Pregenerated sensors for SF3B3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000033732Ensembl transcript IDs: ENSMUST00000042012.7
Found 277 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR GCA 90 bp | GTTTTATATATTCAGGAGGGTTCCGAGGGCAGAACTGAGCCACACTaGAATCAGCCTGGCTGCACCTTTGCTTGCCTCCCTTCATCTCTC | + |
Preference number: 1 (lower is better) Translates to: VLYIQEGSEGRTEPH*NQPGCTFACLPSSL Trigger: GAGAGATGAAGGGAGGCAAGCAAAGGTGCAGCCAGGCTGATTGCAGTGTGGCTCAGTTCTGCCCTCGGAACCCTCCTGAATATATAAAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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3UTR TCA 90 bp | TTAAAAACTAGTTTTATATATTCAGGAGGGTTCCGAGGGCAGAACTaGGCCACACTGCAATCAGCCTGGCTGCACCTTTGCTTGCCTCCC | + |
Preference number: 1 (lower is better) Translates to: LKTSFIYSGGFRGQN*ATLQSAWLHLCLPP Trigger: GGGAGGCAAGCAAAGGTGCAGCCAGGCTGATTGCAGTGTGGCTCAGTTCTGCCCTCGGAACCCTCCTGAATATATAAAACTAGTTTTTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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3UTR GCA 90 bp | GGCAGAACTGAGCCACACTGCAATCAGCCTGGCTGCACCTTTGCTTaGCTCCCTTCATCTCTCAAAGCAACATTGTACAAAACTGTATTT | + |
Preference number: 1 (lower is better) Translates to: GRTEPHCNQPGCTFA*LPSSLKATLYKTVF Trigger: AAATACAGTTTTGTACAATGTTGCTTTGAGAGATGAAGGGAGGCAAGCAAAGGTGCAGCCAGGCTGATTGCAGTGTGGCTCAGTTCTGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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3UTR TCA 90 bp | ACTTCAGTGTCAACTGTAGGGAACCAGTCATTCAAAGGGGAGAGTTaGGGGTGCAGAGCTACTGGCTTTAACAATGCAGTCTTAAATACC | + |
Preference number: 1 (lower is better) Translates to: TSVSTVGNQSFKGES*GCRATGFNNAVLNT Trigger: GGTATTTAAGACTGCATTGTTAAAGCCAGTAGCTCTGCACCCTCAACTCTCCCCTTTGAATGACTGGTTCCCTACAGTTGACACTGAAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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3UTR TCA 90 bp | CTCCACAGCAAAGAACCAAGACACACTAAGAAAACACTAGAGCCATaGTGTCCACACAAGAGCAAAGAAGTAAAAGATCCAGTTATTGTT | + |
Preference number: 1 (lower is better) Translates to: LHSKEPRHTKKTLEP*CPHKSKEVKDPVIV Trigger: AACAATAACTGGATCTTTTACTTCTTTGCTCTTGTGTGGACATCATGGCTCTAGTGTTTTCTTAGTGTGTCTTGGTTCTTTGCTGTGGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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3UTR CAA 90 bp | CCGAGGGCAGAACTGAGCCACACTGCAATCAGCCTGGCTGCACCTTaGCTTGCCTCCCTTCATCTCTCAAAGCAACATTGTACAAAACTG | + |
Preference number: 2 (lower is better) Translates to: PRAELSHTAISLAAP*LASLHLSKQHCTKL Trigger: CAGTTTTGTACAATGTTGCTTTGAGAGATGAAGGGAGGCAAGCAAAGGTGCAGCCAGGCTGATTGCAGTGTGGCTCAGTTCTGCCCTCGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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3UTR-3UTR CCA 90 bp | CCGAAGCTCAGGGCCACACACTATGTTCAAGGAGCAGACTTCAGTGTCAACTGTGCAAAAGCCAGACACTaGCAATGGGAACAAAAGAGG | + |
Preference number: 2 (lower is better) Translates to: PKLRATHYVQGADFSVNCAKARH*QWEQKR Trigger: CCTCTTTTGTTCCCATTGCCAGTGTCTGGCTTTTGC...ACAGTTGACACTGAAGTCTGCTCCTTGAACATAGTGTGTGGCCCTGAGCTTCGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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3UTR-3UTR CCA 90 bp | TTGGGAATAAGGAAAACTGTGTTCCACACCGAAGCTCAGGGCCACACACTATGTATCACTTCTGCTGTGTaGCAAAAGCCAGACACTGGC | + |
Preference number: 2 (lower is better) Translates to: LGIRKTVFHTEAQGHTLCITSAV*QKPDTG Trigger: GCCAGTGTCTGGCTTTTGCCACACAGCAGAAGTGAT...ACATAGTGTGTGGCCCTGAGCTTCGGTGTGGAACACAGTTTTCCTTATTCCCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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3UTR-3UTR TCA 90 bp | ATTTACATGGTCAGTGAACTCATGTTCTATCTCCACAGCAAAGAACCAAGACACTTCAAAGGGGAGAGTTaGGGGTGCAGAGCTACTGGC | + |
Preference number: 2 (lower is better) Translates to: IYMVSELMFYLHSKEPRHFKGES*GCRATG Trigger: GCCAGTAGCTCTGCACCCTCAACTCTCCCCTTTGAA...GTGTCTTGGTTCTTTGCTGTGGAGATAGAACATGAGTTCACTGACCATGTAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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3UTR-3UTR GCA 90 bp | ATTTACATGGTCAGTGAACTCATGTTCTATCTCCACAGCAAAGAACCAAGACACGCCTGGCTGCACCTTTaGTTGCCTCCCTTCATCTCT | + |
Preference number: 2 (lower is better) Translates to: IYMVSELMFYLHSKEPRHAWLHL*LPPFIS Trigger: AGAGATGAAGGGAGGCAAGCAAAGGTGCAGCCAGGC...GTGTCTTGGTTCTTTGCTGTGGAGATAGAACATGAGTTCACTGACCATGTAAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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3UTR-3UTR CCA 90 bp | AGCAAAGAAGTAAAAGATCCAGTTATTGTTCTAATTAGGCCTCAAGCCTTTCTCGCCAGACACTGGCAATaGGAACAAAAGAGGGGCTCT | + |
Preference number: 2 (lower is better) Translates to: SKEVKDPVIVLIRPQAFLARHWQ*EQKRGS Trigger: AGAGCCCCTCTTTTGTTCCCATTGCCAGTGTCTGGC...GAGAAAGGCTTGAGGCCTAATTAGAACAATAACTGGATCTTTTACTTCTTTGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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3UTR-3UTR GCA 90 bp | GGGAAAGGGAAAACACCCTCTTTAATATCCATGAATAGTGGGGTTACATTTACAATACCACATCACTTCTaGTGTGTGGCAAAAGCCAGA | + |
Preference number: 2 (lower is better) Translates to: GKGKTPSLISMNSGVTFTIPHHF*CVAKAR Trigger: TCTGGCTTTTGCCACACAGCAGAAGTGATGTGGTAT...TGTAAATGTAACCCCACTATTCATGGATATTAAAGAGGGTGTTTTCCCTTTCCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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3UTR-3UTR CAA 90 bp | CGAAGCTCAGGGCCACACACTATGTTCAAGGAGCAGACTTCAGTGTCAACTGTAATTCAAAGGGGAGAGTaGAGGGTGCAGAGCTACTGG | + |
Preference number: 3 (lower is better) Translates to: RSSGPHTMFKEQTSVSTVIQRGE*RVQSYW Trigger: CCAGTAGCTCTGCACCCTCAACTCTCCCCTTTGAAT...TACAGTTGACACTGAAGTCTGCTCCTTGAACATAGTGTGTGGCCCTGAGCTTCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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3UTR TCA 72 bp | AGTTTTATATATTCAGGAGGGTTCCGAGGGCAGAACTaGGCCACACTGCAATCAGCCTGGCTGCACCTTTGC | + |
Preference number: 3 (lower is better) Translates to: SFIYSGGFRGQN*ATLQSAWLHLC Trigger: GCAAAGGTGCAGCCAGGCTGATTGCAGTGTGGCTCAGTTCTGCCCTCGGAACCCTCCTGAATATATAAAACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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3UTR GCA 72 bp | GAGCCACACTGCAATCAGCCTGGCTGCACCTTTGCTTaGCTCCCTTCATCTCTCAAAGCAACATTGTACAAA | + |
Preference number: 3 (lower is better) Translates to: EPHCNQPGCTFA*LPSSLKATLYK Trigger: TTTGTACAATGTTGCTTTGAGAGATGAAGGGAGGCAAGCAAAGGTGCAGCCAGGCTGATTGCAGTGTGGCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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3UTR TCA 72 bp | TCAACTGTAGGGAACCAGTCATTCAAAGGGGAGAGTTaGGGGTGCAGAGCTACTGGCTTTAACAATGCAGTC | + |
Preference number: 3 (lower is better) Translates to: STVGNQSFKGES*GCRATGFNNAV Trigger: GACTGCATTGTTAAAGCCAGTAGCTCTGCACCCTCAACTCTCCCCTTTGAATGACTGGTTCCCTACAGTTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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3UTR CCA 72 bp | CAATGCAGTCTTAAATACCACATCACTTCTGCTGTGTaGCAAAAGCCAGACACTGGCAATGGGAACAAAAGA | + |
Preference number: 3 (lower is better) Translates to: QCSLKYHITSAV*QKPDTGNGNKR Trigger: TCTTTTGTTCCCATTGCCAGTGTCTGGCTTTTGCCACACAGCAGAAGTGATGTGGTATTTAAGACTGCATTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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3UTR-3UTR CAA 90 bp | GGGAAAGGGAAAACACCCTCTTTAATATCCATGAATAGTGGGGTTACATTTACAAATGCAGGGGTGGCTTaGGGAATAAGGAAAACTGTG | + |
Preference number: 3 (lower is better) Translates to: GKGKTPSLISMNSGVTFTNAGVA*GIRKTV Trigger: CACAGTTTTCCTTATTCCCAAAGCCACCCCTGCATT...TGTAAATGTAACCCCACTATTCATGGATATTAAAGAGGGTGTTTTCCCTTTCCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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3UTR TCA 72 bp | AAAGAACCAAGACACACTAAGAAAACACTAGAGCCATaGTGTCCACACAAGAGCAAAGAAGTAAAAGATCCA | + |
Preference number: 3 (lower is better) Translates to: KEPRHTKKTLEP*CPHKSKEVKDP Trigger: TGGATCTTTTACTTCTTTGCTCTTGTGTGGACATCATGGCTCTAGTGTTTTCTTAGTGTGTCTTGGTTCTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS-3UTR GCA 90 bp | GAGCCACACTGCAATCAGCCTGGCTGCACCTTTGCTTGCCTCCCTTCATCTCTCCTGCTGGGTATTGGCTaGTGCTTCCCCTGTTGGATC | + |
Preference number: 4 (lower is better) Translates to: EPHCNQPGCTFACLPSSLLLGIG*CFPCWI Trigger: GATCCAACAGGGGAAGCAGCAGCCAATACCCAGCAG...GAGAGATGAAGGGAGGCAAGCAAAGGTGCAGCCAGGCTGATTGCAGTGTGGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS-3UTR CCA 90 bp | GCCACACTGCAATCAGCCTGGCTGCACCTTTGCTTGCCTCCCTTCATCTCTCAAGAACGAAAGCTCAGGTaGTCCCGTCCACAAAGAGGG | + |
Preference number: 4 (lower is better) Translates to: ATLQSAWLHLCLPPFISQERKLR*SRPQRG Trigger: CCCTCTTTGTGGACGGGACCACCTGAGCTTTCGTTC...TTGAGAGATGAAGGGAGGCAAGCAAAGGTGCAGCCAGGCTGATTGCAGTGTGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS-3UTR GCA 90 bp | CACTGCAATCAGCCTGGCTGCACCTTTGCTTGCCTCCCTTCATCTCTCAAAGCATGCTGCTGCCATTTCTaGAGCCAACTCCCGCTCATC | + |
Preference number: 4 (lower is better) Translates to: HCNQPGCTFACLPSSLKACCCHF*SQLPLI Trigger: GATGAGCGGGAGTTGGCTGCAGAAATGGCAGCAGCA...TGCTTTGAGAGATGAAGGGAGGCAAGCAAAGGTGCAGCCAGGCTGATTGCAGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS-3UTR CCA 90 bp | CCACACCGAAGCTCAGGGCCACACACTATGTTCAAGGAGCAGACTTCAGTGTCACTGTCCAGACAGCATTaGGGTTACCAGGGAGCTCAG | + |
Preference number: 4 (lower is better) Translates to: PHRSSGPHTMFKEQTSVSLSRQH*GYQGAQ Trigger: CTGAGCTCCCTGGTAACCCCAATGCTGTCTGGACAG...TGACACTGAAGTCTGCTCCTTGAACATAGTGTGTGGCCCTGAGCTTCGGTGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS-3UTR CCA 90 bp | GCCACACTGCAATCAGCCTGGCTGCACCTTTGCTTGCCTCCCTTCATCTCTCAAAAGTGTTGGTGGAGATaGCAACAATGCCCTCGGGAC | + |
Preference number: 4 (lower is better) Translates to: ATLQSAWLHLCLPPFISQKCWWR*QQCPRD Trigger: GTCCCGAGGGCATTGTTGCCATCTCCACCAACACTT...TTGAGAGATGAAGGGAGGCAAGCAAAGGTGCAGCCAGGCTGATTGCAGTGTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS-3UTR TCA 90 bp | CAGCCTGGCTGCACCTTTGCTTGCCTCCCTTCATCTCTCAAAGCAACATTGTACAGAGTAGCTCAGCCATaGGCGACTGGACATAGCCAG | + |
Preference number: 4 (lower is better) Translates to: QPGCTFACLPSSLKATLYRVAQP*ATGHSQ Trigger: CTGGCTATGTCCAGTCGCTCATGGCTGAGCTACTCT...GTACAATGTTGCTTTGAGAGATGAAGGGAGGCAAGCAAAGGTGCAGCCAGGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS-3UTR TCA 90 bp | GCCACACTGCAATCAGCCTGGCTGCACCTTTGCTTGCCTCCCTTCATCTCTCAATACTCTCAGGGTGGATaGCAAACTTCCTGGGTGTGT | + |
Preference number: 4 (lower is better) Translates to: ATLQSAWLHLCLPPFISQYSQGG*QTSWVC Trigger: ACACACCCAGGAAGTTTGTCATCCACCCTGAGAGTA...TTGAGAGATGAAGGGAGGCAAGCAAAGGTGCAGCCAGGCTGATTGCAGTGTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS-3UTR TCA 90 bp | GAGCCACACTGCAATCAGCCTGGCTGCACCTTTGCTTGCCTCCCTTCATCTCTCGACACAATTACCCTGTaGCCAATTGTCTGGATCCCA | + |
Preference number: 4 (lower is better) Translates to: EPHCNQPGCTFACLPSSLDTITL*PIVWIP Trigger: TGGGATCCAGACAATTGGTCACAGGGTAATTGTGTC...GAGAGATGAAGGGAGGCAAGCAAAGGTGCAGCCAGGCTGATTGCAGTGTGGCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS-3UTR GCA 90 bp | CCACACCGAAGCTCAGGGCCACACACTATGTTCAAGGAGCAGACTTCAGTGTCAACAAGGTTGGAGTGGTaGCCAAGAAGCCAGAGTCAG | + |
Preference number: 4 (lower is better) Translates to: PHRSSGPHTMFKEQTSVSTRLEW*PRSQSQ Trigger: CTGACTCTGGCTTCTTGGGCACCACTCCAACCTTGT...TGACACTGAAGTCTGCTCCTTGAACATAGTGTGTGGCCCTGAGCTTCGGTGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS-3UTR GCA 90 bp | TTGGGAATAAGGAAAACTGTGTTCCACACCGAAGCTCAGGGCCACACACTATGTACAGCCTCCTGGCCTTaGATCCGGACCCGGAAGAGT | + |
Preference number: 4 (lower is better) Translates to: LGIRKTVFHTEAQGHTLCTASWP*IRTRKS Trigger: ACTCTTCCGGGTCCGGATGCAAGGCCAGGAGGCTGT...ACATAGTGTGTGGCCCTGAGCTTCGGTGTGGAACACAGTTTTCCTTATTCCCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS-3UTR GCA 90 bp | GCCACACTGCAATCAGCCTGGCTGCACCTTTGCTTGCCTCCCTTCATCTCTCAAAAGGCTGCCTCGTTTTaGTCCAACTGGACAAGGTCT | + |
Preference number: 4 (lower is better) Translates to: ATLQSAWLHLCLPPFISQKAASF*SNWTRS Trigger: AGACCTTGTCCAGTTGGAGCAAAACGAGGCAGCCTT...TTGAGAGATGAAGGGAGGCAAGCAAAGGTGCAGCCAGGCTGATTGCAGTGTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS-3UTR GCA 90 bp | GCCACACTGCAATCAGCCTGGCTGCACCTTTGCTTGCCTCCCTTCATCTCTCAAGTTGCCAAACTTGTCTaGCCCAGCCACAGTGTCATA | + |
Preference number: 4 (lower is better) Translates to: ATLQSAWLHLCLPPFISQVAKLV*PSHSVI Trigger: TATGACACTGTGGCTGGGGCAGACAAGTTTGGCAAC...TTGAGAGATGAAGGGAGGCAAGCAAAGGTGCAGCCAGGCTGATTGCAGTGTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS-3UTR GCA 90 bp | GCAGGGGTGGCTTTGGGAATAAGGAAAACTGTGTTCCACACCGAAGCTCAGGGCTGCTCAGACCGCAGGTaGATTTCAACATGCTGGAAG | + |
Preference number: 4 (lower is better) Translates to: AGVALGIRKTVFHTEAQGCSDRR*ISTCWK Trigger: CTTCCAGCATGTTGAAATGCACCTGCGGTCTGAGCA...GCCCTGAGCTTCGGTGTGGAACACAGTTTTCCTTATTCCCAAAGCCACCCCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS-3UTR CCA 90 bp | GCCACACTGCAATCAGCCTGGCTGCACCTTTGCTTGCCTCCCTTCATCTCTCAACCAGAGAAGTTGCCATaGATGGCAAAGCTGATGCCA | + |
Preference number: 4 (lower is better) Translates to: ATLQSAWLHLCLPPFISQPEKLP*MAKLMP Trigger: TGGCATCAGCTTTGCCATCCATGGCAACTTCTCTGG...TTGAGAGATGAAGGGAGGCAAGCAAAGGTGCAGCCAGGCTGATTGCAGTGTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS-3UTR CCA 90 bp | GGGAATAAGGAAAACTGTGTTCCACACCGAAGCTCAGGGCCACACACTATGTTCCCTGGAATGGGGCAATaGCAGCAGGGACCTCTTCCA | + |
Preference number: 4 (lower is better) Translates to: GNKENCVPHRSSGPHTMFPGMGQ*QQGPLP Trigger: TGGAAGAGGTCCCTGCTGCCATTGCCCCATTCCAGG...GAACATAGTGTGTGGCCCTGAGCTTCGGTGTGGAACACAGTTTTCCTTATTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS-3UTR CCA 90 bp | CCGAAGCTCAGGGCCACACACTATGTTCAAGGAGCAGACTTCAGTGTCAACTGTATCAGTACCCTCCCCTaGAATGGGGCAATGGCAGCA | + |
Preference number: 4 (lower is better) Translates to: PKLRATHYVQGADFSVNCISTLP*NGAMAA Trigger: TGCTGCCATTGCCCCATTCCAGGGGAGGGTACTGAT...ACAGTTGACACTGAAGTCTGCTCCTTGAACATAGTGTGTGGCCCTGAGCTTCGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS-3UTR TCA 90 bp | ACATCACTTCTGCTGTGTGGCAAAAGCCAGACACTGGCAATGGGAACAAAAGAGGACCTCTGCCTTCTGTaGAGCCCCATTGAGCAAGCC | + |
Preference number: 4 (lower is better) Translates to: TSLLLCGKSQTLAMGTKEDLCLL*SPIEQA Trigger: GGCTTGCTCAATGGGGCTTCACAGAAGGCAGAGGTC...CTCTTTTGTTCCCATTGCCAGTGTCTGGCTTTTGCCACACAGCAGAAGTGATGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS-3UTR GCA 90 bp | CCACACCGAAGCTCAGGGCCACACACTATGTTCAAGGAGCAGACTTCAGTGTCACTGGGTATTGGCTGCTaGTTCCCCTGTTGGATCATT | + |
Preference number: 4 (lower is better) Translates to: PHRSSGPHTMFKEQTSVSLGIGC*FPCWII Trigger: AATGATCCAACAGGGGAAGCAGCAGCCAATACCCAG...TGACACTGAAGTCTGCTCCTTGAACATAGTGTGTGGCCCTGAGCTTCGGTGTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS-3UTR CCA 90 bp | GCAGGGGTGGCTTTGGGAATAAGGAAAACTGTGTTCCACACCGAAGCTCAGGGCAGAAGAACATGGACTTaGTCTTATGGGTGGCAGAGC | + |
Preference number: 4 (lower is better) Translates to: AGVALGIRKTVFHTEAQGRRTWT*SYGWQS Trigger: GCTCTGCCACCCATAAGACCAAGTCCATGTTCTTCT...GCCCTGAGCTTCGGTGTGGAACACAGTTTTCCTTATTCCCAAAGCCACCCCTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS-3UTR TCA 90 bp | GCCACACTGCAATCAGCCTGGCTGCACCTTTGCTTGCCTCCCTTCATCTCTCAACCTAAACGCCATAAGTaGCCGGATAACACCAAATAC | + |
Preference number: 4 (lower is better) Translates to: ATLQSAWLHLCLPPFISQPKRHK*PDNTKY Trigger: GTATTTGGTGTTATCCGGTCACTTATGGCGTTTAGG...TTGAGAGATGAAGGGAGGCAAGCAAAGGTGCAGCCAGGCTGATTGCAGTGTGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS-3UTR TCA 90 bp | CCACACCGAAGCTCAGGGCCACACACTATGTTCAAGGAGCAGACTTCAGTGTCATTGAGTGGTCTCGGCTaGAAGAAGAATGTGTCTCCT | + |
Preference number: 4 (lower is better) Translates to: PHRSSGPHTMFKEQTSVSLSGLG*KKNVSP Trigger: AGGAGACACATTCTTCTTTCAGCCGAGACCACTCAA...TGACACTGAAGTCTGCTCCTTGAACATAGTGTGTGGCCCTGAGCTTCGGTGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS-3UTR TCA 90 bp | ACATCACTTCTGCTGTGTGGCAAAAGCCAGACACTGGCAATGGGAACAAAAGAGGCACACCACATCTGCTaGCATCTCTTTCCGCTCCGT | + |
Preference number: 4 (lower is better) Translates to: TSLLLCGKSQTLAMGTKEAHHIC*HLFPLR Trigger: ACGGAGCGGAAAGAGATGTCAGCAGATGTGGTGTGC...CTCTTTTGTTCCCATTGCCAGTGTCTGGCTTTTGCCACACAGCAGAAGTGATGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS-3UTR GCA 90 bp | AATGCAGTCTTAAATACCACATCACTTCTGCTGTGTGGCAAAAGCCAGACACTGAGGCCCACTGCCCATTaGCAGCCTTGGGAGCTCCAA | + |
Preference number: 4 (lower is better) Translates to: NAVLNTTSLLLCGKSQTLRPTAH*QPWELQ Trigger: TTGGAGCTCCCAAGGCTGGCAATGGGCAGTGGGCCT...CAGTGTCTGGCTTTTGCCACACAGCAGAAGTGATGTGGTATTTAAGACTGCATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS-3UTR CCA 90 bp | AATACCACATCACTTCTGCTGTGTGGCAAAAGCCAGACACTGGCAATGGGAACAAGAGTGTTCGCTTTGTaGGCCTCCAGGGGAGAGGAA | + |
Preference number: 4 (lower is better) Translates to: NTTSLLLCGKSQTLAMGTRVFAL*ASRGEE Trigger: TTCCTCTCCCCTGGAGGCCCACAAAGCGAACACTCT...TGTTCCCATTGCCAGTGTCTGGCTTTTGCCACACAGCAGAAGTGATGTGGTATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS-3UTR CCA 90 bp | AATACCACATCACTTCTGCTGTGTGGCAAAAGCCAGACACTGGCAATGGGAACACCGTCTCCTGGGAATTaGACATCGGATGTCTGGCTG | + |
Preference number: 4 (lower is better) Translates to: NTTSLLLCGKSQTLAMGTPSPGN*TSDVWL Trigger: CAGCCAGACATCCGATGTCCAATTCCCAGGAGACGG...TGTTCCCATTGCCAGTGTCTGGCTTTTGCCACACAGCAGAAGTGATGTGGTATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS-3UTR CCA 90 bp | CCGAAGCTCAGGGCCACACACTATGTTCAAGGAGCAGACTTCAGTGTCAACTGTGTGGGGTGTCTTCATTaGCCAAATCAGCTATCTGGC | + |
Preference number: 4 (lower is better) Translates to: PKLRATHYVQGADFSVNCVGCLH*PNQLSG Trigger: GCCAGATAGCTGATTTGGCCAATGAAGACACCCCAC...ACAGTTGACACTGAAGTCTGCTCCTTGAACATAGTGTGTGGCCCTGAGCTTCGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS-3UTR CCA 90 bp | AAACTAGTTTTATATATTCAGGAGGGTTCCGAGGGCAGAACTGAGCCACACTGCCTTGGACACTTCAGGTaGGGTTCGGTCCAGCTCCTC | + |
Preference number: 4 (lower is better) Translates to: KLVLYIQEGSEGRTEPHCLGHFR*GSVQLL Trigger: GAGGAGCTGGACCGAACCCCACCTGAAGTGTCCAAG...GCAGTGTGGCTCAGTTCTGCCCTCGGAACCCTCCTGAATATATAAAACTAGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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3UTR CAA 72 bp | GAACTGAGCCACACTGCAATCAGCCTGGCTGCACCTTaGCTTGCCTCCCTTCATCTCTCAAAGCAACATTGT | + |
Preference number: 4 (lower is better) Translates to: ELSHTAISLAAP*LASLHLSKQHC Trigger: ACAATGTTGCTTTGAGAGATGAAGGGAGGCAAGCAAAGGTGCAGCCAGGCTGATTGCAGTGTGGCTCAGTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS-3UTR TCA 90 bp | CCGAAGCTCAGGGCCACACACTATGTTCAAGGAGCAGACTTCAGTGTCAACTGTAATGGGAAGGCTACTTaGTTGAAGACAGCACCAAGC | + |
Preference number: 4 (lower is better) Translates to: PKLRATHYVQGADFSVNCNGKAT*LKTAPS Trigger: GCTTGGTGCTGTCTTCAATCAAGTAGCCTTCCCATT...ACAGTTGACACTGAAGTCTGCTCCTTGAACATAGTGTGTGGCCCTGAGCTTCGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS-3UTR GCA 90 bp | CCACACCGAAGCTCAGGGCCACACACTATGTTCAAGGAGCAGACTTCAGTGTCAGGCGACATCCGCTTTTaGCAAAAGTTTCTTGGTGAA | + |
Preference number: 4 (lower is better) Translates to: PHRSSGPHTMFKEQTSVSGDIRF*QKFLGE Trigger: TTCACCAAGAAACTTTTGGCAAAAGCGGATGTCGCC...TGACACTGAAGTCTGCTCCTTGAACATAGTGTGTGGCCCTGAGCTTCGGTGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS-3UTR GCA 90 bp | CAATGCAGGGGTGGCTTTGGGAATAAGGAAAACTGTGTTCCACACCGAAGCTCAGACACCTCAAGTCCATaGCTTAAGACTCTCAGGGAG | + |
Preference number: 4 (lower is better) Translates to: QCRGGFGNKENCVPHRSSDTSSP*LKTLRE Trigger: CTCCCTGAGAGTCTTAAGGCATGGACTTGAGGTGTC...TGAGCTTCGGTGTGGAACACAGTTTTCCTTATTCCCAAAGCCACCCCTGCATTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS-3UTR GCA 90 bp | TTGGGAATAAGGAAAACTGTGTTCCACACCGAAGCTCAGGGCCACACACTATGTCGTTGGCCAGACTCATaGACACCACATCTGCTGACA | + |
Preference number: 4 (lower is better) Translates to: LGIRKTVFHTEAQGHTLCRWPDS*TPHLLT Trigger: TGTCAGCAGATGTGGTGTGCATGAGTCTGGCCAACG...ACATAGTGTGTGGCCCTGAGCTTCGGTGTGGAACACAGTTTTCCTTATTCCCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS-3UTR GCA 90 bp | GAAATTACACAATGCAGGGGTGGCTTTGGGAATAAGGAAAACTGTGTTCCACACATCACAGAGGCCCACTaGCCATTGCCAGCCTTGGGA | + |
Preference number: 4 (lower is better) Translates to: EITQCRGGFGNKENCVPHITEAH*PLPALG Trigger: TCCCAAGGCTGGCAATGGGCAGTGGGCCTCTGTGAT...GTGTGGAACACAGTTTTCCTTATTCCCAAAGCCACCCCTGCATTGTGTAATTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS-3UTR CCA 90 bp | AATACCACATCACTTCTGCTGTGTGGCAAAAGCCAGACACTGGCAATGGGAACATGCTGCTTCCCCTGTTaGATCATTGTCTGCCTCCTC | + |
Preference number: 4 (lower is better) Translates to: NTTSLLLCGKSQTLAMGTCCFPC*IIVCLL Trigger: GAGGAGGCAGACAATGATCCAACAGGGGAAGCAGCA...TGTTCCCATTGCCAGTGTCTGGCTTTTGCCACACAGCAGAAGTGATGTGGTATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS-3UTR CCA 90 bp | GCAGGGGTGGCTTTGGGAATAAGGAAAACTGTGTTCCACACCGAAGCTCAGGGCATGGACTTGGTCTTATaGGTGGCAGAGCAAACAAAA | + |
Preference number: 4 (lower is better) Translates to: AGVALGIRKTVFHTEAQGMDLVL*VAEQTK Trigger: TTTTGTTTGCTCTGCCACCCATAAGACCAAGTCCAT...GCCCTGAGCTTCGGTGTGGAACACAGTTTTCCTTATTCCCAAAGCCACCCCTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS-3UTR CCA 90 bp | GGGAATAAGGAAAACTGTGTTCCACACCGAAGCTCAGGGCCACACACTATGTTCGGCTACATACAGCTGTaGGGTGTCTTCATTGGCCAA | + |
Preference number: 4 (lower is better) Translates to: GNKENCVPHRSSGPHTMFGYIQL*GVFIGQ Trigger: TTGGCCAATGAAGACACCCCACAGCTGTATGTAGCC...GAACATAGTGTGTGGCCCTGAGCTTCGGTGTGGAACACAGTTTTCCTTATTCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS-3UTR TCA 90 bp | CCAGTTATTGTTCTAATTAGGCCTCAAGCCTTTCTCCAGAATTATCACTCCCAGCATGGATGGCAAAGCTaGTGCCAGTGGCCCGCTGTA | + |
Preference number: 4 (lower is better) Translates to: PVIVLIRPQAFLQNYHSQHGWQS*CQWPAV Trigger: TACAGCGGGCCACTGGCATCAGCTTTGCCATCCATG...CTGGGAGTGATAATTCTGGAGAAAGGCTTGAGGCCTAATTAGAACAATAACTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS-3UTR TCA 90 bp | CGAAGCTCAGGGCCACACACTATGTTCAAGGAGCAGACTTCAGTGTCAACTGTAGGAAGGCTACTTGATTaGAGACAGCACCAAGCTTCT | + |
Preference number: 4 (lower is better) Translates to: RSSGPHTMFKEQTSVSTVGRLLD*RQHQAS Trigger: AGAAGCTTGGTGCTGTCTTCAATCAAGTAGCCTTCC...TACAGTTGACACTGAAGTCTGCTCCTTGAACATAGTGTGTGGCCCTGAGCTTCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS-3UTR TCA 90 bp | AAACTAGTTTTATATATTCAGGAGGGTTCCGAGGGCAGAACTGAGCCACACTGCATAGACAAGGGACTCTaGGCCTCCAGGGATCAGTGT | + |
Preference number: 4 (lower is better) Translates to: KLVLYIQEGSEGRTEPHCIDKGL*ASRDQC Trigger: ACACTGATCCCTGGAGGCTCAGAGTCCCTTGTCTAT...GCAGTGTGGCTCAGTTCTGCCCTCGGAACCCTCCTGAATATATAAAACTAGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS-3UTR GCA 90 bp | CGAAGCTCAGGGCCACACACTATGTTCAAGGAGCAGACTTCAGTGTCAACTGTATCCACTGGAGTCTTGTaGAGAAACTCCAACTTCTCC | + |
Preference number: 4 (lower is better) Translates to: RSSGPHTMFKEQTSVSTVSTGVL*RNSNFS Trigger: GGAGAAGTTGGAGTTTCTGCACAAGACTCCAGTGGA...TACAGTTGACACTGAAGTCTGCTCCTTGAACATAGTGTGTGGCCCTGAGCTTCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS-3UTR GCA 90 bp | CGAAGCTCAGGGCCACACACTATGTTCAAGGAGCAGACTTCAGTGTCAACTGTATCAGAGACGTTCTTCTaGTTGTTGGGTTCCATGGAG | + |
Preference number: 4 (lower is better) Translates to: RSSGPHTMFKEQTSVSTVSETFF*LLGSME Trigger: CTCCATGGAACCCAACAAGCAGAAGAACGTCTCTGA...TACAGTTGACACTGAAGTCTGCTCCTTGAACATAGTGTGTGGCCCTGAGCTTCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS-3UTR CCA 90 bp | CCGAAGCTCAGGGCCACACACTATGTTCAAGGAGCAGACTTCAGTGTCAACTGTCTTCTTCTAGAGGCATaGCAGACGAAAACTCAGGTT | + |
Preference number: 4 (lower is better) Translates to: PKLRATHYVQGADFSVNCLLLEA*QTKTQV Trigger: AACCTGAGTTTTCGTCTGCCATGCCTCTAGAAGAAG...ACAGTTGACACTGAAGTCTGCTCCTTGAACATAGTGTGTGGCCCTGAGCTTCGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS-3UTR CCA 90 bp | CCACACCGAAGCTCAGGGCCACACACTATGTTCAAGGAGCAGACTTCAGTGTCAAAATCCTCAAAGTGTTaGTGGAGATGGCAACAATGC | + |
Preference number: 4 (lower is better) Translates to: PHRSSGPHTMFKEQTSVSKSSKC*WRWQQC Trigger: GCATTGTTGCCATCTCCACCAACACTTTGAGGATTT...TGACACTGAAGTCTGCTCCTTGAACATAGTGTGTGGCCCTGAGCTTCGGTGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS-3UTR TCA 90 bp | ACATCACTTCTGCTGTGTGGCAAAAGCCAGACACTGGCAATGGGAACAAAAGAGGATAACAATCCGGCCTaGGTCACTGCCAACTACAAT | + |
Preference number: 4 (lower is better) Translates to: TSLLLCGKSQTLAMGTKEDNNPA*VTANYN Trigger: ATTGTAGTTGGCAGTGACTCAGGCCGGATTGTTATC...CTCTTTTGTTCCCATTGCCAGTGTCTGGCTTTTGCCACACAGCAGAAGTGATGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS-3UTR TCA 90 bp | AAACTAGTTTTATATATTCAGGAGGGTTCCGAGGGCAGAACTGAGCCACACTGCTCCACTTGGACCATCTaGCCCTCCAGGAACTGTAAT | + |
Preference number: 4 (lower is better) Translates to: KLVLYIQEGSEGRTEPHCSTWTI*PSRNCN Trigger: ATTACAGTTCCTGGAGGGTCAGATGGTCCAAGTGGA...GCAGTGTGGCTCAGTTCTGCCCTCGGAACCCTCCTGAATATATAAAACTAGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS-3UTR TCA 90 bp | CAATGCAGGGGTGGCTTTGGGAATAAGGAAAACTGTGTTCCACACCGAAGCTCACAGTATCAAAATACTTaGGGCGGATCTCGGTTACCA | + |
Preference number: 4 (lower is better) Translates to: QCRGGFGNKENCVPHRSSQYQNT*GGSRLP Trigger: TGGTAACCGAGATCCGCCTCAAGTATTTTGATACTG...TGAGCTTCGGTGTGGAACACAGTTTTCCTTATTCCCAAAGCCACCCCTGCATTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS-3UTR GCA 90 bp | CAATGCAGGGGTGGCTTTGGGAATAAGGAAAACTGTGTTCCACACCGAAGCTCATTCATTGAGGAATGCTaGTGCCATTTCTGCAGCCAA | + |
Preference number: 4 (lower is better) Translates to: QCRGGFGNKENCVPHRSSFIEEC*CHFCSQ Trigger: TTGGCTGCAGAAATGGCAGCAGCATTCCTCAATGAA...TGAGCTTCGGTGTGGAACACAGTTTTCCTTATTCCCAAAGCCACCCCTGCATTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS-3UTR CCA 90 bp | AATACCACATCACTTCTGCTGTGTGGCAAAAGCCAGACACTGGCAATGGGAACATGGACATCGGATGTCTaGCTGGTCACCAAAGTTCTT | + |
Preference number: 4 (lower is better) Translates to: NTTSLLLCGKSQTLAMGTWTSDV*LVTKVL Trigger: AAGAACTTTGGTGACCAGCCAGACATCCGATGTCCA...TGTTCCCATTGCCAGTGTCTGGCTTTTGCCACACAGCAGAAGTGATGTGGTATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS-3UTR CCA 90 bp | TGCTTGCCTCCCTTCATCTCTCAAAGCAACATTGTACAAAACTGTATTTACAGGGGAGCAGGACAAGGTTaGAGTGGTGCCCAAGAAGCC | + |
Preference number: 4 (lower is better) Translates to: CLPPFISQSNIVQNCIYRGAGQG*SGAQEA Trigger: GGCTTCTTGGGCACCACTCCAACCTTGTCCTGCTCC...CCTGTAAATACAGTTTTGTACAATGTTGCTTTGAGAGATGAAGGGAGGCAAGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS-3UTR CCA 90 bp | CGAAGCTCAGGGCCACACACTATGTTCAAGGAGCAGACTTCAGTGTCAACTGTAGGGTGTGTACTGCAATaGGAAGGCTACTTGATTGAA | + |
Preference number: 4 (lower is better) Translates to: RSSGPHTMFKEQTSVSTVGCVLQ*EGYLIE Trigger: TTCAATCAAGTAGCCTTCCCATTGCAGTACACACCC...TACAGTTGACACTGAAGTCTGCTCCTTGAACATAGTGTGTGGCCCTGAGCTTCG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS-3UTR CCA 90 bp | TTGGGAATAAGGAAAACTGTGTTCCACACCGAAGCTCAGGGCCACACACTATGTATCGTTGGTGTTAGGTaGGAGCCTCACCACACAAAT | + |
Preference number: 4 (lower is better) Translates to: LGIRKTVFHTEAQGHTLCIVGVR*EPHHTN Trigger: ATTTGTGTGGTGAGGCTCCCACCTAACACCAACGAT...ACATAGTGTGTGGCCCTGAGCTTCGGTGTGGAACACAGTTTTCCTTATTCCCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS-3UTR GCA 90 bp | AATACCACATCACTTCTGCTGTGTGGCAAAAGCCAGACACTGGCAATGGGAACATCACAATCGTTTTCTTaGCGGGAGTCTTCCACTCAT | + |
Preference number: 4 (lower is better) Translates to: NTTSLLLCGKSQTLAMGTSQSFS*RESSTH Trigger: ATGAGTGGAAGACTCCCGGCAAGAAAACGATTGTGA...TGTTCCCATTGCCAGTGTCTGGCTTTTGCCACACAGCAGAAGTGATGTGGTATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS-3UTR GCA 90 bp | ACATCACTTCTGCTGTGTGGCAAAAGCCAGACACTGGCAATGGGAACAAAAGAGGTTTTCATTGAGGAATaGTGCTGCCATTTCTGCAGC | + |
Preference number: 4 (lower is better) Translates to: TSLLLCGKSQTLAMGTKEVFIEE*CCHFCS Trigger: GCTGCAGAAATGGCAGCAGCATTCCTCAATGAAAAC...CTCTTTTGTTCCCATTGCCAGTGTCTGGCTTTTGCCACACAGCAGAAGTGATGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS-3UTR GCA 90 bp | AAACTAGTTTTATATATTCAGGAGGGTTCCGAGGGCAGAACTGAGCCACACTGCTCACCACACAAATGTTaGCAAACTTGTCTGCCCCAG | + |
Preference number: 4 (lower is better) Translates to: KLVLYIQEGSEGRTEPHCSPHKC*QTCLPQ Trigger: CTGGGGCAGACAAGTTTGGCAACATTTGTGTGGTGA...GCAGTGTGGCTCAGTTCTGCCCTCGGAACCCTCCTGAATATATAAAACTAGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS-3UTR GCA 90 bp | ATTTACATGGTCAGTGAACTCATGTTCTATCTCCACAGCAAAGAACCAAGACACCCACAAAGAGGGGGATaGTCAGACCGCAGGTGCATT | + |
Preference number: 4 (lower is better) Translates to: IYMVSELMFYLHSKEPRHPQRGG*SDRRCI Trigger: AATGCACCTGCGGTCTGAGCATCCCCCTCTTTGTGG...GTGTCTTGGTTCTTTGCTGTGGAGATAGAACATGAGTTCACTGACCATGTAAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS-3UTR CCA 90 bp | GAAATTACACAATGCAGGGGTGGCTTTGGGAATAAGGAAAACTGTGTTCCACACGGTCATTCCGTCTCCTaGGAATTGGACATCGGATGT | + |
Preference number: 4 (lower is better) Translates to: EITQCRGGFGNKENCVPHGHSVS*ELDIGC Trigger: ACATCCGATGTCCAATTCCCAGGAGACGGAATGACC...GTGTGGAACACAGTTTTCCTTATTCCCAAAGCCACCCCTGCATTGTGTAATTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS-3UTR CCA 90 bp | CCGAAGCTCAGGGCCACACACTATGTTCAAGGAGCAGACTTCAGTGTCAACTGTACTTGGTCTTATGGGTaGCAGAGCAAACAAAAATCA | + |
Preference number: 4 (lower is better) Translates to: PKLRATHYVQGADFSVNCTWSYG*QSKQKS Trigger: TGATTTTTGTTTGCTCTGCCACCCATAAGACCAAGT...ACAGTTGACACTGAAGTCTGCTCCTTGAACATAGTGTGTGGCCCTGAGCTTCGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS-3UTR CCA 90 bp | AAACTAGTTTTATATATTCAGGAGGGTTCCGAGGGCAGAACTGAGCCACACTGCATCACCACTTGTCGCTaGTTCACTGCACACTTCACA | + |
Preference number: 4 (lower is better) Translates to: KLVLYIQEGSEGRTEPHCITTCR*FTAHFT Trigger: TGTGAAGTGTGCAGTGAACCAGCGACAAGTGGTGAT...GCAGTGTGGCTCAGTTCTGCCCTCGGAACCCTCCTGAATATATAAAACTAGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS-3UTR CCA 90 bp | AGCAAAGAAGTAAAAGATCCAGTTATTGTTCTAATTAGGCCTCAAGCCTTTCTCCTCCAGGGGGCACGTTaGCCAGACTCATGCACACCA | + |
Preference number: 4 (lower is better) Translates to: SKEVKDPVIVLIRPQAFLLQGAR*PDSCTP Trigger: TGGTGTGCATGAGTCTGGCCAACGTGCCCCCTGGAG...GAGAAAGGCTTGAGGCCTAATTAGAACAATAACTGGATCTTTTACTTCTTTGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS-3UTR CCA 90 bp | CAATGCAGGGGTGGCTTTGGGAATAAGGAAAACTGTGTTCCACACCGAAGCTCATGGGAGCTCCAAAAATaGATTCTGGGAGGTTTTCAT | + |
Preference number: 4 (lower is better) Translates to: QCRGGFGNKENCVPHRSSWELQK*ILGGFH Trigger: ATGAAAACCTCCCAGAATCCATTTTTGGAGCTCCCA...TGAGCTTCGGTGTGGAACACAGTTTTCCTTATTCCCAAAGCCACCCCTGCATTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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3UTR CAA 72 bp | GACAAGAGCCAGAAATTACACAATGCAGGGGTGGCTTaGGGAATAAGGAAAACTGTGTTCCACACCGAAGCT | + |
Preference number: 4 (lower is better) Translates to: DKSQKLHNAGVA*GIRKTVFHTEA Trigger: AGCTTCGGTGTGGAACACAGTTTTCCTTATTCCCAAAGCCACCCCTGCATTGTGTAATTTCTGGCTCTTGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS-3UTR TCA 90 bp | TGCTTGCCTCCCTTCATCTCTCAAAGCAACATTGTACAAAACTGTATTTACAGGCATAAGACAGAGGGGTaGGATGGAAGCGAGACTGGT | + |
Preference number: 4 (lower is better) Translates to: CLPPFISQSNIVQNCIYRHKTEG*DGSETG Trigger: ACCAGTCTCGCTTCCATCTCACCCCTCTGTCTTATG...CCTGTAAATACAGTTTTGTACAATGTTGCTTTGAGAGATGAAGGGAGGCAAGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS-3UTR GCA 90 bp | TGCTTGCCTCCCTTCATCTCTCAAAGCAACATTGTACAAAACTGTATTTACAGGTGGGCTGGGAGAGCCTaGATACTCAGAGGCTGTAAA | + |
Preference number: 4 (lower is better) Translates to: CLPPFISQSNIVQNCIYRWAGRA*ILRGCK Trigger: TTTACAGCCTCTGAGTATGCAGGCTCTCCCAGCCCA...CCTGTAAATACAGTTTTGTACAATGTTGCTTTGAGAGATGAAGGGAGGCAAGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS-3UTR GCA 90 bp | ATTTACATGGTCAGTGAACTCATGTTCTATCTCCACAGCAAAGAACCAAGACACTGGAGATGGCAACAATaGCCTCGGGACACTGTTCAG | + |
Preference number: 4 (lower is better) Translates to: IYMVSELMFYLHSKEPRHWRWQQ*PRDTVQ Trigger: CTGAACAGTGTCCCGAGGGCATTGTTGCCATCTCCA...GTGTCTTGGTTCTTTGCTGTGGAGATAGAACATGAGTTCACTGACCATGTAAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS-3UTR CCA 90 bp | CCACACCGAAGCTCAGGGCCACACACTATGTTCAAGGAGCAGACTTCAGTGTCATCCCAGATATGTAATTaGCAATATGCTTATTCTCAC | + |
Preference number: 4 (lower is better) Translates to: PHRSSGPHTMFKEQTSVSSQICN*QYAYSH Trigger: GTGAGAATAAGCATATTGCCAATTACATATCTGGGA...TGACACTGAAGTCTGCTCCTTGAACATAGTGTGTGGCCCTGAGCTTCGGTGTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS-3UTR CCA 90 bp | AATGCAGTCTTAAATACCACATCACTTCTGCTGTGTGGCAAAAGCCAGACACTGGGGCTTTGTTTCCAGTaGGATCTTCATCCACCTCAT | + |
Preference number: 4 (lower is better) Translates to: NAVLNTTSLLLCGKSQTLGLCFQ*DLHPPH Trigger: ATGAGGTGGATGAAGATCCCACTGGAAACAAAGCCC...CAGTGTCTGGCTTTTGCCACACAGCAGAAGTGATGTGGTATTTAAGACTGCATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS-3UTR CCA 90 bp | ATTTACATGGTCAGTGAACTCATGTTCTATCTCCACAGCAAAGAACCAAGACACCTCCAGGGATCAGTGTaGTCTTCTGTAGCGACAGCA | + |
Preference number: 4 (lower is better) Translates to: IYMVSELMFYLHSKEPRHLQGSV*SSVATA Trigger: TGCTGTCGCTACAGAAGACCACACTGATCCCTGGAG...GTGTCTTGGTTCTTTGCTGTGGAGATAGAACATGAGTTCACTGACCATGTAAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS-3UTR TCA 90 bp | AATACCACATCACTTCTGCTGTGTGGCAAAAGCCAGACACTGGCAATGGGAACATCACGAAAGACACAATaGTGTAGGCATCAAACTCAT | + |
Preference number: 4 (lower is better) Translates to: NTTSLLLCGKSQTLAMGTSRKTQ*CRHQTH Trigger: ATGAGTTTGATGCCTACATCATTGTGTCTTTCGTGA...TGTTCCCATTGCCAGTGTCTGGCTTTTGCCACACAGCAGAAGTGATGTGGTATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS-3UTR TCA 90 bp | TTTGCTTGCCTCCCTTCATCTCTCAAAGCAACATTGTACAAAACTGTATTTACAGGTCCTCGTGAGACGTaGAAGGGACAAGGATGCCAA | + |
Preference number: 4 (lower is better) Translates to: FACLPSSLKATLYKTVFTGPRET*KGQGCQ Trigger: TTGGCATCCTTGTCCCTTTCACGTCTCACGAGGACC...TGTAAATACAGTTTTGTACAATGTTGCTTTGAGAGATGAAGGGAGGCAAGCAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS-3UTR GCA 90 bp | TTTAACAATGCAGTCTTAAATACCACATCACTTCTGCTGTGTGGCAAAAGCCAGCCATCTGGATACACCTaGACCAGTGCATCATCTCCT | + |
Preference number: 4 (lower is better) Translates to: FNNAVLNTTSLLLCGKSQPSGYT*TSASSP Trigger: AGGAGATGATGCACTGGTGCAGGTGTATCCAGATGG...CTGGCTTTTGCCACACAGCAGAAGTGATGTGGTATTTAAGACTGCATTGTTAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS-3UTR GCA 90 bp | AATGCAGTCTTAAATACCACATCACTTCTGCTGTGTGGCAAAAGCCAGACACTGTCCATGGAGTTGAACTaGTCACAAAGGTCTCCATCA | + |
Preference number: 4 (lower is better) Translates to: NAVLNTTSLLLCGKSQTLSMELN*SQRSPS Trigger: TGATGGAGACCTTTGTGAGCAGTTCAACTCCATGGA...CAGTGTCTGGCTTTTGCCACACAGCAGAAGTGATGTGGTATTTAAGACTGCATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS-3UTR CCA 90 bp | TGCTTGCCTCCCTTCATCTCTCAAAGCAACATTGTACAAAACTGTATTTACAGGTCCACAGCTAAGAACTaGCCAGGAACAATACGGCGA | + |
Preference number: 4 (lower is better) Translates to: CLPPFISQSNIVQNCIYRSTAKN*PGTIRR Trigger: TCGCCGTATTGTTCCTGGCCAGTTCTTAGCTGTGGA...CCTGTAAATACAGTTTTGTACAATGTTGCTTTGAGAGATGAAGGGAGGCAAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS-3UTR CCA 90 bp | TGCTTGCCTCCCTTCATCTCTCAAAGCAACATTGTACAAAACTGTATTTACAGGGCCCATTGCCAGCCTTaGGAGCTCCAAAAATGGATT | + |
Preference number: 4 (lower is better) Translates to: CLPPFISQSNIVQNCIYRAHCQP*ELQKWI Trigger: AATCCATTTTTGGAGCTCCCAAGGCTGGCAATGGGC...CCTGTAAATACAGTTTTGTACAATGTTGCTTTGAGAGATGAAGGGAGGCAAGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS-3UTR CCA 90 bp | AATGCAGTCTTAAATACCACATCACTTCTGCTGTGTGGCAAAAGCCAGACACTGTGCATTTCAACATGCTaGAAGAAGTCATGGTCCTCG | + |
Preference number: 4 (lower is better) Translates to: NAVLNTTSLLLCGKSQTLCISTC*KKSWSS Trigger: CGAGGACCATGACTTCTTCCAGCATGTTGAAATGCA...CAGTGTCTGGCTTTTGCCACACAGCAGAAGTGATGTGGTATTTAAGACTGCATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS-3UTR TCA 90 bp | GGGAAAGGGAAAACACCCTCTTTAATATCCATGAATAGTGGGGTTACATTTACATGGGTTCCATGGAGTTaGACTGCTCACAAAGGTCTC | + |
Preference number: 4 (lower is better) Translates to: GKGKTPSLISMNSGVTFTWVPWS*TAHKGL Trigger: GAGACCTTTGTGAGCAGTTCAACTCCATGGAACCCA...TGTAAATGTAACCCCACTATTCATGGATATTAAAGAGGGTGTTTTCCCTTTCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS-3UTR GCA 90 bp | ACTGGCTTTAACAATGCAGTCTTAAATACCACATCACTTCTGCTGTGTGGCAAATCCGGCCTGAGTCACTaGCAACTACAATGTAGTCTT | + |
Preference number: 4 (lower is better) Translates to: TGFNNAVLNTTSLLLCGKSGLSH*QLQCSL Trigger: AAGACTACATTGTAGTTGGCAGTGACTCAGGCCGGA...TTTGCCACACAGCAGAAGTGATGTGGTATTTAAGACTGCATTGTTAAAGCCAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS-3UTR GCA 90 bp | GGGAATAAGGAAAACTGTGTTCCACACCGAAGCTCAGGGCCACACACTATGTTCTTTCTGCTTCTCAATTaGACTAATCATAACAGCTCT | + |
Preference number: 4 (lower is better) Translates to: GNKENCVPHRSSGPHTMFFLLLN*TNHNSS Trigger: AGAGCTGTTATGATTAGTGCAATTGAGAAGCAGAAA...GAACATAGTGTGTGGCCCTGAGCTTCGGTGTGGAACACAGTTTTCCTTATTCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS-3UTR GCA 90 bp | AATAGTGGGGTTACATTTACATGGTCAGTGAACTCATGTTCTATCTCCACAGCAAATGGTAAGTCGGGCTaGAGCGTCTCTGTTCAAGAT | + |
Preference number: 4 (lower is better) Translates to: NSGVTFTWSVNSCSISTANGKSG*SVSVQD Trigger: ATCTTGAACAGAGACGCTGCAGCCCGACTTACCATT...TGCTGTGGAGATAGAACATGAGTTCACTGACCATGTAAATGTAACCCCACTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS-3UTR CCA 90 bp | ATTTACATGGTCAGTGAACTCATGTTCTATCTCCACAGCAAAGAACCAAGACACAAAGTAAGTGTCTGCTaGGTATTGGCTGCTGCTTCC | + |
Preference number: 4 (lower is better) Translates to: IYMVSELMFYLHSKEPRHKVSVC*VLAAAS Trigger: GGAAGCAGCAGCCAATACCCAGCAGACACTTACTTT...GTGTCTTGGTTCTTTGCTGTGGAGATAGAACATGAGTTCACTGACCATGTAAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS-3UTR CCA 90 bp | TTTAACAATGCAGTCTTAAATACCACATCACTTCTGCTGTGTGGCAAAAGCCAGTCAGTATCAAGTCCTTaGCAACACCCACCAGCACAT | + |
Preference number: 4 (lower is better) Translates to: FNNAVLNTTSLLLCGKSQSVSSP*QHPPAH Trigger: ATGTGCTGGTGGGTGTTGCCAAGGACTTGATACTGA...CTGGCTTTTGCCACACAGCAGAAGTGATGTGGTATTTAAGACTGCATTGTTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS-3UTR CCA 90 bp | TTGGGAATAAGGAAAACTGTGTTCCACACCGAAGCTCAGGGCCACACACTATGTCAGATGAAACTTTCTTaGACATCAGACACAATTACC | + |
Preference number: 4 (lower is better) Translates to: LGIRKTVFHTEAQGHTLCQMKLS*TSDTIT Trigger: GGTAATTGTGTCTGATGTCCAAGAAAGTTTCATCTG...ACATAGTGTGTGGCCCTGAGCTTCGGTGTGGAACACAGTTTTCCTTATTCCCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS-3UTR TCA 90 bp | GCCTCCCTTCATCTCTCAAAGCAACATTGTACAAAACTGTATTTACAGGAAAACCTGGGAGGTTTTCATTaGGGAATGCTGCTGCCATTT | + |
Preference number: 4 (lower is better) Translates to: ASLHLSKQHCTKLYLQENLGGFH*GMLLPF Trigger: AAATGGCAGCAGCATTCCTCAATGAAAACCTCCCAG...GTTTTCCTGTAAATACAGTTTTGTACAATGTTGCTTTGAGAGATGAAGGGAGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS-3UTR GCA 90 bp | GGGAAAGGGAAAACACCCTCTTTAATATCCATGAATAGTGGGGTTACATTTACAAACTCATCTTCAATGTaGCGACGGACTGTCCAGACA | + |
Preference number: 4 (lower is better) Translates to: GKGKTPSLISMNSGVTFTNSSSM*RRTVQT Trigger: TGTCTGGACAGTCCGTCGGCACATTGAAGATGAGTT...TGTAAATGTAACCCCACTATTCATGGATATTAAAGAGGGTGTTTTCCCTTTCCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS-3UTR GCA 90 bp | ACTGGCTTTAACAATGCAGTCTTAAATACCACATCACTTCTGCTGTGTGGCAAAAGGTGCATTTCAACATaGTGGAAGAAGTCATGGTCC | + |
Preference number: 4 (lower is better) Translates to: TGFNNAVLNTTSLLLCGKRCIST*WKKSWS Trigger: GGACCATGACTTCTTCCAGCATGTTGAAATGCACCT...TTTGCCACACAGCAGAAGTGATGTGGTATTTAAGACTGCATTGTTAAAGCCAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS-3UTR CCA 90 bp | TGCTTGCCTCCCTTCATCTCTCAAAGCAACATTGTACAAAACTGTATTTACAGGCCAGAAAGAAGAACATaGACTTGGTCTTATGGGTGG | + |
Preference number: 4 (lower is better) Translates to: CLPPFISQSNIVQNCIYRPERRT*TWSYGW Trigger: CCACCCATAAGACCAAGTCCATGTTCTTCTTTCTGG...CCTGTAAATACAGTTTTGTACAATGTTGCTTTGAGAGATGAAGGGAGGCAAGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS-3UTR CCA 90 bp | ACTGGCTTTAACAATGCAGTCTTAAATACCACATCACTTCTGCTGTGTGGCAAAAATCTTCACCAGTGTTaGAGAACCTACACACTGCCA | + |
Preference number: 4 (lower is better) Translates to: TGFNNAVLNTTSLLLCGKNLHQC*RTYTLP Trigger: TGGCAGTGTGTAGGTTCTCCAACACTGGTGAAGATT...TTTGCCACACAGCAGAAGTGATGTGGTATTTAAGACTGCATTGTTAAAGCCAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS-3UTR TCA 90 bp | TTTAACAATGCAGTCTTAAATACCACATCACTTCTGCTGTGTGGCAAAAGCCAGCAAATACTTCAACAGTaGGGAGGGTATGTACTTTGC | + |
Preference number: 4 (lower is better) Translates to: FNNAVLNTTSLLLCGKSQQILQQ*GGYVLC Trigger: GCAAAGTACATACCCTCCTCACTGTTGAAGTATTTG...CTGGCTTTTGCCACACAGCAGAAGTGATGTGGTATTTAAGACTGCATTGTTAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS-3UTR TCA 90 bp | GAAATTACACAATGCAGGGGTGGCTTTGGGAATAAGGAAAACTGTGTTCCACACCAAAGTTCTTGTAGGTaGTATAATTCTCAGAGCAGA | + |
Preference number: 4 (lower is better) Translates to: EITQCRGGFGNKENCVPHQSSCR*YNSQSR Trigger: TCTGCTCTGAGAATTATATCACCTACAAGAACTTTG...GTGTGGAACACAGTTTTCCTTATTCCCAAAGCCACCCCTGCATTGTGTAATTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS-3UTR TCA 90 bp | ATTTACATGGTCAGTGAACTCATGTTCTATCTCCACAGCAAAGAACCAAGACACATGATTTCCAAATTCTaGCGCCACAAAAAGGAAGCC | + |
Preference number: 4 (lower is better) Translates to: IYMVSELMFYLHSKEPRHMISKF*RHKKEA Trigger: GGCTTCCTTTTTGTGGCGTCAGAATTTGGAAATCAT...GTGTCTTGGTTCTTTGCTGTGGAGATAGAACATGAGTTCACTGACCATGTAAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS-3UTR GCA 90 bp | AGCAAAGAAGTAAAAGATCCAGTTATTGTTCTAATTAGGCCTCAAGCCTTTCTCATTGAGGAATGCTGCTaGCATTTCTGCAGCCAACTC | + |
Preference number: 4 (lower is better) Translates to: SKEVKDPVIVLIRPQAFLIEECC*HFCSQL Trigger: GAGTTGGCTGCAGAAATGGCAGCAGCATTCCTCAAT...GAGAAAGGCTTGAGGCCTAATTAGAACAATAACTGGATCTTTTACTTCTTTGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS-3UTR CCA 90 bp | TGCTTGCCTCCCTTCATCTCTCAAAGCAACATTGTACAAAACTGTATTTACAGGCAATTTCCTGTTGCTTaGTTCCAGAGAAGTTGCCAT | + |
Preference number: 4 (lower is better) Translates to: CLPPFISQSNIVQNCIYRQFPVA*FQRSCH Trigger: ATGGCAACTTCTCTGGAACCAAGCAACAGGAAATTG...CCTGTAAATACAGTTTTGTACAATGTTGCTTTGAGAGATGAAGGGAGGCAAGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS-3UTR CCA 90 bp | CCAGTTATTGTTCTAATTAGGCCTCAAGCCTTTCTCCAGAATTATCACTCCCAGGCAAAGATAATGAGCTaGTTCTCGTTACGCTTGTAT | + |
Preference number: 4 (lower is better) Translates to: PVIVLIRPQAFLQNYHSQAKIMS*FSLRLY Trigger: ATACAAGCGTAACGAGAACCAGCTCATTATCTTTGC...CTGGGAGTGATAATTCTGGAGAAAGGCTTGAGGCCTAATTAGAACAATAACTGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS-3UTR CCA 90 bp | TTTAACAATGCAGTCTTAAATACCACATCACTTCTGCTGTGTGGCAAAAGCCAGTTCCTCCAGATAAAGTaGTATAGACAAGGGACTCTG | + |
Preference number: 4 (lower is better) Translates to: FNNAVLNTTSLLLCGKSQFLQIK*YRQGTL Trigger: CAGAGTCCCTTGTCTATACCACTTTATCTGGAGGAA...CTGGCTTTTGCCACACAGCAGAAGTGATGTGGTATTTAAGACTGCATTGTTAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS-3UTR TCA 90 bp | GGGAAAGGGAAAACACCCTCTTTAATATCCATGAATAGTGGGGTTACATTTACATGTATCGAACCCAGATaGAACTTTCTTGGACATCAG | + |
Preference number: 4 (lower is better) Translates to: GKGKTPSLISMNSGVTFTCIEPR*NFLGHQ Trigger: CTGATGTCCAAGAAAGTTTCATCTGGGTTCGATACA...TGTAAATGTAACCCCACTATTCATGGATATTAAAGAGGGTGTTTTCCCTTTCCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS-3UTR GCA 90 bp | TTTGCTTGCCTCCCTTCATCTCTCAAAGCAACATTGTACAAAACTGTATTTACATTAAAGATATCTCCCTaGTCCGTTTGGGCCAGAAAG | + |
Preference number: 4 (lower is better) Translates to: FACLPSSLKATLYKTVFTLKISP*SVWARK Trigger: CTTTCTGGCCCAAACGGAGCAGGGAGATATCTTTAA...TGTAAATACAGTTTTGTACAATGTTGCTTTGAGAGATGAAGGGAGGCAAGCAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS-3UTR GCA 90 bp | GGGAAAGGGAAAACACCCTCTTTAATATCCATGAATAGTGGGGTTACATTTACAACAACAATTTCCTGTTaGTTGGTTCCAGAGAAGTTG | + |
Preference number: 4 (lower is better) Translates to: GKGKTPSLISMNSGVTFTTTISC*LVPEKL Trigger: CAACTTCTCTGGAACCAAGCAACAGGAAATTGTTGT...TGTAAATGTAACCCCACTATTCATGGATATTAAAGAGGGTGTTTTCCCTTTCCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS-3UTR GCA 90 bp | AGCAAAGAAGTAAAAGATCCAGTTATTGTTCTAATTAGGCCTCAAGCCTTTCTCTTGTCGCTGGTTCACTaGACACTTCACAATCGTTTT | + |
Preference number: 4 (lower is better) Translates to: SKEVKDPVIVLIRPQAFLLSLVH*TLHNRF Trigger: AAAACGATTGTGAAGTGTGCAGTGAACCAGCGACAA...GAGAAAGGCTTGAGGCCTAATTAGAACAATAACTGGATCTTTTACTTCTTTGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS-3UTR TCA 90 bp | TTTGCTTGCCTCCCTTCATCTCTCAAAGCAACATTGTACAAAACTGTATTTACACTCAAACATATTCTTTaGTGGCTGGTATTCCAAGAT | + |
Preference number: 4 (lower is better) Translates to: FACLPSSLKATLYKTVFTLKHIL*WLVFQD Trigger: ATCTTGGAATACCAGCCATCAAAGAATATGTTTGAG...TGTAAATACAGTTTTGTACAATGTTGCTTTGAGAGATGAAGGGAGGCAAGCAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS CCA 90 bp | GCCCCACAGCCAGGAACCGAGATCGCTGTTCTCCAGGGGGCACGTTaGCCAGACTCATGCACACCACATCTGCTGACATCTCTTTCCGCT | + |
Preference number: 5 (lower is better) Translates to: APQPGTEIAVLQGAR*PDSCTPHLLTSLSA Trigger: AGCGGAAAGAGATGTCAGCAGATGTGGTGTGCATGAGTCTGGCCAACGTGCCCCCTGGAGAACAGCGATCTCGGTTCCTGGCTGTGGGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS GCA 90 bp | GGAACCGAGATCGCTGTTCTCCAGGGGGCACGTTGGCCAGACTCATaGACACCACATCTGCTGACATCTCTTTCCGCTCCGTGTACTCAT | + |
Preference number: 5 (lower is better) Translates to: GTEIAVLQGARWPDS*TPHLLTSLSAPCTH Trigger: ATGAGTACACGGAGCGGAAAGAGATGTCAGCAGATGTGGTGTGCATGAGTCTGGCCAACGTGCCCCCTGGAGAACAGCGATCTCGGTTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS-3UTR CAA 90 bp | GAGCCACACTGCAATCAGCCTGGCTGCACCTTTGCTTGCCTCCCTTCATCTCTCCTGCTGCTTCCCCTGTaGGATCATTGTCTGCCTCCT | + |
Preference number: 5 (lower is better) Translates to: EPHCNQPGCTFACLPSSLLLLPL*DHCLPP Trigger: AGGAGGCAGACAATGATCCAACAGGGGAAGCAGCAG...GAGAGATGAAGGGAGGCAAGCAAAGGTGCAGCCAGGCTGATTGCAGTGTGGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS GCA 90 bp | GTATTCCCCTGGATAGGGTTCATCACCCGAATCACAGAGGCCCACTaGCCATTGCCAGCCTTGGGAGCTCCAAAAATGGATTCTGGGAGG | + |
Preference number: 5 (lower is better) Translates to: VFPWIGFITRITEAH*PLPALGAPKMDSGR Trigger: CCTCCCAGAATCCATTTTTGGAGCTCCCAAGGCTGGCAATGGGCAGTGGGCCTCTGTGATTCGGGTGATGAACCCTATCCAGGGGAATAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS GCA 90 bp | GGTGTTAGGTGGGAGCCTCACCACACAAATGTTGCCAAACTTGTCTaGCCCAGCCACAGTGTCATAGTCGAGAAGGCTGGCTGTGGTGAC | + |
Preference number: 5 (lower is better) Translates to: GVRWEPHHTNVAKLV*PSHSVIVEKAGCGD Trigger: GTCACCACAGCCAGCCTTCTCGACTATGACACTGTGGCTGGGGCAGACAAGTTTGGCAACATTTGTGTGGTGAGGCTCCCACCTAACACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS CCA 90 bp | AAAGCTTCCCGACACCAATCAGTACCCTCCCCTGGAATGGGGCAATaGCAGCAGGGACCTCTTCCACTGGAGTCTTGTGCAGAAACTCCA | + |
Preference number: 5 (lower is better) Translates to: KASRHQSVPSPGMGQ*QQGPLPLESCAETP Trigger: TGGAGTTTCTGCACAAGACTCCAGTGGAAGAGGTCCCTGCTGCCATTGCCCCATTCCAGGGGAGGGTACTGATTGGTGTCGGGAAGCTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS CCA 90 bp | GGCATAGCGGGTCCTAATGTCCTCAAGCTTCTTGGACACTTCAGGTaGGGTTCGGTCCAGCTCCTCAGAGACGTTCTTCTGCTTGTTGGG | + |
Preference number: 5 (lower is better) Translates to: GIAGPNVLKLLGHFR*GSVQLLRDVLLLVG Trigger: CCCAACAAGCAGAAGAACGTCTCTGAGGAGCTGGACCGAACCCCACCTGAAGTGTCCAAGAAGCTTGAGGACATTAGGACCCGCTATGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS GCA 90 bp | CAGCTCTCCCCCAGTCAGGGCGATCACCACTTGTCGCTGGTTCACTaGACACTTCACAATCGTTTTCTTGCCGGGAGTCTTCCACTCATT | + |
Preference number: 5 (lower is better) Translates to: QLSPSQGDHHLSLVH*TLHNRFLAGSLPLI Trigger: AATGAGTGGAAGACTCCCGGCAAGAAAACGATTGTGAAGTGTGCAGTGAACCAGCGACAAGTGGTGATCGCCCTGACTGGGGGAGAGCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS GCA 90 bp | GATGGCAACAATGCCCTCGGGACACTGTTCAGAGGCAAAGCCCGATaGAAATTCCAGGGTCTCATAAGACAGAGGGGTGAGATGGAAGCG | + |
Preference number: 5 (lower is better) Translates to: DGNNALGTLFRGKAR*KFQGLIRQRGEMEA Trigger: CGCTTCCATCTCACCCCTCTGTCTTATGAGACCCTGGAATTTGCATCGGGCTTTGCCTCTGAACAGTGTCCCGAGGGCATTGTTGCCATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS CCA 90 bp | GCTGCCTCGTTTTGCTCCAACTGGACAAGGTCTAGTGTATTCCCCTaGATAGGGTTCATCACCCGAATCACAGAGGCCCACTGCCCATTG | + |
Preference number: 5 (lower is better) Translates to: AASFCSNWTRSSVFP*IGFITRITEAHCPL Trigger: CAATGGGCAGTGGGCCTCTGTGATTCGGGTGATGAACCCTATCCAGGGGAATACACTAGACCTTGTCCAGTTGGAGCAAAACGAGGCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS-3UTR CAA 90 bp | CCACACCGAAGCTCAGGGCCACACACTATGTTCAAGGAGCAGACTTCAGTGTCATCCGTCTCCTGGGAATaGGACATCGGATGTCTGGCT | + |
Preference number: 5 (lower is better) Translates to: PHRSSGPHTMFKEQTSVSSVSWE*DIGCLA Trigger: AGCCAGACATCCGATGTCCAATTCCCAGGAGACGGA...TGACACTGAAGTCTGCTCCTTGAACATAGTGTGTGGCCCTGAGCTTCGGTGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS-3UTR CAA 90 bp | CCGAAGCTCAGGGCCACACACTATGTTCAAGGAGCAGACTTCAGTGTCAACTGTAGGAGCAGGACAAGGTaGGAGTGGTGCCCAAGAAGC | + |
Preference number: 5 (lower is better) Translates to: PKLRATHYVQGADFSVNCRSRTR*EWCPRS Trigger: GCTTCTTGGGCACCACTCCAACCTTGTCCTGCTCCT...ACAGTTGACACTGAAGTCTGCTCCTTGAACATAGTGTGTGGCCCTGAGCTTCGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS TCA 90 bp | AGGCAAAGCCCGATGCAAATTCCAGGGTCTCATAAGACAGAGGGGTaGGATGGAAGCGAGACTGGTAAGAGTAGCTCAGCCATGAGCGAC | + |
Preference number: 5 (lower is better) Translates to: RQSPMQIPGSHKTEG*DGSETGKSSSAMSD Trigger: GTCGCTCATGGCTGAGCTACTCTTACCAGTCTCGCTTCCATCTCACCCCTCTGTCTTATGAGACCCTGGAATTTGCATCGGGCTTTGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS GCA 90 bp | CCCATTTCCACAATACATAGAGACTCAGGCTGGGCTGGGAGAGCCTaGATACTCAGAGGCTGTAAACAGTCTGATGGGTCGAGGGAGATG | + |
Preference number: 5 (lower is better) Translates to: PISTIHRDSGWAGRA*ILRGCKQSDGSREM Trigger: CATCTCCCTCGACCCATCAGACTGTTTACAGCCTCTGAGTATGCAGGCTCTCCCAGCCCAGCCTGAGTCTCTATGTATTGTGGAAATGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS GCA 90 bp | CTTCTCCCCGTTGTTCACAAGCTTGTACGTATACACAAAGCCCCCTaGCACAGATCGAGGGCTCAGTATCAAGTCCTTGGCAACACCCAC | + |
Preference number: 5 (lower is better) Translates to: LLPVVHKLVRIHKAP*HRSRAQYQVLGNTH Trigger: GTGGGTGTTGCCAAGGACTTGATACTGAGCCCTCGATCTGTGGCAGGGGGCTTTGTGTATACGTACAAGCTTGTGAACAACGGGGAGAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS GCA 90 bp | GACACTTCAGGTGGGGTTCGGTCCAGCTCCTCAGAGACGTTCTTCTaGTTGTTGGGTTCCATGGAGTTGAACTGCTCACAAAGGTCTCCA | + |
Preference number: 5 (lower is better) Translates to: DTSGGVRSSSSETFF*LLGSMELNCSQRSP Trigger: TGGAGACCTTTGTGAGCAGTTCAACTCCATGGAACCCAACAAGCAGAAGAACGTCTCTGAGGAGCTGGACCGAACCCCACCTGAAGTGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS CCA 90 bp | GCACCAGTGCATCATCTCCTAACAAGGAGCAGGACAAGGTTGGAGTaGTGCCCAAGAAGCCAGAGTCAGTCACTTCTTCCACAGTCTCTC | + |
Preference number: 5 (lower is better) Translates to: APVHHLLTRSRTRLE*CPRSQSQSLLPQSL Trigger: GAGAGACTGTGGAAGAAGTGACTGACTCTGGCTTCTTGGGCACCACTCCAACCTTGTCCTGCTCCTTGTTAGGAGATGATGCACTGGTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS CCA 90 bp | ACACAAAGCCCCCTGCCACAGATCGAGGGCTCAGTATCAAGTCCTTaGCAACACCCACCAGCACATACCAATCTTCACCAGTGTTGGAGA | + |
Preference number: 5 (lower is better) Translates to: TQSPLPQIEGSVSSP*QHPPAHTNLHQCWR Trigger: TCTCCAACACTGGTGAAGATTGGTATGTGCTGGTGGGTGTTGCCAAGGACTTGATACTGAGCCCTCGATCTGTGGCAGGGGGCTTTGTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS-3UTR CAA 90 bp | AAACTAGTTTTATATATTCAGGAGGGTTCCGAGGGCAGAACTGAGCCACACTGCTCTCCAGGGGGCACGTaGGCCAGACTCATGCACACC | + |
Preference number: 5 (lower is better) Translates to: KLVLYIQEGSEGRTEPHCSPGGT*ARLMHT Trigger: GGTGTGCATGAGTCTGGCCAACGTGCCCCCTGGAGA...GCAGTGTGGCTCAGTTCTGCCCTCGGAACCCTCCTGAATATATAAAACTAGTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS-3UTR CAA 90 bp | CACTGCAATCAGCCTGGCTGCACCTTTGCTTGCCTCCCTTCATCTCTCAAAGCACTCACCCAGCTCATCTaGTTTCTCAGTCCCACCCAT | + |
Preference number: 5 (lower is better) Translates to: HCNQPGCTFACLPSSLKALTQLI*FLSPTH Trigger: ATGGGTGGGACTGAGAAACAAGATGAGCTGGGTGAG...TGCTTTGAGAGATGAAGGGAGGCAAGCAAAGGTGCAGCCAGGCTGATTGCAGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS-3UTR CAA 90 bp | CACTGCAATCAGCCTGGCTGCACCTTTGCTTGCCTCCCTTCATCTCTCAAAGCATGCCCATTGCCAGCCTaGGGAGCTCCAAAAATGGAT | + |
Preference number: 5 (lower is better) Translates to: HCNQPGCTFACLPSSLKACPLPA*GAPKMD Trigger: ATCCATTTTTGGAGCTCCCAAGGCTGGCAATGGGCA...TGCTTTGAGAGATGAAGGGAGGCAAGCAAAGGTGCAGCCAGGCTGATTGCAGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS TCA 90 bp | CAAGCAAACATAGGATTCTCAAATCCCACGTCTACGCCAACCACGTaGTACACCAGAGTGTTCGCTTTGTGGGCCTCCAGGGGAGAGGAA | + |
Preference number: 5 (lower is better) Translates to: QANIGFSNPTSTPTT*YTRVFALWASRGEE Trigger: TTCCTCTCCCCTGGAGGCCCACAAAGCGAACACTCTGGTGTATCACGTGGTTGGCGTAGACGTGGGATTTGAGAATCCTATGTTTGCTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS TCA 90 bp | TGCCAGCCTTGGGAGCTCCAAAAATGGATTCTGGGAGGTTTTCATTaGGGAATGCTGCTGCCATTTCTGCAGCCAACTCCCGCTCATCCT | + |
Preference number: 5 (lower is better) Translates to: CQPWELQKWILGGFH*GMLLPFLQPTPAHP Trigger: AGGATGAGCGGGAGTTGGCTGCAGAAATGGCAGCAGCATTCCTCAATGAAAACCTCCCAGAATCCATTTTTGGAGCTCCCAAGGCTGGCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS-3UTR CAA 90 bp | AATACCACATCACTTCTGCTGTGTGGCAAAAGCCAGACACTGGCAATGGGAACACAGGGCGATCACCACTaGTCGCTGGTTCACTGCACA | + |
Preference number: 5 (lower is better) Translates to: NTTSLLLCGKSQTLAMGTQGDHH*SLVHCT Trigger: TGTGCAGTGAACCAGCGACAAGTGGTGATCGCCCTG...TGTTCCCATTGCCAGTGTCTGGCTTTTGCCACACAGCAGAAGTGATGTGGTATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS-3UTR CAA 90 bp | GAAATTACACAATGCAGGGGTGGCTTTGGGAATAAGGAAAACTGTGTTCCACACAACAGCCTCCTGGCCTaGCATCCGGACCCGGAAGAG | + |
Preference number: 5 (lower is better) Translates to: EITQCRGGFGNKENCVPHNSLLA*HPDPEE Trigger: CTCTTCCGGGTCCGGATGCAAGGCCAGGAGGCTGTT...GTGTGGAACACAGTTTTCCTTATTCCCAAAGCCACCCCTGCATTGTGTAATTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS GCA 90 bp | GTGTTGGAGAACCTACACACTGCCACACTAAAGGCTGCCTCGTTTTaGTCCAACTGGACAAGGTCTAGTGTATTCCCCTGGATAGGGTTC | + |
Preference number: 5 (lower is better) Translates to: VLENLHTATLKAASF*SNWTRSSVFPWIGF Trigger: GAACCCTATCCAGGGGAATACACTAGACCTTGTCCAGTTGGAGCAAAACGAGGCAGCCTTTAGTGTGGCAGTGTGTAGGTTCTCCAACAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS CCA 90 bp | CATCAAACTCATCTTCAATGTGCCGACGGACTGTCCAGACAGCATTaGGGTTACCAGGGAGCTCAGAAACAGCCATTTCCGACACCTCAA | + |
Preference number: 5 (lower is better) Translates to: HQTHLQCADGLSRQH*GYQGAQKQPFPTPQ Trigger: TTGAGGTGTCGGAAATGGCTGTTTCTGAGCTCCCTGGTAACCCCAATGCTGTCTGGACAGTCCGTCGGCACATTGAAGATGAGTTTGATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS CCA 90 bp | ATAAAGTGGTATAGACAAGGGACTCTGAGCCTCCAGGGATCAGTGTaGTCTTCTGTAGCGACAGCACGGTCTCTCCAACGTGGTAGTTCA | + |
Preference number: 5 (lower is better) Translates to: IKWYRQGTLSLQGSV*SSVATARSLQRGSS Trigger: TGAACTACCACGTTGGAGAGACCGTGCTGTCGCTACAGAAGACCACACTGATCCCTGGAGGCTCAGAGTCCCTTGTCTATACCACTTTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS-3UTR CAA 90 bp | GGGAATAAGGAAAACTGTGTTCCACACCGAAGCTCAGGGCCACACACTATGTTCAGGAGGGTATGTACTTaGCCAGTGTTAGGGTCTGGG | + |
Preference number: 5 (lower is better) Translates to: GNKENCVPHRSSGPHTMFRRVCT*PVLGSG Trigger: CCCAGACCCTAACACTGGCAAAGTACATACCCTCCT...GAACATAGTGTGTGGCCCTGAGCTTCGGTGTGGAACACAGTTTTCCTTATTCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS-3UTR CAA 90 bp | CAATGCAGGGGTGGCTTTGGGAATAAGGAAAACTGTGTTCCACACCGAAGCTCAAAAGGCTGCCTCGTTTaGCTCCAACTGGACAAGGTC | + |
Preference number: 5 (lower is better) Translates to: QCRGGFGNKENCVPHRSSKGCLV*LQLDKV Trigger: GACCTTGTCCAGTTGGAGCAAAACGAGGCAGCCTTT...TGAGCTTCGGTGTGGAACACAGTTTTCCTTATTCCCAAAGCCACCCCTGCATTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS-3UTR CAA 90 bp | GCCACACTGCAATCAGCCTGGCTGCACCTTTGCTTGCCTCCCTTCATCTCTCAATGGTTCTCGTTACGCTaGTATCGAACCCAGATGAAA | + |
Preference number: 5 (lower is better) Translates to: ATLQSAWLHLCLPPFISQWFSLR*YRTQMK Trigger: TTTCATCTGGGTTCGATACAAGCGTAACGAGAACCA...TTGAGAGATGAAGGGAGGCAAGCAAAGGTGCAGCCAGGCTGATTGCAGTGTGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS-3UTR CAA 90 bp | CGAAGCTCAGGGCCACACACTATGTTCAAGGAGCAGACTTCAGTGTCAACTGTACAAATGTTGCCAAACTaGTCTGCCCCAGCCACAGTG | + |
Preference number: 5 (lower is better) Translates to: RSSGPHTMFKEQTSVSTVQMLPN*SAPATV Trigger: CACTGTGGCTGGGGCAGACAAGTTTGGCAACATTTG...TACAGTTGACACTGAAGTCTGCTCCTTGAACATAGTGTGTGGCCCTGAGCTTCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS CCA 90 bp | CCCTGCTCCGTTTGGGCCAGAAAGAAGAACATGGACTTGGTCTTATaGGTGGCAGAGCAAACAAAAATCATTCCTCGTTCAGGGTCATCC | + |
Preference number: 5 (lower is better) Translates to: PCSVWARKKNMDLVL*VAEQTKIIPRSGSS Trigger: GGATGACCCTGAACGAGGAATGATTTTTGTTTGCTCTGCCACCCATAAGACCAAGTCCATGTTCTTCTTTCTGGCCCAAACGGAGCAGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS CCA 90 bp | TGTTTCTCAGTCCCACCCATTTCCACAATACATAGAGACTCAGGCTaGGCTGGGAGAGCCTGCATACTCAGAGGCTGTAAACAGTCTGAT | + |
Preference number: 5 (lower is better) Translates to: CFSVPPISTIHRDSG*AGRACILRGCKQSD Trigger: ATCAGACTGTTTACAGCCTCTGAGTATGCAGGCTCTCCCAGCCCAGCCTGAGTCTCTATGTATTGTGGAAATGGGTGGGACTGAGAAACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS-3UTR CAA 90 bp | AAACTAGTTTTATATATTCAGGAGGGTTCCGAGGGCAGAACTGAGCCACACTGCACTGTCCAGACAGCATaGGGGTTACCAGGGAGCTCA | + |
Preference number: 5 (lower is better) Translates to: KLVLYIQEGSEGRTEPHCTVQTA*GLPGSS Trigger: TGAGCTCCCTGGTAACCCCAATGCTGTCTGGACAGT...GCAGTGTGGCTCAGTTCTGCCCTCGGAACCCTCCTGAATATATAAAACTAGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS TCA 90 bp | CTGTCCAGTTCATCCACCAGCACGAGATTTTTGAGTGGTCTCGGCTaGAAGAAGAATGTGTCTCCTTCTTCTAGAGGCATGGCAGACGAA | + |
Preference number: 5 (lower is better) Translates to: LSSSSTSTRFLSGLG*KKNVSPSSRGMADE Trigger: TTCGTCTGCCATGCCTCTAGAAGAAGGAGACACATTCTTCTTTCAGCCGAGACCACTCAAAAATCTCGTGCTGGTGGATGAACTGGACAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS GCA 90 bp | TCTCTAAAGCCAAAATCCTCAAAGTGTTGGTGGAGATGGCAACAATaGCCTCGGGACACTGTTCAGAGGCAAAGCCCGATGCAAATTCCA | + |
Preference number: 5 (lower is better) Translates to: SLKPKSSKCWWRWQQ*PRDTVQRQSPMQIP Trigger: TGGAATTTGCATCGGGCTTTGCCTCTGAACAGTGTCCCGAGGGCATTGTTGCCATCTCCACCAACACTTTGAGGATTTTGGCTTTAGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS CCA 90 bp | GCTCCGTTTGGGCCAGAAAGAAGAACATGGACTTGGTCTTATGGGTaGCAGAGCAAACAAAAATCATTCCTCGTTCAGGGTCATCCAGGT | + |
Preference number: 5 (lower is better) Translates to: APFGPERRTWTWSYG*QSKQKSFLVQGHPG Trigger: ACCTGGATGACCCTGAACGAGGAATGATTTTTGTTTGCTCTGCCACCCATAAGACCAAGTCCATGTTCTTCTTTCTGGCCCAAACGGAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS CCA 90 bp | GTGGTCTCGGCTGAAAGAAGAATGTGTCTCCTTCTTCTAGAGGCATaGCAGACGAAAACTCAGGTTCTTCATCATCATCTCCGAGATGGG | + |
Preference number: 5 (lower is better) Translates to: VVSAERRMCLLLLEA*QTKTQVLHHHLRDG Trigger: CCCATCTCGGAGATGATGATGAAGAACCTGAGTTTTCGTCTGCCATGCCTCTAGAAGAAGGAGACACATTCTTCTTTCAGCCGAGACCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS-3UTR CAA 90 bp | CCGAAGCTCAGGGCCACACACTATGTTCAAGGAGCAGACTTCAGTGTCAACTGTATAACAGCTCTTCCTTaGGGATCCACAGCTAAGAAC | + |
Preference number: 5 (lower is better) Translates to: PKLRATHYVQGADFSVNCITALP*GSTAKN Trigger: GTTCTTAGCTGTGGATCCCAAAGGAAGAGCTGTTAT...ACAGTTGACACTGAAGTCTGCTCCTTGAACATAGTGTGTGGCCCTGAGCTTCGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS-3UTR CAA 90 bp | CGAAGCTCAGGGCCACACACTATGTTCAAGGAGCAGACTTCAGTGTCAACTGTACCGTTGTTCACAAGCTaGTACGTATACACAAAGCCC | + |
Preference number: 5 (lower is better) Translates to: RSSGPHTMFKEQTSVSTVPLFTS*YVYTKP Trigger: GGGCTTTGTGTATACGTACAAGCTTGTGAACAACGG...TACAGTTGACACTGAAGTCTGCTCCTTGAACATAGTGTGTGGCCCTGAGCTTCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS-3UTR CAA 90 bp | CAGCCTGGCTGCACCTTTGCTTGCCTCCCTTCATCTCTCAAAGCAACATTGTACTTACCCTGTGACCAATaGTCTGGATCCCAGATATGT | + |
Preference number: 5 (lower is better) Translates to: QPGCTFACLPSSLKATLYLPCDQ*SGSQIC Trigger: ACATATCTGGGATCCAGACAATTGGTCACAGGGTAA...GTACAATGTTGCTTTGAGAGATGAAGGGAGGCAAGCAAAGGTGCAGCCAGGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS-3UTR CAA 90 bp | CAGAAATTACACAATGCAGGGGTGGCTTTGGGAATAAGGAAAACTGTGTTCCACCGGTCCCACAGGGCTTaGTTTCCAGTGGGATCTTCA | + |
Preference number: 5 (lower is better) Translates to: QKLHNAGVALGIRKTVFHRSHRA*FPVGSS Trigger: TGAAGATCCCACTGGAAACAAAGCCCTGTGGGACCG...GTGGAACACAGTTTTCCTTATTCCCAAAGCCACCCCTGCATTGTGTAATTTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS-3UTR CAA 90 bp | GGGAATAAGGAAAACTGTGTTCCACACCGAAGCTCAGGGCCACACACTATGTTCACGTTCTTCTGCTTGTaGGGTTCCATGGAGTTGAAC | + |
Preference number: 5 (lower is better) Translates to: GNKENCVPHRSSGPHTMFTFFCL*GSMELN Trigger: GTTCAACTCCATGGAACCCAACAAGCAGAAGAACGT...GAACATAGTGTGTGGCCCTGAGCTTCGGTGTGGAACACAGTTTTCCTTATTCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS GCA 90 bp | AATCGTTTTCTTGCCGGGAGTCTTCCACTCATTAACTCTTTTATCTaGTCGTATGTGTCGGATGCCATCTGGATACACCTGCACCAGTGC | + |
Preference number: 5 (lower is better) Translates to: NRFLAGSLPLINSFI*SYVSDAIWIHLHQC Trigger: GCACTGGTGCAGGTGTATCCAGATGGCATCCGACACATACGAGCAGATAAAAGAGTTAATGAGTGGAAGACTCCCGGCAAGAAAACGATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS CCA 90 bp | GTCATCCAGGTCATTCCGTCTCCTGGGAATTGGACATCGGATGTCTaGCTGGTCACCAAAGTTCTTGTAGGTGATATAATTCTCAGAGCA | + |
Preference number: 5 (lower is better) Translates to: VIQVIPSPGNWTSDV*LVTKVLVGDIILRA Trigger: TGCTCTGAGAATTATATCACCTACAAGAACTTTGGTGACCAGCCAGACATCCGATGTCCAATTCCCAGGAGACGGAATGACCTGGATGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS-3UTR CAA 90 bp | CCACACCGAAGCTCAGGGCCACACACTATGTTCAAGGAGCAGACTTCAGTGTCAAACAACAATTTCCTGTaGCTTGGTTCCAGAGAAGTT | + |
Preference number: 5 (lower is better) Translates to: PHRSSGPHTMFKEQTSVSNNNFL*LGSREV Trigger: AACTTCTCTGGAACCAAGCAACAGGAAATTGTTGTT...TGACACTGAAGTCTGCTCCTTGAACATAGTGTGTGGCCCTGAGCTTCGGTGTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS-3UTR CAA 90 bp | GCCTCCCTTCATCTCTCAAAGCAACATTGTACAAAACTGTATTTACAGGAAAACACCAGAGTGTTCGCTTaGTGGGCCTCCAGGGGAGAG | + |
Preference number: 5 (lower is better) Translates to: ASLHLSKQHCTKLYLQENTRVFA*WASRGE Trigger: CTCTCCCCTGGAGGCCCACAAAGCGAACACTCTGGT...GTTTTCCTGTAAATACAGTTTTGTACAATGTTGCTTTGAGAGATGAAGGGAGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS-3UTR CAA 90 bp | CGAAGCTCAGGGCCACACACTATGTTCAAGGAGCAGACTTCAGTGTCAACTGTAACTGTAATAAGGAAGTaGCCATGTTCCTCCAAGGGT | + |
Preference number: 5 (lower is better) Translates to: RSSGPHTMFKEQTSVSTVTVIRK*PCSSKG Trigger: ACCCTTGGAGGAACATGGCAACTTCCTTATTACAGT...TACAGTTGACACTGAAGTCTGCTCCTTGAACATAGTGTGTGGCCCTGAGCTTCG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS-3UTR CAA 90 bp | TTGGGAATAAGGAAAACTGTGTTCCACACCGAAGCTCAGGGCCACACACTATGTAAGAAGAACATGGACTaGGTCTTATGGGTGGCAGAG | + |
Preference number: 5 (lower is better) Translates to: LGIRKTVFHTEAQGHTLCKKNMD*VLWVAE Trigger: CTCTGCCACCCATAAGACCAAGTCCATGTTCTTCTT...ACATAGTGTGTGGCCCTGAGCTTCGGTGTGGAACACAGTTTTCCTTATTCCCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS-3UTR CAA 90 bp | GCCTCCCTTCATCTCTCAAAGCAACATTGTACAAAACTGTATTTACAGGAAAACTTCTGTGAAGCCCCATaGAGCAAGCCCCGGTCCCAC | + |
Preference number: 5 (lower is better) Translates to: ASLHLSKQHCTKLYLQENFCEAP*SKPRSH Trigger: GTGGGACCGGGGCTTGCTCAATGGGGCTTCACAGAA...GTTTTCCTGTAAATACAGTTTTGTACAATGTTGCTTTGAGAGATGAAGGGAGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS GCA 90 bp | AAGGTCCAGTTCATAGAAAGTAAGTGTCTGCTGGGTATTGGCTGCTaGTTCCCCTGTTGGATCATTGTCTGCCTCCTCATAATCCATTTC | + |
Preference number: 5 (lower is better) Translates to: KVQFIESKCLLGIGC*FPCWIIVCLLIIHF Trigger: GAAATGGATTATGAGGAGGCAGACAATGATCCAACAGGGGAAGCAGCAGCCAATACCCAGCAGACACTTACTTTCTATGAACTGGACCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS CCA 90 bp | GCACTAATCATAACAGCTCTTCCTTTGGGATCCACAGCTAAGAACTaGCCAGGAACAATACGGCGACATCCGCTTTTGCCAAAAGTTTCT | + |
Preference number: 5 (lower is better) Translates to: ALIITALPLGSTAKN*PGTIRRHPLLPKVS Trigger: AGAAACTTTTGGCAAAAGCGGATGTCGCCGTATTGTTCCTGGCCAGTTCTTAGCTGTGGATCCCAAAGGAAGAGCTGTTATGATTAGTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS-3UTR CAA 90 bp | GAAATTACACAATGCAGGGGTGGCTTTGGGAATAAGGAAAACTGTGTTCCACACTTGGTTCCAGAGAAGTaGCCATGGATGGCAAAGCTG | + |
Preference number: 5 (lower is better) Translates to: EITQCRGGFGNKENCVPHLVPEK*PWMAKL Trigger: CAGCTTTGCCATCCATGGCAACTTCTCTGGAACCAA...GTGTGGAACACAGTTTTCCTTATTCCCAAAGCCACCCCTGCATTGTGTAATTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS-3UTR CAA 90 bp | TGCTTGCCTCCCTTCATCTCTCAAAGCAACATTGTACAAAACTGTATTTACAGGAGTGTCTGCTGGGTATaGGCTGCTGCTTCCCCTGTT | + |
Preference number: 5 (lower is better) Translates to: CLPPFISQSNIVQNCIYRSVCWV*AAASPV Trigger: AACAGGGGAAGCAGCAGCCAATACCCAGCAGACACT...CCTGTAAATACAGTTTTGTACAATGTTGCTTTGAGAGATGAAGGGAGGCAAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS-3UTR CAA 90 bp | GAAATTACACAATGCAGGGGTGGCTTTGGGAATAAGGAAAACTGTGTTCCACACTGTGGGGTGTCTTCATaGGCCAAATCAGCTATCTGG | + |
Preference number: 5 (lower is better) Translates to: EITQCRGGFGNKENCVPHCGVSS*AKSAIW Trigger: CCAGATAGCTGATTTGGCCAATGAAGACACCCCACA...GTGTGGAACACAGTTTTCCTTATTCCCAAAGCCACCCCTGCATTGTGTAATTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS-3UTR CAA 90 bp | GGGAATAAGGAAAACTGTGTTCCACACCGAAGCTCAGGGCCACACACTATGTTCAAAATCCTCAAAGTGTaGGTGGAGATGGCAACAATG | + |
Preference number: 5 (lower is better) Translates to: GNKENCVPHRSSGPHTMFKILKV*VEMATM Trigger: CATTGTTGCCATCTCCACCAACACTTTGAGGATTTT...GAACATAGTGTGTGGCCCTGAGCTTCGGTGTGGAACACAGTTTTCCTTATTCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS-3UTR CAA 90 bp | AATGCAGTCTTAAATACCACATCACTTCTGCTGTGTGGCAAAAGCCAGACACTGGCTTTCTCTGAGCTTTaGTGGCCTCAGTGTAGGCAT | + |
Preference number: 5 (lower is better) Translates to: NAVLNTTSLLLCGKSQTLAFSEL*WPQCRH Trigger: ATGCCTACACTGAGGCCACAAAAGCTCAGAGAAAGC...CAGTGTCTGGCTTTTGCCACACAGCAGAAGTGATGTGGTATTTAAGACTGCATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS TCA 90 bp | GAATTGGACATCGGATGTCTGGCTGGTCACCAAAGTTCTTGTAGGTaGTATAATTCTCAGAGCAGATTAGCACTCCACTTGGACCATCTG | + |
Preference number: 5 (lower is better) Translates to: ELDIGCLAGHQSSCR*YNSQSRLALHLDHL Trigger: CAGATGGTCCAAGTGGAGTGCTAATCTGCTCTGAGAATTATATCACCTACAAGAACTTTGGTGACCAGCCAGACATCCGATGTCCAATTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS-3UTR CAA 90 bp | CGAAGCTCAGGGCCACACACTATGTTCAAGGAGCAGACTTCAGTGTCAACTGTATCCGAGATGGGCAATTaGATACAAGTAATGATTTCC | + |
Preference number: 5 (lower is better) Translates to: RSSGPHTMFKEQTSVSTVSEMGN*IQVMIS Trigger: GGAAATCATTACTTGTATCAAATTGCCCATCTCGGA...TACAGTTGACACTGAAGTCTGCTCCTTGAACATAGTGTGTGGCCCTGAGCTTCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS-3UTR CAA 90 bp | GGGAAAGGGAAAACACCCTCTTTAATATCCATGAATAGTGGGGTTACATTTACATCATCCACCTCATCGTaGGTGTTAGGTGGGAGCCTC | + |
Preference number: 5 (lower is better) Translates to: GKGKTPSLISMNSGVTFTSSTSS*VLGGSL Trigger: GAGGCTCCCACCTAACACCAACGATGAGGTGGATGA...TGTAAATGTAACCCCACTATTCATGGATATTAAAGAGGGTGTTTTCCCTTTCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS-3UTR CAA 90 bp | TTTGCTTGCCTCCCTTCATCTCTCAAAGCAACATTGTACAAAACTGTATTTACAATGATTCTGACAGTGTaGTCCACCAGCCCCACAGCC | + |
Preference number: 5 (lower is better) Translates to: FACLPSSLKATLYKTVFTMILTV*STSPTA Trigger: GGCTGTGGGGCTGGTGGACAACACTGTCAGAATCAT...TGTAAATACAGTTTTGTACAATGTTGCTTTGAGAGATGAAGGGAGGCAAGCAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS-3UTR CAA 90 bp | ATTTACATGGTCAGTGAACTCATGTTCTATCTCCACAGCAAAGAACCAAGACACCAATCTTCACCAGTGTaGGAGAACCTACACACTGCC | + |
Preference number: 5 (lower is better) Translates to: IYMVSELMFYLHSKEPRHQSSPV*ENLHTA Trigger: GGCAGTGTGTAGGTTCTCCAACACTGGTGAAGATTG...GTGTCTTGGTTCTTTGCTGTGGAGATAGAACATGAGTTCACTGACCATGTAAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS-3UTR CAA 90 bp | AATAGTGGGGTTACATTTACATGGTCAGTGAACTCATGTTCTATCTCCACAGCACAATGGGAAGGCTACTaGATTGAAGACAGCACCAAG | + |
Preference number: 5 (lower is better) Translates to: NSGVTFTWSVNSCSISTAQWEGY*IEDSTK Trigger: CTTGGTGCTGTCTTCAATCAAGTAGCCTTCCCATTG...TGCTGTGGAGATAGAACATGAGTTCACTGACCATGTAAATGTAACCCCACTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS-3UTR CAA 90 bp | GGGAAAGGGAAAACACCCTCTTTAATATCCATGAATAGTGGGGTTACATTTACACTCACCACACAAATGTaGCCAAACTTGTCTGCCCCA | + |
Preference number: 5 (lower is better) Translates to: GKGKTPSLISMNSGVTFTLTTQM*PNLSAP Trigger: TGGGGCAGACAAGTTTGGCAACATTTGTGTGGTGAG...TGTAAATGTAACCCCACTATTCATGGATATTAAAGAGGGTGTTTTCCCTTTCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS-3UTR CAA 90 bp | GCCTCCCTTCATCTCTCAAAGCAACATTGTACAAAACTGTATTTACAGGAAAACGAGACGTTCTTCTGCTaGTTGGGTTCCATGGAGTTG | + |
Preference number: 5 (lower is better) Translates to: ASLHLSKQHCTKLYLQENETFFC*LGSMEL Trigger: CAACTCCATGGAACCCAACAAGCAGAAGAACGTCTC...GTTTTCCTGTAAATACAGTTTTGTACAATGTTGCTTTGAGAGATGAAGGGAGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS-3UTR CAA 90 bp | TTTAACAATGCAGTCTTAAATACCACATCACTTCTGCTGTGTGGCAAAAGCCAGACAGTATCAAAATACTaGAGGCGGATCTCGGTTACC | + |
Preference number: 5 (lower is better) Translates to: FNNAVLNTTSLLLCGKSQTVSKY*RRISVT Trigger: GGTAACCGAGATCCGCCTCAAGTATTTTGATACTGT...CTGGCTTTTGCCACACAGCAGAAGTGATGTGGTATTTAAGACTGCATTGTTAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS-3UTR CAA 90 bp | GCCTCCCTTCATCTCTCAAAGCAACATTGTACAAAACTGTATTTACAGGAAAACTCCAACTTCTCCCCGTaGTTCACAAGCTTGTACGTA | + |
Preference number: 5 (lower is better) Translates to: ASLHLSKQHCTKLYLQENSNFSP*FTSLYV Trigger: TACGTACAAGCTTGTGAACAACGGGGAGAAGTTGGA...GTTTTCCTGTAAATACAGTTTTGTACAATGTTGCTTTGAGAGATGAAGGGAGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS-3UTR CAA 90 bp | GCCTCCCTTCATCTCTCAAAGCAACATTGTACAAAACTGTATTTACAGGAAAACTTGGGTTCCATGGAGTaGAACTGCTCACAAAGGTCT | + |
Preference number: 5 (lower is better) Translates to: ASLHLSKQHCTKLYLQENLGSME*NCSQRS Trigger: AGACCTTTGTGAGCAGTTCAACTCCATGGAACCCAA...GTTTTCCTGTAAATACAGTTTTGTACAATGTTGCTTTGAGAGATGAAGGGAGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS-3UTR CAA 90 bp | AATGCAGTCTTAAATACCACATCACTTCTGCTGTGTGGCAAAAGCCAGACACTGTCTCAAACATATTCTTaGATGGCTGGTATTCCAAGA | + |
Preference number: 5 (lower is better) Translates to: NAVLNTTSLLLCGKSQTLSQTYS*MAGIPR Trigger: TCTTGGAATACCAGCCATCAAAGAATATGTTTGAGA...CAGTGTCTGGCTTTTGCCACACAGCAGAAGTGATGTGGTATTTAAGACTGCATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS-3UTR CAA 90 bp | AGCAAAGAAGTAAAAGATCCAGTTATTGTTCTAATTAGGCCTCAAGCCTTTCTCTTCACAATCGTTTTCTaGCCGGGAGTCTTCCACTCA | + |
Preference number: 5 (lower is better) Translates to: SKEVKDPVIVLIRPQAFLFTIVF*PGVFHS Trigger: TGAGTGGAAGACTCCCGGCAAGAAAACGATTGTGAA...GAGAAAGGCTTGAGGCCTAATTAGAACAATAACTGGATCTTTTACTTCTTTGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS-3UTR CAA 90 bp | ATTTACATGGTCAGTGAACTCATGTTCTATCTCCACAGCAAAGAACCAAGACACCCAGATGAAACTTTCTaGGACATCAGACACAATTAC | + |
Preference number: 5 (lower is better) Translates to: IYMVSELMFYLHSKEPRHPDETF*DIRHNY Trigger: GTAATTGTGTCTGATGTCCAAGAAAGTTTCATCTGG...GTGTCTTGGTTCTTTGCTGTGGAGATAGAACATGAGTTCACTGACCATGTAAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS CAA 90 bp | AGCCCCACAGCCAGGAACCGAGATCGCTGTTCTCCAGGGGGCACGTaGGCCAGACTCATGCACACCACATCTGCTGACATCTCTTTCCGC | + |
Preference number: 6 (lower is better) Translates to: SPTARNRDRCSPGGT*ARLMHTTSADISFR Trigger: GCGGAAAGAGATGTCAGCAGATGTGGTGTGCATGAGTCTGGCCAACGTGCCCCCTGGAGAACAGCGATCTCGGTTCCTGGCTGTGGGGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS CAA 72 bp | GCCAGGAACCGAGATCGCTGTTCTCCAGGGGGCACGTaGGCCAGACTCATGCACACCACATCTGCTGACATC | + |
Preference number: 6 (lower is better) Translates to: ARNRDRCSPGGT*ARLMHTTSADI Trigger: GATGTCAGCAGATGTGGTGTGCATGAGTCTGGCCAACGTGCCCCCTGGAGAACAGCGATCTCGGTTCCTGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS GCA 72 bp | ATCGCTGTTCTCCAGGGGGCACGTTGGCCAGACTCATaGACACCACATCTGCTGACATCTCTTTCCGCTCCG | + |
Preference number: 6 (lower is better) Translates to: IAVLQGARWPDS*TPHLLTSLSAP Trigger: CGGAGCGGAAAGAGATGTCAGCAGATGTGGTGTGCATGAGTCTGGCCAACGTGCCCCCTGGAGAACAGCGAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS CCA 72 bp | CCAGGAACCGAGATCGCTGTTCTCCAGGGGGCACGTTaGCCAGACTCATGCACACCACATCTGCTGACATCT | + |
Preference number: 6 (lower is better) Translates to: PGTEIAVLQGAR*PDSCTPHLLTS Trigger: AGATGTCAGCAGATGTGGTGTGCATGAGTCTGGCCAACGTGCCCCCTGGAGAACAGCGATCTCGGTTCCTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS CCA 72 bp | CGACACCAATCAGTACCCTCCCCTGGAATGGGGCAATaGCAGCAGGGACCTCTTCCACTGGAGTCTTGTGCA | + |
Preference number: 6 (lower is better) Translates to: RHQSVPSPGMGQ*QQGPLPLESCA Trigger: TGCACAAGACTCCAGTGGAAGAGGTCCCTGCTGCCATTGCCCCATTCCAGGGGAGGGTACTGATTGGTGTCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS CAA 72 bp | CAGTCTGATGGGTCGAGGGAGATGATTCTGACAGTGTaGTCCACCAGCCCCACAGCCAGGAACCGAGATCGC | + |
Preference number: 6 (lower is better) Translates to: QSDGSREMILTV*STSPTARNRDR Trigger: GCGATCTCGGTTCCTGGCTGTGGGGCTGGTGGACAACACTGTCAGAATCATCTCCCTCGACCCATCAGACTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS GCA 72 bp | CGAAAGCTCAGGTGGTCCCGTCCACAAAGAGGGGGATaGTCAGACCGCAGGTGCATTTCAACATGCTGGAAG | + |
Preference number: 6 (lower is better) Translates to: RKLRWSRPQRGG*SDRRCISTCWK Trigger: CTTCCAGCATGTTGAAATGCACCTGCGGTCTGAGCATCCCCCTCTTTGTGGACGGGACCACCTGAGCTTTCG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS CCA 72 bp | GGACCGGGGTCCCCTACCACAGGCTACATACAGCTGTaGGGTGTCTTCATTGGCCAAATCAGCTATCTGGCA | + |
Preference number: 6 (lower is better) Translates to: GPGSPTTGYIQL*GVFIGQISYLA Trigger: TGCCAGATAGCTGATTTGGCCAATGAAGACACCCCACAGCTGTATGTAGCCTGTGGTAGGGGACCCCGGTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS CAA 72 bp | GAAGCCCCATTGAGCAAGCCCCGGTCCCACAGGGCTTaGTTTCCAGTGGGATCTTCATCCACCTCATCGTTG | + |
Preference number: 6 (lower is better) Translates to: EAPLSKPRSHRA*FPVGSSSTSSL Trigger: CAACGATGAGGTGGATGAAGATCCCACTGGAAACAAAGCCCTGTGGGACCGGGGCTTGCTCAATGGGGCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS CAA 90 bp | GGCTGTAAACAGTCTGATGGGTCGAGGGAGATGATTCTGACAGTGTaGTCCACCAGCCCCACAGCCAGGAACCGAGATCGCTGTTCTCCA | + |
Preference number: 6 (lower is better) Translates to: GCKQSDGSREMILTV*STSPTARNRDRCSP Trigger: TGGAGAACAGCGATCTCGGTTCCTGGCTGTGGGGCTGGTGGACAACACTGTCAGAATCATCTCCCTCGACCCATCAGACTGTTTACAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS CAA 90 bp | GCCTTCTGTGAAGCCCCATTGAGCAAGCCCCGGTCCCACAGGGCTTaGTTTCCAGTGGGATCTTCATCCACCTCATCGTTGGTGTTAGGT | + |
Preference number: 6 (lower is better) Translates to: AFCEAPLSKPRSHRA*FPVGSSSTSSLVLG Trigger: ACCTAACACCAACGATGAGGTGGATGAAGATCCCACTGGAAACAAAGCCCTGTGGGACCGGGGCTTGCTCAATGGGGCTTCACAGAAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS GCA 72 bp | TGGGAGGTTTTCATTGAGGAATGCTGCTGCCATTTCTaGAGCCAACTCCCGCTCATCCTCCCCTGCTGCTTC | + |
Preference number: 6 (lower is better) Translates to: WEVFIEECCCHF*SQLPLILPCCF Trigger: GAAGCAGCAGGGGAGGATGAGCGGGAGTTGGCTGCAGAAATGGCAGCAGCATTCCTCAATGAAAACCTCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS GCA 72 bp | GGTTCATCACCCGAATCACAGAGGCCCACTGCCCATTaGCAGCCTTGGGAGCTCCAAAAATGGATTCTGGGA | + |
Preference number: 6 (lower is better) Translates to: GSSPESQRPTAH*QPWELQKWILG Trigger: TCCCAGAATCCATTTTTGGAGCTCCCAAGGCTGGCAATGGGCAGTGGGCCTCTGTGATTCGGGTGATGAACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS GCA 72 bp | TCCCGTCCACAAAGAGGGGGATGCTCAGACCGCAGGTaGATTTCAACATGCTGGAAGAAGTCATGGTCCTCG | + |
Preference number: 6 (lower is better) Translates to: SRPQRGGCSDRR*ISTCWKKSWSS Trigger: CGAGGACCATGACTTCTTCCAGCATGTTGAAATGCACCTGCGGTCTGAGCATCCCCCTCTTTGTGGACGGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS CCA 72 bp | AGCTCTCCCCCAGTCAGGGCGATCACCACTTGTCGCTaGTTCACTGCACACTTCACAATCGTTTTCTTGCCG | + |
Preference number: 6 (lower is better) Translates to: SSPPVRAITTCR*FTAHFTIVFLP Trigger: CGGCAAGAAAACGATTGTGAAGTGTGCAGTGAACCAGCGACAAGTGGTGATCGCCCTGACTGGGGGAGAGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS CCA 72 bp | CCCCTGCCACAGATCGAGGGCTCAGTATCAAGTCCTTaGCAACACCCACCAGCACATACCAATCTTCACCAG | + |
Preference number: 6 (lower is better) Translates to: PLPQIEGSVSSP*QHPPAHTNLHQ Trigger: CTGGTGAAGATTGGTATGTGCTGGTGGGTGTTGCCAAGGACTTGATACTGAGCCCTCGATCTGTGGCAGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS CCA 72 bp | CTGGAATGGGGCAATGGCAGCAGGGACCTCTTCCACTaGAGTCTTGTGCAGAAACTCCAACTTCTCCCCGTT | + |
Preference number: 6 (lower is better) Translates to: LEWGNGSRDLFH*SLVQKLQLLPV Trigger: AACGGGGAGAAGTTGGAGTTTCTGCACAAGACTCCAGTGGAAGAGGTCCCTGCTGCCATTGCCCCATTCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS CAA 72 bp | CCCCCTGCCACAGATCGAGGGCTCAGTATCAAGTCCTaGGCAACACCCACCAGCACATACCAATCTTCACCA | + |
Preference number: 6 (lower is better) Translates to: PPATDRGLSIKS*ATPTSTYQSSP Trigger: TGGTGAAGATTGGTATGTGCTGGTGGGTGTTGCCAAGGACTTGATACTGAGCCCTCGATCTGTGGCAGGGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS CAA 90 bp | CATCTCGAAATAGACCAGCTCTCCCCCAGTCAGGGCGATCACCACTaGTCGCTGGTTCACTGCACACTTCACAATCGTTTTCTTGCCGGG | + |
Preference number: 6 (lower is better) Translates to: HLEIDQLSPSQGDHH*SLVHCTLHNRFLAG Trigger: CCCGGCAAGAAAACGATTGTGAAGTGTGCAGTGAACCAGCGACAAGTGGTGATCGCCCTGACTGGGGGAGAGCTGGTCTATTTCGAGATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS CAA 90 bp | CCCTGGATAGGGTTCATCACCCGAATCACAGAGGCCCACTGCCCATaGCCAGCCTTGGGAGCTCCAAAAATGGATTCTGGGAGGTTTTCA | + |
Preference number: 6 (lower is better) Translates to: PWIGFITRITEAHCP*PALGAPKMDSGRFS Trigger: TGAAAACCTCCCAGAATCCATTTTTGGAGCTCCCAAGGCTGGCAATGGGCAGTGGGCCTCTGTGATTCGGGTGATGAACCCTATCCAGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS TCA 72 bp | GCTTGGTTCCAGAGAAGTTGCCATGGATGGCAAAGCTaGTGCCAGTGGCCCGCTGTAAGGTCAGGTTGTACA | + |
Preference number: 6 (lower is better) Translates to: AWFQRSCHGWQS*CQWPAVRSGCT Trigger: TGTACAACCTGACCTTACAGCGGGCCACTGGCATCAGCTTTGCCATCCATGGCAACTTCTCTGGAACCAAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS GCA 72 bp | CCCAGTCAGGGCGATCACCACTTGTCGCTGGTTCACTaGACACTTCACAATCGTTTTCTTGCCGGGAGTCTT | + |
Preference number: 6 (lower is better) Translates to: PSQGDHHLSLVH*TLHNRFLAGSL Trigger: AAGACTCCCGGCAAGAAAACGATTGTGAAGTGTGCAGTGAACCAGCGACAAGTGGTGATCGCCCTGACTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS GCA 72 bp | TGGATAGGGTTCATCACCCGAATCACAGAGGCCCACTaGCCATTGCCAGCCTTGGGAGCTCCAAAAATGGAT | + |
Preference number: 6 (lower is better) Translates to: WIGFITRITEAH*PLPALGAPKMD Trigger: ATCCATTTTTGGAGCTCCCAAGGCTGGCAATGGGCAGTGGGCCTCTGTGATTCGGGTGATGAACCCTATCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS GCA 72 bp | GGTGGGGTTCGGTCCAGCTCCTCAGAGACGTTCTTCTaGTTGTTGGGTTCCATGGAGTTGAACTGCTCACAA | + |
Preference number: 6 (lower is better) Translates to: GGVRSSSSETFF*LLGSMELNCSQ Trigger: TTGTGAGCAGTTCAACTCCATGGAACCCAACAAGCAGAAGAACGTCTCTGAGGAGCTGGACCGAACCCCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS CCA 72 bp | CATCTTCAATGTGCCGACGGACTGTCCAGACAGCATTaGGGTTACCAGGGAGCTCAGAAACAGCCATTTCCG | + |
Preference number: 6 (lower is better) Translates to: HLQCADGLSRQH*GYQGAQKQPFP Trigger: CGGAAATGGCTGTTTCTGAGCTCCCTGGTAACCCCAATGCTGTCTGGACAGTCCGTCGGCACATTGAAGATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS CCA 72 bp | TATAGACAAGGGACTCTGAGCCTCCAGGGATCAGTGTaGTCTTCTGTAGCGACAGCACGGTCTCTCCAACGT | + |
Preference number: 6 (lower is better) Translates to: YRQGTLSLQGSV*SSVATARSLQR Trigger: ACGTTGGAGAGACCGTGCTGTCGCTACAGAAGACCACACTGATCCCTGGAGGCTCAGAGTCCCTTGTCTATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS CAA 72 bp | GGGGTTCGGTCCAGCTCCTCAGAGACGTTCTTCTGCTaGTTGGGTTCCATGGAGTTGAACTGCTCACAAAGG | + |
Preference number: 6 (lower is better) Translates to: GVRSSSSETFFC*LGSMELNCSQR Trigger: CCTTTGTGAGCAGTTCAACTCCATGGAACCCAACAAGCAGAAGAACGTCTCTGAGGAGCTGGACCGAACCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS CAA 90 bp | ACACCTGCACCAGTGCATCATCTCCTAACAAGGAGCAGGACAAGGTaGGAGTGGTGCCCAAGAAGCCAGAGTCAGTCACTTCTTCCACAG | + |
Preference number: 6 (lower is better) Translates to: TPAPVHHLLTRSRTR*EWCPRSQSQSLLPQ Trigger: CTGTGGAAGAAGTGACTGACTCTGGCTTCTTGGGCACCACTCCAACCTTGTCCTGCTCCTTGTTAGGAGATGATGCACTGGTGCAGGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS CAA 90 bp | TACACAAAGCCCCCTGCCACAGATCGAGGGCTCAGTATCAAGTCCTaGGCAACACCCACCAGCACATACCAATCTTCACCAGTGTTGGAG | + |
Preference number: 6 (lower is better) Translates to: YTKPPATDRGLSIKS*ATPTSTYQSSPVLE Trigger: CTCCAACACTGGTGAAGATTGGTATGTGCTGGTGGGTGTTGCCAAGGACTTGATACTGAGCCCTCGATCTGTGGCAGGGGGCTTTGTGTA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS TCA 72 bp | ATAGGATTCTCAAATCCCACGTCTACGCCAACCACGTaGTACACCAGAGTGTTCGCTTTGTGGGCCTCCAGG | + |
Preference number: 6 (lower is better) Translates to: IGFSNPTSTPTT*YTRVFALWASR Trigger: CCTGGAGGCCCACAAAGCGAACACTCTGGTGTATCACGTGGTTGGCGTAGACGTGGGATTTGAGAATCCTAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS TCA 72 bp | CCGATGCAAATTCCAGGGTCTCATAAGACAGAGGGGTaGGATGGAAGCGAGACTGGTAAGAGTAGCTCAGCC | + |
Preference number: 6 (lower is better) Translates to: PMQIPGSHKTEG*DGSETGKSSSA Trigger: GGCTGAGCTACTCTTACCAGTCTCGCTTCCATCTCACCCCTCTGTCTTATGAGACCCTGGAATTTGCATCGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS GCA 72 bp | CCAAAATCCTCAAAGTGTTGGTGGAGATGGCAACAATaGCCTCGGGACACTGTTCAGAGGCAAAGCCCGATG | + |
Preference number: 6 (lower is better) Translates to: PKSSKCWWRWQQ*PRDTVQRQSPM Trigger: CATCGGGCTTTGCCTCTGAACAGTGTCCCGAGGGCATTGTTGCCATCTCCACCAACACTTTGAGGATTTTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS CCA 72 bp | GTCCCACCCATTTCCACAATACATAGAGACTCAGGCTaGGCTGGGAGAGCCTGCATACTCAGAGGCTGTAAA | + |
Preference number: 6 (lower is better) Translates to: VPPISTIHRDSG*AGRACILRGCK Trigger: TTTACAGCCTCTGAGTATGCAGGCTCTCCCAGCCCAGCCTGAGTCTCTATGTATTGTGGAAATGGGTGGGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS CAA 72 bp | GTTCAGGGTCATCCAGGTCATTCCGTCTCCTGGGAATaGGACATCGGATGTCTGGCTGGTCACCAAAGTTCT | + |
Preference number: 6 (lower is better) Translates to: VQGHPGHSVSWE*DIGCLAGHQSS Trigger: AGAACTTTGGTGACCAGCCAGACATCCGATGTCCAATTCCCAGGAGACGGAATGACCTGGATGACCCTGAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS CAA 72 bp | TCATCTTCAATGTGCCGACGGACTGTCCAGACAGCATaGGGGTTACCAGGGAGCTCAGAAACAGCCATTTCC | + |
Preference number: 6 (lower is better) Translates to: SSSMCRRTVQTA*GLPGSSETAIS Trigger: GGAAATGGCTGTTTCTGAGCTCCCTGGTAACCCCAATGCTGTCTGGACAGTCCGTCGGCACATTGAAGATGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS CAA 72 bp | ATAGACCAGCTCTCCCCCAGTCAGGGCGATCACCACTaGTCGCTGGTTCACTGCACACTTCACAATCGTTTT | + |
Preference number: 6 (lower is better) Translates to: IDQLSPSQGDHH*SLVHCTLHNRF Trigger: AAAACGATTGTGAAGTGTGCAGTGAACCAGCGACAAGTGGTGATCGCCCTGACTGGGGGAGAGCTGGTCTAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS CAA 72 bp | GCAACACCCACCAGCACATACCAATCTTCACCAGTGTaGGAGAACCTACACACTGCCACACTAAAGGCTGCC | + |
Preference number: 6 (lower is better) Translates to: ATPTSTYQSSPV*ENLHTATLKAA Trigger: GGCAGCCTTTAGTGTGGCAGTGTGTAGGTTCTCCAACACTGGTGAAGATTGGTATGTGCTGGTGGGTGTTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS CAA 90 bp | GCATCAAACTCATCTTCAATGTGCCGACGGACTGTCCAGACAGCATaGGGGTTACCAGGGAGCTCAGAAACAGCCATTTCCGACACCTCA | + |
Preference number: 6 (lower is better) Translates to: ASNSSSMCRRTVQTA*GLPGSSETAISDTS Trigger: TGAGGTGTCGGAAATGGCTGTTTCTGAGCTCCCTGGTAACCCCAATGCTGTCTGGACAGTCCGTCGGCACATTGAAGATGAGTTTGATGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS CAA 90 bp | TTGCCAGCCTTGGGAGCTCCAAAAATGGATTCTGGGAGGTTTTCATaGAGGAATGCTGCTGCCATTTCTGCAGCCAACTCCCGCTCATCC | + |
Preference number: 6 (lower is better) Translates to: LPALGAPKMDSGRFS*RNAAAISAANSRSS Trigger: GGATGAGCGGGAGTTGGCTGCAGAAATGGCAGCAGCATTCCTCAATGAAAACCTCCCAGAATCCATTTTTGGAGCTCCCAAGGCTGGCAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS CAA 90 bp | GGAGTCTTGTGCAGAAACTCCAACTTCTCCCCGTTGTTCACAAGCTaGTACGTATACACAAAGCCCCCTGCCACAGATCGAGGGCTCAGT | + |
Preference number: 6 (lower is better) Translates to: GVLCRNSNFSPLFTS*YVYTKPPATDRGLS Trigger: ACTGAGCCCTCGATCTGTGGCAGGGGGCTTTGTGTATACGTACAAGCTTGTGAACAACGGGGAGAAGTTGGAGTTTCTGCACAAGACTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS CAA 90 bp | TCAGGTGGGGTTCGGTCCAGCTCCTCAGAGACGTTCTTCTGCTTGTaGGGTTCCATGGAGTTGAACTGCTCACAAAGGTCTCCATCAATC | + |
Preference number: 6 (lower is better) Translates to: SGGVRSSSSETFFCL*GSMELNCSQRSPSI Trigger: GATTGATGGAGACCTTTGTGAGCAGTTCAACTCCATGGAACCCAACAAGCAGAAGAACGTCTCTGAGGAGCTGGACCGAACCCCACCTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS CAA 90 bp | ACTTCAGGTGGGGTTCGGTCCAGCTCCTCAGAGACGTTCTTCTGCTaGTTGGGTTCCATGGAGTTGAACTGCTCACAAAGGTCTCCATCA | + |
Preference number: 6 (lower is better) Translates to: TSGGVRSSSSETFFC*LGSMELNCSQRSPS Trigger: TGATGGAGACCTTTGTGAGCAGTTCAACTCCATGGAACCCAACAAGCAGAAGAACGTCTCTGAGGAGCTGGACCGAACCCCACCTGAAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS CAA 90 bp | AAGTCCTTGGCAACACCCACCAGCACATACCAATCTTCACCAGTGTaGGAGAACCTACACACTGCCACACTAAAGGCTGCCTCGTTTTGC | + |
Preference number: 6 (lower is better) Translates to: KSLATPTSTYQSSPV*ENLHTATLKAASFC Trigger: GCAAAACGAGGCAGCCTTTAGTGTGGCAGTGTGTAGGTTCTCCAACACTGGTGAAGATTGGTATGTGCTGGTGGGTGTTGCCAAGGACTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS GCA 72 bp | AACCTACACACTGCCACACTAAAGGCTGCCTCGTTTTaGTCCAACTGGACAAGGTCTAGTGTATTCCCCTGG | + |
Preference number: 6 (lower is better) Translates to: NLHTATLKAASF*SNWTRSSVFPW Trigger: CCAGGGGAATACACTAGACCTTGTCCAGTTGGAGCAAAACGAGGCAGCCTTTAGTGTGGCAGTGTGTAGGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS GCA 72 bp | GTTGTTCACAAGCTTGTACGTATACACAAAGCCCCCTaGCACAGATCGAGGGCTCAGTATCAAGTCCTTGGC | + |
Preference number: 6 (lower is better) Translates to: VVHKLVRIHKAP*HRSRAQYQVLG Trigger: GCCAAGGACTTGATACTGAGCCCTCGATCTGTGGCAGGGGGCTTTGTGTATACGTACAAGCTTGTGAACAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS CCA 72 bp | ACAATTTCCTGTTGCTTGGTTCCAGAGAAGTTGCCATaGATGGCAAAGCTGATGCCAGTGGCCCGCTGTAAG | + |
Preference number: 6 (lower is better) Translates to: TISCCLVPEKLP*MAKLMPVARCK Trigger: CTTACAGCGGGCCACTGGCATCAGCTTTGCCATCCATGGCAACTTCTCTGGAACCAAGCAACAGGAAATTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS CCA 72 bp | TTCAGGGTCATCCAGGTCATTCCGTCTCCTGGGAATTaGACATCGGATGTCTGGCTGGTCACCAAAGTTCTT | + |
Preference number: 6 (lower is better) Translates to: FRVIQVIPSPGN*TSDVWLVTKVL Trigger: AAGAACTTTGGTGACCAGCCAGACATCCGATGTCCAATTCCCAGGAGACGGAATGACCTGGATGACCCTGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS CCA 72 bp | CATCATCTCCTAACAAGGAGCAGGACAAGGTTGGAGTaGTGCCCAAGAAGCCAGAGTCAGTCACTTCTTCCA | + |
Preference number: 6 (lower is better) Translates to: HHLLTRSRTRLE*CPRSQSQSLLP Trigger: TGGAAGAAGTGACTGACTCTGGCTTCTTGGGCACCACTCCAACCTTGTCCTGCTCCTTGTTAGGAGATGATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS CCA 72 bp | TTTTGCTCCAACTGGACAAGGTCTAGTGTATTCCCCTaGATAGGGTTCATCACCCGAATCACAGAGGCCCAC | + |
Preference number: 6 (lower is better) Translates to: FCSNWTRSSVFP*IGFITRITEAH Trigger: GTGGGCCTCTGTGATTCGGGTGATGAACCCTATCCAGGGGAATACACTAGACCTTGTCCAGTTGGAGCAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS CAA 90 bp | ACCTCTTCCACTGGAGTCTTGTGCAGAAACTCCAACTTCTCCCCGTaGTTCACAAGCTTGTACGTATACACAAAGCCCCCTGCCACAGAT | + |
Preference number: 6 (lower is better) Translates to: TSSTGVLCRNSNFSP*FTSLYVYTKPPATD Trigger: ATCTGTGGCAGGGGGCTTTGTGTATACGTACAAGCTTGTGAACAACGGGGAGAAGTTGGAGTTTCTGCACAAGACTCCAGTGGAAGAGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS CCA 72 bp | ATAACAGCTCTTCCTTTGGGATCCACAGCTAAGAACTaGCCAGGAACAATACGGCGACATCCGCTTTTGCCA | + |
Preference number: 6 (lower is better) Translates to: ITALPLGSTAKN*PGTIRRHPLLP Trigger: TGGCAAAAGCGGATGTCGCCGTATTGTTCCTGGCCAGTTCTTAGCTGTGGATCCCAAAGGAAGAGCTGTTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS CAA 72 bp | TGCAGAAACTCCAACTTCTCCCCGTTGTTCACAAGCTaGTACGTATACACAAAGCCCCCTGCCACAGATCGA | + |
Preference number: 6 (lower is better) Translates to: CRNSNFSPLFTS*YVYTKPPATDR Trigger: TCGATCTGTGGCAGGGGGCTTTGTGTATACGTACAAGCTTGTGAACAACGGGGAGAAGTTGGAGTTTCTGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS CAA 72 bp | GCTTTGTTTCCAGTGGGATCTTCATCCACCTCATCGTaGGTGTTAGGTGGGAGCCTCACCACACAAATGTTG | + |
Preference number: 6 (lower is better) Translates to: ALFPVGSSSTSS*VLGGSLTTQML Trigger: CAACATTTGTGTGGTGAGGCTCCCACCTAACACCAACGATGAGGTGGATGAAGATCCCACTGGAAACAAAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS TCA 72 bp | AGAGGCTGTCCAGTTCATCCACCAGCACGAGATTTTTaGGTGGTCTCGGCTGAAAGAAGAATGTGTCTCCTT | + |
Preference number: 6 (lower is better) Translates to: RGCPVHPPARDF*VVSAERRMCLL Trigger: AAGGAGACACATTCTTCTTTCAGCCGAGACCACTCAAAAATCTCGTGCTGGTGGATGAACTGGACAGCCTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS GCA 72 bp | CTTGCCGGGAGTCTTCCACTCATTAACTCTTTTATCTaGTCGTATGTGTCGGATGCCATCTGGATACACCTG | + |
Preference number: 6 (lower is better) Translates to: LAGSLPLINSFI*SYVSDAIWIHL Trigger: CAGGTGTATCCAGATGGCATCCGACACATACGAGCAGATAAAAGAGTTAATGAGTGGAAGACTCCCGGCAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS GCA 72 bp | ATACCAATCTTCACCAGTGTTGGAGAACCTACACACTaGCACACTAAAGGCTGCCTCGTTTTGCTCCAACTG | + |
Preference number: 6 (lower is better) Translates to: IPIFTSVGEPTH*HTKGCLVLLQL Trigger: CAGTTGGAGCAAAACGAGGCAGCCTTTAGTGTGGCAGTGTGTAGGTTCTCCAACACTGGTGAAGATTGGTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS CCA 72 bp | GCTGTCCAGTTCATCCACCAGCACGAGATTTTTGAGTaGTCTCGGCTGAAAGAAGAATGTGTCTCCTTCTTC | + |
Preference number: 6 (lower is better) Translates to: AVQFIHQHEIFE*SRLKEECVSFF Trigger: GAAGAAGGAGACACATTCTTCTTTCAGCCGAGACCACTCAAAAATCTCGTGCTGGTGGATGAACTGGACAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS CCA 72 bp | TCTCTAAAGCCAAAATCCTCAAAGTGTTGGTGGAGATaGCAACAATGCCCTCGGGACACTGTTCAGAGGCAA | + |
Preference number: 6 (lower is better) Translates to: SLKPKSSKCWWR*QQCPRDTVQRQ Trigger: TTGCCTCTGAACAGTGTCCCGAGGGCATTGTTGCCATCTCCACCAACACTTTGAGGATTTTGGCTTTAGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS CCA 72 bp | CAAGCTTCTCTAAAGCCAAAATCCTCAAAGTGTTGGTaGAGATGGCAACAATGCCCTCGGGACACTGTTCAG | + |
Preference number: 6 (lower is better) Translates to: QASLKPKSSKCW*RWQQCPRDTVQ Trigger: CTGAACAGTGTCCCGAGGGCATTGTTGCCATCTCCACCAACACTTTGAGGATTTTGGCTTTAGAGAAGCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS CCA 72 bp | AGGGTGGATGACAAACTTCCTGGGTGTGTACTGCAATaGGAAGGCTACTTGATTGAAGACAGCACCAAGCTT | + |
Preference number: 6 (lower is better) Translates to: RVDDKLPGCVLQ*EGYLIEDSTKL Trigger: AAGCTTGGTGCTGTCTTCAATCAAGTAGCCTTCCCATTGCAGTACACACCCAGGAAGTTTGTCATCCACCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS CAA 72 bp | ACTGGAGTCTTGTGCAGAAACTCCAACTTCTCCCCGTaGTTCACAAGCTTGTACGTATACACAAAGCCCCCT | + |
Preference number: 6 (lower is better) Translates to: TGVLCRNSNFSP*FTSLYVYTKPP Trigger: AGGGGGCTTTGTGTATACGTACAAGCTTGTGAACAACGGGGAGAAGTTGGAGTTTCTGCACAAGACTCCAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS CAA 90 bp | TCCAGCTCCTCAGAGACGTTCTTCTGCTTGTTGGGTTCCATGGAGTaGAACTGCTCACAAAGGTCTCCATCAATCACATTCTTAACAGGG | + |
Preference number: 6 (lower is better) Translates to: SSSSETFFCLLGSME*NCSQRSPSITFLTG Trigger: CCCTGTTAAGAATGTGATTGATGGAGACCTTTGTGAGCAGTTCAACTCCATGGAACCCAACAAGCAGAAGAACGTCTCTGAGGAGCTGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS CAA 90 bp | GAGCTGGTTCTCGTTACGCTTGTATCGAACCCAGATGAAACTTTCTaGGACATCAGACACAATTACCCTGTGACCAATTGTCTGGATCCC | + |
Preference number: 6 (lower is better) Translates to: ELVLVTLVSNPDETF*DIRHNYPVTNCLDP Trigger: GGGATCCAGACAATTGGTCACAGGGTAATTGTGTCTGATGTCCAAGAAAGTTTCATCTGGGTTCGATACAAGCGTAACGAGAACCAGCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS TCA 72 bp | TCCTGGGTGTGTACTGCAATGGGAAGGCTACTTGATTaGAGACAGCACCAAGCTTCTCTAAAGCCAAAATCC | + |
Preference number: 6 (lower is better) Translates to: SWVCTAMGRLLD*RQHQASLKPKS Trigger: GGATTTTGGCTTTAGAGAAGCTTGGTGCTGTCTTCAATCAAGTAGCCTTCCCATTGCAGTACACACCCAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS GCA 72 bp | TTCATAGAAAGTAAGTGTCTGCTGGGTATTGGCTGCTaGTTCCCCTGTTGGATCATTGTCTGCCTCCTCATA | + |
Preference number: 6 (lower is better) Translates to: FIESKCLLGIGC*FPCWIIVCLLI Trigger: TATGAGGAGGCAGACAATGATCCAACAGGGGAAGCAGCAGCCAATACCCAGCAGACACTTACTTTCTATGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS CCA 72 bp | GGGCCAGAAAGAAGAACATGGACTTGGTCTTATGGGTaGCAGAGCAAACAAAAATCATTCCTCGTTCAGGGT | + |
Preference number: 6 (lower is better) Translates to: GPERRTWTWSYG*QSKQKSFLVQG Trigger: ACCCTGAACGAGGAATGATTTTTGTTTGCTCTGCCACCCATAAGACCAAGTCCATGTTCTTCTTTCTGGCCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS CCA 72 bp | CCTGCTCCGTTTGGGCCAGAAAGAAGAACATGGACTTaGTCTTATGGGTGGCAGAGCAAACAAAAATCATTC | + |
Preference number: 6 (lower is better) Translates to: PAPFGPERRTWT*SYGWQSKQKSF Trigger: GAATGATTTTTGTTTGCTCTGCCACCCATAAGACCAAGTCCATGTTCTTCTTTCTGGCCCAAACGGAGCAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS CCA 72 bp | TATCTCCCTGCTCCGTTTGGGCCAGAAAGAAGAACATaGACTTGGTCTTATGGGTGGCAGAGCAAACAAAAA | + |
Preference number: 6 (lower is better) Translates to: YLPAPFGPERRT*TWSYGWQSKQK Trigger: TTTTTGTTTGCTCTGCCACCCATAAGACCAAGTCCATGTTCTTCTTTCTGGCCCAAACGGAGCAGGGAGATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS CAA 72 bp | CCCTGCTCCGTTTGGGCCAGAAAGAAGAACATGGACTaGGTCTTATGGGTGGCAGAGCAAACAAAAATCATT | + |
Preference number: 6 (lower is better) Translates to: PCSVWARKKNMD*VLWVAEQTKII Trigger: AATGATTTTTGTTTGCTCTGCCACCCATAAGACCAAGTCCATGTTCTTCTTTCTGGCCCAAACGGAGCAGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS CAA 90 bp | AAGATATCTCCCTGCTCCGTTTGGGCCAGAAAGAAGAACATGGACTaGGTCTTATGGGTGGCAGAGCAAACAAAAATCATTCCTCGTTCA | + |
Preference number: 6 (lower is better) Translates to: KISPCSVWARKKNMD*VLWVAEQTKIIPRS Trigger: TGAACGAGGAATGATTTTTGTTTGCTCTGCCACCCATAAGACCAAGTCCATGTTCTTCTTTCTGGCCCAAACGGAGCAGGGAGATATCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS CAA 90 bp | ATCACCACTTGTCGCTGGTTCACTGCACACTTCACAATCGTTTTCTaGCCGGGAGTCTTCCACTCATTAACTCTTTTATCTGCTCGTATG | + |
Preference number: 6 (lower is better) Translates to: ITTCRWFTAHFTIVF*PGVFHSLTLLSARM Trigger: CATACGAGCAGATAAAAGAGTTAATGAGTGGAAGACTCCCGGCAAGAAAACGATTGTGAAGTGTGCAGTGAACCAGCGACAAGTGGTGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS TCA 72 bp | CAGAGACGTTCTTCTGCTTGTTGGGTTCCATGGAGTTaGACTGCTCACAAAGGTCTCCATCAATCACATTCT | + |
Preference number: 6 (lower is better) Translates to: QRRSSACWVPWS*TAHKGLHQSHS Trigger: AGAATGTGATTGATGGAGACCTTTGTGAGCAGTTCAACTCCATGGAACCCAACAAGCAGAAGAACGTCTCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS GCA 72 bp | TCCAAAATCTTCCCACGGGAAACAACAATTTCCTGTTaGTTGGTTCCAGAGAAGTTGCCATGGATGGCAAAG | + |
Preference number: 6 (lower is better) Translates to: SKIFPRETTISC*LVPEKLPWMAK Trigger: CTTTGCCATCCATGGCAACTTCTCTGGAACCAAGCAACAGGAAATTGTTGTTTCCCGTGGGAAGATTTTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS CCA 72 bp | GTCATTCCGTCTCCTGGGAATTGGACATCGGATGTCTaGCTGGTCACCAAAGTTCTTGTAGGTGATATAATT | + |
Preference number: 6 (lower is better) Translates to: VIPSPGNWTSDV*LVTKVLVGDII Trigger: AATTATATCACCTACAAGAACTTTGGTGACCAGCCAGACATCCGATGTCCAATTCCCAGGAGACGGAATGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS CAA 72 bp | CTCCAAAATCTTCCCACGGGAAACAACAATTTCCTGTaGCTTGGTTCCAGAGAAGTTGCCATGGATGGCAAA | + |
Preference number: 6 (lower is better) Translates to: LQNLPTGNNNFL*LGSREVAMDGK Trigger: TTTGCCATCCATGGCAACTTCTCTGGAACCAAGCAACAGGAAATTGTTGTTTCCCGTGGGAAGATTTTGGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS CAA 72 bp | ACACCAAATACTTCAACAGTGAGGAGGGTATGTACTTaGCCAGTGTTAGGGTCTGGGCGTAGTAACTCCAAA | + |
Preference number: 6 (lower is better) Translates to: TPNTSTVRRVCT*PVLGSGRSNSK Trigger: TTTGGAGTTACTACGCCCAGACCCTAACACTGGCAAAGTACATACCCTCCTCACTGTTGAAGTATTTGGTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS CAA 72 bp | CACATAGCAGCAGCAACAGGCACAGTATCAAAATACTaGAGGCGGATCTCGGTTACCATATCTTCATCTGTC | + |
Preference number: 6 (lower is better) Translates to: HIAAATGTVSKY*RRISVTISSSV Trigger: GACAGATGAAGATATGGTAACCGAGATCCGCCTCAAGTATTTTGATACTGTGCCTGTTGCTGCTGCTATGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS CAA 90 bp | ACCAATTTCTGCTTCTCAATTGCACTAATCATAACAGCTCTTCCTTaGGGATCCACAGCTAAGAACTGGCCAGGAACAATACGGCGACAT | + |
Preference number: 6 (lower is better) Translates to: TNFCFSIALIITALP*GSTAKNWPGTIRRH Trigger: ATGTCGCCGTATTGTTCCTGGCCAGTTCTTAGCTGTGGATCCCAAAGGAAGAGCTGTTATGATTAGTGCAATTGAGAAGCAGAAATTGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS CCA 72 bp | GTTTGGGCCAGAAAGAAGAACATGGACTTGGTCTTATaGGTGGCAGAGCAAACAAAAATCATTCCTCGTTCA | + |
Preference number: 6 (lower is better) Translates to: VWARKKNMDLVL*VAEQTKIIPRS Trigger: TGAACGAGGAATGATTTTTGTTTGCTCTGCCACCCATAAGACCAAGTCCATGTTCTTCTTTCTGGCCCAAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS CCA 72 bp | GCTGAAAGAAGAATGTGTCTCCTTCTTCTAGAGGCATaGCAGACGAAAACTCAGGTTCTTCATCATCATCTC | + |
Preference number: 6 (lower is better) Translates to: AERRMCLLLLEA*QTKTQVLHHHL Trigger: GAGATGATGATGAAGAACCTGAGTTTTCGTCTGCCATGCCTCTAGAAGAAGGAGACACATTCTTCTTTCAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS CAA 72 bp | TGTCGCTGGTTCACTGCACACTTCACAATCGTTTTCTaGCCGGGAGTCTTCCACTCATTAACTCTTTTATCT | + |
Preference number: 6 (lower is better) Translates to: CRWFTAHFTIVF*PGVFHSLTLLS Trigger: AGATAAAAGAGTTAATGAGTGGAAGACTCCCGGCAAGAAAACGATTGTGAAGTGTGCAGTGAACCAGCGACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS GCA 72 bp | ACGTTCTTCTGCTTGTTGGGTTCCATGGAGTTGAACTaGTCACAAAGGTCTCCATCAATCACATTCTTAACA | + |
Preference number: 6 (lower is better) Translates to: TFFCLLGSMELN*SQRSPSITFLT Trigger: TGTTAAGAATGTGATTGATGGAGACCTTTGTGAGCAGTTCAACTCCATGGAACCCAACAAGCAGAAGAACGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS CCA 72 bp | TCTAAAGTGATCTTAAAGATATCTCCCTGCTCCGTTTaGGCCAGAAAGAAGAACATGGACTTGGTCTTATGG | + |
Preference number: 6 (lower is better) Translates to: SKVILKISPCSV*ARKKNMDLVLW Trigger: CCATAAGACCAAGTCCATGTTCTTCTTTCTGGCCCAAACGGAGCAGGGAGATATCTTTAAGATCACTTTAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS CAA 72 bp | CTCGTTACGCTTGTATCGAACCCAGATGAAACTTTCTaGGACATCAGACACAATTACCCTGTGACCAATTGT | + |
Preference number: 6 (lower is better) Translates to: LVTLVSNPDETF*DIRHNYPVTNC Trigger: ACAATTGGTCACAGGGTAATTGTGTCTGATGTCCAAGAAAGTTTCATCTGGGTTCGATACAAGCGTAACGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS CAA 72 bp | TCATCAGCAAAGATAATGAGCTGGTTCTCGTTACGCTaGTATCGAACCCAGATGAAACTTTCTTGGACATCA | + |
Preference number: 6 (lower is better) Translates to: SSAKIMSWFSLR*YRTQMKLSWTS Trigger: TGATGTCCAAGAAAGTTTCATCTGGGTTCGATACAAGCGTAACGAGAACCAGCTCATTATCTTTGCTGATGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS CCA 72 bp | CCCTGTGACCAATTGTCTGGATCCCAGATATGTAATTaGCAATATGCTTATTCTCACACTTTCGAAGTAACT | + |
Preference number: 6 (lower is better) Translates to: PCDQLSGSQICN*QYAYSHTFEVT Trigger: AGTTACTTCGAAAGTGTGAGAATAAGCATATTGCCAATTACATATCTGGGATCCAGACAATTGGTCACAGGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS CAA 72 bp | TTTCTTGGACATCAGACACAATTACCCTGTGACCAATaGTCTGGATCCCAGATATGTAATTGGCAATATGCT | + |
Preference number: 6 (lower is better) Translates to: FLGHQTQLPCDQ*SGSQICNWQYA Trigger: AGCATATTGCCAATTACATATCTGGGATCCAGACAATTGGTCACAGGGTAATTGTGTCTGATGTCCAAGAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |
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CDS TCA 72 bp | ATGGGCAATTTGATACAAGTAATGATTTCCAAATTCTaGCGCCACAAAAAGGAAGCCTGTTTTAAGCACACA | + |
Preference number: 6 (lower is better) Translates to: MGNLIQVMISKF*RHKKEACFKHT Trigger: TGTGTGCTTAAAACAGGCTTCCTTTTTGTGGCGTCAGAATTTGGAAATCATTACTTGTATCAAATTGCCCAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042012.7 |