Pregenerated sensors for SFPQ (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028820Ensembl transcript IDs: ENSMUST00000030623.8
Found 79 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | AACAACAGGGAGAAACGCAACAAGATGATCTTTCCATTTTCAAAAGCTTTCAAGGCCTACACACGCTCATaGTTTCCAAGTGAAATACCT | + |
|
Preference number: 2 (lower is better) Translates to: NNREKRNKMIFPFSKAFKAYTRS*FPSEIP Trigger: AGGTATTTCACTTGGAAAGCATGAGCGTGTGTAGGC...CTTGAAAGCTTTTGAAAATGGAAAGATCATCTTGTTGCGTTTCTCCCTGTTGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030623.8 |
||
| 3UTR-3UTR GCA 90 bp | TACACACGCTCATGCTTTCCAAGTGAAATACCTAGCCTAATGTGCATAGAAGCATTACATAATTTTACCTaGCCAAACAGGCCATTTACA | + |
|
Preference number: 2 (lower is better) Translates to: YTRSCFPSEIPSLMCIEALHNFT*PNRPFT Trigger: TGTAAATGGCCTGTTTGGGCAGGTAAAATTATGTAA...TGCTTCTATGCACATTAGGCTAGGTATTTCACTTGGAAAGCATGAGCGTGTGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030623.8 |
||
| 3UTR-3UTR CCA 90 bp | AACAACAGGGAGAAACGCAACAAGATGATCTTTCCATTTTCAAAAGCTTTCAAGTACATTTCCCAGAAATaGCTTATGCCACTCAAAGGC | + |
|
Preference number: 2 (lower is better) Translates to: NNREKRNKMIFPFSKAFKYISQK*LMPLKG Trigger: GCCTTTGAGTGGCATAAGCCATTTCTGGGAAATGTA...CTTGAAAGCTTTTGAAAATGGAAAGATCATCTTGTTGCGTTTCTCCCTGTTGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030623.8 |
||
| 3UTR-3UTR CCA 90 bp | AACAACAGGGAGAAACGCAACAAGATGATCTTTCCATTTTCAAAAGCTTTCAAGAAAAATGGTACACTTTaGAAATTCGGTGGCACAAGG | + |
|
Preference number: 2 (lower is better) Translates to: NNREKRNKMIFPFSKAFKKNGTL*KFGGTR Trigger: CCTTGTGCCACCGAATTTCCAAAGTGTACCATTTTT...CTTGAAAGCTTTTGAAAATGGAAAGATCATCTTGTTGCGTTTCTCCCTGTTGTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030623.8 |
||
| 3UTR TCA 72 bp | TATATAAAAACAGTTCAACTCCATAGTGAGACTACTTaGCAGTCCTACTTGGTAACAGTCACCACTAGTTCT | + |
|
Preference number: 3 (lower is better) Translates to: YIKTVQLHSETT*QSYLVTVTTSS Trigger: AGAACTAGTGGTGACTGTTACCAAGTAGGACTGTCAAGTAGTCTCACTATGGAGTTGAACTGTTTTTATATA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030623.8 |
||
| CDS-3UTR TCA 90 bp | TACACACGCTCATGCTTTCCAAGTGAAATACCTAGCCTAATGTGCATAGAAGCAGGAGGCGGGGGCTGTTaGTGGGGCGGCTGGTGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: YTRSCFPSEIPSLMCIEAGGGGC*WGGWCG Trigger: GCCGCACCAGCCGCCCCATCAACAGCCCCCGCCTCC...TGCTTCTATGCACATTAGGCTAGGTATTTCACTTGGAAAGCATGAGCGTGTGTA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030623.8 |
||
| CDS-3UTR GCA 90 bp | TACACACGCTCATGCTTTCCAAGTGAAATACCTAGCCTAATGTGCATAGAAGCACACCAGGAGCGCCCATaGCCGGGCCACCTCCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: YTRSCFPSEIPSLMCIEAHQERP*PGHLQA Trigger: AGCCTGGAGGTGGCCCGGGCATGGGCGCTCCTGGTG...TGCTTCTATGCACATTAGGCTAGGTATTTCACTTGGAAAGCATGAGCGTGTGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030623.8 |
||
| CDS-3UTR GCA 90 bp | TACACACGCTCATGCTTTCCAAGTGAAATACCTAGCCTAATGTGCATAGAAGCAGGACCCGCACCTCCCTaGCCAAAGCGCTCAGTACGC | + |
|
Preference number: 4 (lower is better) Translates to: YTRSCFPSEIPSLMCIEAGPAPP*PKRSVR Trigger: GCGTACTGAGCGCTTTGGGCAGGGAGGTGCGGGTCC...TGCTTCTATGCACATTAGGCTAGGTATTTCACTTGGAAAGCATGAGCGTGTGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030623.8 |
||
| CDS-3UTR CCA 90 bp | TACACACGCTCATGCTTTCCAAGTGAAATACCTAGCCTAATGTGCATAGAAGCATGTGGTGGCTTCGGGTaGCCACCAGGAGCGCCCATG | + |
|
Preference number: 4 (lower is better) Translates to: YTRSCFPSEIPSLMCIEACGGFG*PPGAPM Trigger: CATGGGCGCTCCTGGTGGCCACCCGAAGCCACCACA...TGCTTCTATGCACATTAGGCTAGGTATTTCACTTGGAAAGCATGAGCGTGTGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030623.8 |
||
| CDS-3UTR TCA 90 bp | TCTCTCACTACCAATAGTTTTCACCCATCCATAATCTTAATACATGTTCCTGAAGGAGAGCGGAAGTCGTaGAGGCCGCCGCGGCCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SLTTNSFHPSIILIHVPEGERKS*RPPRPP Trigger: TGGCGGCCGCGGCGGCCTTCACGACTTCCGCTCTCC...TTCAGGAACATGTATTAAGATTATGGATGGGTGAAAACTATTGGTAGTGAGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030623.8 |
||
| CDS-3UTR GCA 90 bp | TTATGGTGGGAGGAAAGCATATTTTTACTATGTAGCCTAAGCAACTATCTCCAGACGGGCTTGGATTCCTaGGGCGGAGGCGGGGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LWWEESIFLLCSLSNYLQTGLDS*GGGGGC Trigger: ACAGCCCCCGCCTCCGCCGCAGGAATCCAAGCCCGT...CTGGAGATAGTTGCTTAGGCTACATAGTAAAAATATGCTTTCCTCCCACCATAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000030623.8 |
||
| CDS-3UTR CCA 90 bp | AACAACAGGGAGAAACGCAACAAGATGATCTTTCCATTTTCAAAAGCTTTCAAGATGGGGCCGCGGTTCTaGTTGAGGCCCATGCCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: NNREKRNKMIFPFSKAFKMGPRF*LRPMPG Trigger: GCCGGGCATGGGCCTCAACCAGAACCGCGGCCCCAT...CTTGAAAGCTTTTGAAAATGGAAAGATCATCTTGTTGCGTTTCTCCCTGTTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030623.8 |
||
| CDS-3UTR GCA 90 bp | TCTCTCACTACCAATAGTTTTCACCCATCCATAATCTTAATACATGTTCCTGAAGCCCACCGGGCATCTTaGCGCCTTTTGGACCGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SLTTNSFHPSIILIHVPEAHRAS*RLLDRQ Trigger: CTGGCGGTCCAAAAGGCGGCAAGATGCCCGGTGGGC...TTCAGGAACATGTATTAAGATTATGGATGGGTGAAAACTATTGGTAGTGAGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030623.8 |
||
| CDS-3UTR GCA 90 bp | TACACACGCTCATGCTTTCCAAGTGAAATACCTAGCCTAATGTGCATAGAAGCATCGAACAGACAGGGCTaGAGCGTGTGTGGCAAATCG | + |
|
Preference number: 4 (lower is better) Translates to: YTRSCFPSEIPSLMCIEASNRQG*SVCGKS Trigger: CGATTTGCCACACACGCTGCAGCCCTGTCTGTTCGA...TGCTTCTATGCACATTAGGCTAGGTATTTCACTTGGAAAGCATGAGCGTGTGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030623.8 |
||
| CDS-3UTR GCA 90 bp | TACACACGCTCATGCTTTCCAAGTGAAATACCTAGCCTAATGTGCATAGAAGCAGGAACCACTCATGGTTaGTGGTGGAACTCCAGGATT | + |
|
Preference number: 4 (lower is better) Translates to: YTRSCFPSEIPSLMCIEAGTTHG*WWNSRI Trigger: AATCCTGGAGTTCCACCAGCAACCATGAGTGGTTCC...TGCTTCTATGCACATTAGGCTAGGTATTTCACTTGGAAAGCATGAGCGTGTGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030623.8 |
||
| CDS-3UTR CCA 90 bp | TACACACGCTCATGCTTTCCAAGTGAAATACCTAGCCTAATGTGCATAGAAGCAACCACTCATGGTTGCTaGTGGAACTCCAGGATTAGC | + |
|
Preference number: 4 (lower is better) Translates to: YTRSCFPSEIPSLMCIEATTHGC*WNSRIS Trigger: GCTAATCCTGGAGTTCCACCAGCAACCATGAGTGGT...TGCTTCTATGCACATTAGGCTAGGTATTTCACTTGGAAAGCATGAGCGTGTGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030623.8 |
||
| CDS-3UTR CCA 90 bp | TACACACGCTCATGCTTTCCAAGTGAAATACCTAGCCTAATGTGCATAGAAGCATGTCGCTTCCCATCATaGAACCACTCATGGTTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: YTRSCFPSEIPSLMCIEACRFPS*NHSWLL Trigger: CAGCAACCATGAGTGGTTCCATGATGGGAAGCGACA...TGCTTCTATGCACATTAGGCTAGGTATTTCACTTGGAAAGCATGAGCGTGTGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030623.8 |
||
| CDS-3UTR GCA 90 bp | AACAACAGGGAGAAACGCAACAAGATGATCTTTCCATTTTCAAAAGCTTTCAAGCCCTCTACCATATCCTaGTGGAGTTCCAGGCCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: NNREKRNKMIFPFSKAFKPSTIS*WSSRPH Trigger: ATGGGGCCTGGAACTCCAGCAGGATATGGTAGAGGG...CTTGAAAGCTTTTGAAAATGGAAAGATCATCTTGTTGCGTTTCTCCCTGTTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030623.8 |
||
| CDS-3UTR CCA 90 bp | TACACACGCTCATGCTTTCCAAGTGAAATACCTAGCCTAATGTGCATAGAAGCAGCTGTCTACCTCTCATaGGAGTATCATCAAGCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: YTRSCFPSEIPSLMCIEAAVYLS*EYHQAQ Trigger: CTGAGCTTGATGATACTCCCATGAGAGGTAGACAGC...TGCTTCTATGCACATTAGGCTAGGTATTTCACTTGGAAAGCATGAGCGTGTGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030623.8 |
||
| CDS-3UTR CCA 90 bp | TACACACGCTCATGCTTTCCAAGTGAAATACCTAGCCTAATGTGCATAGAAGCACGCCTTAATTCTTCCTaGCGTCTCATCAGATCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: YTRSCFPSEIPSLMCIEARLNSS*RLIRSW Trigger: CCAAGATCTGATGAGACGCCAGGAAGAATTAAGGCG...TGCTTCTATGCACATTAGGCTAGGTATTTCACTTGGAAAGCATGAGCGTGTGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030623.8 |
||
| CDS-3UTR TCA 90 bp | TCTCTCACTACCAATAGTTTTCACCCATCCATAATCTTAATACATGTTCCTGAACAAGTGGTTCCACAATaGCTGGGCGAGGAGTCGTTG | + |
|
Preference number: 4 (lower is better) Translates to: SLTTNSFHPSIILIHVPEQVVPQ*LGEESL Trigger: CAACGACTCCTCGCCCAGTCATTGTGGAACCACTTG...TTCAGGAACATGTATTAAGATTATGGATGGGTGAAAACTATTGGTAGTGAGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030623.8 |
||
| CDS-3UTR CCA 90 bp | TACACACGCTCATGCTTTCCAAGTGAAATACCTAGCCTAATGTGCATAGAAGCACGTCTCATCAGATCTTaGCGCAAAAGATTTGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: YTRSCFPSEIPSLMCIEARLIRS*RKRFAW Trigger: CCAAGCAAATCTTTTGCGCCAAGATCTGATGAGACG...TGCTTCTATGCACATTAGGCTAGGTATTTCACTTGGAAAGCATGAGCGTGTGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030623.8 |
||
| CDS-3UTR CCA 90 bp | TACACACGCTCATGCTTTCCAAGTGAAATACCTAGCCTAATGTGCATAGAAGCATCTTCCATCTCACGTTaGCGAATCATCATCTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: YTRSCFPSEIPSLMCIEASSISR*RIIISS Trigger: GGAAGAGATGATGATTCGCCAACGTGAGATGGAAGA...TGCTTCTATGCACATTAGGCTAGGTATTTCACTTGGAAAGCATGAGCGTGTGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030623.8 |
||
| CDS-3UTR CCA 90 bp | AACAACAGGGAGAAACGCAACAAGATGATCTTTCCATTTTCAAAAGCTTTCAAGTCTACCATATCCTGCTaGAGTTCCAGGCCCCATTCC | + |
|
Preference number: 4 (lower is better) Translates to: NNREKRNKMIFPFSKAFKSTISC*SSRPHS Trigger: GGAATGGGGCCTGGAACTCCAGCAGGATATGGTAGA...CTTGAAAGCTTTTGAAAATGGAAAGATCATCTTGTTGCGTTTCTCCCTGTTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030623.8 |
||
| CDS-3UTR GCA 90 bp | TTATGGTGGGAGGAAAGCATATTTTTACTATGTAGCCTAAGCAACTATCTCCAGCGCCGTTCCTCCTCTTaGCTCAACTGCATTTCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: LWWEESIFLLCSLSNYLQRRSSS*LNCISL Trigger: TAAAGAAATGCAGTTGAGGCAAGAGGAGGAACGGCG...CTGGAGATAGTTGCTTAGGCTACATAGTAAAAATATGCTTTCCTCCCACCATAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030623.8 |
||
| CDS-3UTR CCA 90 bp | AACAGGGAGAAACGCAACAAGATGATCTTTCCATTTTCAAAAGCTTTCAAGGAATCATGGAACCACTCATaGTTGCTGGTGGAACTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: NREKRNKMIFPFSKAFKESWNHS*LLVELQ Trigger: CTGGAGTTCCACCAGCAACCATGAGTGGTTCCATGA...TTCCTTGAAAGCTTTTGAAAATGGAAAGATCATCTTGTTGCGTTTCTCCCTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030623.8 |
||
| CDS-3UTR TCA 90 bp | AACAACAGGGAGAAACGCAACAAGATGATCTTTCCATTTTCAAAAGCTTTCAAGTCAAATGTGCCATGCTaGGCAAAACGAGGTGGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: NNREKRNKMIFPFSKAFKSNVPC*AKRGGV Trigger: AACACCACCTCGTTTTGCTCAGCATGGCACATTTGA...CTTGAAAGCTTTTGAAAATGGAAAGATCATCTTGTTGCGTTTCTCCCTGTTGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030623.8 |
||
| CDS-3UTR GCA 90 bp | TACACACGCTCATGCTTTCCAAGTGAAATACCTAGCCTAATGTGCATAGAAGCATTCAAATGCTTTTCTTaGTGCTGGCTTGGAAGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: YTRSCFPSEIPSLMCIEAFKCFS*CWLGSK Trigger: TTTGCTTCCAAGCCAGCAGCAAGAAAAGCATTTGAA...TGCTTCTATGCACATTAGGCTAGGTATTTCACTTGGAAAGCATGAGCGTGTGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030623.8 |
||
| CDS-3UTR CCA 90 bp | TCTCTCACTACCAATAGTTTTCACCCATCCATAATCTTAATACATGTTCCTGAACATCAAGCTCAGCTTTaGCGATTTCAGCCAAGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: SLTTNSFHPSIILIHVPEHQAQL*RFQPRL Trigger: GAGCCTTGGCTGAAATCGCCAAAGCTGAGCTTGATG...TTCAGGAACATGTATTAAGATTATGGATGGGTGAAAACTATTGGTAGTGAGAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030623.8 |
||
| CDS-3UTR CCA 90 bp | TTATGGTGGGAGGAAAGCATATTTTTACTATGTAGCCTAAGCAACTATCTCCAGTTCTTGCTGCTGGCTTaGAAGCAAACTCAACAATGC | + |
|
Preference number: 4 (lower is better) Translates to: LWWEESIFLLCSLSNYLQFLLLA*KQTQQC Trigger: GCATTGTTGAGTTTGCTTCCAAGCCAGCAGCAAGAA...CTGGAGATAGTTGCTTAGGCTACATAGTAAAAATATGCTTTCCTCCCACCATAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030623.8 |
||
| CDS-3UTR CCA 90 bp | AACAGGGAGAAACGCAACAAGATGATCTTTCCATTTTCAAAAGCTTTCAAGGAAACTCATGGTTGCTGGTaGAACTCCAGGATTAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: NREKRNKMIFPFSKAFKETHGCW*NSRISF Trigger: GAAGCTAATCCTGGAGTTCCACCAGCAACCATGAGT...TTCCTTGAAAGCTTTTGAAAATGGAAAGATCATCTTGTTGCGTTTCTCCCTGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030623.8 |
||
| CDS-3UTR GCA 90 bp | AACAGGGAGAAACGCAACAAGATGATCTTTCCATTTTCAAAAGCTTTCAAGGAACCATGTAGCCCATCCTaGTGTAACTTTCTTCTCGTT | + |
|
Preference number: 4 (lower is better) Translates to: NREKRNKMIFPFSKAFKEPCSPS*CNFLLV Trigger: AACGAGAAGAAAGTTACAGCAGGATGGGCTACATGG...TTCCTTGAAAGCTTTTGAAAATGGAAAGATCATCTTGTTGCGTTTCTCCCTGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030623.8 |
||
| CDS-3UTR GCA 90 bp | AACAGGGAGAAACGCAACAAGATGATCTTTCCATTTTCAAAAGCTTTCAAGGAAAAATGCTTTTCTTGCTaGTGGCTTGGAAGCAAACTC | + |
|
Preference number: 4 (lower is better) Translates to: NREKRNKMIFPFSKAFKEKCFSC*WLGSKL Trigger: GAGTTTGCTTCCAAGCCAGCAGCAAGAAAAGCATTT...TTCCTTGAAAGCTTTTGAAAATGGAAAGATCATCTTGTTGCGTTTCTCCCTGTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000030623.8 |
||
| CDS-3UTR GCA 90 bp | TCTCTCACTACCAATAGTTTTCACCCATCCATAATCTTAATACATGTTCCTGAATTGGCGCAAAAGATTTaGTTGGTGTTCATGGTAAGC | + |
|
Preference number: 4 (lower is better) Translates to: SLTTNSFHPSIILIHVPELAQKI*LVFMVS Trigger: GCTTACCATGAACACCAAGCAAATCTTTTGCGCCAA...TTCAGGAACATGTATTAAGATTATGGATGGGTGAAAACTATTGGTAGTGAGAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030623.8 |
||
| CDS-3UTR CCA 90 bp | TCTCTCACTACCAATAGTTTTCACCCATCCATAATCTTAATACATGTTCCTGAATACATTGGATTCTTCTaGGCCAGCTTTTCAGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: SLTTNSFHPSIILIHVPEYIGFF*ASFSGR Trigger: TCTTCCTGAAAAGCTGGCCCAGAAGAATCCAATGTA...TTCAGGAACATGTATTAAGATTATGGATGGGTGAAAACTATTGGTAGTGAGAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030623.8 |
||
| CDS-3UTR CCA 90 bp | TCTCTCACTACCAATAGTTTTCACCCATCCATAATCTTAATACATGTTCCTGAACTCCTTTTGATACATTaGATTCTTCTGGGCCAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: SLTTNSFHPSIILIHVPELLLIH*ILLGQL Trigger: AAGCTGGCCCAGAAGAATCCAATGTATCAAAAGGAG...TTCAGGAACATGTATTAAGATTATGGATGGGTGAAAACTATTGGTAGTGAGAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030623.8 |
||
| CDS-3UTR GCA 90 bp | TCTCTCACTACCAATAGTTTTCACCCATCCATAATCTTAATACATGTTCCTGAAATTCATACTCAAATGTaGCATGCTGAGCAAAACGAG | + |
|
Preference number: 4 (lower is better) Translates to: SLTTNSFHPSIILIHVPEIHTQM*HAEQNE Trigger: CTCGTTTTGCTCAGCATGGCACATTTGAGTATGAAT...TTCAGGAACATGTATTAAGATTATGGATGGGTGAAAACTATTGGTAGTGAGAGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030623.8 |
||
| CDS-3UTR GCA 90 bp | AACAGGGAGAAACGCAACAAGATGATCTTTCCATTTTCAAAAGCTTTCAAGGAATCAACTTGTTCCCTTTaGTGTTTTTCCATTTCATCC | + |
|
Preference number: 4 (lower is better) Translates to: NREKRNKMIFPFSKAFKESTCSL*CFSISS Trigger: GGATGAAATGGAAAAACAGCAAAGGGAACAAGTTGA...TTCCTTGAAAGCTTTTGAAAATGGAAAGATCATCTTGTTGCGTTTCTCCCTGTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030623.8 |
||
| CDS-3UTR CCA 90 bp | AACAGGGAGAAACGCAACAAGATGATCTTTCCATTTTCAAAAGCTTTCAAGGAACTTCCAAAAGTTCGTTaGAAACATAAGGAGAGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: NREKRNKMIFPFSKAFKELPKVR*KHKERD Trigger: ATCTCTCTCCTTATGTTTCCAACGAACTTTTGGAAG...TTCCTTGAAAGCTTTTGAAAATGGAAAGATCATCTTGTTGCGTTTCTCCCTGTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030623.8 |
||
| CDS TCA 90 bp | GCTTCGGGCCGCCAGGGCCCGGGCCCATGGGGCCGCGGTTCTGGTTaGGGCCCATGCCCGGCGGCGGAGAGCGGAAGTCGTGAAGGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: ASGRQGPGPWGRGSG*GPCPAAESGSREGR Trigger: GCGGCCTTCACGACTTCCGCTCTCCGCCGCCGGGCATGGGCCTCAACCAGAACCGCGGCCCCATGGGCCCGGGCCCTGGCGGCCCGAAGC 77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030623.8 |
||
| CDS CCA 90 bp | CGGCCCCCACGGGGCTCGCCGCCACCTCGGTGTGGTGGCTTCGGGTaGCCACCAGGAGCGCCCATGCCCGGGCCACCTCCAGGCTTAGGC | + |
|
Preference number: 5 (lower is better) Translates to: RPPRGSPPPRCGGFG*PPGAPMPGPPPGLG Trigger: GCCTAAGCCTGGAGGTGGCCCGGGCATGGGCGCTCCTGGTGGCCACCCGAAGCCACCACACCGAGGTGGCGGCGAGCCCCGTGGGGGCCG 77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030623.8 |
||
| CDS CCA 90 bp | CGCATGATGCTGCCGGCCCCCACGGGGCTCGCCGCCACCTCGGTGTaGTGGCTTCGGGTGGCCACCAGGAGCGCCCATGCCCGGGCCACC | + |
|
Preference number: 5 (lower is better) Translates to: RMMLPAPTGLAATSV*WLRVATRSAHARAT Trigger: GGTGGCCCGGGCATGGGCGCTCCTGGTGGCCACCCGAAGCCACCACACCGAGGTGGCGGCGAGCCCCGTGGGGGCCGGCAGCATCATGCG 77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030623.8 |
||
| CDS CCA 90 bp | ATGATGCTGCCGGCCCCCACGGGGCTCGCCGCCACCTCGGTGTGGTaGCTTCGGGTGGCCACCAGGAGCGCCCATGCCCGGGCCACCTCC | + |
|
Preference number: 5 (lower is better) Translates to: MMLPAPTGLAATSVW*LRVATRSAHARATS Trigger: GGAGGTGGCCCGGGCATGGGCGCTCCTGGTGGCCACCCGAAGCCACCACACCGAGGTGGCGGCGAGCCCCGTGGGGGCCGGCAGCATCAT 76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030623.8 |
||
| CDS-3UTR CAA 90 bp | TTATGGTGGGAGGAAAGCATATTTTTACTATGTAGCCTAAGCAACTATCTCCAGGGGCCGCGGTTCTGGTaGAGGCCCATGCCCGGCGGC | + |
|
Preference number: 5 (lower is better) Translates to: LWWEESIFLLCSLSNYLQGPRFW*RPMPGG Trigger: GCCGCCGGGCATGGGCCTCAACCAGAACCGCGGCCC...CTGGAGATAGTTGCTTAGGCTACATAGTAAAAATATGCTTTCCTCCCACCATAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030623.8 |
||
| CDS CCA 90 bp | CTGCAGCGTGTGTGGCAAATCGAACCCGAAGCTGTCTACCTCTCATaGGAGTATCATCAAGCTCAGCTTTGGCGATTTCAGCCAAGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: LQRVWQIEPEAVYLS*EYHQAQLWRFQPRL Trigger: GAGCCTTGGCTGAAATCGCCAAAGCTGAGCTTGATGATACTCCCATGAGAGGTAGACAGCTTCGGGTTCGATTTGCCACACACGCTGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030623.8 |
||
| CDS-3UTR CAA 90 bp | TCTCTCACTACCAATAGTTTTCACCCATCCATAATCTTAATACATGTTCCTGAACGGAGGCGGGGGCTGTaGATGGGGCGGCTGGTGCGG | + |
|
Preference number: 5 (lower is better) Translates to: SLTTNSFHPSIILIHVPERRRGL*MGRLVR Trigger: CCGCACCAGCCGCCCCATCAACAGCCCCCGCCTCCG...TTCAGGAACATGTATTAAGATTATGGATGGGTGAAAACTATTGGTAGTGAGAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030623.8 |
||
| CDS-3UTR CAA 90 bp | TTATGGTGGGAGGAAAGCATATTTTTACTATGTAGCCTAAGCAACTATCTCCAGGCATCTTGCCGCCTTTaGGACCGCCAGGGCCTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: LWWEESIFLLCSLSNYLQASCRL*DRQGLA Trigger: GGCCAGGCCCTGGCGGTCCAAAAGGCGGCAAGATGC...CTGGAGATAGTTGCTTAGGCTACATAGTAAAAATATGCTTTCCTCCCACCATAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030623.8 |
||
| CDS CCA 90 bp | AAACATAAGGAGAGAGATTTCGAACAGACAGGGCTGCAGCGTGTGTaGCAAATCGAACCCGAAGCTGTCTACCTCTCATGGGAGTATCAT | + |
|
Preference number: 5 (lower is better) Translates to: KHKERDFEQTGLQRV*QIEPEAVYLSWEYH Trigger: ATGATACTCCCATGAGAGGTAGACAGCTTCGGGTTCGATTTGCCACACACGCTGCAGCCCTGTCTGTTCGAAATCTCTCTCCTTATGTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030623.8 |
||
| CDS-3UTR CAA 90 bp | TTATGGTGGGAGGAAAGCATATTTTTACTATGTAGCCTAAGCAACTATCTCCAGTGGAACCACTCATGGTaGCTGGTGGAACTCCAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: LWWEESIFLLCSLSNYLQWNHSW*LVELQD Trigger: ATCCTGGAGTTCCACCAGCAACCATGAGTGGTTCCA...CTGGAGATAGTTGCTTAGGCTACATAGTAAAAATATGCTTTCCTCCCACCATAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030623.8 |
||
| CDS-3UTR CAA 90 bp | TTATGGTGGGAGGAAAGCATATTTTTACTATGTAGCCTAAGCAACTATCTCCAGCGCAAGAGAGACAAGTaGGCTTTAAATCCCTCCGAG | + |
|
Preference number: 5 (lower is better) Translates to: LWWEESIFLLCSLSNYLQRKRDK*ALNPSE Trigger: CTCGGAGGGATTTAAAGCCAACTTGTCTCTCTTGCG...CTGGAGATAGTTGCTTAGGCTACATAGTAAAAATATGCTTTCCTCCCACCATAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030623.8 |
||
| CDS-3UTR CAA 90 bp | TACACACGCTCATGCTTTCCAAGTGAAATACCTAGCCTAATGTGCATAGAAGCATTTCTTGCTGCTGGCTaGGAAGCAAACTCAACAATG | + |
|
Preference number: 5 (lower is better) Translates to: YTRSCFPSEIPSLMCIEAFLAAG*EANSTM Trigger: CATTGTTGAGTTTGCTTCCAAGCCAGCAGCAAGAAA...TGCTTCTATGCACATTAGGCTAGGTATTTCACTTGGAAAGCATGAGCGTGTGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030623.8 |
||
| CDS-3UTR CAA 90 bp | TTATGGTGGGAGGAAAGCATATTTTTACTATGTAGCCTAAGCAACTATCTCCAGACGCCGTTCCTCCTCTaGCCTCAACTGCATTTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: LWWEESIFLLCSLSNYLQTPFLL*PQLHFF Trigger: AAAGAAATGCAGTTGAGGCAAGAGGAGGAACGGCGT...CTGGAGATAGTTGCTTAGGCTACATAGTAAAAATATGCTTTCCTCCCACCATAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030623.8 |
||
| CDS-3UTR CAA 90 bp | AACAGGGAGAAACGCAACAAGATGATCTTTCCATTTTCAAAAGCTTTCAAGGAATCATCAAGCTCAGCTTaGGCGATTTCAGCCAAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: NREKRNKMIFPFSKAFKESSSSA*AISAKA Trigger: AGCCTTGGCTGAAATCGCCAAAGCTGAGCTTGATGA...TTCCTTGAAAGCTTTTGAAAATGGAAAGATCATCTTGTTGCGTTTCTCCCTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030623.8 |
||
| CDS-3UTR CAA 90 bp | TACACACGCTCATGCTTTCCAAGTGAAATACCTAGCCTAATGTGCATAGAAGCAGTAACTTTCTTCTCGTaGGCGTCTCATTTGTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: YTRSCFPSEIPSLMCIEAVTFFS*ASHLFF Trigger: GAAGAACAAATGAGACGCCAACGAGAAGAAAGTTAC...TGCTTCTATGCACATTAGGCTAGGTATTTCACTTGGAAAGCATGAGCGTGTGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030623.8 |
||
| CDS-3UTR CAA 90 bp | AACAGGGAGAAACGCAACAAGATGATCTTTCCATTTTCAAAAGCTTTCAAGGAAGCGTCTCATCAGATCTaGGCGCAAAAGATTTGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: NREKRNKMIFPFSKAFKEASHQI*AQKICL Trigger: CAAGCAAATCTTTTGCGCCAAGATCTGATGAGACGC...TTCCTTGAAAGCTTTTGAAAATGGAAAGATCATCTTGTTGCGTTTCTCCCTGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030623.8 |
||
| CDS-3UTR CAA 90 bp | AACAACAGGGAGAAACGCAACAAGATGATCTTTCCATTTTCAAAAGCTTTCAAGTCGTTGGCGTCTCATTaGTTCTTCCATCTCACGTTG | + |
|
Preference number: 5 (lower is better) Translates to: NNREKRNKMIFPFSKAFKSLASH*FFHLTL Trigger: CAACGTGAGATGGAAGAACAAATGAGACGCCAACGA...CTTGAAAGCTTTTGAAAATGGAAAGATCATCTTGTTGCGTTTCTCCCTGTTGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030623.8 |
||
| CDS-3UTR CAA 90 bp | AACAACAGGGAGAAACGCAACAAGATGATCTTTCCATTTTCAAAAGCTTTCAAGCCGAACCCTTTGCCTTaGTTGATAAAAACTTCTCCG | + |
|
Preference number: 5 (lower is better) Translates to: NNREKRNKMIFPFSKAFKPNPLP*LIKTSP Trigger: CGGAGAAGTTTTTATCAACAAAGGCAAAGGGTTCGG...CTTGAAAGCTTTTGAAAATGGAAAGATCATCTTGTTGCGTTTCTCCCTGTTGTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030623.8 |
||
| CDS-3UTR CAA 90 bp | TACACACGCTCATGCTTTCCAAGTGAAATACCTAGCCTAATGTGCATAGAAGCATGTTTCTCTCTCCTTTaGATACATTGGATTCTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: YTRSCFPSEIPSLMCIEACFSLL*IHWILL Trigger: CAGAAGAATCCAATGTATCAAAAGGAGAGAGAAACA...TGCTTCTATGCACATTAGGCTAGGTATTTCACTTGGAAAGCATGAGCGTGTGTA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030623.8 |
||
| CDS-3UTR CAA 90 bp | AACAGGGAGAAACGCAACAAGATGATCTTTCCATTTTCAAAAGCTTTCAAGGAATTCTTCCATCTCACGTaGGCGAATCATCATCTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: NREKRNKMIFPFSKAFKEFFHLT*ANHHLF Trigger: GAAGAGATGATGATTCGCCAACGTGAGATGGAAGAA...TTCCTTGAAAGCTTTTGAAAATGGAAAGATCATCTTGTTGCGTTTCTCCCTGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030623.8 |
||
| CDS-3UTR CAA 90 bp | TTATGGTGGGAGGAAAGCATATTTTTACTATGTAGCCTAAGCAACTATCTCCAGATGAACCCGAACCCTTaGCCTTTGTTGATAAAAACT | + |
|
Preference number: 5 (lower is better) Translates to: LWWEESIFLLCSLSNYLQMNPNP*PLLIKT Trigger: AGTTTTTATCAACAAAGGCAAAGGGTTCGGGTTCAT...CTGGAGATAGTTGCTTAGGCTACATAGTAAAAATATGCTTTCCTCCCACCATAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000030623.8 |
||
| CDS-3UTR CAA 90 bp | TCTCTCACTACCAATAGTTTTCACCCATCCATAATCTTAATACATGTTCCTGAAGCGCAAAAGATTTGCTaGGTGTTCATGGTAAGCATC | + |
|
Preference number: 5 (lower is better) Translates to: SLTTNSFHPSIILIHVPEAQKIC*VFMVSI Trigger: GATGCTTACCATGAACACCAAGCAAATCTTTTGCGC...TTCAGGAACATGTATTAAGATTATGGATGGGTGAAAACTATTGGTAGTGAGAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030623.8 |
||
| CDS-3UTR CAA 90 bp | TCTCTCACTACCAATAGTTTTCACCCATCCATAATCTTAATACATGTTCCTGAACTTGGCGCAAAAGATTaGCTTGGTGTTCATGGTAAG | + |
|
Preference number: 5 (lower is better) Translates to: SLTTNSFHPSIILIHVPELGAKD*LGVHGK Trigger: CTTACCATGAACACCAAGCAAATCTTTTGCGCCAAG...TTCAGGAACATGTATTAAGATTATGGATGGGTGAAAACTATTGGTAGTGAGAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030623.8 |
||
| CDS-3UTR CAA 90 bp | AACAGGGAGAAACGCAACAAGATGATCTTTCCATTTTCAAAAGCTTTCAAGGAAACGTTTCTGCATTTCTaGACTGTGAAGTTCCTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: NREKRNKMIFPFSKAFKETFLHF*TVKFLH Trigger: ATGGAGGAACTTCACAGTCAAGAAATGCAGAAACGT...TTCCTTGAAAGCTTTTGAAAATGGAAAGATCATCTTGTTGCGTTTCTCCCTGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030623.8 |
||
| CDS-3UTR CAA 90 bp | AACAGGGAGAAACGCAACAAGATGATCTTTCCATTTTCAAAAGCTTTCAAGGAACAAGGACTTCCATCGTaGAGAATATTCATACTCAAA | + |
|
Preference number: 5 (lower is better) Translates to: NREKRNKMIFPFSKAFKEQGLPS*RIFILK Trigger: TTTGAGTATGAATATTCTCAACGATGGAAGTCCTTG...TTCCTTGAAAGCTTTTGAAAATGGAAAGATCATCTTGTTGCGTTTCTCCCTGTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030623.8 |
||
| CDS CCA 72 bp | CCGGCCCCCACGGGGCTCGCCGCCACCTCGGTGTGGTaGCTTCGGGTGGCCACCAGGAGCGCCCATGCCCGG | + |
|
Preference number: 6 (lower is better) Translates to: PAPTGLAATSVW*LRVATRSAHAR Trigger: CCGGGCATGGGCGCTCCTGGTGGCCACCCGAAGCCACCACACCGAGGTGGCGGCGAGCCCCGTGGGGGCCGG 79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030623.8 |
||
| CDS CCA 72 bp | CTGCCGGCCCCCACGGGGCTCGCCGCCACCTCGGTGTaGTGGCTTCGGGTGGCCACCAGGAGCGCCCATGCC | + |
|
Preference number: 6 (lower is better) Translates to: LPAPTGLAATSV*WLRVATRSAHA Trigger: GGCATGGGCGCTCCTGGTGGCCACCCGAAGCCACCACACCGAGGTGGCGGCGAGCCCCGTGGGGGCCGGCAG 78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030623.8 |
||
| CDS CCA 72 bp | CGGGGCTCGCCGCCACCTCGGTGTGGTGGCTTCGGGTaGCCACCAGGAGCGCCCATGCCCGGGCCACCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: RGSPPPRCGGFG*PPGAPMPGPPP Trigger: TGGAGGTGGCCCGGGCATGGGCGCTCCTGGTGGCCACCCGAAGCCACCACACCGAGGTGGCGGCGAGCCCCG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030623.8 |
||
| CDS GCA 72 bp | CTAGGACCCTGTCCACCCACAGGACCCGCACCTCCCTaGCCAAAGCGCTCAGTACGCATGTCGCTTCCCATC | + |
|
Preference number: 6 (lower is better) Translates to: LGPCPPTGPAPP*PKRSVRMSLPI Trigger: GATGGGAAGCGACATGCGTACTGAGCGCTTTGGGCAGGGAGGTGCGGGTCCTGTGGGTGGACAGGGTCCTAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030623.8 |
||
| CDS CCA 72 bp | GCCCAAAGCGCTCAGTACGCATGTCGCTTCCCATCATaGAACCACTCATGGTTGCTGGTGGAACTCCAGGAT | + |
|
Preference number: 6 (lower is better) Translates to: AQSAQYACRFPS*NHSWLLVELQD Trigger: ATCCTGGAGTTCCACCAGCAACCATGAGTGGTTCCATGATGGGAAGCGACATGCGTACTGAGCGCTTTGGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030623.8 |
||
| CDS CCA 72 bp | GAGAGAGATTTCGAACAGACAGGGCTGCAGCGTGTGTaGCAAATCGAACCCGAAGCTGTCTACCTCTCATGG | + |
|
Preference number: 6 (lower is better) Translates to: ERDFEQTGLQRV*QIEPEAVYLSW Trigger: CCATGAGAGGTAGACAGCTTCGGGTTCGATTTGCCACACACGCTGCAGCCCTGTCTGTTCGAAATCTCTCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030623.8 |
||
| CDS GCA 72 bp | GGAAACATAAGGAGAGAGATTTCGAACAGACAGGGCTaGAGCGTGTGTGGCAAATCGAACCCGAAGCTGTCT | + |
|
Preference number: 6 (lower is better) Translates to: GNIRREISNRQG*SVCGKSNPKLS Trigger: AGACAGCTTCGGGTTCGATTTGCCACACACGCTGCAGCCCTGTCTGTTCGAAATCTCTCTCCTTATGTTTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030623.8 |
||
| CDS CCA 72 bp | GTGTGGCAAATCGAACCCGAAGCTGTCTACCTCTCATaGGAGTATCATCAAGCTCAGCTTTGGCGATTTCAG | + |
|
Preference number: 6 (lower is better) Translates to: VWQIEPEAVYLS*EYHQAQLWRFQ Trigger: CTGAAATCGCCAAAGCTGAGCTTGATGATACTCCCATGAGAGGTAGACAGCTTCGGGTTCGATTTGCCACAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030623.8 |
||
| CDS CAA 90 bp | ACCCGAAGCTGTCTACCTCTCATGGGAGTATCATCAAGCTCAGCTTaGGCGATTTCAGCCAAGGCTCTAGATTCAAGCTTAATGAACCCG | + |
|
Preference number: 6 (lower is better) Translates to: TRSCLPLMGVSSSSA*AISAKALDSSLMNP Trigger: CGGGTTCATTAAGCTTGAATCTAGAGCCTTGGCTGAAATCGCCAAAGCTGAGCTTGATGATACTCCCATGAGAGGTAGACAGCTTCGGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030623.8 |
||
| CDS CAA 72 bp | TGTCTACCTCTCATGGGAGTATCATCAAGCTCAGCTTaGGCGATTTCAGCCAAGGCTCTAGATTCAAGCTTA | + |
|
Preference number: 6 (lower is better) Translates to: CLPLMGVSSSSA*AISAKALDSSL Trigger: TAAGCTTGAATCTAGAGCCTTGGCTGAAATCGCCAAAGCTGAGCTTGATGATACTCCCATGAGAGGTAGACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030623.8 |
||
| CDS CAA 72 bp | AAGGCTCTAGATTCAAGCTTAATGAACCCGAACCCTTaGCCTTTGTTGATAAAAACTTCTCCGGGTTCTCCG | + |
|
Preference number: 6 (lower is better) Translates to: KALDSSLMNPNP*PLLIKTSPGSP Trigger: CGGAGAACCCGGAGAAGTTTTTATCAACAAAGGCAAAGGGTTCGGGTTCATTAAGCTTGAATCTAGAGCCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030623.8 |
||
| CDS CAA 90 bp | GCCAAGGCTCTAGATTCAAGCTTAATGAACCCGAACCCTTTGCCTTaGTTGATAAAAACTTCTCCGGGTTCTCCGTATTTAGCAAACAGT | + |
|
Preference number: 6 (lower is better) Translates to: AKALDSSLMNPNPLP*LIKTSPGSPYLANS Trigger: ACTGTTTGCTAAATACGGAGAACCCGGAGAAGTTTTTATCAACAAAGGCAAAGGGTTCGGGTTCATTAAGCTTGAATCTAGAGCCTTGGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030623.8 |
||
| CDS CAA 90 bp | ATTTCAGCCAAGGCTCTAGATTCAAGCTTAATGAACCCGAACCCTTaGCCTTTGTTGATAAAAACTTCTCCGGGTTCTCCGTATTTAGCA | + |
|
Preference number: 6 (lower is better) Translates to: ISAKALDSSLMNPNP*PLLIKTSPGSPYLA Trigger: TGCTAAATACGGAGAACCCGGAGAAGTTTTTATCAACAAAGGCAAAGGGTTCGGGTTCATTAAGCTTGAATCTAGAGCCTTGGCTGAAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030623.8 |
||
| CDS CAA 90 bp | AAGGCTCTAGATTCAAGCTTAATGAACCCGAACCCTTTGCCTTTGTaGATAAAAACTTCTCCGGGTTCTCCGTATTTAGCAAACAGTCTT | + |
|
Preference number: 6 (lower is better) Translates to: KALDSSLMNPNPLPL*IKTSPGSPYLANSL Trigger: AAGACTGTTTGCTAAATACGGAGAACCCGGAGAAGTTTTTATCAACAAAGGCAAAGGGTTCGGGTTCATTAAGCTTGAATCTAGAGCCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030623.8 |
||
| CDS CAA 72 bp | CTAGATTCAAGCTTAATGAACCCGAACCCTTTGCCTTaGTTGATAAAAACTTCTCCGGGTTCTCCGTATTTA | + |
|
Preference number: 6 (lower is better) Translates to: LDSSLMNPNPLP*LIKTSPGSPYL Trigger: TAAATACGGAGAACCCGGAGAAGTTTTTATCAACAAAGGCAAAGGGTTCGGGTTCATTAAGCTTGAATCTAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030623.8 |
||