACACACACACACACTTCTGAAAGTAGCCAGGGTATCCCAGTATAGAACGGGATAGCTAAGGGTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033952.8 |
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| 3UTR-3UTR CAA 90 bp | CTGGTCTGTGTGTGTGTGTGTGTGTGTCTGAAATCCTCACAGGTCCGCAACAAAACAATCCGTTTTGTTTaGTTTTTCCAAACCGGCCAA | + |
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Preference number: 3 (lower is better) Translates to: LVCVCVCVCLKSSQVRNKTIRFV*FFQTGQ Trigger: TTGGCCGGTTTGGAAAAACAAAACAAAACGGATTGT...TTTGTTGCGGACCTGTGAGGATTTCAGACACACACACACACACACACAGACCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000033952.8 |
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| 3UTR TCA 72 bp | CTAGATGATTCTTCAAAATCATTCCTACCTCTGGATTaGGTATGCCAAAGGGACAGTCACTGTAGCCCCATG | + |
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Preference number: 3 (lower is better) Translates to: LDDSSKSFLPLD*VCQRDSHCSPM Trigger: CATGGGGCTACAGTGACTGTCCCTTTGGCATACTCAATCCAGAGGTAGGAATGATTTTGAAGAATCATCTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033952.8 |
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| 3UTR TCA 72 bp | ACTCTCCGGAATGACTATTTTAAAGCTTTCCAAATCTaGCCTTTTCATTGGCAACGCTGGTCAGAGCGCACA | + |
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Preference number: 3 (lower is better) Translates to: TLRNDYFKAFQI*PFHWQRWSERT Trigger: TGTGCGCTCTGACCAGCGTTGCCAATGAAAAGGTCAGATTTGGAAAGCTTTAAAATAGTCATTCCGGAGAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033952.8 |
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| 3UTR TCA 72 bp | GATCAATTGATCGATCAATTGGTTATGAATCCTTCCTaGGGAAGTTACTTCCTGAGGGTTCCCAATCTGGAG | + |
|
Preference number: 3 (lower is better) Translates to: DQLIDQLVMNPS*GSYFLRVPNLE Trigger: CTCCAGATTGGGAACCCTCAGGAAGTAACTTCCTCAGGAAGGATTCATAACCAATTGATCGATCAATTGATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033952.8 |
||
| 3UTR GCA 72 bp | TGGCTCAAGGCCCAGATCTACACACTCAGGAGACTTTaGATTTCAGTTATGGACAATGAGGTTAGACTATTT | + |
|
Preference number: 3 (lower is better) Translates to: WLKAQIYTLRRL*ISVMDNEVRLF Trigger: AAATAGTCTAACCTCATTGTCCATAACTGAAATGCAAAGTCTCCTGAGTGTGTAGATCTGGGCCTTGAGCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033952.8 |
||
| 3UTR CCA 72 bp | AGAAAGAGGGGGATTAATAATAAACTGAAAGCAGCCTaGCTTGGCAATGATCAGACTCTTCTACCTGTAGAG | + |
|
Preference number: 3 (lower is better) Translates to: RKRGINNKLKAA*LGNDQTLLPVE Trigger: CTCTACAGGTAGAAGAGTCTGATCATTGCCAAGCCAGGCTGCTTTCAGTTTATTATTAATCCCCCTCTTTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033952.8 |
||
| 3UTR TCA 72 bp | GATAGTTCCCAAAAGTTTGGTGGGTTTAGCTTTCCCTaGCTCTCCGGAATGACTATTTTAAAGCTTTCCAAA | + |
|
Preference number: 3 (lower is better) Translates to: DSSQKFGGFSFP*LSGMTILKLSK Trigger: TTTGGAAAGCTTTAAAATAGTCATTCCGGAGAGTCAGGGAAAGCTAAACCCACCAAACTTTTGGGAACTATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033952.8 |
||
| CDS-3UTR CCA 90 bp | TGTTGGCTTCTCAGCCTGAAATGCCTCATGTCTCTTCATGCCCACGTACCTCCTCGTAGTCGTACTCGCTaGCCGAACCCGCGGCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: CWLLSLKCLMSLHAHVPPRSRTR*PNPRPA Trigger: TGCTGGCCGCGGGTTCGGCCAGCGAGTACGACTACG...AGGAGGTACGTGGGCATGAAGAGACATGAGGCATTTCAGGCTGAGAAGCCAACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033952.8 |
||
| CDS-3UTR GCA 90 bp | TTTTGTGCCCGAGGCTCAGTGAAAGGATTCTGCCTCTCCTTTTGCACCGTGCCTACCCAGCTGCTGGCCTaGTGCTTCACCTCTGCCATG | + |
|
Preference number: 4 (lower is better) Translates to: FCARGSVKGFCLSFCTVPTQLLA*CFTSAM Trigger: CATGGCAGAGGTGAAGCAGCAGGCCAGCAGCTGGGT...AGGCACGGTGCAAAAGGAGAGGCAGAATCCTTTCACTGAGCCTCGGGCACAAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033952.8 |
||
| CDS-3UTR GCA 90 bp | GGGCAGTCAACGACGTTAGTCTTTGAAATGCTGAGTGTGGACTTTTACTCAAGCGCGGGGTCATGGCGATaGAGACGTCGCCCTCGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: GQSTTLVFEMLSVDFYSSAGSWR*RRRPRG Trigger: TCCCCGAGGGCGACGTCTGCATCGCCATGACCCCGC...GCTTGAGTAAAAGTCCACACTCAGCATTTCAAAGACTAACGTCGTTGACTGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033952.8 |
||
| CDS-3UTR TCA 90 bp | CTGGTCTGTGTGTGTGTGTGTGTGTGTCTGAAATCCTCACAGGTCCGCAACAAATGTGGCAGTTCTTGTTaGGCAGCGGCACCCAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LVCVCVCVCLKSSQVRNKCGSSC*AAAPSC Trigger: GCAGCTGGGTGCCGCTGCTCAACAAGAACTGCCACA...TTTGTTGCGGACCTGTGAGGATTTCAGACACACACACACACACACACAGACCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033952.8 |
||
| CDS-3UTR CCA 90 bp | AAGGGGACAGACAGCTGCTGCAGTTCACATGATCAATTGATCGATCAATTGGTTCGCACTGCGGGGGCTTaGTGTAGAAGCGCCCGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: KGTDSCCSSHDQLIDQLVRTAGA*CRSARS Trigger: AGAGCGGGCGCTTCTACACCAAGCCCCCGCAGTGCG...AACCAATTGATCGATCAATTGATCATGTGAACTGCAGCAGCTGTCTGTCCCCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033952.8 |
||
| CDS-3UTR CCA 90 bp | AAAACTAGTAGCTGTTGGCTTCTCAGCCTGAAATGCCTCATGTCTCTTCATGCCAGGTTGTCCAGCTGGTaGCAGGGACAGTCGGCACCG | + |
|
Preference number: 4 (lower is better) Translates to: KTSSCWLLSLKCLMSLHARLSSW*QGQSAP Trigger: CGGTGCCGACTGTCCCTGCCACCAGCTGGACAACCT...GGCATGAAGAGACATGAGGCATTTCAGGCTGAGAAGCCAACAGCTACTAGTTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033952.8 |
||
| CDS-3UTR TCA 90 bp | AAGGGGACAGACAGCTGCTGCAGTTCACATGATCAATTGATCGATCAATTGGTTAGCCGAAGAACTGCATaGCCGGCTCGCACGAGTCGC | + |
|
Preference number: 4 (lower is better) Translates to: KGTDSCCSSHDQLIDQLVSRRTA*PARTSR Trigger: GCGACTCGTGCGAGCCGGTCATGCAGTTCTTCGGCT...AACCAATTGATCGATCAATTGATCATGTGAACTGCAGCAGCTGTCTGTCCCCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033952.8 |
||
| CDS-3UTR CCA 90 bp | AAGGGGACAGACAGCTGCTGCAGTTCACATGATCAATTGATCGATCAATTGGTTTATTGGGCGGGGTCATaGCGATGCAGACGTCGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: KGTDSCCSSHDQLIDQLVYWAGS*RCRRRP Trigger: AGGGCGACGTCTGCATCGCCATGACCCCGCCCAATA...AACCAATTGATCGATCAATTGATCATGTGAACTGCAGCAGCTGTCTGTCCCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033952.8 |
||
| CDS-3UTR CCA 90 bp | TTTTGTGCCCGAGGCTCAGTGAAAGGATTCTGCCTCTCCTTTTGCACCGTGCCTATGATGAGAAAGTTGTaGCTGAGGTTGTCCAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: FCARGSVKGFCLSFCTVPMMRKL*LRLSSW Trigger: CCAGCTGGACAACCTCAGCCACAACTTTCTCATCAT...AGGCACGGTGCAAAAGGAGAGGCAGAATCCTTTCACTGAGCCTCGGGCACAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033952.8 |
||
| CDS-3UTR TCA 90 bp | CTGAGACCTACAGTTTCCTATCAAAGGTGGCCAGTTCAAAAGCTGAAGGTAGAGTCAGCTCCTTCTTCTTaGTGGGCCCCAGCTTCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: LRPTVSYQRWPVQKLKVESAPSS*WAPASR Trigger: CCTTGAAGCTGGGGCCCATCAAGAAGAAGGAGCTGA...CTCTACCTTCAGCTTTTGAACTGGCCACCTTTGATAGGAAACTGTAGGTCTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033952.8 |
||
| CDS-3UTR CCA 90 bp | GGGCAGTCAACGACGTTAGTCTTTGAAATGCTGAGTGTGGACTTTTACTCAAGCACCTGGGTGCCCATGTaGCAGTTCTTGTTGAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GQSTTLVFEMLSVDFYSSTWVPM*QFLLSS Trigger: GCTGCTCAACAAGAACTGCCACATGGGCACCCAGGT...GCTTGAGTAAAAGTCCACACTCAGCATTTCAAAGACTAACGTCGTTGACTGCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033952.8 |
||
| CDS-3UTR CCA 90 bp | TGTGTGTGTTTTGAAGGTGGCGATGGTCTATCTAAGGCAGAAAGAGGGGGATTAGAACAGAGGAAGACCTaGGTGCCCATGTGGCAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: CVCFEGGDGLSKAERGGLEQRKT*VPMWQF Trigger: GAACTGCCACATGGGCACCCAGGTCTTCCTCTGTTC...TAATCCCCCTCTTTCTGCCTTAGATAGACCATCGCCACCTTCAAAACACACACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033952.8 |
||
| CDS-3UTR CCA 90 bp | GGTTTGTTACACCTTTTGTTGAAAAGGACAAAGGCTGCTGATCATGCAGCTTTCAGGCTTCCGTGGTATTaGGCGGGGTCATGGCGATGC | + |
|
Preference number: 4 (lower is better) Translates to: GLLHLLLKRTKAADHAAFRLPWY*AGSWRC Trigger: GCATCGCCATGACCCCGCCCAATACCACGGAAGCCT...GAAAGCTGCATGATCAGCAGCCTTTGTCCTTTTCAACAAAAGGTGTAACAAACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033952.8 |
||
| CDS-3UTR CCA 90 bp | GGTTTGTTACACCTTTTGTTGAAAAGGACAAAGGCTGCTGATCATGCAGCTTTCCTGAGGTTGTCCAGCTaGTGGCAGGGACAGTCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: GLLHLLLKRTKAADHAAFLRLSS*WQGQSA Trigger: TGCCGACTGTCCCTGCCACCAGCTGGACAACCTCAG...GAAAGCTGCATGATCAGCAGCCTTTGTCCTTTTCAACAAAAGGTGTAACAAACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033952.8 |
||
| CDS-3UTR CCA 90 bp | ACTTTTACTCAAGCCTTGGAGGGTATGTGGGCTTTTATCCCTGTCTTATGCTGCCAACTCGTTGTCGCATaGAGGACACACGGTTGTACC | + |
|
Preference number: 4 (lower is better) Translates to: TFTQALEGMWAFIPVLCCQLVVA*RTHGCT Trigger: GGTACAACCGTGTGTCCTCCATGCGACAACGAGTTG...GCAGCATAAGACAGGGATAAAAGCCCACATACCCTCCAAGGCTTGAGTAAAAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033952.8 |
||
| CDS-3UTR CCA 90 bp | TGTGTGTGTGTGTGTGTGTGTGTGTGTTTTGAAGGTGGCGATGGTCTATCTAAGTGTCCCACTTGTGAATaGCTGTCAGCAGGTACTGGC | + |
|
Preference number: 4 (lower is better) Translates to: CVCVCVCVCFEGGDGLSKCPTCE*LSAGTG Trigger: GCCAGTACCTGCTGACAGCCATTCACAAGTGGGACA...CTTAGATAGACCATCGCCACCTTCAAAACACACACACACACACACACACACACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033952.8 |
||
| CDS-3UTR CCA 90 bp | AGGACAAAGGCTGCTGATCATGCAGCTTTCGGGCCCCTAGATAGCCTCCCTTTTAAGGTGGGACACTCGTaGTTTTTCATTCTCTTCATG | + |
|
Preference number: 4 (lower is better) Translates to: RTKAADHAAFGPLDSLPFKVGHS*FFILFM Trigger: CATGAAGAGAATGAAAAACCACGAGTGTCCCACCTT...AAAAGGGAGGCTATCTAGGGGCCCGAAAGCTGCATGATCAGCAGCCTTTGTCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000033952.8 |
||
| CDS-3UTR TCA 90 bp | GGGCAGTCAACGACGTTAGTCTTTGAAATGCTGAGTGTGGACTTTTACTCAAGCGGAACTTGTCACATTTaGGCATCTCGGGCCAGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: GQSTTLVFEMLSVDFYSSGTCHI*ASRASR Trigger: TCTACTGGCCCGAGATGCTCAAATGTGACAAGTTCC...GCTTGAGTAAAAGTCCACACTCAGCATTTCAAAGACTAACGTCGTTGACTGCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033952.8 |
||
| CDS-3UTR TCA 90 bp | ACTTTTACTCAAGCCTTGGAGGGTATGTGGGCTTTTATCCCTGTCTTATGCTGCTTCTTGTCCCACTTGTaGATGGCTGTCAGCAGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: TFTQALEGMWAFIPVLCCFLSHL*MAVSRY Trigger: GTACCTGCTGACAGCCATTCACAAGTGGGACAAGAA...GCAGCATAAGACAGGGATAAAAGCCCACATACCCTCCAAGGCTTGAGTAAAAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033952.8 |
||
| CDS-3UTR CCA 90 bp | AGTAGCTGTTGGCTTCTCAGCCTGAAATGCCTCATGTCTCTTCATGCCCACGTAAAACAGACTGGAAGGTaGGACACTCGTGGTTTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SSCWLLSLKCLMSLHAHVKQTGR*DTRGFS Trigger: TGAAAAACCACGAGTGTCCCACCTTCCAGTCTGTTT...TACGTGGGCATGAAGAGACATGAGGCATTTCAGGCTGAGAAGCCAACAGCTACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033952.8 |
||
| CDS-3UTR TCA 90 bp | CTGAGACCTACAGTTTCCTATCAAAGGTGGCCAGTTCAAAAGCTGAAGGTAGAGTTCAATGATGGCCTCTaGCTTCAACTCGTTGTCGCA | + |
|
Preference number: 4 (lower is better) Translates to: LRPTVSYQRWPVQKLKVEFNDGL*LQLVVA Trigger: TGCGACAACGAGTTGAAGTCAGAGGCCATCATTGAA...CTCTACCTTCAGCTTTTGAACTGGCCACCTTTGATAGGAAACTGTAGGTCTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033952.8 |
||
| CDS-3UTR TCA 90 bp | ACTTTTACTCAAGCCTTGGAGGGTATGTGGGCTTTTATCCCTGTCTTATGCTGCCACAGAGATGTTCAATaGTGGCCTCTGACTTCAACT | + |
|
Preference number: 4 (lower is better) Translates to: TFTQALEGMWAFIPVLCCHRDVQ*WPLTST Trigger: AGTTGAAGTCAGAGGCCATCATTGAACATCTCTGTG...GCAGCATAAGACAGGGATAAAAGCCCACATACCCTCCAAGGCTTGAGTAAAAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033952.8 |
||
| CDS-3UTR GCA 90 bp | CTGAGACCTACAGTTTCCTATCAAAGGTGGCCAGTTCAAAAGCTGAAGGTAGAGGATTTTCATCCTCAGTaGAAACTCGCTTGCACAGAG | + |
|
Preference number: 4 (lower is better) Translates to: LRPTVSYQRWPVQKLKVEDFHPQ*KLACTE Trigger: CTCTGTGCAAGCGAGTTTGCACTGAGGATGAAAATC...CTCTACCTTCAGCTTTTGAACTGGCCACCTTTGATAGGAAACTGTAGGTCTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033952.8 |
||
| CDS-3UTR GCA 90 bp | TGTGTGTGTTTTGAAGGTGGCGATGGTCTATCTAAGGCAGAAAGAGGGGGATTACAGTGCAAACTCGCTTaGACAGAGATGTTCAATGAT | + |
|
Preference number: 4 (lower is better) Translates to: CVCFEGGDGLSKAERGGLQCKLA*TEMFND Trigger: ATCATTGAACATCTCTGTGCAAGCGAGTTTGCACTG...TAATCCCCCTCTTTCTGCCTTAGATAGACCATCGCCACCTTCAAAACACACACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033952.8 |
||
| CDS-3UTR CCA 90 bp | CTGAGACCTACAGTTTCCTATCAAAGGTGGCCAGTTCAAAAGCTGAAGGTAGAGAGGGTTTCTTCTTCTTaGGGACAATCTTCTTGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: LRPTVSYQRWPVQKLKVERVSSS*GQSSCH Trigger: GTGACAAGAAGATTGTCCCCAAGAAGAAGAAACCCT...CTCTACCTTCAGCTTTTGAACTGGCCACCTTTGATAGGAAACTGTAGGTCTCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033952.8 |
||
| 3UTR CAA 72 bp | AAGCCAGGGACAAAGCTAATGAGTCTGCACATTGGTTaGTTACACCTTTTGTTGAAAAGGACAAAGGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: KPGTKLMSLHIG*LHLLLKRTKAA Trigger: AGCAGCCTTTGTCCTTTTCAACAAAAGGTGTAACAAACCAATGTGCAGACTCATTAGCTTTGTCCCTGGCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033952.8 |
||
| 3UTR CAA 72 bp | CTAATGAGTCTGCACATTGGTTTGTTACACCTTTTGTaGAAAAGGACAAAGGCTGCTGATCATGCAGCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LMSLHIGLLHLL*KRTKAADHAAF Trigger: GAAAGCTGCATGATCAGCAGCCTTTGTCCTTTTCAACAAAAGGTGTAACAAACCAATGTGCAGACTCATTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033952.8 |
||
| 3UTR CAA 72 bp | AAGCTAATGAGTCTGCACATTGGTTTGTTACACCTTTaGTTGAAAAGGACAAAGGCTGCTGATCATGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: KLMSLHIGLLHL*LKRTKAADHAA Trigger: AGCTGCATGATCAGCAGCCTTTGTCCTTTTCAACAAAAGGTGTAACAAACCAATGTGCAGACTCATTAGCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033952.8 |
||
| CDS CCA 90 bp | GATACGAGCCGATGTCGGACTGGAAGCTCACGTAGTCGTACTCGCTaGCCGAACCCGCGGCCAGCAGAGCGGCGGCCAACGCCAGCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: DTSRCRTGSSRSRTR*PNPRPAERRPTPAA Trigger: TGCTGCTGGCGTTGGCCGCCGCTCTGCTGGCCGCGGGTTCGGCCAGCGAGTACGACTACGTGAGCTTCCAGTCCGACATCGGCTCGTATC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033952.8 |
||
| CDS CCA 90 bp | GGCACAGCCTCAGGTCCACCGGGATGTCCACGCACTGCGGGGGCTTaGTGTAGAAGCGCCCGCTCTGATACGAGCCGATGTCGGACTGGA | + |
|
Preference number: 5 (lower is better) Translates to: GTASGPPGCPRTAGA*CRSARSDTSRCRTG Trigger: TCCAGTCCGACATCGGCTCGTATCAGAGCGGGCGCTTCTACACCAAGCCCCCGCAGTGCGTGGACATCCCGGTGGACCTGAGGCTGTGCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033952.8 |
||
| CDS TCA 90 bp | CACCGTTCTTCAGGAACAGCACAAGCCGCTTCAGCTCCTTCTTCTTaGTGGGCCCCAGCTTCAAGGGTTTCTTCTTCTTGGGGACAATCT | + |
|
Preference number: 5 (lower is better) Translates to: HRSSGTAQAASAPSS*WAPASRVSSSWGQS Trigger: AGATTGTCCCCAAGAAGAAGAAACCCTTGAAGCTGGGGCCCATCAAGAAGAAGGAGCTGAAGCGGCTTGTGCTGTTCCTGAAGAACGGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033952.8 |
||
| CDS-3UTR CAA 90 bp | TGTGTGTGTGTGTGTGTGTGTGTGTGTTTTGAAGGTGGCGATGGTCTATCTAAGCCCATGTGGCAGTTCTaGTTGAGCAGCGGCACCCAG | + |
|
Preference number: 5 (lower is better) Translates to: CVCVCVCVCFEGGDGLSKPMWQF*LSSGTQ Trigger: CTGGGTGCCGCTGCTCAACAAGAACTGCCACATGGG...CTTAGATAGACCATCGCCACCTTCAAAACACACACACACACACACACACACACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033952.8 |
||
| CDS-3UTR CAA 90 bp | AGTAGCTGTTGGCTTCTCAGCCTGAAATGCCTCATGTCTCTTCATGCCCACGTATCGCCCTCGGGGAACTaGTCACATTTGAGCATCTCG | + |
|
Preference number: 5 (lower is better) Translates to: SSCWLLSLKCLMSLHAHVSPSGN*SHLSIS Trigger: CGAGATGCTCAAATGTGACAAGTTCCCCGAGGGCGA...TACGTGGGCATGAAGAGACATGAGGCATTTCAGGCTGAGAAGCCAACAGCTACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033952.8 |
||
| CDS-3UTR CAA 90 bp | AAGGGGACAGACAGCTGCTGCAGTTCACATGATCAATTGATCGATCAATTGGTTGAGGCTTCCGTGGTATaGGGCGGGGTCATGGCGATG | + |
|
Preference number: 5 (lower is better) Translates to: KGTDSCCSSHDQLIDQLVEASVV*GGVMAM Trigger: CATCGCCATGACCCCGCCCAATACCACGGAAGCCTC...AACCAATTGATCGATCAATTGATCATGTGAACTGCAGCAGCTGTCTGTCCCCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033952.8 |
||
| CDS TCA 90 bp | CCTCAGTGCAAACTCGCTTGCACAGAGATGTTCAATGATGGCCTCTaGCTTCAACTCGTTGTCGCATGGAGGACACACGGTTGTACCTTG | + |
|
Preference number: 5 (lower is better) Translates to: PQCKLACTEMFNDGL*LQLVVAWRTHGCTL Trigger: CAAGGTACAACCGTGTGTCCTCCATGCGACAACGAGTTGAAGTCAGAGGCCATCATTGAACATCTCTGTGCAAGCGAGTTTGCACTGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033952.8 |
||
| CDS-3UTR CAA 90 bp | ACTTTTACTCAAGCCTTGGAGGGTATGTGGGCTTTTATCCCTGTCTTATGCTGCTCGTGCTCCAGCAGGTaGGGCAGCACCATCTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: TFTQALEGMWAFIPVLCCSCSSR*GSTIFL Trigger: CAAGAAGATGGTGCTGCCCAACCTGCTGGAGCACGA...GCAGCATAAGACAGGGATAAAAGCCCACATACCCTCCAAGGCTTGAGTAAAAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033952.8 |
||
| CDS-3UTR CAA 90 bp | GATGTCCCGAACAACGTTGAGCTGAGCAGCTGTCCGTCTGCAGTTCTTTACAATTCTGACTTCAACTCGTaGTCGCATGGAGGACACACG | + |
|
Preference number: 5 (lower is better) Translates to: DVPNNVELSSCPSAVLYNSDFNS*SHGGHT Trigger: CGTGTGTCCTCCATGCGACAACGAGTTGAAGTCAGA...ATTGTAAAGAACTGCAGACGGACAGCTGCTCAGCTCAACGTTGTTCGGGACATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033952.8 |
||
| CDS-3UTR CAA 90 bp | CTGAGACCTACAGTTTCCTATCAAAGGTGGCCAGTTCAAAAGCTGAAGGTAGAGAAGTTGTGGCTGAGGTaGTCCAGCTGGTGGCAGGGA | + |
|
Preference number: 5 (lower is better) Translates to: LRPTVSYQRWPVQKLKVEKLWLR*SSWWQG Trigger: TCCCTGCCACCAGCTGGACAACCTCAGCCACAACTT...CTCTACCTTCAGCTTTTGAACTGGCCACCTTTGATAGGAAACTGTAGGTCTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033952.8 |
||
| CDS-3UTR CAA 90 bp | AGTAGCTGTTGGCTTCTCAGCCTGAAATGCCTCATGTCTCTTCATGCCCACGTACCCATGATGAGAAAGTaGTGGCTGAGGTTGTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: SSCWLLSLKCLMSLHAHVPMMRK*WLRLSS Trigger: GCTGGACAACCTCAGCCACAACTTTCTCATCATGGG...TACGTGGGCATGAAGAGACATGAGGCATTTCAGGCTGAGAAGCCAACAGCTACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033952.8 |
||
| CDS-3UTR CAA 90 bp | AAGGGGACAGACAGCTGCTGCAGTTCACATGATCAATTGATCGATCAATTGGTTATGTGGCAGTTCTTGTaGAGCAGCGGCACCCAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: KGTDSCCSSHDQLIDQLVMWQFL*SSGTQL Trigger: CAGCTGGGTGCCGCTGCTCAACAAGAACTGCCACAT...AACCAATTGATCGATCAATTGATCATGTGAACTGCAGCAGCTGTCTGTCCCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033952.8 |
||
| CDS-3UTR CAA 90 bp | AAAACTAGTAGCTGTTGGCTTCTCAGCCTGAAATGCCTCATGTCTCTTCATGCCACACACGGTTGTACCTaGGGGCTTAGAGGCTTCCGT | + |
|
Preference number: 5 (lower is better) Translates to: KTSSCWLLSLKCLMSLHATHGCT*GLRGFR Trigger: ACGGAAGCCTCTAAGCCCCAAGGTACAACCGTGTGT...GGCATGAAGAGACATGAGGCATTTCAGGCTGAGAAGCCAACAGCTACTAGTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033952.8 |
||
| CDS-3UTR CAA 90 bp | TGTGTGTGTGTGTGTGTGTGTGTGTGTTTTGAAGGTGGCGATGGTCTATCTAAGTACTGGCTCTTCACCTaGCGGCCCATGATGAGAAAG | + |
|
Preference number: 5 (lower is better) Translates to: CVCVCVCVCFEGGDGLSKYWLFT*RPMMRK Trigger: CTTTCTCATCATGGGCCGCAAGGTGAAGAGCCAGTA...CTTAGATAGACCATCGCCACCTTCAAAACACACACACACACACACACACACACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033952.8 |
||
| CDS-3UTR CAA 90 bp | AGTAGCTGTTGGCTTCTCAGCCTGAAATGCCTCATGTCTCTTCATGCCCACGTATTGGGGACAATCTTCTaGTCACCGTTTTCCTTCTTC | + |
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Preference number: 5 (lower is better) Translates to: SSCWLLSLKCLMSLHAHVLGTIF*SPFSFF Trigger: GAAGAAGGAAAACGGTGACAAGAAGATTGTCCCCAA...TACGTGGGCATGAAGAGACATGAGGCATTTCAGGCTGAGAAGCCAACAGCTACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033952.8 |
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| CDS-3UTR CAA 90 bp | TGTTGGCTTCTCAGCCTGAAATGCCTCATGTCTCTTCATGCCCACGTACCTCCTAAGGGTTTCTTCTTCTaGGGGACAATCTTCTTGTCA | + |
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Preference number: 5 (lower is better) Translates to: CWLLSLKCLMSLHAHVPPKGFFF*GTIFLS Trigger: TGACAAGAAGATTGTCCCCAAGAAGAAGAAACCCTT...AGGAGGTACGTGGGCATGAAGAGACATGAGGCATTTCAGGCTGAGAAGCCAACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033952.8 |
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| CDS-3UTR CAA 90 bp | AGTAGCTGTTGGCTTCTCAGCCTGAAATGCCTCATGTCTCTTCATGCCCACGTATCCTTCTTCACTTCTTaGATTTTCATCCTCAGTGCA | + |
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Preference number: 5 (lower is better) Translates to: SSCWLLSLKCLMSLHAHVSFFTS*IFILSA Trigger: TGCACTGAGGATGAAAATCAAAGAAGTGAAGAAGGA...TACGTGGGCATGAAGAGACATGAGGCATTTCAGGCTGAGAAGCCAACAGCTACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033952.8 |
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| CDS-3UTR CAA 90 bp | CTGGTCTGTGTGTGTGTGTGTGTGTGTCTGAAATCCTCACAGGTCCGCAACAAAAAGTTTTTGAACTCCTaGTTTTTCTTGTCCCACTTG | + |
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Preference number: 5 (lower is better) Translates to: LVCVCVCVCLKSSQVRNKKFLNS*FFLSHL Trigger: CAAGTGGGACAAGAAAAACAAGGAGTTCAAAAACTT...TTTGTTGCGGACCTGTGAGGATTTCAGACACACACACACACACACACAGACCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000033952.8 |
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| CDS CCA 72 bp | CGATGTCGGACTGGAAGCTCACGTAGTCGTACTCGCTaGCCGAACCCGCGGCCAGCAGAGCGGCGGCCAACG | + |
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Preference number: 6 (lower is better) Translates to: RCRTGSSRSRTR*PNPRPAERRPT Trigger: CGTTGGCCGCCGCTCTGCTGGCCGCGGGTTCGGCCAGCGAGTACGACTACGTGAGCTTCCAGTCCGACATCG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033952.8 |
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| CDS CCA 72 bp | TCAGGTCCACCGGGATGTCCACGCACTGCGGGGGCTTaGTGTAGAAGCGCCCGCTCTGATACGAGCCGATGT | + |
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Preference number: 6 (lower is better) Translates to: SGPPGCPRTAGA*CRSARSDTSRC Trigger: ACATCGGCTCGTATCAGAGCGGGCGCTTCTACACCAAGCCCCCGCAGTGCGTGGACATCCCGGTGGACCTGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033952.8 |
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| CDS CAA 72 bp | ACGGTTGTACCTTGGGGCTTAGAGGCTTCCGTGGTATaGGGCGGGGTCATGGCGATGCAGACGTCGCCCTCG | + |
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Preference number: 6 (lower is better) Translates to: TVVPWGLEASVV*GGVMAMQTSPS Trigger: CGAGGGCGACGTCTGCATCGCCATGACCCCGCCCAATACCACGGAAGCCTCTAAGCCCCAAGGTACAACCGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033952.8 |
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| CDS CCA 72 bp | AACTCGTTGTCGCATGGAGGACACACGGTTGTACCTTaGGGCTTAGAGGCTTCCGTGGTATTGGGCGGGGTC | + |
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Preference number: 6 (lower is better) Translates to: NSLSHGGHTVVP*GLEASVVLGGV Trigger: GACCCCGCCCAATACCACGGAAGCCTCTAAGCCCCAAGGTACAACCGTGTGTCCTCCATGCGACAACGAGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033952.8 |
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| CDS CAA 72 bp | CAACTCGTTGTCGCATGGAGGACACACGGTTGTACCTaGGGGCTTAGAGGCTTCCGTGGTATTGGGCGGGGT | + |
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Preference number: 6 (lower is better) Translates to: QLVVAWRTHGCT*GLRGFRGIGRG Trigger: ACCCCGCCCAATACCACGGAAGCCTCTAAGCCCCAAGGTACAACCGTGTGTCCTCCATGCGACAACGAGTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033952.8 |
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| CDS CCA 72 bp | CCCATGATGAGAAAGTTGTGGCTGAGGTTGTCCAGCTaGTGGCAGGGACAGTCGGCACCGTTCTTCAGGAAC | + |
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Preference number: 6 (lower is better) Translates to: PMMRKLWLRLSS*WQGQSAPFFRN Trigger: GTTCCTGAAGAACGGTGCCGACTGTCCCTGCCACCAGCTGGACAACCTCAGCCACAACTTTCTCATCATGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033952.8 |
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| CDS CCA 72 bp | ATGATGAGAAAGTTGTGGCTGAGGTTGTCCAGCTGGTaGCAGGGACAGTCGGCACCGTTCTTCAGGAACAGC | + |
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Preference number: 6 (lower is better) Translates to: MMRKLWLRLSSW*QGQSAPFFRNS Trigger: GCTGTTCCTGAAGAACGGTGCCGACTGTCCCTGCCACCAGCTGGACAACCTCAGCCACAACTTTCTCATCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033952.8 |
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| CDS TCA 72 bp | TCAGGAACAGCACAAGCCGCTTCAGCTCCTTCTTCTTaGTGGGCCCCAGCTTCAAGGGTTTCTTCTTCTTGG | + |
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Preference number: 6 (lower is better) Translates to: SGTAQAASAPSS*WAPASRVSSSW Trigger: CCAAGAAGAAGAAACCCTTGAAGCTGGGGCCCATCAAGAAGAAGGAGCTGAAGCGGCTTGTGCTGTTCCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033952.8 |
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| CDS CAA 90 bp | TCGCTTGCACAGAGATGTTCAATGATGGCCTCTGACTTCAACTCGTaGTCGCATGGAGGACACACGGTTGTACCTTGGGGCTTAGAGGCT | + |
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Preference number: 6 (lower is better) Translates to: SLAQRCSMMASDFNS*SHGGHTVVPWGLEA Trigger: AGCCTCTAAGCCCCAAGGTACAACCGTGTGTCCTCCATGCGACAACGAGTTGAAGTCAGAGGCCATCATTGAACATCTCTGTGCAAGCGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033952.8 |
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| CDS TCA 72 bp | AAACTCGCTTGCACAGAGATGTTCAATGATGGCCTCTaGCTTCAACTCGTTGTCGCATGGAGGACACACGGT | + |
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Preference number: 6 (lower is better) Translates to: KLACTEMFNDGL*LQLVVAWRTHG Trigger: ACCGTGTGTCCTCCATGCGACAACGAGTTGAAGTCAGAGGCCATCATTGAACATCTCTGTGCAAGCGAGTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033952.8 |
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| CDS TCA 72 bp | TCCTCAGTGCAAACTCGCTTGCACAGAGATGTTCAATaGTGGCCTCTGACTTCAACTCGTTGTCGCATGGAG | + |
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Preference number: 6 (lower is better) Translates to: SSVQTRLHRDVQ*WPLTSTRCRME Trigger: CTCCATGCGACAACGAGTTGAAGTCAGAGGCCATCATTGAACATCTCTGTGCAAGCGAGTTTGCACTGAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033952.8 |
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