Pregenerated sensors for SF3B2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024853Ensembl transcript IDs: ENSMUST00000025774.11, ENSMUST00000235182.2
Found 153 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGTTCTCCAATAGGTAAGAAATCGGCCTTTCTGCCACAAGGTCAATaGGGAAGGCCTGACCTGGCCTACTTCCCTAGCCTACAGTTACTT | + |
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Preference number: 1 (lower is better) Translates to: CSPIGKKSAFLPQGQ*GRPDLAYFPSLQLL Trigger: AAGTAACTGTAGGCTAGGGAAGTAGGCCAGGTCAGGCCTTCCTCATTGACCTTGTGGCAGAAAGGCCGATTTCTTACCTATTGGAGAACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025774.11 |
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| 3UTR-3UTR TCA 90 bp | GTCAGACCAGACCCAAAGGTACCTTCAGCAGAGCCTTCACACACAGGAGGGGTACCTATGGGCCATCTGTaGTTACAGGCAAGAAGTAGA | + |
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Preference number: 2 (lower is better) Translates to: VRPDPKVPSAEPSHTGGVPMGHL*LQARSR Trigger: TCTACTTCTTGCCTGTAATCACAGATGGCCCATAGG...TACCCCTCCTGTGTGTGAAGGCTCTGCTGAAGGTACCTTTGGGTCTGGTCTGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025774.11 |
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| 3UTR-3UTR CAA 90 bp | GTACCTTCAGCAGAGCCTTCACACACAGGAGGGGTAGGGATAGTGAACTACCCATGTATTCATCCTTCCTaGGGAAACAGCTTTATTTAC | + |
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Preference number: 3 (lower is better) Translates to: VPSAEPSHTGGVGIVNYPCIHPS*GNSFIY Trigger: GTAAATAAAGCTGTTTCCCAAGGAAGGATGAATACA...TGGGTAGTTCACTATCCCTACCCCTCCTGTGTGTGAAGGCTCTGCTGAAGGTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025774.11 |
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| 3UTR TCA 72 bp | TCAGAACTACAGTCCCATAGTCCTATGGGCCATCTGTaGTTACAGGCAAGAAGTAGATGCTTTTGCAGAAGC | + |
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Preference number: 3 (lower is better) Translates to: SELQSHSPMGHL*LQARSRCFCRS Trigger: GCTTCTGCAAAAGCATCTACTTCTTGCCTGTAATCACAGATGGCCCATAGGACTATGGGACTGTAGTTCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025774.11 |
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| 3UTR CCA 72 bp | ACAAGTTCAGTTCAGAACTACAGTCCCATAGTCCTATaGGCCATCTGTGATTACAGGCAAGAAGTAGATGCT | + |
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Preference number: 3 (lower is better) Translates to: TSSVQNYSPIVL*AICDYRQEVDA Trigger: AGCATCTACTTCTTGCCTGTAATCACAGATGGCCCATAGGACTATGGGACTGTAGTTCTGAACTGAACTTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025774.11 |
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| CDS-3UTR TCA 90 bp | GTCAGACCAGACCCAAAGGTACCTTCAGCAGAGCCTTCACACACAGGAGGGGTAAGTTCCGGGTGGCCTTaGGGTGGACCAAGAGCTTGG | + |
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Preference number: 4 (lower is better) Translates to: VRPDPKVPSAEPSHTGGVSSGWP*GGPRAW Trigger: CCAAGCTCTTGGTCCACCTCAAGGCCACCCGGAACT...TACCCCTCCTGTGTGTGAAGGCTCTGCTGAAGGTACCTTTGGGTCTGGTCTGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025774.11 |
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| CDS-3UTR TCA 90 bp | GTCAGACCAGACCCAAAGGTACCTTCAGCAGAGCCTTCACACACAGGAGGGGTACGGCTGTCCTGGGGCTaGGCTTTCCGTTTCTTTTGC | + |
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Preference number: 4 (lower is better) Translates to: VRPDPKVPSAEPSHTGGVRLSWG*AFRFFC Trigger: GCAAAAGAAACGGAAAGCTCAGCCCCAGGACAGCCG...TACCCCTCCTGTGTGTGAAGGCTCTGCTGAAGGTACCTTTGGGTCTGGTCTGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000025774.11 |
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| CDS-3UTR GCA 90 bp | GTCAGACCAGACCCAAAGGTACCTTCAGCAGAGCCTTCACACACAGGAGGGGTAAGCTGCCTGCTGCTGTaGCAGCTTCAGCCGTTCTTC | + |
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Preference number: 4 (lower is better) Translates to: VRPDPKVPSAEPSHTGGVSCLLL*QLQPFF Trigger: GAAGAACGGCTGAAGCTGGCACAGCAGCAGGCAGCT...TACCCCTCCTGTGTGTGAAGGCTCTGCTGAAGGTACCTTTGGGTCTGGTCTGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025774.11 |
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| CDS-3UTR GCA 90 bp | GTACCTTCAGCAGAGCCTTCACACACAGGAGGGGTAGGGATAGTGAACTACCCAGGTGGCCCGTATCGCTaGATGGCAATCAGCCACGGA | + |
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Preference number: 4 (lower is better) Translates to: VPSAEPSHTGGVGIVNYPGGPYR*MAISHG Trigger: TCCGTGGCTGATTGCCATGCAGCGATACGGGCCACC...TGGGTAGTTCACTATCCCTACCCCTCCTGTGTGTGAAGGCTCTGCTGAAGGTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025774.11 |
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| CDS-3UTR CCA 90 bp | GTCAGACCAGACCCAAAGGTACCTTCAGCAGAGCCTTCACACACAGGAGGGGTAAAAACACCAGTGGCGTaGCACAGGGACGGAGTTCCG | + |
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Preference number: 4 (lower is better) Translates to: VRPDPKVPSAEPSHTGGVKTPVA*HRDGVP Trigger: CGGAACTCCGTCCCTGTGCCACGCCACTGGTGTTTT...TACCCCTCCTGTGTGTGAAGGCTCTGCTGAAGGTACCTTTGGGTCTGGTCTGAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025774.11 |
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| CDS-3UTR TCA 90 bp | AAGGTACCTTCAGCAGAGCCTTCACACACAGGAGGGGTAGGGATAGTGAACTACGGTCCCCATGGATGGTaGGTTTCGGCTTGGTCTGCC | + |
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Preference number: 4 (lower is better) Translates to: KVPSAEPSHTGGVGIVNYGPHGW*VSAWSA Trigger: GGCAGACCAAGCCGAAACTCACCATCCATGGGGACC...GTAGTTCACTATCCCTACCCCTCCTGTGTGTGAAGGCTCTGCTGAAGGTACCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025774.11 |
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| CDS-3UTR GCA 90 bp | AGCCACGGTGCTAAGCTGGCTATTTTTATTCCCCACGGACAAAGCAGTAAGGTCAGGCGGCCGAGGGACTaGAGTGCCCATCTTGGCGAT | + |
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Preference number: 4 (lower is better) Translates to: SHGAKLAIFIPHGQSSKVRRPRD*SAHLGD Trigger: ATCGCCAAGATGGGCACTGCAGTCCCTCGGCCGCCT...GACCTTACTGCTTTGTCCGTGGGGAATAAAAATAGCCAGCTTAGCACCGTGGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025774.11 |
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| CDS-3UTR GCA 90 bp | CCAAAGGTACCTTCAGCAGAGCCTTCACACACAGGAGGGGTAGGGATAGTGAACGCTACTTCCACACCTTaGAATTCAGGGGCTGGGCCC | + |
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Preference number: 4 (lower is better) Translates to: PKVPSAEPSHTGGVGIVNATSTP*NSGAGP Trigger: GGGCCCAGCCCCTGAATTGCAAGGTGTGGAAGTAGC...GTTCACTATCCCTACCCCTCCTGTGTGTGAAGGCTCTGCTGAAGGTACCTTTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025774.11 |
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| CDS-3UTR GCA 90 bp | GTACCTTCAGCAGAGCCTTCACACACAGGAGGGGTAGGGATAGTGAACTACCCATGCTGCTCCCGAACGTaGTCCTCGTACTTCTGCGTC | + |
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Preference number: 4 (lower is better) Translates to: VPSAEPSHTGGVGIVNYPCCSRT*SSYFCV Trigger: GACGCAGAAGTACGAGGAGCACGTTCGGGAGCAGCA...TGGGTAGTTCACTATCCCTACCCCTCCTGTGTGTGAAGGCTCTGCTGAAGGTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025774.11 |
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| CDS-3UTR CCA 90 bp | GTCAGACCAGACCCAAAGGTACCTTCAGCAGAGCCTTCACACACAGGAGGGGTAAGGGATTTTCAGGTTTaGGTAGGATGGGGGTGGCCC | + |
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Preference number: 4 (lower is better) Translates to: VRPDPKVPSAEPSHTGGVRDFQV*VGWGWP Trigger: GGGCCACCCCCATCCTACCCAAACCTGAAAATCCCT...TACCCCTCCTGTGTGTGAAGGCTCTGCTGAAGGTACCTTTGGGTCTGGTCTGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000025774.11 |
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| CDS-3UTR CCA 90 bp | AGCCACGGTGCTAAGCTGGCTATTTTTATTCCCCACGGACAAAGCAGTAAGGTCCCCAGTCTCATCCACTaGGGGTTTGCCCCAGCCACC | + |
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Preference number: 4 (lower is better) Translates to: SHGAKLAIFIPHGQSSKVPSLIH*GFAPAT Trigger: GGTGGCTGGGGCAAACCCCCAGTGGATGAGACTGGG...GACCTTACTGCTTTGTCCGTGGGGAATAAAAATAGCCAGCTTAGCACCGTGGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 1 transcripts: ENSMUST00000025774.11 |
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| CDS-3UTR CCA 90 bp | CAGCCTAGCCACGGTGCTAAGCTGGCTATTTTTATTCCCCACGGACAAAGCAGTCTGCAGTGCCCATCTTaGCGATCTCCTGCTGCCGTT | + |
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Preference number: 4 (lower is better) Translates to: QPSHGAKLAIFIPHGQSSLQCPS*RSPAAV Trigger: AACGGCAGCAGGAGATCGCCAAGATGGGCACTGCAG...ACTGCTTTGTCCGTGGGGAATAAAAATAGCCAGCTTAGCACCGTGGCTAGGCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025774.11 |
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| CDS-3UTR CCA 90 bp | CCAAAGGTACCTTCAGCAGAGCCTTCACACACAGGAGGGGTAGGGATAGTGAACGGAGGAGGGACTTTGTaGGCATTAGGTCCTACTGGC | + |
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Preference number: 4 (lower is better) Translates to: PKVPSAEPSHTGGVGIVNGGGTL*ALGPTG Trigger: GCCAGTAGGACCTAATGCCCACAAAGTCCCTCCTCC...GTTCACTATCCCTACCCCTCCTGTGTGTGAAGGCTCTGCTGAAGGTACCTTTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025774.11 |
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| CDS-3UTR CCA 90 bp | AAGGTACCTTCAGCAGAGCCTTCACACACAGGAGGGGTAGGGATAGTGAACTACCCCCAGCCACCAGCATaGTATCCAAAGGAGCAGCTC | + |
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Preference number: 4 (lower is better) Translates to: KVPSAEPSHTGGVGIVNYPQPPA*YPKEQL Trigger: GAGCTGCTCCTTTGGATACCATGCTGGTGGCTGGGG...GTAGTTCACTATCCCTACCCCTCCTGTGTGTGAAGGCTCTGCTGAAGGTACCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025774.11 |
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| CDS-3UTR CCA 90 bp | CCAAAGGTACCTTCAGCAGAGCCTTCACACACAGGAGGGGTAGGGATAGTGAACTGGCTCCCCCAACAGTaGCTGTTCTCTTCTCTGGCA | + |
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Preference number: 4 (lower is better) Translates to: PKVPSAEPSHTGGVGIVNWLPQQ*LFSSLA Trigger: TGCCAGAGAAGAGAACAGCCACTGTTGGGGGAGCCA...GTTCACTATCCCTACCCCTCCTGTGTGTGAAGGCTCTGCTGAAGGTACCTTTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025774.11 |
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| CDS-3UTR TCA 90 bp | AGAGAGAGAGGTTCAAGAGCGCCTGTATTCATCCTTCCTTGGGAAACAGCTTTATCTGCCAATCTGGCCTaGAGCTCCTGCGCAGCCCAG | + |
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Preference number: 4 (lower is better) Translates to: RERGSRAPVFILPWETALSANLA*SSCAAQ Trigger: CTGGGCTGCGCAGGAGCTTCAGGCCAGATTGGCAGA...TAAAGCTGTTTCCCAAGGAAGGATGAATACAGGCGCTCTTGAACCTCTCTCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025774.11 |
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| CDS-3UTR TCA 90 bp | GTACCTTCAGCAGAGCCTTCACACACAGGAGGGGTAGGGATAGTGAACTACCCATCTTCCTCAGCTCAATaGGTTCAGGGGTCTCCATCC | + |
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Preference number: 4 (lower is better) Translates to: VPSAEPSHTGGVGIVNYPSSSAQ*VQGSPS Trigger: GGATGGAGACCCCTGAACTCATTGAGCTGAGGAAGA...TGGGTAGTTCACTATCCCTACCCCTCCTGTGTGTGAAGGCTCTGCTGAAGGTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025774.11 |
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| CDS-3UTR GCA 90 bp | GCTAAGCTGGCTATTTTTATTCCCCACGGACAAAGCAGTAAGGTCAGACCAGACGCCGAGGGACTGCAGTaGCCATCTTGGCGATCTCCT | + |
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Preference number: 4 (lower is better) Translates to: AKLAIFIPHGQSSKVRPDAEGLQ*PSWRSP Trigger: AGGAGATCGCCAAGATGGGCACTGCAGTCCCTCGGC...GTCTGGTCTGACCTTACTGCTTTGTCCGTGGGGAATAAAAATAGCCAGCTTAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025774.11 |
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| CDS-3UTR GCA 90 bp | AGCCACGGTGCTAAGCTGGCTATTTTTATTCCCCACGGACAAAGCAGTAAGGTCGAGCTTGGGGTCCTGTaGCGTCACGTCATGCATCTC | + |
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Preference number: 4 (lower is better) Translates to: SHGAKLAIFIPHGQSSKVELGVL*RHVMHL Trigger: GAGATGCATGACGTGACGGCACAGGACCCCAAGCTC...GACCTTACTGCTTTGTCCGTGGGGAATAAAAATAGCCAGCTTAGCACCGTGGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000025774.11 |
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| CDS-3UTR GCA 90 bp | AAGGTACCTTCAGCAGAGCCTTCACACACAGGAGGGGTAGGGATAGTGAACTACTTCTCTACTTGTGCCTaGTGCTCCCGAACGTGCTCC | + |
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Preference number: 4 (lower is better) Translates to: KVPSAEPSHTGGVGIVNYFSTCA*CSRTCS Trigger: GGAGCACGTTCGGGAGCAGCAGGCACAAGTAGAGAA...GTAGTTCACTATCCCTACCCCTCCTGTGTGTGAAGGCTCTGCTGAAGGTACCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025774.11 |
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| CDS-3UTR GCA 90 bp | GGGAGTCCAGATCTAGCTTTAGGGAGCCACAGAGAAAGCCCAGACATACAAAGACCTTGTATTTCTTGCTaGCCCCACGGCTGTCCTGGG | + |
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Preference number: 4 (lower is better) Translates to: GSPDLALGSHRESPDIQRPCISC*PHGCPG Trigger: CCCAGGACAGCCGTGGGGGCAGCAAGAAATACAAGG...TCTTTGTATGTCTGGGCTTTCTCTGTGGCTCCCTAAAGCTAGATCTGGACTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025774.11 |
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| CDS-3UTR CCA 90 bp | CAGCCTAGCCACGGTGCTAAGCTGGCTATTTTTATTCCCCACGGACAAAGCAGTAAGCCTGGGGGATCTTaGGGCCCACAGAAGGATCAT | + |
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Preference number: 4 (lower is better) Translates to: QPSHGAKLAIFIPHGQSSKPGGS*GPQKDH Trigger: ATGATCCTTCTGTGGGCCCCAAGATCCCCCAGGCTT...ACTGCTTTGTCCGTGGGGAATAAAAATAGCCAGCTTAGCACCGTGGCTAGGCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000025774.11 |
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| CDS-3UTR CCA 90 bp | AGTTCAGTTCAGAACTACAGTCCCATAGTCCTATGGGCCATCTGTGATTACAGGCGGGTGGCCTTGAGGTaGACCAAGAGCTTGGGGTCC | + |
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Preference number: 4 (lower is better) Translates to: SSVQNYSPIVLWAICDYRRVALR*TKSLGS Trigger: GGACCCCAAGCTCTTGGTCCACCTCAAGGCCACCCG...CCTGTAATCACAGATGGCCCATAGGACTATGGGACTGTAGTTCTGAACTGAACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025774.11 |
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| CDS-3UTR CCA 90 bp | AAGGTACCTTCAGCAGAGCCTTCACACACAGGAGGGGTAGGGATAGTGAACTACCGTACTTCTGCGTCATaGCCATGGGGTCCAACTCCA | + |
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Preference number: 4 (lower is better) Translates to: KVPSAEPSHTGGVGIVNYRTSAS*PWGPTP Trigger: TGGAGTTGGACCCCATGGCCATGACGCAGAAGTACG...GTAGTTCACTATCCCTACCCCTCCTGTGTGTGAAGGCTCTGCTGAAGGTACCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025774.11 |
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| CDS-3UTR GCA 90 bp | GCTAAGCTGGCTATTTTTATTCCCCACGGACAAAGCAGTAAGGTCAGACCAGACCGGCGCTCCTATCTCTaGCAATCTGGCCTGAAGCTC | + |
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Preference number: 4 (lower is better) Translates to: AKLAIFIPHGQSSKVRPDRRSYL*QSGLKL Trigger: GAGCTTCAGGCCAGATTGGCAGAGATAGGAGCGCCG...GTCTGGTCTGACCTTACTGCTTTGTCCGTGGGGAATAAAAATAGCCAGCTTAGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025774.11 |
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| CDS-3UTR GCA 90 bp | CAGAACTACAGTCCCATAGTCCTATGGGCCATCTGTGATTACAGGCAAGAAGTACATCCACTGGGGGTTTaGCCCAGCCACCAGCATGGT | + |
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Preference number: 4 (lower is better) Translates to: QNYSPIVLWAICDYRQEVHPLGV*PSHQHG Trigger: ACCATGCTGGTGGCTGGGGCAAACCCCCAGTGGATG...TACTTCTTGCCTGTAATCACAGATGGCCCATAGGACTATGGGACTGTAGTTCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025774.11 |
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| CDS-3UTR GCA 90 bp | AGCCACGGTGCTAAGCTGGCTATTTTTATTCCCCACGGACAAAGCAGTAAGGTCGATGAGGCCGCTGTCTaGAGGTGTGATGAAGCCAGT | + |
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Preference number: 4 (lower is better) Translates to: SHGAKLAIFIPHGQSSKVDEAAV*RCDEAS Trigger: ACTGGCTTCATCACACCTGCAGACAGCGGCCTCATC...GACCTTACTGCTTTGTCCGTGGGGAATAAAAATAGCCAGCTTAGCACCGTGGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025774.11 |
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| CDS-3UTR GCA 90 bp | CAGCCTAGCCACGGTGCTAAGCTGGCTATTTTTATTCCCCACGGACAAAGCAGTTTCTGCTTAGCAGCATaGTCAGCCACCATGTCGCTG | + |
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Preference number: 4 (lower is better) Translates to: QPSHGAKLAIFIPHGQSSFCLAA*SATMSL Trigger: CAGCGACATGGTGGCTGAGCATGCTGCTAAGCAGAA...ACTGCTTTGTCCGTGGGGAATAAAAATAGCCAGCTTAGCACCGTGGCTAGGCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025774.11 |
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| CDS-3UTR CCA 90 bp | AAGGTACCTTCAGCAGAGCCTTCACACACAGGAGGGGTAGGGATAGTGAACTACTCTGCGTCATGGCCATaGGGTCCAACTCCAATTCCT | + |
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Preference number: 4 (lower is better) Translates to: KVPSAEPSHTGGVGIVNYSASWP*GPTPIP Trigger: AGGAATTGGAGTTGGACCCCATGGCCATGACGCAGA...GTAGTTCACTATCCCTACCCCTCCTGTGTGTGAAGGCTCTGCTGAAGGTACCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025774.11 |
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| CDS-3UTR TCA 90 bp | GTACCTTCAGCAGAGCCTTCACACACAGGAGGGGTAGGGATAGTGAACTACCCAATGCCCCGTTTGCCTTaGAGGTACTTGCGCTTAAAA | + |
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Preference number: 4 (lower is better) Translates to: VPSAEPSHTGGVGIVNYPMPRLP*RYLRLK Trigger: TTTTAAGCGCAAGTACCTTCAAGGCAAACGGGGCAT...TGGGTAGTTCACTATCCCTACCCCTCCTGTGTGTGAAGGCTCTGCTGAAGGTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025774.11 |
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| CDS-3UTR TCA 90 bp | AAGGTACCTTCAGCAGAGCCTTCACACACAGGAGGGGTAGGGATAGTGAACTACCAGCCACCATGTCGCTaGAGTCTTCCTTCTCTACTT | + |
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Preference number: 4 (lower is better) Translates to: KVPSAEPSHTGGVGIVNYQPPCR*SLPSLL Trigger: AAGTAGAGAAGGAAGACTTCAGCGACATGGTGGCTG...GTAGTTCACTATCCCTACCCCTCCTGTGTGTGAAGGCTCTGCTGAAGGTACCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025774.11 |
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| CDS-3UTR GCA 90 bp | AGTTCAGTTCAGAACTACAGTCCCATAGTCCTATGGGCCATCTGTGATTACAGGAGCAAAGCTGCCTGCTaGTGTGCCAGCTTCAGCCGT | + |
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Preference number: 4 (lower is better) Translates to: SSVQNYSPIVLWAICDYRSKAAC*CASFSR Trigger: ACGGCTGAAGCTGGCACAGCAGCAGGCAGCTTTGCT...CCTGTAATCACAGATGGCCCATAGGACTATGGGACTGTAGTTCTGAACTGAACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025774.11 |
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| CDS-3UTR GCA 90 bp | AGTTCAGTTCAGAACTACAGTCCCATAGTCCTATGGGCCATCTGTGATTACAGGGCACGCTCCTCTTGCTaGATCAGCAAAGCTGCCTGC | + |
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Preference number: 4 (lower is better) Translates to: SSVQNYSPIVLWAICDYRARSSC*ISKAAC Trigger: GCAGGCAGCTTTGCTGATGCAGCAAGAGGAGCGTGC...CCTGTAATCACAGATGGCCCATAGGACTATGGGACTGTAGTTCTGAACTGAACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025774.11 |
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| CDS-3UTR GCA 90 bp | AGCCACGGTGCTAAGCTGGCTATTTTTATTCCCCACGGACAAAGCAGTAAGGTCTTGGCGATCTCCTGCTaGCGTTCCTGCTCCATTAAC | + |
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Preference number: 4 (lower is better) Translates to: SHGAKLAIFIPHGQSSKVLAISC*RSCSIN Trigger: GTTAATGGAGCAGGAACGGCAGCAGGAGATCGCCAA...GACCTTACTGCTTTGTCCGTGGGGAATAAAAATAGCCAGCTTAGCACCGTGGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025774.11 |
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| CDS-3UTR GCA 90 bp | AAGGTACCTTCAGCAGAGCCTTCACACACAGGAGGGGTAGGGATAGTGAACTACCCTGCTCATCATCACTaGTGTCATCGTCACTGTCCT | + |
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Preference number: 4 (lower is better) Translates to: KVPSAEPSHTGGVGIVNYPAHHH*CHRHCP Trigger: AGGACAGTGACGATGACAGCAGTGATGATGAGCAGG...GTAGTTCACTATCCCTACCCCTCCTGTGTGTGAAGGCTCTGCTGAAGGTACCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025774.11 |
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| CDS-3UTR GCA 90 bp | CAGAACTACAGTCCCATAGTCCTATGGGCCATCTGTGATTACAGGCAAGAAGTATGCTCCTCGTACTTCTaGGTCATGGCCATGGGGTCC | + |
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Preference number: 4 (lower is better) Translates to: QNYSPIVLWAICDYRQEVCSSYF*VMAMGS Trigger: GGACCCCATGGCCATGACGCAGAAGTACGAGGAGCA...TACTTCTTGCCTGTAATCACAGATGGCCCATAGGACTATGGGACTGTAGTTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025774.11 |
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| CDS-3UTR GCA 90 bp | AGCCACGGTGCTAAGCTGGCTATTTTTATTCCCCACGGACAAAGCAGTAAGGTCACTCCTTGTATTTCTTaGTGCCCCCACGGCTGTCCT | + |
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Preference number: 4 (lower is better) Translates to: SHGAKLAIFIPHGQSSKVTPCIS*CPHGCP Trigger: AGGACAGCCGTGGGGGCAGCAAGAAATACAAGGAGT...GACCTTACTGCTTTGTCCGTGGGGAATAAAAATAGCCAGCTTAGCACCGTGGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000025774.11 |
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| CDS-3UTR CCA 90 bp | AGAGAGAGGTTCAAGAGCGCCTGTATTCATCCTTCCTTGGGAAACAGCTTTATTGGTGGACCAAGAGCTTaGGGTCCTGTGCCGTCACGT | + |
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Preference number: 4 (lower is better) Translates to: RERFKSACIHPSLGNSFIGGPRA*GPVPSR Trigger: ACGTGACGGCACAGGACCCCAAGCTCTTGGTCCACC...AATAAAGCTGTTTCCCAAGGAAGGATGAATACAGGCGCTCTTGAACCTCTCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025774.11 |
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| CDS-3UTR CCA 90 bp | AGAGAGAGAGGTTCAAGAGCGCCTGTATTCATCCTTCCTTGGGAAACAGCTTTACGCTTAAAACACCAGTaGCGTGGCACAGGGACGGAG | + |
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Preference number: 4 (lower is better) Translates to: RERGSRAPVFILPWETALRLKHQ*RGTGTE Trigger: CTCCGTCCCTGTGCCACGCCACTGGTGTTTTAAGCG...TAAAGCTGTTTCCCAAGGAAGGATGAATACAGGCGCTCTTGAACCTCTCTCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025774.11 |
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| CDS-3UTR CCA 90 bp | AGAGAGAGGTTCAAGAGCGCCTGTATTCATCCTTCCTTGGGAAACAGCTTTATTGCCCGTATCGCTGCATaGCAATCAGCCACGGAGGAG | + |
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Preference number: 4 (lower is better) Translates to: RERFKSACIHPSLGNSFIARIAA*QSATEE Trigger: CTCCTCCGTGGCTGATTGCCATGCAGCGATACGGGC...AATAAAGCTGTTTCCCAAGGAAGGATGAATACAGGCGCTCTTGAACCTCTCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025774.11 |
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| CDS-3UTR TCA 90 bp | GGTTCAAGAGCGCCTGTATTCATCCTTCCTTGGGAAACAGCTTTATTTACAAAACCCAGACAGCTGTGCTaGCATAGGAGGAGGAGCCGC | + |
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Preference number: 4 (lower is better) Translates to: GSRAPVFILPWETALFTKPRQLC*HRRRSR Trigger: GCGGCTCCTCCTCCTATGTCAGCACAGCTGTCTGGG...TTTTGTAAATAAAGCTGTTTCCCAAGGAAGGATGAATACAGGCGCTCTTGAACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025774.11 |
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| CDS-3UTR GCA 90 bp | AGTTCAGTTCAGAACTACAGTCCCATAGTCCTATGGGCCATCTGTGATTACAGGTCCTGCTGCCGTTCCTaGTCCATTAACACAGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: SSVQNYSPIVLWAICDYRSCCRS*SINTAA Trigger: GGCAGCTGTGTTAATGGAGCAGGAACGGCAGCAGGA...CCTGTAATCACAGATGGCCCATAGGACTATGGGACTGTAGTTCTGAACTGAACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025774.11 |
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| CDS-3UTR GCA 90 bp | GGGAGTCCAGATCTAGCTTTAGGGAGCCACAGAGAAAGCCCAGACATACAAAGACTTCTTCTTGGGGACTaGAGAGCTCTCCATCTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: GSPDLALGSHRESPDIQRLLLGD*RALHLV Trigger: GACAAGATGGAGAGCTCTGCAGTCCCCAAGAAGAAG...TCTTTGTATGTCTGGGCTTTCTCTGTGGCTCCCTAAAGCTAGATCTGGACTCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025774.11 |
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| CDS-3UTR GCA 90 bp | AGCCACGGTGCTAAGCTGGCTATTTTTATTCCCCACGGACAAAGCAGTAAGGTCAGTTTCGGCTTGGTCTaGCACTTGAAGAAGGCATCG | + |
|
Preference number: 4 (lower is better) Translates to: SHGAKLAIFIPHGQSSKVSFGLV*HLKKAS Trigger: CGATGCCTTCTTCAAGTGGCAGACCAAGCCGAAACT...GACCTTACTGCTTTGTCCGTGGGGAATAAAAATAGCCAGCTTAGCACCGTGGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025774.11 |
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| CDS-3UTR CCA 90 bp | CAAGAAGTAGATGCTTTTGCAGAAGCTAAAAGAGAGAGAGGTTCAAGAGCGCCTATAGTGGCCTGGAGGTaGAGGCGGTGGCAACTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: QEVDAFAEAKRERGSRAPIVAWR*RRWQLQ Trigger: TTGCAGTTGCCACCGCCTCCACCTCCAGGCCACTAT...AGGCGCTCTTGAACCTCTCTCTCTTTTAGCTTCTGCAAAAGCATCTACTTCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025774.11 |
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| CDS-3UTR TCA 90 bp | CAAGAAGTAGATGCTTTTGCAGAAGCTAAAAGAGAGAGAGGTTCAAGAGCGCCTTCCTCCTCCTCCTGCTaGGAGTTCATCTCTTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: QEVDAFAEAKRERGSRAPSSSSC*EFISSC Trigger: GCAGGAAGAGATGAACTCTCAGCAGGAGGAGGAGGA...AGGCGCTCTTGAACCTCTCTCTCTTTTAGCTTCTGCAAAAGCATCTACTTCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025774.11 |
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| CDS-3UTR TCA 90 bp | GCTAAGCTGGCTATTTTTATTCCCCACGGACAAAGCAGTAAGGTCAGACCAGACGCCTCTCTCATTTCCTaGATGCCTGTGCGTTTGATG | + |
|
Preference number: 4 (lower is better) Translates to: AKLAIFIPHGQSSKVRPDASLIS*MPVRLM Trigger: CATCAAACGCACAGGCATTCAGGAAATGAGAGAGGC...GTCTGGTCTGACCTTACTGCTTTGTCCGTGGGGAATAAAAATAGCCAGCTTAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025774.11 |
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| CDS-3UTR TCA 90 bp | GCTAAGCTGGCTATTTTTATTCCCCACGGACAAAGCAGTAAGGTCAGACCAGACCTCCTCCTCCTCTTCTaGGGATTCTTCATCAGATGG | + |
|
Preference number: 4 (lower is better) Translates to: AKLAIFIPHGQSSKVRPDLLLLF*GFFIRW Trigger: CCATCTGATGAAGAATCCTCAGAAGAGGAGGAGGAG...GTCTGGTCTGACCTTACTGCTTTGTCCGTGGGGAATAAAAATAGCCAGCTTAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025774.11 |
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| CDS-3UTR TCA 90 bp | AAGGTACCTTCAGCAGAGCCTTCACACACAGGAGGGGTAGGGATAGTGAACTACTCTCTGGCAATACAGTaGATAACTGAGGTGTCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: KVPSAEPSHTGGVGIVNYSLAIQ*ITEVSH Trigger: GTGAGACACCTCAGTTATTCACTGTATTGCCAGAGA...GTAGTTCACTATCCCTACCCCTCCTGTGTGTGAAGGCTCTGCTGAAGGTACCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025774.11 |
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| CDS-3UTR GCA 90 bp | AGAGAGAGGTTCAAGAGCGCCTGTATTCATCCTTCCTTGGGAAACAGCTTTATTTTGGCACGCTCCTCTTaGTGCATCAGCAAAGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: RERFKSACIHPSLGNSFILARSS*CISKAA Trigger: GGCAGCTTTGCTGATGCAGCAAGAGGAGCGTGCCAA...AATAAAGCTGTTTCCCAAGGAAGGATGAATACAGGCGCTCTTGAACCTCTCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025774.11 |
||
| CDS-3UTR GCA 90 bp | CAGAACTACAGTCCCATAGTCCTATGGGCCATCTGTGATTACAGGCAAGAAGTAATCTTGGCGATCTCCTaGTGCCGTTCCTGCTCCATT | + |
|
Preference number: 4 (lower is better) Translates to: QNYSPIVLWAICDYRQEVILAIS*CRSCSI Trigger: AATGGAGCAGGAACGGCAGCAGGAGATCGCCAAGAT...TACTTCTTGCCTGTAATCACAGATGGCCCATAGGACTATGGGACTGTAGTTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025774.11 |
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| CDS-3UTR GCA 90 bp | CAGAACTACAGTCCCATAGTCCTATGGGCCATCTGTGATTACAGGCAAGAAGTATTCCTTCTCTACTTGTaGCTGCTGCTCCCGAACGTG | + |
|
Preference number: 4 (lower is better) Translates to: QNYSPIVLWAICDYRQEVFLLYL*LLLPNV Trigger: CACGTTCGGGAGCAGCAGGCACAAGTAGAGAAGGAA...TACTTCTTGCCTGTAATCACAGATGGCCCATAGGACTATGGGACTGTAGTTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025774.11 |
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| CDS-3UTR CCA 90 bp | AGAGAGAGGTTCAAGAGCGCCTGTATTCATCCTTCCTTGGGAAACAGCTTTATTCTATCTCTGCCAATCTaGCCTGAAGCTCCTGCGCAG | + |
|
Preference number: 4 (lower is better) Translates to: RERFKSACIHPSLGNSFILSLPI*PEAPAQ Trigger: CTGCGCAGGAGCTTCAGGCCAGATTGGCAGAGATAG...AATAAAGCTGTTTCCCAAGGAAGGATGAATACAGGCGCTCTTGAACCTCTCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025774.11 |
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| CDS-3UTR CCA 90 bp | AGTTCAGTTCAGAACTACAGTCCCATAGTCCTATGGGCCATCTGTGATTACAGGTCCCATAGGTGGTGGTaGCATAGGAATCCCAGACAG | + |
|
Preference number: 4 (lower is better) Translates to: SSVQNYSPIVLWAICDYRSHRWW*HRNPRQ Trigger: CTGTCTGGGATTCCTATGCCACCACCACCTATGGGA...CCTGTAATCACAGATGGCCCATAGGACTATGGGACTGTAGTTCTGAACTGAACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025774.11 |
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| CDS-3UTR CCA 90 bp | GCTAAGCTGGCTATTTTTATTCCCCACGGACAAAGCAGTAAGGTCAGACCAGACTGTCATAAATGTGGGTaGATCCCATCATGGCTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: AKLAIFIPHGQSSKVRPDCHKCG*IPSWLP Trigger: GGGGAGCCATGATGGGATCCACCCACATTTATGACA...GTCTGGTCTGACCTTACTGCTTTGTCCGTGGGGAATAAAAATAGCCAGCTTAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025774.11 |
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| CDS-3UTR CCA 90 bp | AGAGAGAGGTTCAAGAGCGCCTGTATTCATCCTTCCTTGGGAAACAGCTTTATTTTGCAATTCAGGGGCTaGGCCCTTCCGGCTCATAAC | + |
|
Preference number: 4 (lower is better) Translates to: RERFKSACIHPSLGNSFILQFRG*ALPAHN Trigger: GTTATGAGCCGGAAGGGCCCAGCCCCTGAATTGCAA...AATAAAGCTGTTTCCCAAGGAAGGATGAATACAGGCGCTCTTGAACCTCTCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025774.11 |
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| CDS-3UTR TCA 90 bp | AGAGAGAGGTTCAAGAGCGCCTGTATTCATCCTTCCTTGGGAAACAGCTTTATTGCTTGGTCTGCCACTTaGAGAAGGCATCGTGTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: RERFKSACIHPSLGNSFIAWSAT*RRHRVA Trigger: AGCTACACGATGCCTTCTTCAAGTGGCAGACCAAGC...AATAAAGCTGTTTCCCAAGGAAGGATGAATACAGGCGCTCTTGAACCTCTCTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025774.11 |
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| CDS-3UTR GCA 90 bp | CAAGAAGTAGATGCTTTTGCAGAAGCTAAAAGAGAGAGAGGTTCAAGAGCGCCTTCGTCACTGTCCTTGTaGTCCTCCTCAAAGCCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: QEVDAFAEAKRERGSRAPSSLSL*SSSKPF Trigger: GAAGGGCTTTGAGGAGGAGCACAAGGACAGTGACGA...AGGCGCTCTTGAACCTCTCTCTCTTTTAGCTTCTGCAAAAGCATCTACTTCTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025774.11 |
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| CDS-3UTR GCA 90 bp | AGAGAGAGAGGTTCAAGAGCGCCTGTATTCATCCTTCCTTGGGAAACAGCTTTATCTCAATGCCCCGTTTaGCTTGAAGGTACTTGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: RERGSRAPVFILPWETALSQCPV*LEGTCA Trigger: AGCGCAAGTACCTTCAAGGCAAACGGGGCATTGAGA...TAAAGCTGTTTCCCAAGGAAGGATGAATACAGGCGCTCTTGAACCTCTCTCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025774.11 |
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| CDS-3UTR GCA 90 bp | CAGAACTACAGTCCCATAGTCCTATGGGCCATCTGTGATTACAGGCAAGAAGTATGTTCTTCCTTCTCCTaGAGGGCCTCTCTCATTTCC | + |
|
Preference number: 4 (lower is better) Translates to: QNYSPIVLWAICDYRQEVCSSFS*RASLIS Trigger: GGAAATGAGAGAGGCCCTGCAGGAGAAGGAAGAACA...TACTTCTTGCCTGTAATCACAGATGGCCCATAGGACTATGGGACTGTAGTTCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025774.11 |
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| CDS-3UTR CCA 90 bp | GGTTCAAGAGCGCCTGTATTCATCCTTCCTTGGGAAACAGCTTTATTTACAAAAACACAGCTGCCTGCTTaGCACGCTCCTCTTGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: GSRAPVFILPWETALFTKTQLPA*HAPLAA Trigger: TGCAGCAAGAGGAGCGTGCCAAGCAGGCAGCTGTGT...TTTTGTAAATAAAGCTGTTTCCCAAGGAAGGATGAATACAGGCGCTCTTGAACC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025774.11 |
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| CDS-3UTR GCA 90 bp | TCCAGATCTAGCTTTAGGGAGCCACAGAGAAAGCCCAGACATACAAAGAGCCTAGCTTTCCGTTTCTTTTaGTTCTGCTTAGCAGCATGC | + |
|
Preference number: 4 (lower is better) Translates to: SRSSFREPQRKPRHTKSLAFRFF*FCLAAC Trigger: GCATGCTGCTAAGCAGAAGCAAAAGAAACGGAAAGC...TAGGCTCTTTGTATGTCTGGGCTTTCTCTGTGGCTCCCTAAAGCTAGATCTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025774.11 |
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| CDS-3UTR CCA 90 bp | AGAGAGAGGTTCAAGAGCGCCTGTATTCATCCTTCCTTGGGAAACAGCTTTATTAAGTCCCATAGGTGGTaGTGGCATAGGAATCCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: RERFKSACIHPSLGNSFIKSHRW*WHRNPR Trigger: TCTGGGATTCCTATGCCACCACCACCTATGGGACTT...AATAAAGCTGTTTCCCAAGGAAGGATGAATACAGGCGCTCTTGAACCTCTCTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025774.11 |
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| CDS-3UTR CCA 90 bp | GGGAGTCCAGATCTAGCTTTAGGGAGCCACAGAGAAAGCCCAGACATACAAAGACTTCTTCTTCCGTTTTaGTCTGAAACTCAGCAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: GSPDLALGSHRESPDIQRLLLPF*SETQQH Trigger: ATGCTGCTGAGTTTCAGACCAAAACGGAAGAAGAAG...TCTTTGTATGTCTGGGCTTTCTCTGTGGCTCCCTAAAGCTAGATCTGGACTCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025774.11 |
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| CDS-3UTR CCA 90 bp | CAGAACTACAGTCCCATAGTCCTATGGGCCATCTGTGATTACAGGCAAGAAGTATTCTCCTCTCAAAACTaGTCGATTCAGGACAATGCC | + |
|
Preference number: 4 (lower is better) Translates to: QNYSPIVLWAICDYRQEVFSSQN*SIQDNA Trigger: GGCATTGTCCTGAATCGACCAGTTTTGAGAGGAGAA...TACTTCTTGCCTGTAATCACAGATGGCCCATAGGACTATGGGACTGTAGTTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025774.11 |
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| CDS-3UTR CCA 90 bp | GGTTCAAGAGCGCCTGTATTCATCCTTCCTTGGGAAACAGCTTTATTTACAAAATGCCCGCACCCGCTGTaGCTTTTTCTTCTTCTTTCG | + |
|
Preference number: 4 (lower is better) Translates to: GSRAPVFILPWETALFTKCPHPL*LFLLLS Trigger: CGAAAGAAGAAGAAAAAGCCACAGCGGGTGCGGGCA...TTTTGTAAATAAAGCTGTTTCCCAAGGAAGGATGAATACAGGCGCTCTTGAACC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025774.11 |
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| CDS-3UTR CCA 90 bp | AGAGAGAGGTTCAAGAGCGCCTGTATTCATCCTTCCTTGGGAAACAGCTTTATTGAAACTCAGCAGCATTaGTTCCAAACACGTCCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: RERFKSACIHPSLGNSFIETQQH*FQTRPH Trigger: ATGGGGACGTGTTTGGAACCAATGCTGCTGAGTTTC...AATAAAGCTGTTTCCCAAGGAAGGATGAATACAGGCGCTCTTGAACCTCTCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025774.11 |
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| CDS TCA 90 bp | GCGCGAGGCCCCAGAGGAGTACGGACACCCAGCTGCCCCATATCCTaGGGCGGCCGAGGGACTGCAGTGCCCATCTTGGCGATCTCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: ARGPRGVRTPSCPIS*GGRGTAVPILAISC Trigger: GCAGGAGATCGCCAAGATGGGCACTGCAGTCCCTCGGCCGCCTCAGGATATGGGGCAGCTGGGTGTCCGTACTCCTCTGGGGCCTCGCGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000235182.2 |
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| CDS TCA 90 bp | ACGCGAGGCCCCAGAGGAGTACGGACACCCAGCTGCCCCATATCCTaGGGCGGCCGAGGGACTGCAGTGCCCATCTTGGCGATCTCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: TRGPRGVRTPSCPIS*GGRGTAVPILAISC Trigger: GCAGGAGATCGCCAAGATGGGCACTGCAGTCCCTCGGCCGCCTCAGGATATGGGGCAGCTGGGTGTCCGTACTCCTCTGGGGCCTCGCGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025774.11 |
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| CDS CCA 90 bp | CACCAGTGGCGTGGCACAGGGACGGAGTTCCGGGTGGCCTTGAGGTaGACCAAGAGCTTGGGGTCCTGTGCCGTCACGTCATGCATCTCC | + |
|
Preference number: 5 (lower is better) Translates to: HQWRGTGTEFRVALR*TKSLGSCAVTSCIS Trigger: GGAGATGCATGACGTGACGGCACAGGACCCCAAGCTCTTGGTCCACCTCAAGGCCACCCGGAACTCCGTCCCTGTGCCACGCCACTGGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025774.11 |
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| CDS GCA 90 bp | AGTACGGACACCCAGCTGCCCCATATCCTGAGGCGGCCGAGGGACTaGAGTGCCCATCTTGGCGATCTCCTGCTGCCGTTCCTGCTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: STDTQLPHILRRPRD*SAHLGDLLLPFLLH Trigger: ATGGAGCAGGAACGGCAGCAGGAGATCGCCAAGATGGGCACTGCAGTCCCTCGGCCGCCTCAGGATATGGGGCAGCTGGGTGTCCGTACT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025774.11 ENSMUST00000235182.2 |
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| CDS GCA 90 bp | GGAGTTCCGGGTGGCCTTGAGGTGGACCAAGAGCTTGGGGTCCTGTaGCGTCACGTCATGCATCTCCACAACATCAGGCCGGGCCACCAG | + |
|
Preference number: 5 (lower is better) Translates to: GVPGGLEVDQELGVL*RHVMHLHNIRPGHQ Trigger: CTGGTGGCCCGGCCTGATGTTGTGGAGATGCATGACGTGACGGCACAGGACCCCAAGCTCTTGGTCCACCTCAAGGCCACCCGGAACTCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025774.11 |
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| CDS GCA 90 bp | GGACACCCAGCTGCCCCATATCCTGAGGCGGCCGAGGGACTGCAGTaGCCATCTTGGCGATCTCCTGCTGCCGTTCCTGCTCCATTAACA | + |
|
Preference number: 5 (lower is better) Translates to: GHPAAPYPEAAEGLQ*PSWRSPAAVPAPLT Trigger: TGTTAATGGAGCAGGAACGGCAGCAGGAGATCGCCAAGATGGGCACTGCAGTCCCTCGGCCGCCTCAGGATATGGGGCAGCTGGGTGTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025774.11 ENSMUST00000235182.2 |
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| CDS CCA 90 bp | GCTGCCCCATATCCTGAGGCGGCCGAGGGACTGCAGTGCCCATCTTaGCGATCTCCTGCTGCCGTTCCTGCTCCATTAACACAGCTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: AAPYPEAAEGLQCPS*RSPAAVPAPLTQLP Trigger: AGGCAGCTGTGTTAATGGAGCAGGAACGGCAGCAGGAGATCGCCAAGATGGGCACTGCAGTCCCTCGGCCGCCTCAGGATATGGGGCAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025774.11 ENSMUST00000235182.2 |
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| CDS CCA 90 bp | CCTGCTGCTCCCGAACGTGCTCCTCGTACTTCTGCGTCATGGCCATaGGGTCCAACTCCAATTCCTCAGGCGCCAGCGCTACTTCCACAC | + |
|
Preference number: 5 (lower is better) Translates to: PAAPERAPRTSASWP*GPTPIPQAPALLPH Trigger: GTGTGGAAGTAGCGCTGGCGCCTGAGGAATTGGAGTTGGACCCCATGGCCATGACGCAGAAGTACGAGGAGCACGTTCGGGAGCAGCAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025774.11 |
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| CDS GCA 90 bp | GCTGCCTGCTTGGCACGCTCCTCTTGCTGCATCAGCAAAGCTGCCTaGTGCTGTGCCAGCTTCAGCCGTTCTTCTTCTGACAGCGCCACA | + |
|
Preference number: 5 (lower is better) Translates to: AACLARSSCCISKAA*CCASFSRSSSDSAT Trigger: TGTGGCGCTGTCAGAAGAAGAACGGCTGAAGCTGGCACAGCAGCAGGCAGCTTTGCTGATGCAGCAAGAGGAGCGTGCCAAGCAGGCAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025774.11 ENSMUST00000235182.2 |
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| CDS GCA 90 bp | GCCTTGAGGTGGACCAAGAGCTTGGGGTCCTGTGCCGTCACGTCATaGATCTCCACAACATCAGGCCGGGCCACCAGCTGCTTGAGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: ALRWTKSLGSCAVTS*ISTTSGRATSCLSS Trigger: AGAACTCAAGCAGCTGGTGGCCCGGCCTGATGTTGTGGAGATGCATGACGTGACGGCACAGGACCCCAAGCTCTTGGTCCACCTCAAGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025774.11 |
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| CDS GCA 90 bp | ACACGTCCCCATAGAGCGGCTTCCCAGTCTCATCCACTGGGGGTTTaGCCCAGCCACCAGCATGGTATCCAAAGGAGCAGCTCTCAGGGA | + |
|
Preference number: 5 (lower is better) Translates to: TRPHRAASQSHPLGV*PSHQHGIQRSSSQG Trigger: TCCCTGAGAGCTGCTCCTTTGGATACCATGCTGGTGGCTGGGGCAAACCCCCAGTGGATGAGACTGGGAAGCCGCTCTATGGGGACGTGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025774.11 |
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| CDS GCA 90 bp | GGGTCCAACTCCAATTCCTCAGGCGCCAGCGCTACTTCCACACCTTaGAATTCAGGGGCTGGGCCCTTCCGGCTCATAACCGTGGACATG | + |
|
Preference number: 5 (lower is better) Translates to: GSNSNSSGASATSTP*NSGAGPFRLITVDM Trigger: CATGTCCACGGTTATGAGCCGGAAGGGCCCAGCCCCTGAATTGCAAGGTGTGGAAGTAGCGCTGGCGCCTGAGGAATTGGAGTTGGACCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025774.11 |
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| CDS CCA 90 bp | GCCCCGTTTGCCTTGAAGGTACTTGCGCTTAAAACACCAGTGGCGTaGCACAGGGACGGAGTTCCGGGTGGCCTTGAGGTGGACCAAGAG | + |
|
Preference number: 5 (lower is better) Translates to: APFALKVLALKTPVA*HRDGVPGGLEVDQE Trigger: CTCTTGGTCCACCTCAAGGCCACCCGGAACTCCGTCCCTGTGCCACGCCACTGGTGTTTTAAGCGCAAGTACCTTCAAGGCAAACGGGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025774.11 |
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| CDS CCA 90 bp | CTTGTGCCTGCTGCTCCCGAACGTGCTCCTCGTACTTCTGCGTCATaGCCATGGGGTCCAACTCCAATTCCTCAGGCGCCAGCGCTACTT | + |
|
Preference number: 5 (lower is better) Translates to: LVPAAPERAPRTSAS*PWGPTPIPQAPALL Trigger: AAGTAGCGCTGGCGCCTGAGGAATTGGAGTTGGACCCCATGGCCATGACGCAGAAGTACGAGGAGCACGTTCGGGAGCAGCAGGCACAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025774.11 |
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| CDS TCA 90 bp | CCTCAGCTCAATGAGTTCAGGGGTCTCCATCCCAGCTGGCACGGATaGGAATCCTCCGGGAGTGATGAGGCCGCTGTCTGCAGGTGTGAT | + |
|
Preference number: 5 (lower is better) Translates to: PQLNEFRGLHPSWHG*ESSGSDEAAVCRCD Trigger: ATCACACCTGCAGACAGCGGCCTCATCACTCCCGGAGGATTCTCATCCGTGCCAGCTGGGATGGAGACCCCTGAACTCATTGAGCTGAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025774.11 |
||
| CDS GCA 90 bp | TTCTCTACTTGTGCCTGCTGCTCCCGAACGTGCTCCTCGTACTTCTaGGTCATGGCCATGGGGTCCAACTCCAATTCCTCAGGCGCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: FSTCACCSRTCSSYF*VMAMGSNSNSSGAS Trigger: GCTGGCGCCTGAGGAATTGGAGTTGGACCCCATGGCCATGACGCAGAAGTACGAGGAGCACGTTCGGGAGCAGCAGGCACAAGTAGAGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025774.11 |
||
| CDS-3UTR CAA 90 bp | GTCAGACCAGACCCAAAGGTACCTTCAGCAGAGCCTTCACACACAGGAGGGGTATCATCCACTGGGGGTTaGCCCCAGCCACCAGCATGG | + |
|
Preference number: 5 (lower is better) Translates to: VRPDPKVPSAEPSHTGGVSSTGG*PQPPAW Trigger: CCATGCTGGTGGCTGGGGCAAACCCCCAGTGGATGA...TACCCCTCCTGTGTGTGAAGGCTCTGCTGAAGGTACCTTTGGGTCTGGTCTGAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000025774.11 |
||
| CDS-3UTR CAA 90 bp | GTCAGACCAGACCCAAAGGTACCTTCAGCAGAGCCTTCACACACAGGAGGGGTACGCTACTTCCACACCTaGCAATTCAGGGGCTGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: VRPDPKVPSAEPSHTGGVRYFHT*QFRGWA Trigger: GGCCCAGCCCCTGAATTGCAAGGTGTGGAAGTAGCG...TACCCCTCCTGTGTGTGAAGGCTCTGCTGAAGGTACCTTTGGGTCTGGTCTGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025774.11 |
||
| CDS GCA 90 bp | AGCATGCTCAGCCACCATGTCGCTGAAGTCTTCCTTCTCTACTTGTaGCTGCTGCTCCCGAACGTGCTCCTCGTACTTCTGCGTCATGGC | + |
|
Preference number: 5 (lower is better) Translates to: SMLSHHVAEVFLLYL*LLLPNVLLVLLRHG Trigger: GCCATGACGCAGAAGTACGAGGAGCACGTTCGGGAGCAGCAGGCACAAGTAGAGAAGGAAGACTTCAGCGACATGGTGGCTGAGCATGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025774.11 |
||
| CDS CCA 90 bp | GGCTTCCCAGTCTCATCCACTGGGGGTTTGCCCCAGCCACCAGCATaGTATCCAAAGGAGCAGCTCTCAGGGATAGGTGAATTCAGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: GFPVSSTGGLPQPPA*YPKEQLSGIGEFSP Trigger: TGGACTGAATTCACCTATCCCTGAGAGCTGCTCCTTTGGATACCATGCTGGTGGCTGGGGCAAACCCCCAGTGGATGAGACTGGGAAGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025774.11 |
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| CDS-3UTR CAA 90 bp | GTCAGACCAGACCCAAAGGTACCTTCAGCAGAGCCTTCACACACAGGAGGGGTAAAAGCCTGGGGGATCTaGGGGCCCACAGAAGGATCA | + |
|
Preference number: 5 (lower is better) Translates to: VRPDPKVPSAEPSHTGGVKAWGI*GPTEGS Trigger: TGATCCTTCTGTGGGCCCCAAGATCCCCCAGGCTTT...TACCCCTCCTGTGTGTGAAGGCTCTGCTGAAGGTACCTTTGGGTCTGGTCTGAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000025774.11 |
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| CDS CCA 90 bp | CATAGGAGGAGGAGCCGCTTTGTCCCCATCTTCTCCTCTCAAAACTaGTCGATTCAGGACAATGCCCGTCTGACGGGTGTAGGTCTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: HRRRSRFVPIFSSQN*SIQDNARLTGVGLQ Trigger: CTGCAGACCTACACCCGTCAGACGGGCATTGTCCTGAATCGACCAGTTTTGAGAGGAGAAGATGGGGACAAAGCGGCTCCTCCTCCTATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025774.11 ENSMUST00000235182.2 |
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| CDS-3UTR CAA 90 bp | CCAAAGGTACCTTCAGCAGAGCCTTCACACACAGGAGGGGTAGGGATAGTGAACTCAAAGCCCTTCTTCTaGGGGACTGCAGAGCTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: PKVPSAEPSHTGGVGIVNSKPFF*GTAELS Trigger: GGAGAGCTCTGCAGTCCCCAAGAAGAAGGGCTTTGA...GTTCACTATCCCTACCCCTCCTGTGTGTGAAGGCTCTGCTGAAGGTACCTTTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025774.11 |
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| CDS-3UTR CAA 90 bp | CCAAAGGTACCTTCAGCAGAGCCTTCACACACAGGAGGGGTAGGGATAGTGAACTCATCGTCACTGTCCTaGTGCTCCTCCTCAAAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: PKVPSAEPSHTGGVGIVNSSSLS*CSSSKP Trigger: GGGCTTTGAGGAGGAGCACAAGGACAGTGACGATGA...GTTCACTATCCCTACCCCTCCTGTGTGTGAAGGCTCTGCTGAAGGTACCTTTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025774.11 |
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| CDS CCA 90 bp | TGTCATCGTCACTGTCCTTGTGCTCCTCCTCAAAGCCCTTCTTCTTaGGGACTGCAGAGCTCTCCATCTTGTCAAGCTTCTCTGGCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: CHRHCPCAPPQSPSS*GLQSSPSCQASLAP Trigger: AGGAGCCAGAGAAGCTTGACAAGATGGAGAGCTCTGCAGTCCCCAAGAAGAAGGGCTTTGAGGAGGAGCACAAGGACAGTGACGATGACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025774.11 |
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| CDS-3UTR CAA 90 bp | TCCAGATCTAGCTTTAGGGAGCCACAGAGAAAGCCCAGACATACAAAGAGCCTAGAGTTCCGGGTGGCCTaGAGGTGGACCAAGAGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: SRSSFREPQRKPRHTKSLEFRVA*RWTKSL Trigger: CAAGCTCTTGGTCCACCTCAAGGCCACCCGGAACTC...TAGGCTCTTTGTATGTCTGGGCTTTCTCTGTGGCTCCCTAAAGCTAGATCTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025774.11 |
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| CDS-3UTR CAA 90 bp | GTCAGACCAGACCCAAAGGTACCTTCAGCAGAGCCTTCACACACAGGAGGGGTAATGGTGAGTTTCGGCTaGGTCTGCCACTTGAAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: VRPDPKVPSAEPSHTGGVMVSFG*VCHLKK Trigger: CTTCTTCAAGTGGCAGACCAAGCCGAAACTCACCAT...TACCCCTCCTGTGTGTGAAGGCTCTGCTGAAGGTACCTTTGGGTCTGGTCTGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025774.11 |
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| CDS-3UTR CAA 90 bp | TCCAGATCTAGCTTTAGGGAGCCACAGAGAAAGCCCAGACATACAAAGAGCCTAAACTGCAACTCTCCTTaGGGAGGTTCGGGATGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SRSSFREPQRKPRHTKSLNCNSP*GGSGCS Trigger: GGAGCATCCCGAACCTCCCAAAGGAGAGTTGCAGTT...TAGGCTCTTTGTATGTCTGGGCTTTCTCTGTGGCTCCCTAAAGCTAGATCTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025774.11 |
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| CDS-3UTR CAA 90 bp | TCCAGATCTAGCTTTAGGGAGCCACAGAGAAAGCCCAGACATACAAAGAGCCTAGGCTTGGTCTGCCACTaGAAGAAGGCATCGTGTAGC | + |
|
Preference number: 5 (lower is better) Translates to: SRSSFREPQRKPRHTKSLGLVCH*KKASCS Trigger: GCTACACGATGCCTTCTTCAAGTGGCAGACCAAGCC...TAGGCTCTTTGTATGTCTGGGCTTTCTCTGTGGCTCCCTAAAGCTAGATCTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025774.11 |
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| CDS TCA 90 bp | TCATGGCTCCCCCAACAGTGGCTGTTCTCTTCTCTGGCAATACAGTaGATAACTGAGGTGTCTCACTTCCATCCATCGCCTCTTCGATCT | + |
|
Preference number: 5 (lower is better) Translates to: SWLPQQWLFSSLAIQ*ITEVSHFHPSPLRS Trigger: AGATCGAAGAGGCGATGGATGGAAGTGAGACACCTCAGTTATTCACTGTATTGCCAGAGAAGAGAACAGCCACTGTTGGGGGAGCCATGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025774.11 |
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| CDS-3UTR CAA 90 bp | AGAGAGAGGTTCAAGAGCGCCTGTATTCATCCTTCCTTGGGAAACAGCTTTATTCTTGGCACGCTCCTCTaGCTGCATCAGCAAAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: RERFKSACIHPSLGNSFILGTLL*LHQQSC Trigger: GCAGCTTTGCTGATGCAGCAAGAGGAGCGTGCCAAG...AATAAAGCTGTTTCCCAAGGAAGGATGAATACAGGCGCTCTTGAACCTCTCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025774.11 |
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| CDS-3UTR CAA 90 bp | GGTTCAAGAGCGCCTGTATTCATCCTTCCTTGGGAAACAGCTTTATTTACAAAAGGAGGAGGAGCCGCTTaGTCCCCATCTTCTCCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: GSRAPVFILPWETALFTKGGGAA*SPSSPL Trigger: GAGAGGAGAAGATGGGGACAAAGCGGCTCCTCCTCC...TTTTGTAAATAAAGCTGTTTCCCAAGGAAGGATGAATACAGGCGCTCTTGAACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025774.11 |
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| CDS-3UTR CAA 90 bp | GGTTCAAGAGCGCCTGTATTCATCCTTCCTTGGGAAACAGCTTTATTTACAAAAAACACAGCTGCCTGCTaGGCACGCTCCTCTTGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: GSRAPVFILPWETALFTKNTAAC*ARSSCC Trigger: GCAGCAAGAGGAGCGTGCCAAGCAGGCAGCTGTGTT...TTTTGTAAATAAAGCTGTTTCCCAAGGAAGGATGAATACAGGCGCTCTTGAACC 49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000025774.11 |
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| CDS-3UTR CAA 90 bp | CAGCCTAGCCACGGTGCTAAGCTGGCTATTTTTATTCCCCACGGACAAAGCAGTCGGTTTTTCTCTTTTTaGGATATGGACACCGTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: QPSHGAKLAIFIPHGQSSRFFSF*DMDTVS Trigger: GGACACGGTGTCCATATCCAAAAAAGAGAAAAACCG...ACTGCTTTGTCCGTGGGGAATAAAAATAGCCAGCTTAGCACCGTGGCTAGGCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENSMUST00000025774.11 |
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| CDS-3UTR CAA 90 bp | AGAGAGAGGTTCAAGAGCGCCTGTATTCATCCTTCCTTGGGAAACAGCTTTATTGCAGAGCTCTCCATCTaGTCAAGCTTCTCTGGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: RERFKSACIHPSLGNSFIAELSI*SSFSGS Trigger: GGAGCCAGAGAAGCTTGACAAGATGGAGAGCTCTGC...AATAAAGCTGTTTCCCAAGGAAGGATGAATACAGGCGCTCTTGAACCTCTCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025774.11 |
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| CDS-3UTR CAA 90 bp | TACAGGCAAGAAGTAGATGCTTTTGCAGAAGCTAAAAGAGAGAGAGGTTCAAGACGGGCCACCAGCTGCTaGAGTTCTGCCACAGTAAAA | + |
|
Preference number: 5 (lower is better) Translates to: YRQEVDAFAEAKRERGSRRATSC*SSATVK Trigger: TTTTACTGTGGCAGAACTCAAGCAGCTGGTGGCCCG...TCTTGAACCTCTCTCTCTTTTAGCTTCTGCAAAAGCATCTACTTCTTGCCTGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025774.11 |
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| CDS-3UTR CAA 90 bp | AGCCACGGTGCTAAGCTGGCTATTTTTATTCCCCACGGACAAAGCAGTAAGGTCACATCATCAGTTAGCTaGAAAGCCTCAAAAATCCTC | + |
|
Preference number: 5 (lower is better) Translates to: SHGAKLAIFIPHGQSSKVTSSVS*KASKIL Trigger: GAGGATTTTTGAGGCTTTCAAGCTAACTGATGATGT...GACCTTACTGCTTTGTCCGTGGGGAATAAAAATAGCCAGCTTAGCACCGTGGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000025774.11 |
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| CDS-3UTR CAA 90 bp | CAAGAAGTAGATGCTTTTGCAGAAGCTAAAAGAGAGAGAGGTTCAAGAGCGCCTAATGCCCCGTTTGCCTaGAAGGTACTTGCGCTTAAA | + |
|
Preference number: 5 (lower is better) Translates to: QEVDAFAEAKRERGSRAPNAPFA*KVLALK Trigger: TTTAAGCGCAAGTACCTTCAAGGCAAACGGGGCATT...AGGCGCTCTTGAACCTCTCTCTCTTTTAGCTTCTGCAAAAGCATCTACTTCTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000025774.11 |
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| CDS-3UTR CAA 90 bp | CAGAACTACAGTCCCATAGTCCTATGGGCCATCTGTGATTACAGGCAAGAAGTAGCCTCAAAAATCCTCTaGAAGAAGATGAAATTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: QNYSPIVLWAICDYRQEVASKIL*KKMKLG Trigger: GCCCAATTTCATCTTCTTCAAGAGGATTTTTGAGGC...TACTTCTTGCCTGTAATCACAGATGGCCCATAGGACTATGGGACTGTAGTTCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025774.11 |
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| CDS TCA 72 bp | CCCAGAGGAGTACGGACACCCAGCTGCCCCATATCCTaGGGCGGCCGAGGGACTGCAGTGCCCATCTTGGCG | + |
|
Preference number: 6 (lower is better) Translates to: PRGVRTPSCPIS*GGRGTAVPILA Trigger: CGCCAAGATGGGCACTGCAGTCCCTCGGCCGCCTCAGGATATGGGGCAGCTGGGTGTCCGTACTCCTCTGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025774.11 ENSMUST00000235182.2 |
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| CDS GCA 72 bp | CTCCTCGCGACTCCCCTGGATCGGCGCTCCTATCTCTaGCAATCTGGCCTGAAGCTCCTGCGCAGCCCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: LLATPLDRRSYL*QSGLKLLRSPG Trigger: GCCTGGGCTGCGCAGGAGCTTCAGGCCAGATTGGCAGAGATAGGAGCGCCGATCCAGGGGAGTCGCGAGGAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025774.11 ENSMUST00000235182.2 |
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| CDS CCA 72 bp | GGGCAAAACCGTAGGCGTGGGAACCACAGGGCCTACTaGAGCAGCGCGAGGCCCCAGAGGAGTACGGACACC | + |
|
Preference number: 6 (lower is better) Translates to: GQNRRRGNHRAY*SSARPQRSTDT Trigger: GGTGTCCGTACTCCTCTGGGGCCTCGCGCTGCTCCAGTAGGCCCTGTGGTTCCCACGCCTACGGTTTTGCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000235182.2 |
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| CDS TCA 72 bp | AGTGGCGTGGCACAGGGACGGAGTTCCGGGTGGCCTTaGGGTGGACCAAGAGCTTGGGGTCCTGTGCCGTCA | + |
|
Preference number: 6 (lower is better) Translates to: SGVAQGRSSGWP*GGPRAWGPVPS Trigger: TGACGGCACAGGACCCCAAGCTCTTGGTCCACCTCAAGGCCACCCGGAACTCCGTCCCTGTGCCACGCCACT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025774.11 |
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| CDS GCA 72 bp | GCTGCCCCATATCCTGAGGCGGCCGAGGGACTGCAGTaGCCATCTTGGCGATCTCCTGCTGCCGTTCCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: AAPYPEAAEGLQ*PSWRSPAAVPA Trigger: AGCAGGAACGGCAGCAGGAGATCGCCAAGATGGGCACTGCAGTCCCTCGGCCGCCTCAGGATATGGGGCAGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025774.11 ENSMUST00000235182.2 |
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| CDS GCA 72 bp | ACCCAGCTGCCCCATATCCTGAGGCGGCCGAGGGACTaGAGTGCCCATCTTGGCGATCTCCTGCTGCCGTTC | + |
|
Preference number: 6 (lower is better) Translates to: TQLPHILRRPRD*SAHLGDLLLPF Trigger: GAACGGCAGCAGGAGATCGCCAAGATGGGCACTGCAGTCCCTCGGCCGCCTCAGGATATGGGGCAGCTGGGT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025774.11 ENSMUST00000235182.2 |
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| CDS CCA 72 bp | GGGCAAAACCGTAGGCGTGGGAACCACAGGGCCTACTaGAGCAGCTACGCGAGGCCCCAGAGGAGTACGGAC | + |
|
Preference number: 6 (lower is better) Translates to: GQNRRRGNHRAY*SSYARPQRSTD Trigger: GTCCGTACTCCTCTGGGGCCTCGCGTAGCTGCTCCAGTAGGCCCTGTGGTTCCCACGCCTACGGTTTTGCCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025774.11 |
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| CDS CCA 72 bp | CGTGGCACAGGGACGGAGTTCCGGGTGGCCTTGAGGTaGACCAAGAGCTTGGGGTCCTGTGCCGTCACGTCA | + |
|
Preference number: 6 (lower is better) Translates to: RGTGTEFRVALR*TKSLGSCAVTS Trigger: TGACGTGACGGCACAGGACCCCAAGCTCTTGGTCCACCTCAAGGCCACCCGGAACTCCGTCCCTGTGCCACG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025774.11 |
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| CDS CAA 90 bp | GGCACAGGGACGGAGTTCCGGGTGGCCTTGAGGTGGACCAAGAGCTaGGGGTCCTGTGCCGTCACGTCATGCATCTCCACAACATCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: GTGTEFRVALRWTKS*GSCAVTSCISTTSG Trigger: GCCTGATGTTGTGGAGATGCATGACGTGACGGCACAGGACCCCAAGCTCTTGGTCCACCTCAAGGCCACCCGGAACTCCGTCCCTGTGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025774.11 |
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| CDS GCA 72 bp | GGCCGAGGGACTGCAGTGCCCATCTTGGCGATCTCCTaGTGCCGTTCCTGCTCCATTAACACAGCTGCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: GRGTAVPILAIS*CRSCSINTAAC Trigger: GCAGGCAGCTGTGTTAATGGAGCAGGAACGGCAGCAGGAGATCGCCAAGATGGGCACTGCAGTCCCTCGGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025774.11 ENSMUST00000235182.2 |
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| CDS GCA 72 bp | TGGACCAAGAGCTTGGGGTCCTGTGCCGTCACGTCATaGATCTCCACAACATCAGGCCGGGCCACCAGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: WTKSLGSCAVTS*ISTTSGRATSC Trigger: GCAGCTGGTGGCCCGGCCTGATGTTGTGGAGATGCATGACGTGACGGCACAGGACCCCAAGCTCTTGGTCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025774.11 |
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| CDS CCA 72 bp | AGCCCAGGCTCCATAGTGGCCTGGAGGTGGAGGCGGTaGCAACTGCAACTCTCCTTTGGGAGGTTCGGGATG | + |
|
Preference number: 6 (lower is better) Translates to: SPGSIVAWRWRR*QLQLSFGRFGM Trigger: CATCCCGAACCTCCCAAAGGAGAGTTGCAGTTGCCACCGCCTCCACCTCCAGGCCACTATGGAGCCTGGGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025774.11 ENSMUST00000235182.2 |
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| CDS CAA 90 bp | TTAAAACACCAGTGGCGTGGCACAGGGACGGAGTTCCGGGTGGCCTaGAGGTGGACCAAGAGCTTGGGGTCCTGTGCCGTCACGTCATGC | + |
|
Preference number: 6 (lower is better) Translates to: LKHQWRGTGTEFRVA*RWTKSLGSCAVTSC Trigger: GCATGACGTGACGGCACAGGACCCCAAGCTCTTGGTCCACCTCAAGGCCACCCGGAACTCCGTCCCTGTGCCACGCCACTGGTGTTTTAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025774.11 |
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| CDS TCA 72 bp | TGCCTGCTGCTGTGCCAGCTTCAGCCGTTCTTCTTCTaGCAGCGCCACAGGCTCACCCACTCGAAGAGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: CLLLCQLQPFFF*QRHRLTHSKRW Trigger: CCACCTCTTCGAGTGGGTGAGCCTGTGGCGCTGTCAGAAGAAGAACGGCTGAAGCTGGCACAGCAGCAGGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025774.11 ENSMUST00000235182.2 |
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| CDS CCA 72 bp | GGTTTGGGTAGGATGGGGGTGGCCCGTATCGCTGCATaGCAATCAGCCACGGAGGAGGGACTTTGTGGGCAT | + |
|
Preference number: 6 (lower is better) Translates to: GLGRMGVARIAA*QSATEEGLCGH Trigger: ATGCCCACAAAGTCCCTCCTCCGTGGCTGATTGCCATGCAGCGATACGGGCCACCCCCATCCTACCCAAACC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025774.11 |
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| CDS CCA 72 bp | CCCGAACGTGCTCCTCGTACTTCTGCGTCATGGCCATaGGGTCCAACTCCAATTCCTCAGGCGCCAGCGCTA | + |
|
Preference number: 6 (lower is better) Translates to: PERAPRTSASWP*GPTPIPQAPAL Trigger: TAGCGCTGGCGCCTGAGGAATTGGAGTTGGACCCCATGGCCATGACGCAGAAGTACGAGGAGCACGTTCGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025774.11 |
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| CDS CAA 72 bp | ACGGAGTTCCGGGTGGCCTTGAGGTGGACCAAGAGCTaGGGGTCCTGTGCCGTCACGTCATGCATCTCCACA | + |
|
Preference number: 6 (lower is better) Translates to: TEFRVALRWTKS*GSCAVTSCIST Trigger: TGTGGAGATGCATGACGTGACGGCACAGGACCCCAAGCTCTTGGTCCACCTCAAGGCCACCCGGAACTCCGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025774.11 |
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| CDS CAA 90 bp | GGGGTCCAACTCCAATTCCTCAGGCGCCAGCGCTACTTCCACACCTaGCAATTCAGGGGCTGGGCCCTTCCGGCTCATAACCGTGGACAT | + |
|
Preference number: 6 (lower is better) Translates to: GVQLQFLRRQRYFHT*QFRGWALPAHNRGH Trigger: ATGTCCACGGTTATGAGCCGGAAGGGCCCAGCCCCTGAATTGCAAGGTGTGGAAGTAGCGCTGGCGCCTGAGGAATTGGAGTTGGACCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025774.11 |
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| CDS TCA 72 bp | AATGAGTTCAGGGGTCTCCATCCCAGCTGGCACGGATaGGAATCCTCCGGGAGTGATGAGGCCGCTGTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: NEFRGLHPSWHG*ESSGSDEAAVC Trigger: GCAGACAGCGGCCTCATCACTCCCGGAGGATTCTCATCCGTGCCAGCTGGGATGGAGACCCCTGAACTCATT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025774.11 |
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| CDS GCA 72 bp | CGAGGGACTGCAGTGCCCATCTTGGCGATCTCCTGCTaGCGTTCCTGCTCCATTAACACAGCTGCCTGCTTG | + |
|
Preference number: 6 (lower is better) Translates to: RGTAVPILAISC*RSCSINTAACL Trigger: CAAGCAGGCAGCTGTGTTAATGGAGCAGGAACGGCAGCAGGAGATCGCCAAGATGGGCACTGCAGTCCCTCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025774.11 ENSMUST00000235182.2 |
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| CDS GCA 72 bp | CATAGAGCGGCTTCCCAGTCTCATCCACTGGGGGTTTaGCCCAGCCACCAGCATGGTATCCAAAGGAGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: HRAASQSHPLGV*PSHQHGIQRSS Trigger: GCTGCTCCTTTGGATACCATGCTGGTGGCTGGGGCAAACCCCCAGTGGATGAGACTGGGAAGCCGCTCTATG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025774.11 |
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| CDS GCA 72 bp | TCCAATTCCTCAGGCGCCAGCGCTACTTCCACACCTTaGAATTCAGGGGCTGGGCCCTTCCGGCTCATAACC | + |
|
Preference number: 6 (lower is better) Translates to: SNSSGASATSTP*NSGAGPFRLIT Trigger: GGTTATGAGCCGGAAGGGCCCAGCCCCTGAATTGCAAGGTGTGGAAGTAGCGCTGGCGCCTGAGGAATTGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025774.11 |
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| CDS CCA 72 bp | TATCCTGAGGCGGCCGAGGGACTGCAGTGCCCATCTTaGCGATCTCCTGCTGCCGTTCCTGCTCCATTAACA | + |
|
Preference number: 6 (lower is better) Translates to: YPEAAEGLQCPS*RSPAAVPAPLT Trigger: TGTTAATGGAGCAGGAACGGCAGCAGGAGATCGCCAAGATGGGCACTGCAGTCCCTCGGCCGCCTCAGGATA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025774.11 ENSMUST00000235182.2 |
||
| CDS CCA 72 bp | CAGTCCAGGGATTTTCAGGTTTGGGTAGGATGGGGGTaGCCCGTATCGCTGCATGGCAATCAGCCACGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: QSRDFQVWVGWG*PVSLHGNQPRR Trigger: CCTCCGTGGCTGATTGCCATGCAGCGATACGGGCCACCCCCATCCTACCCAAACCTGAAAATCCCTGGACTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025774.11 |
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| CDS CAA 72 bp | CTCCAATTCCTCAGGCGCCAGCGCTACTTCCACACCTaGCAATTCAGGGGCTGGGCCCTTCCGGCTCATAAC | + |
|
Preference number: 6 (lower is better) Translates to: LQFLRRQRYFHT*QFRGWALPAHN Trigger: GTTATGAGCCGGAAGGGCCCAGCCCCTGAATTGCAAGGTGTGGAAGTAGCGCTGGCGCCTGAGGAATTGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025774.11 |
||
| CDS GCA 72 bp | TGTGCCTGCTGCTCCCGAACGTGCTCCTCGTACTTCTaGGTCATGGCCATGGGGTCCAACTCCAATTCCTCA | + |
|
Preference number: 6 (lower is better) Translates to: CACCSRTCSSYF*VMAMGSNSNSS Trigger: TGAGGAATTGGAGTTGGACCCCATGGCCATGACGCAGAAGTACGAGGAGCACGTTCGGGAGCAGCAGGCACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025774.11 |
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| CDS CCA 72 bp | CGCCAGCGCTACTTCCACACCTTGCAATTCAGGGGCTaGGCCCTTCCGGCTCATAACCGTGGACATGTCATA | + |
|
Preference number: 6 (lower is better) Translates to: RQRYFHTLQFRG*ALPAHNRGHVI Trigger: TATGACATGTCCACGGTTATGAGCCGGAAGGGCCCAGCCCCTGAATTGCAAGGTGTGGAAGTAGCGCTGGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025774.11 |
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| CDS GCA 72 bp | TTGGCACGCTCCTCTTGCTGCATCAGCAAAGCTGCCTaGTGCTGTGCCAGCTTCAGCCGTTCTTCTTCTGAC | + |
|
Preference number: 6 (lower is better) Translates to: LARSSCCISKAA*CCASFSRSSSD Trigger: GTCAGAAGAAGAACGGCTGAAGCTGGCACAGCAGCAGGCAGCTTTGCTGATGCAGCAAGAGGAGCGTGCCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025774.11 ENSMUST00000235182.2 |
||
| CDS CCA 72 bp | GTCTCATCCACTGGGGGTTTGCCCCAGCCACCAGCATaGTATCCAAAGGAGCAGCTCTCAGGGATAGGTGAA | + |
|
Preference number: 6 (lower is better) Translates to: VSSTGGLPQPPA*YPKEQLSGIGE Trigger: TTCACCTATCCCTGAGAGCTGCTCCTTTGGATACCATGCTGGTGGCTGGGGCAAACCCCCAGTGGATGAGAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025774.11 |
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| CDS CAA 90 bp | AGCAGCATGCTCAGCCACCATGTCGCTGAAGTCTTCCTTCTCTACTaGTGCCTGCTGCTCCCGAACGTGCTCCTCGTACTTCTGCGTCAT | + |
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Preference number: 6 (lower is better) Translates to: SSMLSHHVAEVFLLY*CLLLPNVLLVLLRH Trigger: ATGACGCAGAAGTACGAGGAGCACGTTCGGGAGCAGCAGGCACAAGTAGAGAAGGAAGACTTCAGCGACATGGTGGCTGAGCATGCTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025774.11 |
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| CDS TCA 72 bp | CCATCGCCTCTTCGATCTTCTTCTTCCTCAGCTCAATaGGTTCAGGGGTCTCCATCCCAGCTGGCACGGATG | + |
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Preference number: 6 (lower is better) Translates to: PSPLRSSSSSAQ*VQGSPSQLARM Trigger: CATCCGTGCCAGCTGGGATGGAGACCCCTGAACTCATTGAGCTGAGGAAGAAGAAGATCGAAGAGGCGATGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025774.11 |
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| CDS GCA 72 bp | AGCCACCATGTCGCTGAAGTCTTCCTTCTCTACTTGTaGCTGCTGCTCCCGAACGTGCTCCTCGTACTTCTG | + |
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Preference number: 6 (lower is better) Translates to: SHHVAEVFLLYL*LLLPNVLLVLL Trigger: CAGAAGTACGAGGAGCACGTTCGGGAGCAGCAGGCACAAGTAGAGAAGGAAGACTTCAGCGACATGGTGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025774.11 |
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| CDS CAA 72 bp | CTCAGCCACCATGTCGCTGAAGTCTTCCTTCTCTACTaGTGCCTGCTGCTCCCGAACGTGCTCCTCGTACTT | + |
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Preference number: 6 (lower is better) Translates to: LSHHVAEVFLLY*CLLLPNVLLVL Trigger: AAGTACGAGGAGCACGTTCGGGAGCAGCAGGCACAAGTAGAGAAGGAAGACTTCAGCGACATGGTGGCTGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025774.11 |
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| CDS CAA 90 bp | CTGTCATCGTCACTGTCCTTGTGCTCCTCCTCAAAGCCCTTCTTCTaGGGGACTGCAGAGCTCTCCATCTTGTCAAGCTTCTCTGGCTCC | + |
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Preference number: 6 (lower is better) Translates to: LSSSLSLCSSSKPFF*GTAELSILSSFSGS Trigger: GGAGCCAGAGAAGCTTGACAAGATGGAGAGCTCTGCAGTCCCCAAGAAGAAGGGCTTTGAGGAGGAGCACAAGGACAGTGACGATGACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025774.11 |
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| CDS CCA 72 bp | AGGAGCCGCTTTGTCCCCATCTTCTCCTCTCAAAACTaGTCGATTCAGGACAATGCCCGTCTGACGGGTGTA | + |
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Preference number: 6 (lower is better) Translates to: RSRFVPIFSSQN*SIQDNARLTGV Trigger: TACACCCGTCAGACGGGCATTGTCCTGAATCGACCAGTTTTGAGAGGAGAAGATGGGGACAAAGCGGCTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025774.11 ENSMUST00000235182.2 |
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| CDS GCA 72 bp | CACAACATCAGGCCGGGCCACCAGCTGCTTGAGTTCTaGCACAGTAAAACGATTCATTCGGCGCAACTTCTT | + |
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Preference number: 6 (lower is better) Translates to: HNIRPGHQLLEF*HSKTIHSAQLL Trigger: AAGAAGTTGCGCCGAATGAATCGTTTTACTGTGGCAGAACTCAAGCAGCTGGTGGCCCGGCCTGATGTTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025774.11 |
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| CDS GCA 72 bp | TCATGCATCTCCACAACATCAGGCCGGGCCACCAGCTaGTTGAGTTCTGCCACAGTAAAACGATTCATTCGG | + |
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Preference number: 6 (lower is better) Translates to: SCISTTSGRATS*LSSATVKRFIR Trigger: CCGAATGAATCGTTTTACTGTGGCAGAACTCAAGCAGCTGGTGGCCCGGCCTGATGTTGTGGAGATGCATGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025774.11 |
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| CDS CAA 72 bp | TATCGCTGCATGGCAATCAGCCACGGAGGAGGGACTTaGTGGGCATTAGGTCCTACTGGCATTCCTAAGGAA | + |
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Preference number: 6 (lower is better) Translates to: YRCMAISHGGGT*WALGPTGIPKE Trigger: TTCCTTAGGAATGCCAGTAGGACCTAATGCCCACAAAGTCCCTCCTCCGTGGCTGATTGCCATGCAGCGATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025774.11 |
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| CDS CAA 90 bp | ATAGGAATCCCAGACAGCTGTGCTGACATAGGAGGAGGAGCCGCTTaGTCCCCATCTTCTCCTCTCAAAACTGGTCGATTCAGGACAATG | + |
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Preference number: 6 (lower is better) Translates to: IGIPDSCADIGGGAA*SPSSPLKTGRFRTM Trigger: CATTGTCCTGAATCGACCAGTTTTGAGAGGAGAAGATGGGGACAAAGCGGCTCCTCCTCCTATGTCAGCACAGCTGTCTGGGATTCCTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025774.11 ENSMUST00000235182.2 |
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| CDS TCA 72 bp | TGTTCTTCCTTCTCCTGCAGGGCCTCTCTCATTTCCTaGATGCCTGTGCGTTTGATGAAGTCTGGCAGCTCA | + |
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Preference number: 6 (lower is better) Translates to: CSSFSCRASLIS*MPVRLMKSGSS Trigger: TGAGCTGCCAGACTTCATCAAACGCACAGGCATTCAGGAAATGAGAGAGGCCCTGCAGGAGAAGGAAGAACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025774.11 |
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| CDS CCA 72 bp | CTTCTTCTTCCGTTTTGGTCTGAAACTCAGCAGCATTaGTTCCAAACACGTCCCCATAGAGCGGCTTCCCAG | + |
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Preference number: 6 (lower is better) Translates to: LLLPFWSETQQH*FQTRPHRAASQ Trigger: CTGGGAAGCCGCTCTATGGGGACGTGTTTGGAACCAATGCTGCTGAGTTTCAGACCAAAACGGAAGAAGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025774.11 |
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| CDS TCA 72 bp | AGCATGGTATCCAAAGGAGCAGCTCTCAGGGATAGGTaGATTCAGTCCAGGGATTTTCAGGTTTGGGTAGGA | + |
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Preference number: 6 (lower is better) Translates to: SMVSKGAALRDR*IQSRDFQVWVG Trigger: TCCTACCCAAACCTGAAAATCCCTGGACTGAATTCACCTATCCCTGAGAGCTGCTCCTTTGGATACCATGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025774.11 |
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