Pregenerated sensors for SF3B1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025982Ensembl transcript IDs: ENSMUST00000027127.14, ENSMUST00000191303.2
Found 270 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GATAGTCAGACCACATACAAAGAACAAGAATCCGTGCGTCCTGCATaGGGACGGTTAATGCTCAGTATCCATTCTGAGAAAGCAGAGCAG | + |
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Preference number: 1 (lower is better) Translates to: DSQTTYKEQESVRPA*GRLMLSIHSEKAEQ Trigger: CTGCTCTGCTTTCTCAGAATGGATACTGAGCATTAACCGTCCCCATGCAGGACGCACGGATTCTTGTTCTTTGTATGTGGTCTGACTATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
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| 3UTR CCA 90 bp | CTAAGTTACAGACAGCTTCTCCACTTTATAAGCACAGGCCAAAGTTaGACAAGAAGTAAAATATATCCTTCATGTCTGCTCATAAAGCAT | + |
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Preference number: 1 (lower is better) Translates to: LSYRQLLHFISTGQS*TRSKIYPSCLLIKH Trigger: ATGCTTTATGAGCAGACATGAAGGATATATTTTACTTCTTGTCCAACTTTGGCCTGTGCTTATAAAGTGGAGAAGCTGTCTGTAACTTAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
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| 3UTR-3UTR GCA 90 bp | TTACCTCCATCAGGAAAATGTCACTTAAGGGGTAAGCAGTCTCCTGTGAGCTGTCTCTGCATCTTCCATTaGACAGCACCCTGGTACCTA | + |
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Preference number: 2 (lower is better) Translates to: LPPSGKCHLRGKQSPVSCLCIFH*TAPWYL Trigger: TAGGTACCAGGGTGCTGTGCAATGGAAGATGCAGAG...ACAGCTCACAGGAGACTGCTTACCCCTTAAGTGACATTTTCCTGATGGAGGTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
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| 3UTR-3UTR TCA 90 bp | TTACCTCCATCAGGAAAATGTCACTTAAGGGGTAAGCAGTCTCCTGTGAGCTGTGTCTCTAATCTAATCTaGTCTTCCACCAGAGTCTTC | + |
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Preference number: 2 (lower is better) Translates to: LPPSGKCHLRGKQSPVSCVSNLI*SSTRVF Trigger: GAAGACTCTGGTGGAAGATCAGATTAGATTAGAGAC...ACAGCTCACAGGAGACTGCTTACCCCTTAAGTGACATTTTCCTGATGGAGGTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
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| 3UTR-3UTR GCA 90 bp | CAGCTTCTCCACTTTATAAGCACAGGCCAAAGTTGGACAAGAAGTAAAATATATGTGCTGGAACTGTTATaGTACACTGAGGGGAGGGGC | + |
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Preference number: 2 (lower is better) Translates to: QLLHFISTGQSWTRSKIYVLELL*YTEGRG Trigger: GCCCCTCCCCTCAGTGTAGCATAACAGTTCCAGCAC...ATATATTTTACTTCTTGTCCAACTTTGGCCTGTGCTTATAAAGTGGAGAAGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
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| 3UTR-3UTR CCA 90 bp | AAGCCAATACAGTATCTGACTGCTACATACAAGCTAAGCAAATCTAGGCATCTCTTCTTCAACAGACAGTaGCTAGCATTCAACAGGTGT | + |
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Preference number: 2 (lower is better) Translates to: KPIQYLTATYKLSKSRHLFFNRQ*LAFNRC Trigger: ACACCTGTTGAATGCTAGCCACTGTCTGTTGAAGAA...GAGATGCCTAGATTTGCTTAGCTTGTATGTAGCAGTCAGATACTGTATTGGCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
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| 3UTR-3UTR GCA 90 bp | AATAGCCCCTTAATGCTTGTTCTTCATAAACTGAACGGCATTTTGGCTTATGCTAAATCTAGGCATCTCTaGATCTTCCATTGCACAGCA | + |
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Preference number: 2 (lower is better) Translates to: NSPLMLVLHKLNGILAYAKSRHL*IFHCTA Trigger: TGCTGTGCAATGGAAGATGCAGAGATGCCTAGATTT...AGCATAAGCCAAAATGCCGTTCAGTTTATGAAGAACAAGCATTAAGGGGCTATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
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| 3UTR-3UTR TCA 90 bp | AATAGCCCCTTAATGCTTGTTCTTCATAAACTGAACGGCATTTTGGCTTATGCTAAAACAATGGGCTTTTaGCAAACAGGCCATCACTAT | + |
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Preference number: 2 (lower is better) Translates to: NSPLMLVLHKLNGILAYAKTMGF*QTGHHY Trigger: ATAGTGATGGCCTGTTTGTCAAAAGCCCATTGTTTT...AGCATAAGCCAAAATGCCGTTCAGTTTATGAAGAACAAGCATTAAGGGGCTATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
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| 3UTR-3UTR CCA 90 bp | AATAGCCCCTTAATGCTTGTTCTTCATAAACTGAACGGCATTTTGGCTTATGCTTTACCAACAAAACAATaGGCTTTTGACAAACAGGCC | + |
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Preference number: 2 (lower is better) Translates to: NSPLMLVLHKLNGILAYALPTKQ*AFDKQA Trigger: GGCCTGTTTGTCAAAAGCCCATTGTTTTGTTGGTAA...AGCATAAGCCAAAATGCCGTTCAGTTTATGAAGAACAAGCATTAAGGGGCTATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
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| 3UTR-3UTR GCA 90 bp | CAGCTTCTCCACTTTATAAGCACAGGCCAAAGTTGGACAAGAAGTAAAATATATGTCCTTGGTCACTACTaGCATTTACTGTTTAACATC | + |
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Preference number: 2 (lower is better) Translates to: QLLHFISTGQSWTRSKIYVLGHY*HLLFNI Trigger: GATGTTAAACAGTAAATGGCAGTAGTGACCAAGGAC...ATATATTTTACTTCTTGTCCAACTTTGGCCTGTGCTTATAAAGTGGAGAAGCTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
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| 3UTR-3UTR TCA 90 bp | CAGCTTCTCCACTTTATAAGCACAGGCCAAAGTTGGACAAGAAGTAAAATATATTTTGAGAAATCAAGGTaGAAGGTGCTATGTAAGTAC | + |
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Preference number: 2 (lower is better) Translates to: QLLHFISTGQSWTRSKIYFEKSR*KVLCKY Trigger: GTACTTACATAGCACCTTTCACCTTGATTTCTCAAA...ATATATTTTACTTCTTGTCCAACTTTGGCCTGTGCTTATAAAGTGGAGAAGCTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
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| 3UTR CCA 72 bp | TCTAGGCATCTCTGCATCTTCCATTGCACAGCACCCTaGTACCTAAGGATCTGCGCCCACCCTTCCGTTACA | + |
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Preference number: 3 (lower is better) Translates to: SRHLCIFHCTAP*YLRICAHPSVT Trigger: TGTAACGGAAGGGTGGGCGCAGATCCTTAGGTACCAGGGTGCTGTGCAATGGAAGATGCAGAGATGCCTAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
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| 3UTR GCA 72 bp | AAGCTAAGCAAATCTAGGCATCTCTGCATCTTCCATTaGACAGCACCCTGGTACCTAAGGATCTGCGCCCAC | + |
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Preference number: 3 (lower is better) Translates to: KLSKSRHLCIFH*TAPWYLRICAH Trigger: GTGGGCGCAGATCCTTAGGTACCAGGGTGCTGTGCAATGGAAGATGCAGAGATGCCTAGATTTGCTTAGCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
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| 3UTR-3UTR CAA 90 bp | TTACCTCCATCAGGAAAATGTCACTTAAGGGGTAAGCAGTCTCCTGTGAGCTGTTCTCTGCATCTTCCATaGCACAGCACCCTGGTACCT | + |
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Preference number: 3 (lower is better) Translates to: LPPSGKCHLRGKQSPVSCSLHLP*HSTLVP Trigger: AGGTACCAGGGTGCTGTGCAATGGAAGATGCAGAGA...ACAGCTCACAGGAGACTGCTTACCCCTTAAGTGACATTTTCCTGATGGAGGTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
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| 3UTR CCA 72 bp | TACTTAAGACAGCTCAGTCAGAGTGCTACTTTTCTATaGTGCTGGAACTGTTATGCTACACTGAGGGGAGGG | + |
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Preference number: 3 (lower is better) Translates to: YLRQLSQSATFL*CWNCYATLRGG Trigger: CCCTCCCCTCAGTGTAGCATAACAGTTCCAGCACCATAGAAAAGTAGCACTCTGACTGAGCTGTCTTAAGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
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| 3UTR TCA 72 bp | TCCTGCATGGGGACGGTTAATGCTCAGTATCCATTCTaGGAAAGCAGAGCAGAAGCTGTCTCTAATCTAATC | + |
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Preference number: 3 (lower is better) Translates to: SCMGTVNAQYPF*ESRAEAVSNLI Trigger: GATTAGATTAGAGACAGCTTCTGCTCTGCTTTCTCAGAATGGATACTGAGCATTAACCGTCCCCATGCAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
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| 3UTR GCA 72 bp | CCACCCCTCTGTCCCCTTAAGAACATGAATTCCTCCTaGCTAAGTTTCACCTTAAGAAACATCAAAGTGCTA | + |
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Preference number: 3 (lower is better) Translates to: PPLCPLKNMNSS*LSFTLRNIKVL Trigger: TAGCACTTTGATGTTTCTTAAGGTGAAACTTAGGCAGGAGGAATTCATGTTCTTAAGGGGACAGAGGGGTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
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| 3UTR-3UTR CAA 90 bp | CTCTTCCTTAGTCAAATGTTGTTCTCGCATAACATCCATGTAGGTTCTAGCATTCTCACTTTCGTGCCTTaGTCTCCATCAGCAGTTCTG | + |
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Preference number: 3 (lower is better) Translates to: LFLSQMLFSHNIHVGSSILTFVP*SPSAVL Trigger: CAGAACTGCTGATGGAGACAAAGGCACGAAAGTGAG...AATGCTAGAACCTACATGGATGTTATGCGAGAACAACATTTGACTAAGGAAGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191303.2 |
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| 3UTR TCA 72 bp | AAGCTACTCTTCATTACCAACAAAACAATGGGCTTTTaGCAAACAGGCCATCACTATATAGTTTGCGTGCTG | + |
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Preference number: 3 (lower is better) Translates to: KLLFITNKTMGF*QTGHHYIVCVL Trigger: CAGCACGCAAACTATATAGTGATGGCCTGTTTGTCAAAAGCCCATTGTTTTGTTGGTAATGAAGAGTAGCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
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| 3UTR GCA 72 bp | AAGTACAAAATAATACTTAAGACAGCTCAGTCAGAGTaGTACTTTTCTATGGTGCTGGAACTGTTATGCTAC | + |
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Preference number: 3 (lower is better) Translates to: KYKIILKTAQSE*YFSMVLELLCY Trigger: GTAGCATAACAGTTCCAGCACCATAGAAAAGTAGCACTCTGACTGAGCTGTCTTAAGTATTATTTTGTACTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
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| CDS-3UTR CCA 90 bp | CGCCCACCCTTCCGTTACATGAAAGGCCGGATCATGTGCACCTTCGAAGCCCCTTGGCCCGGGGTTGCATaGCCTGGTGTGTCGCCTCGC | + |
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Preference number: 4 (lower is better) Translates to: RPPFRYMKGRIMCTFEAPWPGVA*PGVSPR Trigger: GCGAGGCGACACACCAGGCCATGCAACCCCGGGCCA...AGGGGCTTCGAAGGTGCACATGATCCGGCCTTTCATGTAACGGAAGGGTGGGCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
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| CDS-3UTR TCA 90 bp | CGCCCACCCTTCCGTTACATGAAAGGCCGGATCATGTGCACCTTCGAAGCCCCTGTGCTTCCACCCATTTaGCTCGCCGGCGTTTCATCC | + |
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Preference number: 4 (lower is better) Translates to: RPPFRYMKGRIMCTFEAPVLPPI*LAGVSS Trigger: GGATGAAACGCCGGCGAGTCAAATGGGTGGAAGCAC...AGGGGCTTCGAAGGTGCACATGATCCGGCCTTTCATGTAACGGAAGGGTGGGCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
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| CDS-3UTR GCA 90 bp | CGCCCACCCTTCCGTTACATGAAAGGCCGGATCATGTGCACCTTCGAAGCCCCTCCAAGTGACATGTGCTaGACCACTGCACTCGCTGTC | + |
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Preference number: 4 (lower is better) Translates to: RPPFRYMKGRIMCTFEAPPSDMC*TTALAV Trigger: GACAGCGAGTGCAGTGGTGCAGCACATGTCACTTGG...AGGGGCTTCGAAGGTGCACATGATCCGGCCTTTCATGTAACGGAAGGGTGGGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
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| CDS-3UTR TCA 90 bp | CGCCCACCCTTCCGTTACATGAAAGGCCGGATCATGTGCACCTTCGAAGCCCCTCTCGCTGTCTGTCTGTaGACAAGGTCCCTGTCCATT | + |
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Preference number: 4 (lower is better) Translates to: RPPFRYMKGRIMCTFEAPLAVCL*TRSLSI Trigger: AATGGACAGGGACCTTGTTCACAGACAGACAGCGAG...AGGGGCTTCGAAGGTGCACATGATCCGGCCTTTCATGTAACGGAAGGGTGGGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
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| CDS-3UTR GCA 90 bp | CGCCCACCCTTCCGTTACATGAAAGGCCGGATCATGTGCACCTTCGAAGCCCCTACACCAAGTGACATGTaGTGCACCACTGCACTCGCT | + |
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Preference number: 4 (lower is better) Translates to: RPPFRYMKGRIMCTFEAPTPSDM*CTTALA Trigger: AGCGAGTGCAGTGGTGCAGCACATGTCACTTGGTGT...AGGGGCTTCGAAGGTGCACATGATCCGGCCTTTCATGTAACGGAAGGGTGGGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
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| CDS-3UTR GCA 90 bp | CGCCCACCCTTCCGTTACATGAAAGGCCGGATCATGTGCACCTTCGAAGCCCCTGCCCATCCACTTCCATaGCCAGGAGTATCTCTTTCT | + |
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Preference number: 4 (lower is better) Translates to: RPPFRYMKGRIMCTFEAPAHPLP*PGVSLS Trigger: AGAAAGAGATACTCCTGGGCATGGAAGTGGATGGGC...AGGGGCTTCGAAGGTGCACATGATCCGGCCTTTCATGTAACGGAAGGGTGGGCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
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| CDS-3UTR GCA 90 bp | CGCCCACCCTTCCGTTACATGAAAGGCCGGATCATGTGCACCTTCGAAGCCCCTCAAAGGTGTAGGAGTTaGTGTCAGCTTTCGAGCTGG | + |
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Preference number: 4 (lower is better) Translates to: RPPFRYMKGRIMCTFEAPQRCRS*CQLSSW Trigger: CCAGCTCGAAAGCTGACAGCAACTCCTACACCTTTG...AGGGGCTTCGAAGGTGCACATGATCCGGCCTTTCATGTAACGGAAGGGTGGGCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
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| CDS-3UTR GCA 90 bp | CGCCCACCCTTCCGTTACATGAAAGGCCGGATCATGTGCACCTTCGAAGCCCCTGTCCGAACTTTCTGCTaGTCATCCACGAGACCATGT | + |
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Preference number: 4 (lower is better) Translates to: RPPFRYMKGRIMCTFEAPVRTFC*SSTRPC Trigger: ACATGGTCTCGTGGATGAGCAGCAGAAAGTTCGGAC...AGGGGCTTCGAAGGTGCACATGATCCGGCCTTTCATGTAACGGAAGGGTGGGCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
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| CDS-3UTR CCA 90 bp | CGCCCACCCTTCCGTTACATGAAAGGCCGGATCATGTGCACCTTCGAAGCCCCTGGCTGGTGTGCCAATTaGTGTTTTTCCTGGAGTCAG | + |
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Preference number: 4 (lower is better) Translates to: RPPFRYMKGRIMCTFEAPGWCAN*CFSWSQ Trigger: CTGACTCCAGGAAAAACACCAATTGGCACACCAGCC...AGGGGCTTCGAAGGTGCACATGATCCGGCCTTTCATGTAACGGAAGGGTGGGCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
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| CDS-3UTR TCA 90 bp | CGCCCACCCTTCCGTTACATGAAAGGCCGGATCATGTGCACCTTCGAAGCCCCTGCTGCCTTCTTGCCTTaGATTTCTCGAATCTGTGCT | + |
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Preference number: 4 (lower is better) Translates to: RPPFRYMKGRIMCTFEAPAAFLP*ISRICA Trigger: AGCACAGATTCGAGAAATTCAAGGCAAGAAGGCAGC...AGGGGCTTCGAAGGTGCACATGATCCGGCCTTTCATGTAACGGAAGGGTGGGCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
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| CDS-3UTR TCA 90 bp | CCAGAGTCTTCCTTGTTAACAGTCAGAAGCACAAGCTGCCTAGCACTCCTGACAGTCTGGTCAGCGGTCTaGTCCCAGCGCCGTTTTCGT | + |
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Preference number: 4 (lower is better) Translates to: PESSLLTVRSTSCLALLTVWSAV*SQRRFR Trigger: ACGAAAACGGCGCTGGGATCAGACCGCTGACCAGAC...TGTCAGGAGTGCTAGGCAGCTTGTGCTTCTGACTGTTAACAAGGAAGACTCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
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| CDS-3UTR GCA 90 bp | CGCCCACCCTTCCGTTACATGAAAGGCCGGATCATGTGCACCTTCGAAGCCCCTCTCCCCTGTCAGCAATaGGTCCAACAAGATCAATAC | + |
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Preference number: 4 (lower is better) Translates to: RPPFRYMKGRIMCTFEAPLPCQQ*VQQDQY Trigger: GTATTGATCTTGTTGGACGCATTGCTGACAGGGGAG...AGGGGCTTCGAAGGTGCACATGATCCGGCCTTTCATGTAACGGAAGGGTGGGCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
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| CDS-3UTR CCA 90 bp | CGCCCACCCTTCCGTTACATGAAAGGCCGGATCATGTGCACCTTCGAAGCCCCTGGTCATAATAACCTGTaGAATCAAGGCCCACTCCTT | + |
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Preference number: 4 (lower is better) Translates to: RPPFRYMKGRIMCTFEAPGHNNL*NQGPLL Trigger: AAGGAGTGGGCCTTGATTCCACAGGTTATTATGACC...AGGGGCTTCGAAGGTGCACATGATCCGGCCTTTCATGTAACGGAAGGGTGGGCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
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| CDS-3UTR CCA 90 bp | CGCCCACCCTTCCGTTACATGAAAGGCCGGATCATGTGCACCTTCGAAGCCCCTCAAACTTCTGAGATGTaGCAAGATAGCACAGCCCAT | + |
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Preference number: 4 (lower is better) Translates to: RPPFRYMKGRIMCTFEAPQTSEM*QDSTAH Trigger: ATGGGCTGTGCTATCTTGCCACATCTCAGAAGTTTG...AGGGGCTTCGAAGGTGCACATGATCCGGCCTTTCATGTAACGGAAGGGTGGGCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
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| CDS-3UTR CCA 90 bp | GGATCGGGAGTCTTCCCTCACTTTCGTGCCTTTGTCTCCATCAGCAGTTCTGACGACCGAGCAAGCTCGTaGATGATGAGTAGTCATCGT | + |
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Preference number: 4 (lower is better) Translates to: GSGVFPHFRAFVSISSSDDRASS*MMSSHR Trigger: ACGATGACTACTCATCATCCACGAGCTTGCTCGGTC...GTCAGAACTGCTGATGGAGACAAAGGCACGAAAGTGAGGGAAGACTCCCGATCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191303.2 |
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| CDS-3UTR CCA 90 bp | CGCCCACCCTTCCGTTACATGAAAGGCCGGATCATGTGCACCTTCGAAGCCCCTCTGGGGAAATTATCATaGTCCGCCTATGCTTTTTGT | + |
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Preference number: 4 (lower is better) Translates to: RPPFRYMKGRIMCTFEAPLGKLS*SAYAFC Trigger: ACAAAAAGCATAGGCGGACCATGATAATTTCCCCAG...AGGGGCTTCGAAGGTGCACATGATCCGGCCTTTCATGTAACGGAAGGGTGGGCG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
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| CDS-3UTR CCA 90 bp | CGCCCACCCTTCCGTTACATGAAAGGCCGGATCATGTGCACCTTCGAAGCCCCTAATCTGGTTAAACAGTaGTCCAGCTCCAAATTCTCG | + |
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Preference number: 4 (lower is better) Translates to: RPPFRYMKGRIMCTFEAPNLVKQ*SSSKFS Trigger: CGAGAATTTGGAGCTGGACCACTGTTTAACCAGATT...AGGGGCTTCGAAGGTGCACATGATCCGGCCTTTCATGTAACGGAAGGGTGGGCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
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| CDS-3UTR CCA 90 bp | CGCCCACCCTTCCGTTACATGAAAGGCCGGATCATGTGCACCTTCGAAGCCCCTGTCATTGTAGATTCGTaGGTAATGTGCTATGAGAGC | + |
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Preference number: 4 (lower is better) Translates to: RPPFRYMKGRIMCTFEAPVIVDS*VMCYES Trigger: GCTCTCATAGCACATTACCCACGAATCTACAATGAC...AGGGGCTTCGAAGGTGCACATGATCCGGCCTTTCATGTAACGGAAGGGTGGGCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
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| CDS-3UTR TCA 90 bp | CCAGAGTCTTCCTTGTTAACAGTCAGAAGCACAAGCTGCCTAGCACTCCTGACAGCTTCGATATCTTCGTaGGTCTTGGCGATCTTCGCC | + |
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Preference number: 4 (lower is better) Translates to: PESSLLTVRSTSCLALLTASISS*VLAIFA Trigger: GGCGAAGATCGCCAAGACTCACGAAGATATCGAAGC...TGTCAGGAGTGCTAGGCAGCTTGTGCTTCTGACTGTTAACAAGGAAGACTCTGG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
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| CDS-3UTR GCA 90 bp | CGCCCACCCTTCCGTTACATGAAAGGCCGGATCATGTGCACCTTCGAAGCCCCTAAGTCAGCTGCTTGTTaGCTAACTTTTGCTGATTTG | + |
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Preference number: 4 (lower is better) Translates to: RPPFRYMKGRIMCTFEAPKSAAC*LTFADL Trigger: CAAATCAGCAAAAGTTAGGCAACAAGCAGCTGACTT...AGGGGCTTCGAAGGTGCACATGATCCGGCCTTTCATGTAACGGAAGGGTGGGCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
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| CDS-3UTR CCA 90 bp | CGCCCACCCTTCCGTTACATGAAAGGCCGGATCATGTGCACCTTCGAAGCCCCTAGATTCCCAGATGGCTaGTCATTGACACTTTTCATA | + |
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Preference number: 4 (lower is better) Translates to: RPPFRYMKGRIMCTFEAPRFPDG*SLTLFI Trigger: TATGAAAAGTGTCAATGACCAGCCATCTGGGAATCT...AGGGGCTTCGAAGGTGCACATGATCCGGCCTTTCATGTAACGGAAGGGTGGGCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
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| CDS-3UTR TCA 90 bp | CGCCCACCCTTCCGTTACATGAAAGGCCGGATCATGTGCACCTTCGAAGCCCCTTTCTGGACTAAGTGTTaGTTCATCTACATCAACCAA | + |
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Preference number: 4 (lower is better) Translates to: RPPFRYMKGRIMCTFEAPFWTKC*FIYINQ Trigger: TTGGTTGATGTAGATGAATCAACACTTAGTCCAGAA...AGGGGCTTCGAAGGTGCACATGATCCGGCCTTTCATGTAACGGAAGGGTGGGCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
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| CDS-3UTR TCA 90 bp | CGCCCACCCTTCCGTTACATGAAAGGCCGGATCATGTGCACCTTCGAAGCCCCTACTGAAATTCTCGAATaGGGATTAACATCACTTCTC | + |
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Preference number: 4 (lower is better) Translates to: RPPFRYMKGRIMCTFEAPTEILE*GLTSLL Trigger: GAGAAGTGATGTTAATCCTCATTCGAGAATTTCAGT...AGGGGCTTCGAAGGTGCACATGATCCGGCCTTTCATGTAACGGAAGGGTGGGCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
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| CDS-3UTR GCA 90 bp | TTACCTCCATCAGGAAAATGTCACTTAAGGGGTAAGCAGTCTCCTGTGAGCTGTGGGAGGCTGGGATGCTaGTGCTCCATTGACGACTTT | + |
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Preference number: 4 (lower is better) Translates to: LPPSGKCHLRGKQSPVSCGRLGC*CSIDDF Trigger: AAAGTCGTCAATGGAGCAGCAGCATCCCAGCCTCCC...ACAGCTCACAGGAGACTGCTTACCCCTTAAGTGACATTTTCCTGATGGAGGTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
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| CDS-3UTR GCA 90 bp | ATATCCCTCCAGTATAGTGTGTATAAGCACTGTCCTTGGTCACTACTGCCATTTACGAGCACTGGAAGTTaGACCACCATGGCCCGGGGT | + |
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Preference number: 4 (lower is better) Translates to: ISLQYSVYKHCPWSLLPFTSTGS*TTMARG Trigger: ACCCCGGGCCATGGTGGTGCAACTTCCAGTGCTCGT...AAATGGCAGTAGTGACCAAGGACAGTGCTTATACACACTATACTGGAGGGATAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
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| CDS-3UTR GCA 90 bp | CGCCCACCCTTCCGTTACATGAAAGGCCGGATCATGTGCACCTTCGAAGCCCCTGTAGTTGGCATATTCTaGATCCATAAGAGGAATAAG | + |
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Preference number: 4 (lower is better) Translates to: RPPFRYMKGRIMCTFEAPVVGIF*IHKRNK Trigger: CTTATTCCTCTTATGGATGCAGAATATGCCAACTAC...AGGGGCTTCGAAGGTGCACATGATCCGGCCTTTCATGTAACGGAAGGGTGGGCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
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| CDS-3UTR GCA 90 bp | TTACCTCCATCAGGAAAATGTCACTTAAGGGGTAAGCAGTCTCCTGTGAGCTGTCATGTGCTGCACCACTaGACTCGCTGTCTGTCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: LPPSGKCHLRGKQSPVSCHVLHH*TRCLSV Trigger: CACAGACAGACAGCGAGTGCAGTGGTGCAGCACATG...ACAGCTCACAGGAGACTGCTTACCCCTTAAGTGACATTTTCCTGATGGAGGTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
||
| CDS-3UTR CCA 90 bp | CAGCTTCTCCACTTTATAAGCACAGGCCAAAGTTGGACAAGAAGTAAAATATATCGGGGTTGCATGGCCTaGTGTGTCGCCTCGCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: QLLHFISTGQSWTRSKIYRGCMA*CVASPR Trigger: CCTGGGCGAGGCGACACACCAGGCCATGCAACCCCG...ATATATTTTACTTCTTGTCCAACTTTGGCCTGTGCTTATAAAGTGGAGAAGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
||
| CDS-3UTR CCA 90 bp | CCAGAGTCTTCCTTGTTAACAGTCAGAAGCACAAGCTGCCTAGCACTCCTGACAGCTCATTATGTGACCTaGAGTCGGGGTAGCCATGTT | + |
|
Preference number: 4 (lower is better) Translates to: PESSLLTVRSTSCLALLTAHYVT*SRGSHV Trigger: AACATGGCTACCCCGACTCCAGGTCACATAATGAGC...TGTCAGGAGTGCTAGGCAGCTTGTGCTTCTGACTGTTAACAAGGAAGACTCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
||
| CDS-3UTR CCA 90 bp | CGCCCACCCTTCCGTTACATGAAAGGCCGGATCATGTGCACCTTCGAAGCCCCTTTCATCAATCAACAGTaGCTCGATAACCACAAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: RPPFRYMKGRIMCTFEAPFINQQ*LDNHKN Trigger: ATTCTTGTGGTTATCGAGCCACTGTTGATTGATGAA...AGGGGCTTCGAAGGTGCACATGATCCGGCCTTTCATGTAACGGAAGGGTGGGCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
||
| CDS-3UTR TCA 90 bp | TTAGGATCGGGAGTCTTCCCTCACTTTCGTGCCTTTGTCTCCATCAGCAGTTCTGCTGCCTTCTTGCCTTaGATTTCTCGAATCTGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LGSGVFPHFRAFVSISSSAAFLP*ISRICA Trigger: AGCACAGATTCGAGAAATTCAAGGCAAGAAGGCAGC...AGAACTGCTGATGGAGACAAAGGCACGAAAGTGAGGGAAGACTCCCGATCCTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191303.2 |
||
| CDS-3UTR CCA 90 bp | CCAGAGTCTTCCTTGTTAACAGTCAGAAGCACAAGCTGCCTAGCACTCCTGACATGTTTTTACGAGCACTaGAAGTTGCACCACCATGGC | + |
|
Preference number: 4 (lower is better) Translates to: PESSLLTVRSTSCLALLTCFYEH*KLHHHG Trigger: GCCATGGTGGTGCAACTTCCAGTGCTCGTAAAAACA...TGTCAGGAGTGCTAGGCAGCTTGTGCTTCTGACTGTTAACAAGGAAGACTCTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
||
| CDS-3UTR CCA 90 bp | CCAGAGTCTTCCTTGTTAACAGTCAGAAGCACAAGCTGCCTAGCACTCCTGACACTGCAACATTCTGCATaGTCCAATAGCAACCCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: PESSLLTVRSTSCLALLTLQHSA*SNSNPQ Trigger: CTGAGGGTTGCTATTGGACCATGCAGAATGTTGCAG...TGTCAGGAGTGCTAGGCAGCTTGTGCTTCTGACTGTTAACAAGGAAGACTCTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
||
| CDS-3UTR TCA 90 bp | ATATCCCTCCAGTATAGTGTGTATAAGCACTGTCCTTGGTCACTACTGCCATTTCCAGGGGTCTCTGCCTaGTCCCAACTCGATAGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: ISLQYSVYKHCPWSLLPFPGVSA*SQLDSF Trigger: AAAGCTATCGAGTTGGGATCAGGCAGAGACCCCTGG...AAATGGCAGTAGTGACCAAGGACAGTGCTTATACACACTATACTGGAGGGATAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
||
| CDS-3UTR TCA 90 bp | AAGCCAATACAGTATCTGACTGCTACATACAAGCTAAGCAAATCTAGGCATCTCAGGGTCCCATATTTTTaGGCCTGGGGTTGCGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: KPIQYLTATYKLSKSRHLRVPYF*AWGCAR Trigger: CCTGGCGCAACCCCAGGCTCAAAAATATGGGACCCT...GAGATGCCTAGATTTGCTTAGCTTGTATGTAGCAGTCAGATACTGTATTGGCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
||
| CDS-3UTR GCA 90 bp | TTACCTCCATCAGGAAAATGTCACTTAAGGGGTAAGCAGTCTCCTGTGAGCTGTCCAGTGTGCCTCGCTTaGCAAGACTTCTTGCTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: LPPSGKCHLRGKQSPVSCPVCLA*QDFLLL Trigger: CAAAAGCAAGAAGTCTTGGCAAGCGAGGCACACTGG...ACAGCTCACAGGAGACTGCTTACCCCTTAAGTGACATTTTCCTGATGGAGGTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
||
| CDS-3UTR CCA 90 bp | TTACCTCCATCAGGAAAATGTCACTTAAGGGGTAAGCAGTCTCCTGTGAGCTGTCCGATCGGCAATCTTTaGAGGACGATGCTCAGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: LPPSGKCHLRGKQSPVSCPIGNL*RTMLSK Trigger: TTTGCTGAGCATCGTCCTCCAAAGATTGCCGATCGG...ACAGCTCACAGGAGACTGCTTACCCCTTAAGTGACATTTTCCTGATGGAGGTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
||
| CDS-3UTR CCA 90 bp | GCATTCATTTTAGGATCGGGAGTCTTCCCTCACTTTCGTGCCTTTGTCTCCATCAGGATCAAGACGCTCTaGGGAAATTATCATGGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: AFILGSGVFPHFRAFVSIRIKTL*GNYHGP Trigger: CGGACCATGATAATTTCCCCAGAGCGTCTTGATCCT...GATGGAGACAAAGGCACGAAAGTGAGGGAAGACTCCCGATCCTAAAATGAATGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191303.2 |
||
| CDS-3UTR CCA 90 bp | CCAGAGTCTTCCTTGTTAACAGTCAGAAGCACAAGCTGCCTAGCACTCCTGACAAGCCATGTTCATGGCTaGTGTGCCAATTGGTGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: PESSLLTVRSTSCLALLTSHVHG*CANWCF Trigger: AAAACACCAATTGGCACACCAGCCATGAACATGGCT...TGTCAGGAGTGCTAGGCAGCTTGTGCTTCTGACTGTTAACAAGGAAGACTCTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
||
| CDS-3UTR CCA 90 bp | TTACCTCCATCAGGAAAATGTCACTTAAGGGGTAAGCAGTCTCCTGTGAGCTGTGCTCCCATAACTGCCTaGATTACATGGGGAGATGTC | + |
|
Preference number: 4 (lower is better) Translates to: LPPSGKCHLRGKQSPVSCAPITA*ITWGDV Trigger: GACATCTCCCCATGTAATCCAGGCAGTTATGGGAGC...ACAGCTCACAGGAGACTGCTTACCCCTTAAGTGACATTTTCCTGATGGAGGTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
||
| CDS-3UTR TCA 90 bp | AACATCCATGTAGGTTCTAGCATTCATTTTAGGATCGGGAGTCTTCCCTCACTTGCTTCGATATCTTCGTaGGTCTTGGCGATCTTCGCC | + |
|
Preference number: 4 (lower is better) Translates to: NIHVGSSIHFRIGSLPSLASISS*VLAIFA Trigger: GGCGAAGATCGCCAAGACTCACGAAGATATCGAAGC...AAGTGAGGGAAGACTCCCGATCCTAAAATGAATGCTAGAACCTACATGGATGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191303.2 |
||
| CDS-3UTR TCA 90 bp | TTACCTCCATCAGGAAAATGTCACTTAAGGGGTAAGCAGTCTCCTGTGAGCTGTAGTAAATGTCGCTCTTaGTCCTCAAGTGTAGGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: LPPSGKCHLRGKQSPVSCSKCRS*SSSVGD Trigger: GTCCCCTACACTTGAGGATCAAGAGCGACATTTACT...ACAGCTCACAGGAGACTGCTTACCCCTTAAGTGACATTTTCCTGATGGAGGTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
||
| CDS-3UTR TCA 90 bp | ATATCCCTCCAGTATAGTGTGTATAAGCACTGTCCTTGGTCACTACTGCCATTTTCCGTAAACACCAAGTaGCATGTGCTGCACCACTGC | + |
|
Preference number: 4 (lower is better) Translates to: ISLQYSVYKHCPWSLLPFSVNTK*HVLHHC Trigger: GCAGTGGTGCAGCACATGTCACTTGGTGTTTACGGA...AAATGGCAGTAGTGACCAAGGACAGTGCTTATACACACTATACTGGAGGGATAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
||
| CDS-3UTR GCA 90 bp | CCAGAGTCTTCCTTGTTAACAGTCAGAAGCACAAGCTGCCTAGCACTCCTGACAATCTTTGGAGGACGATaGTCAGCAAATGGATCATAC | + |
|
Preference number: 4 (lower is better) Translates to: PESSLLTVRSTSCLALLTIFGGR*SANGSY Trigger: GTATGATCCATTTGCTGAGCATCGTCCTCCAAAGAT...TGTCAGGAGTGCTAGGCAGCTTGTGCTTCTGACTGTTAACAAGGAAGACTCTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
||
| CDS-3UTR GCA 90 bp | ATATCCCTCCAGTATAGTGTGTATAAGCACTGTCCTTGGTCACTACTGCCATTTGCAATAAAGAAGGGATaGCCAGGGCAGAGGCTACGA | + |
|
Preference number: 4 (lower is better) Translates to: ISLQYSVYKHCPWSLLPFAIKKG*PGQRLR Trigger: TCGTAGCCTCTGCCCTGGGCATCCCTTCTTTATTGC...AAATGGCAGTAGTGACCAAGGACAGTGCTTATACACACTATACTGGAGGGATAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
||
| CDS-3UTR GCA 90 bp | TTACCTCCATCAGGAAAATGTCACTTAAGGGGTAAGCAGTCTCCTGTGAGCTGTAATACCATAAGGAGTTaGTGCCTCAGCCAAAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LPPSGKCHLRGKQSPVSCNTIRS*CLSQSS Trigger: GCTGCTTTGGCTGAGGCAGCAACTCCTTATGGTATT...ACAGCTCACAGGAGACTGCTTACCCCTTAAGTGACATTTTCCTGATGGAGGTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
||
| CDS-3UTR GCA 90 bp | CCAGAGTCTTCCTTGTTAACAGTCAGAAGCACAAGCTGCCTAGCACTCCTGACACCTAGATATGATCTCTaGTGCACCTACTTTGTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: PESSLLTVRSTSCLALLTPRYDL*CTYFVC Trigger: GCAAACAAAGTAGGTGCAGCAGAGATCATATCTAGG...TGTCAGGAGTGCTAGGCAGCTTGTGCTTCTGACTGTTAACAAGGAAGACTCTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
||
| CDS-3UTR GCA 90 bp | CCAGAGTCTTCCTTGTTAACAGTCAGAAGCACAAGCTGCCTAGCACTCCTGACACCTCATCCATTCTCTTaGAGATACATATTCAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: PESSLLTVRSTSCLALLTPHPFS*RYIFSS Trigger: GGAGCTGAATATGTATCTGCAAGAGAATGGATGAGG...TGTCAGGAGTGCTAGGCAGCTTGTGCTTCTGACTGTTAACAAGGAAGACTCTGG 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
||
| CDS-3UTR GCA 90 bp | TTAGGATCGGGAGTCTTCCCTCACTTTCGTGCCTTTGTCTCCATCAGCAGTTCTAGAATAGAAGCCATCTaGAAAAGGATCAAGACGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LGSGVFPHFRAFVSISSSRIEAI*KRIKTL Trigger: GAGCGTCTTGATCCTTTTGCAGATGGCTTCTATTCT...AGAACTGCTGATGGAGACAAAGGCACGAAAGTGAGGGAAGACTCCCGATCCTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191303.2 |
||
| CDS-3UTR CCA 90 bp | AAGCCAATACAGTATCTGACTGCTACATACAAGCTAAGCAAATCTAGGCATCTCCGTTTTGAGGGAGGCTaGGATGCTGCTGCTCCATTG | + |
|
Preference number: 4 (lower is better) Translates to: KPIQYLTATYKLSKSRHLRFEGG*DAAAPL Trigger: CAATGGAGCAGCAGCATCCCAGCCTCCCTCAAAACG...GAGATGCCTAGATTTGCTTAGCTTGTATGTAGCAGTCAGATACTGTATTGGCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
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| CDS-3UTR CCA 90 bp | CCAGAGTCTTCCTTGTTAACAGTCAGAAGCACAAGCTGCCTAGCACTCCTGACAGGCAGCCTTTCTCATTaGAGGTGTACCATTCTTAAT | + |
|
Preference number: 4 (lower is better) Translates to: PESSLLTVRSTSCLALLTGSLSH*RCTILN Trigger: ATTAAGAATGGTACACCTCCAATGAGAAAGGCTGCC...TGTCAGGAGTGCTAGGCAGCTTGTGCTTCTGACTGTTAACAAGGAAGACTCTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
||
| CDS-3UTR TCA 90 bp | AATAGCCCCTTAATGCTTGTTCTTCATAAACTGAACGGCATTTTGGCTTATGCTGTCATGCTCATTATGTaGCCTGGAGTCGGGGTAGCC | + |
|
Preference number: 4 (lower is better) Translates to: NSPLMLVLHKLNGILAYAVMLIM*PGVGVA Trigger: GGCTACCCCGACTCCAGGTCACATAATGAGCATGAC...AGCATAAGCCAAAATGCCGTTCAGTTTATGAAGAACAAGCATTAAGGGGCTATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
||
| CDS-3UTR TCA 90 bp | AAGCCAATACAGTATCTGACTGCTACATACAAGCTAAGCAAATCTAGGCATCTCCAATGGCCAGAGCACTaGTGGTCCGAACTTTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: KPIQYLTATYKLSKSRHLQWPEH*WSELSA Trigger: AGCAGAAAGTTCGGACCATCAGTGCTCTGGCCATTG...GAGATGCCTAGATTTGCTTAGCTTGTATGTAGCAGTCAGATACTGTATTGGCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
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| CDS-3UTR GCA 90 bp | CCAGAGTCTTCCTTGTTAACAGTCAGAAGCACAAGCTGCCTAGCACTCCTGACACAGACCAGCAGCCTTTaGCAAATTAGAAATAATCTC | + |
|
Preference number: 4 (lower is better) Translates to: PESSLLTVRSTSCLALLTQTSSL*QIRNNL Trigger: GAGATTATTTCTAATTTGGCAAAGGCTGCTGGTCTG...TGTCAGGAGTGCTAGGCAGCTTGTGCTTCTGACTGTTAACAAGGAAGACTCTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
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| CDS-3UTR CCA 90 bp | AGCATTCATTTTAGGATCGGGAGTCTTCCCTCACTTTCGTGCCTTTGTCTCCATGGTCATAATAACCTGTaGAATCAAGGCCCACTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: SIHFRIGSLPSLSCLCLHGHNNL*NQGPLL Trigger: AAGGAGTGGGCCTTGATTCCACAGGTTATTATGACC...ATGGAGACAAAGGCACGAAAGTGAGGGAAGACTCCCGATCCTAAAATGAATGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191303.2 |
||
| CDS-3UTR CCA 90 bp | CCAGAGTCTTCCTTGTTAACAGTCAGAAGCACAAGCTGCCTAGCACTCCTGACATTCTTCATCAGAAAGTaGGCGGTTTCGTTCATCAAT | + |
|
Preference number: 4 (lower is better) Translates to: PESSLLTVRSTSCLALLTFFIRK*AVSFIN Trigger: ATTGATGAACGAAACCGCCCACTTTCTGATGAAGAA...TGTCAGGAGTGCTAGGCAGCTTGTGCTTCTGACTGTTAACAAGGAAGACTCTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
||
| CDS-3UTR TCA 90 bp | ATATCCCTCCAGTATAGTGTGTATAAGCACTGTCCTTGGTCACTACTGCCATTTATGCTGCTGCTCCATTaGCGACTTTTAGTTCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: ISLQYSVYKHCPWSLLPFMLLLH*RLLVLQ Trigger: CTGGAGAACTAAAAGTCGTCAATGGAGCAGCAGCAT...AAATGGCAGTAGTGACCAAGGACAGTGCTTATACACACTATACTGGAGGGATAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
||
| CDS-3UTR TCA 90 bp | ATATCCCTCCAGTATAGTGTGTATAAGCACTGTCCTTGGTCACTACTGCCATTTCCTTCCATAGGGGCTTaGGCACAGAATCAAAAGACT | + |
|
Preference number: 4 (lower is better) Translates to: ISLQYSVYKHCPWSLLPFPSIGA*AQNQKT Trigger: AGTCTTTTGATTCTGTGCTCAAGCCCCTATGGAAGG...AAATGGCAGTAGTGACCAAGGACAGTGCTTATACACACTATACTGGAGGGATAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
||
| CDS-3UTR TCA 90 bp | AATAGCCCCTTAATGCTTGTTCTTCATAAACTGAACGGCATTTTGGCTTATGCTGTGGGTAATGTGCTATaGGAGCATCCTGGGAGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: NSPLMLVLHKLNGILAYAVGNVL*EHPGSQ Trigger: TTGGCTCCCAGGATGCTCTCATAGCACATTACCCAC...AGCATAAGCCAAAATGCCGTTCAGTTTATGAAGAACAAGCATTAAGGGGCTATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
||
| CDS-3UTR GCA 90 bp | TTACCTCCATCAGGAAAATGTCACTTAAGGGGTAAGCAGTCTCCTGTGAGCTGTCAAGAGCTGCCTTCTTaGCTTGAATTTCTCGAATCT | + |
|
Preference number: 4 (lower is better) Translates to: LPPSGKCHLRGKQSPVSCQELPS*LEFLES Trigger: AGATTCGAGAAATTCAAGGCAAGAAGGCAGCTCTTG...ACAGCTCACAGGAGACTGCTTACCCCTTAAGTGACATTTTCCTGATGGAGGTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
||
| CDS-3UTR GCA 90 bp | GCATTCATTTTAGGATCGGGAGTCTTCCCTCACTTTCGTGCCTTTGTCTCCATCGCAAATGGATCATACTaGTCTGTTGACTGTGGTATA | + |
|
Preference number: 4 (lower is better) Translates to: AFILGSGVFPHFRAFVSIANGSY*SVDCGI Trigger: TATACCACAGTCAACAGAGCAGTATGATCCATTTGC...GATGGAGACAAAGGCACGAAAGTGAGGGAAGACTCCCGATCCTAAAATGAATGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191303.2 |
||
| CDS-3UTR GCA 90 bp | ATATCCCTCCAGTATAGTGTGTATAAGCACTGTCCTTGGTCACTACTGCCATTTTGTTTCACTTCCTTTTaGACGACCCGGTGTCTCATC | + |
|
Preference number: 4 (lower is better) Translates to: ISLQYSVYKHCPWSLLPFCFTSF*TTRCLI Trigger: GATGAGACACCGGGTCGTGCAAAAGGAAGTGAAACA...AAATGGCAGTAGTGACCAAGGACAGTGCTTATACACACTATACTGGAGGGATAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
||
| CDS-3UTR GCA 90 bp | ATATCCCTCCAGTATAGTGTGTATAAGCACTGTCCTTGGTCACTACTGCCATTTACCATAAGGAGTTGCTaGCTCAGCCAAAGCAGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: ISLQYSVYKHCPWSLLPFTIRSC*LSQSSN Trigger: ATTGCTGCTTTGGCTGAGGCAGCAACTCCTTATGGT...AAATGGCAGTAGTGACCAAGGACAGTGCTTATACACACTATACTGGAGGGATAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
||
| CDS-3UTR GCA 90 bp | TTACCTCCATCAGGAAAATGTCACTTAAGGGGTAAGCAGTCTCCTGTGAGCTGTTGCACCTACTTTGTTTaGCAACTCCACAGTTGTATC | + |
|
Preference number: 4 (lower is better) Translates to: LPPSGKCHLRGKQSPVSCCTYFV*QLHSCI Trigger: GATACAACTGTGGAGTTGGCAAACAAAGTAGGTGCA...ACAGCTCACAGGAGACTGCTTACCCCTTAAGTGACATTTTCCTGATGGAGGTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
||
| CDS-3UTR CCA 90 bp | AAGCCAATACAGTATCTGACTGCTACATACAAGCTAAGCAAATCTAGGCATCTCGACCGAGCAAGCTCGTaGATGATGAGTAGTCATCGT | + |
|
Preference number: 4 (lower is better) Translates to: KPIQYLTATYKLSKSRHLDRASS*MMSSHR Trigger: ACGATGACTACTCATCATCCACGAGCTTGCTCGGTC...GAGATGCCTAGATTTGCTTAGCTTGTATGTAGCAGTCAGATACTGTATTGGCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
||
| CDS-3UTR CCA 90 bp | TTACCTCCATCAGGAAAATGTCACTTAAGGGGTAAGCAGTCTCCTGTGAGCTGTTATCTCTTTCTGTTTTaGGGGTCTCATCCCATCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LPPSGKCHLRGKQSPVSCYLFLF*GSHPIC Trigger: ACAGATGGGATGAGACCCCCAAAACAGAAAGAGATA...ACAGCTCACAGGAGACTGCTTACCCCTTAAGTGACATTTTCCTGATGGAGGTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
||
| CDS-3UTR TCA 90 bp | ATATCCCTCCAGTATAGTGTGTATAAGCACTGTCCTTGGTCACTACTGCCATTTGCTTTATCAGTAATCTaGCGTAAGGCAGCCTTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: ISLQYSVYKHCPWSLLPFALSVI*RKAAFL Trigger: GAGAAAGGCTGCCTTACGTCAGATTACTGATAAAGC...AAATGGCAGTAGTGACCAAGGACAGTGCTTATACACACTATACTGGAGGGATAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
||
| CDS-3UTR TCA 90 bp | TTACCTCCATCAGGAAAATGTCACTTAAGGGGTAAGCAGTCTCCTGTGAGCTGTTCTTCATCAGGAGACTaGAATTCTCGAATGAGGATT | + |
|
Preference number: 4 (lower is better) Translates to: LPPSGKCHLRGKQSPVSCSSSGD*NSRMRI Trigger: AATCCTCATTCGAGAATTTCAGTCTCCTGATGAAGA...ACAGCTCACAGGAGACTGCTTACCCCTTAAGTGACATTTTCCTGATGGAGGTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
||
| CDS-3UTR GCA 90 bp | ATATCCCTCCAGTATAGTGTGTATAAGCACTGTCCTTGGTCACTACTGCCATTTGGCTTCATCAAGAGCTaGCTTCTTGCCTTGAATTTC | + |
|
Preference number: 4 (lower is better) Translates to: ISLQYSVYKHCPWSLLPFGFIKS*LLALNF Trigger: GAAATTCAAGGCAAGAAGGCAGCTCTTGATGAAGCC...AAATGGCAGTAGTGACCAAGGACAGTGCTTATACACACTATACTGGAGGGATAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
||
| CDS-3UTR GCA 90 bp | AAGCCAATACAGTATCTGACTGCTACATACAAGCTAAGCAAATCTAGGCATCTCAGTCTTCCCTCCATCTaGAAAAGGATCAAGACGCTC | + |
|
Preference number: 4 (lower is better) Translates to: KPIQYLTATYKLSKSRHLSLPSI*KRIKTL Trigger: GAGCGTCTTGATCCTTTTGCAGATGGAGGGAAGACT...GAGATGCCTAGATTTGCTTAGCTTGTATGTAGCAGTCAGATACTGTATTGGCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
||
| CDS-3UTR GCA 90 bp | AATAGCCCCTTAATGCTTGTTCTTCATAAACTGAACGGCATTTTGGCTTATGCTATGGTCCGAACTTTCTaGTGCTCATCCACGAGACCA | + |
|
Preference number: 4 (lower is better) Translates to: NSPLMLVLHKLNGILAYAMVRTF*CSSTRP Trigger: TGGTCTCGTGGATGAGCAGCAGAAAGTTCGGACCAT...AGCATAAGCCAAAATGCCGTTCAGTTTATGAAGAACAAGCATTAAGGGGCTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
||
| CDS-3UTR GCA 90 bp | TTACCTCCATCAGGAAAATGTCACTTAAGGGGTAAGCAGTCTCCTGTGAGCTGTAGAAATCAAGTCAGCTaGTTGTTGCCTAACTTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: LPPSGKCHLRGKQSPVSCRNQVS*LLPNFC Trigger: GCAAAAGTTAGGCAACAAGCAGCTGACTTGATTTCT...ACAGCTCACAGGAGACTGCTTACCCCTTAAGTGACATTTTCCTGATGGAGGTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
||
| CDS-3UTR GCA 90 bp | AAGCCAATACAGTATCTGACTGCTACATACAAGCTAAGCAAATCTAGGCATCTCTCAGTGCTCCAAGAATaGTGCCCAATACTTCAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: KPIQYLTATYKLSKSRHLSVLQE*CPILQG Trigger: ACCCTGAAGTATTGGGCAGCATTCTTGGAGCACTGA...GAGATGCCTAGATTTGCTTAGCTTGTATGTAGCAGTCAGATACTGTATTGGCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
||
| CDS-3UTR CCA 90 bp | AAGCCAATACAGTATCTGACTGCTACATACAAGCTAAGCAAATCTAGGCATCTCAGGATCAAGACGCTCTaGGGAAATTATCATGGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: KPIQYLTATYKLSKSRHLRIKTL*GNYHGP Trigger: CGGACCATGATAATTTCCCCAGAGCGTCTTGATCCT...GAGATGCCTAGATTTGCTTAGCTTGTATGTAGCAGTCAGATACTGTATTGGCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
||
| CDS-3UTR CCA 90 bp | AATAGCCCCTTAATGCTTGTTCTTCATAAACTGAACGGCATTTTGGCTTATGCTATAGCTTTTTGGGAGTaGCACCAGGAGTCTGGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: NSPLMLVLHKLNGILAYAIAFWE*HQESGQ Trigger: CTGACCAGACTCCTGGTGCCACTCCCAAAAAGCTAT...AGCATAAGCCAAAATGCCGTTCAGTTTATGAAGAACAAGCATTAAGGGGCTATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
||
| CDS-3UTR CCA 90 bp | AAGCCAATACAGTATCTGACTGCTACATACAAGCTAAGCAAATCTAGGCATCTCAACTCGATAGCTTTTTaGGAGTGGCACCAGGAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: KPIQYLTATYKLSKSRHLNSIAF*EWHQES Trigger: AGACTCCTGGTGCCACTCCCAAAAAGCTATCGAGTT...GAGATGCCTAGATTTGCTTAGCTTGTATGTAGCAGTCAGATACTGTATTGGCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
||
| CDS-3UTR CCA 90 bp | ATATCCCTCCAGTATAGTGTGTATAAGCACTGTCCTTGGTCACTACTGCCATTTACTTGCTCCAGGAGTTaGTGTTTCACCAATAGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: ISLQYSVYKHCPWSLLPFTCSRS*CFTNRV Trigger: GACTCTATTGGTGAAACACCAACTCCTGGAGCAAGT...AAATGGCAGTAGTGACCAAGGACAGTGCTTATACACACTATACTGGAGGGATAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
||
| CDS-3UTR CCA 90 bp | CAGCTTCTCCACTTTATAAGCACAGGCCAAAGTTGGACAAGAAGTAAAATATATCCCTTTCCTCTGTGTTaGCGGATACCCTTCCATAGG | + |
|
Preference number: 4 (lower is better) Translates to: QLLHFISTGQSWTRSKIYPFPLC*RIPFHR Trigger: CCTATGGAAGGGTATCCGCCAACACAGAGGAAAGGG...ATATATTTTACTTCTTGTCCAACTTTGGCCTGTGCTTATAAAGTGGAGAAGCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
||
| CDS-3UTR CCA 90 bp | ATATCCCTCCAGTATAGTGTGTATAAGCACTGTCCTTGGTCACTACTGCCATTTACTGCCTGGATTACATaGGGAGATGTCTCAAACACA | + |
|
Preference number: 4 (lower is better) Translates to: ISLQYSVYKHCPWSLLPFTAWIT*GDVSNT Trigger: TGTGTTTGAGACATCTCCCCATGTAATCCAGGCAGT...AAATGGCAGTAGTGACCAAGGACAGTGCTTATACACACTATACTGGAGGGATAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
||
| CDS-3UTR GCA 90 bp | GGTTCTAGCATTCATTTTAGGATCGGGAGTCTTCCCTCACTTTCGTGCCTTTGTAATTTCTCGAATCTGTaGTTCGATATCTTCGTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: GSSIHFRIGSLPSLSCLCNFSNL*FDIFVS Trigger: ACTCACGAAGATATCGAAGCACAGATTCGAGAAATT...ACAAAGGCACGAAAGTGAGGGAAGACTCCCGATCCTAAAATGAATGCTAGAACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191303.2 |
||
| CDS-3UTR GCA 90 bp | AACATCCATGTAGGTTCTAGCATTCATTTTAGGATCGGGAGTCTTCCCTCACTTCAAGAGCTGCCTTCTTaGCTTGAATTTCTCGAATCT | + |
|
Preference number: 4 (lower is better) Translates to: NIHVGSSIHFRIGSLPSLQELPS*LEFLES Trigger: AGATTCGAGAAATTCAAGGCAAGAAGGCAGCTCTTG...AAGTGAGGGAAGACTCCCGATCCTAAAATGAATGCTAGAACCTACATGGATGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191303.2 |
||
| CDS-3UTR GCA 90 bp | AAGCCAATACAGTATCTGACTGCTACATACAAGCTAAGCAAATCTAGGCATCTCATCTTAATACCAGTGTaGCTCGCTTGCCAAGACTTC | + |
|
Preference number: 4 (lower is better) Translates to: KPIQYLTATYKLSKSRHLILIPV*LACQDF Trigger: GAAGTCTTGGCAAGCGAGGCACACTGGTATTAAGAT...GAGATGCCTAGATTTGCTTAGCTTGTATGTAGCAGTCAGATACTGTATTGGCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
||
| CDS-3UTR GCA 90 bp | AATAGCCCCTTAATGCTTGTTCTTCATAAACTGAACGGCATTTTGGCTTATGCTGTGCTCCAAGAATGCTaGCCAATACTTCAGGGTACT | + |
|
Preference number: 4 (lower is better) Translates to: NSPLMLVLHKLNGILAYAVLQEC*PILQGT Trigger: AGTACCCTGAAGTATTGGGCAGCATTCTTGGAGCAC...AGCATAAGCCAAAATGCCGTTCAGTTTATGAAGAACAAGCATTAAGGGGCTATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
||
| CDS-3UTR GCA 90 bp | CAGCTTCTCCACTTTATAAGCACAGGCCAAAGTTGGACAAGAAGTAAAATATATCAGAGCTCCCATAACTaGCTGGATTACATGGGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: QLLHFISTGQSWTRSKIYQSSHN*LDYMGR Trigger: TCTCCCCATGTAATCCAGGCAGTTATGGGAGCTCTG...ATATATTTTACTTCTTGTCCAACTTTGGCCTGTGCTTATAAAGTGGAGAAGCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
||
| CDS-3UTR CCA 90 bp | AACATCCATGTAGGTTCTAGCATTCATTTTAGGATCGGGAGTCTTCCCTCACTTCTGGGGAAATTATCATaGTCCGCCTATGCTTTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: NIHVGSSIHFRIGSLPSLLGKLS*SAYAFC Trigger: ACAAAAAGCATAGGCGGACCATGATAATTTCCCCAG...AAGTGAGGGAAGACTCCCGATCCTAAAATGAATGCTAGAACCTACATGGATGTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000191303.2 |
||
| CDS-3UTR CCA 90 bp | AAGCCAATACAGTATCTGACTGCTACATACAAGCTAAGCAAATCTAGGCATCTCAGGAACATAACCAGCTaGAGGGGGAAGTACCTTATA | + |
|
Preference number: 4 (lower is better) Translates to: KPIQYLTATYKLSKSRHLRNITS*RGKYLI Trigger: TATAAGGTACTTCCCCCTCCAGCTGGTTATGTTCCT...GAGATGCCTAGATTTGCTTAGCTTGTATGTAGCAGTCAGATACTGTATTGGCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
||
| CDS-3UTR CCA 90 bp | ATATCCCTCCAGTATAGTGTGTATAAGCACTGTCCTTGGTCACTACTGCCATTTATGTTTCAGCAACAATaGCTATGGCTACAGTCGTAC | + |
|
Preference number: 4 (lower is better) Translates to: ISLQYSVYKHCPWSLLPFMFQQQ*LWLQSY Trigger: GTACGACTGTAGCCATAGCCATTGTTGCTGAAACAT...AAATGGCAGTAGTGACCAAGGACAGTGCTTATACACACTATACTGGAGGGATAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
||
| CDS-3UTR CCA 90 bp | TTACCTCCATCAGGAAAATGTCACTTAAGGGGTAAGCAGTCTCCTGTGAGCTGTGGGAGCCAATGTAGATaGAGTTGTAAATTTTCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: LPPSGKCHLRGKQSPVSCGSQCR*SCKFSN Trigger: ATTGGAAAATTTACAACTCCATCTACATTGGCTCCC...ACAGCTCACAGGAGACTGCTTACCCCTTAAGTGACATTTTCCTGATGGAGGTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
||
| CDS-3UTR TCA 90 bp | CAGCTTCTCCACTTTATAAGCACAGGCCAAAGTTGGACAAGAAGTAAAATATATGAGGCAAGTATGGTTTaGCTCGTTTGCCAAGAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: QLLHFISTGQSWTRSKIYEASMV*LVCQEH Trigger: ATGCTCTTGGCAAACGAGTCAAACCATACTTGCCTC...ATATATTTTACTTCTTGTCCAACTTTGGCCTGTGCTTATAAAGTGGAGAAGCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
||
| CDS-3UTR GCA 90 bp | TTGTTCTCGCATAACATCCATGTAGGTTCTAGCATTCATTTTAGGATCGGGAGTATCTTTGGAGGACGATaGTCAGCAAATGGATCATAC | + |
|
Preference number: 4 (lower is better) Translates to: LFSHNIHVGSSIHFRIGSIFGGR*SANGSY Trigger: GTATGATCCATTTGCTGAGCATCGTCCTCCAAAGAT...ACTCCCGATCCTAAAATGAATGCTAGAACCTACATGGATGTTATGCGAGAACAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191303.2 |
||
| CDS-3UTR GCA 90 bp | ATATCCCTCCAGTATAGTGTGTATAAGCACTGTCCTTGGTCACTACTGCCATTTATCATGGTCCGCCTATaGTTTTTGTATTCATCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: ISLQYSVYKHCPWSLLPFIMVRL*FLYSSS Trigger: GGAAGATGAATACAAAAAGCATAGGCGGACCATGAT...AAATGGCAGTAGTGACCAAGGACAGTGCTTATACACACTATACTGGAGGGATAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
||
| CDS-3UTR GCA 90 bp | ATATCCCTCCAGTATAGTGTGTATAAGCACTGTCCTTGGTCACTACTGCCATTTAGACTTTCTTTTACTTaGTCCAGGAGTTGGTGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: ISLQYSVYKHCPWSLLPFRLSFT*SRSWCF Trigger: GAAACACCAACTCCTGGAGCAAGTAAAAGAAAGTCT...AAATGGCAGTAGTGACCAAGGACAGTGCTTATACACACTATACTGGAGGGATAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
||
| CDS-3UTR GCA 90 bp | CAGCTTCTCCACTTTATAAGCACAGGCCAAAGTTGGACAAGAAGTAAAATATATGCTGTTCAGGTGTCATaGTCATTATGTGACCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: QLLHFISTGQSWTRSKIYAVQVS*SLCDLE Trigger: CTCCAGGTCACATAATGAGCATGACACCTGAACAGC...ATATATTTTACTTCTTGTCCAACTTTGGCCTGTGCTTATAAAGTGGAGAAGCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
||
| CDS-3UTR GCA 90 bp | ATATCCCTCCAGTATAGTGTGTATAAGCACTGTCCTTGGTCACTACTGCCATTTAGATATGATCTCTGCTaGACCTACTTTGTTTGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: ISLQYSVYKHCPWSLLPFRYDLC*TYFVCQ Trigger: TTGGCAAACAAAGTAGGTGCAGCAGAGATCATATCT...AAATGGCAGTAGTGACCAAGGACAGTGCTTATACACACTATACTGGAGGGATAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
||
| CDS-3UTR GCA 90 bp | AAGCCAATACAGTATCTGACTGCTACATACAAGCTAAGCAAATCTAGGCATCTCACCATTTTCCTGTACTaGTCAGCTTCATCCTTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: KPIQYLTATYKLSKSRHLTIFLY*SASSFR Trigger: TCTGAAGGATGAAGCTGAGCAGTACAGGAAAATGGT...GAGATGCCTAGATTTGCTTAGCTTGTATGTAGCAGTCAGATACTGTATTGGCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
||
| CDS-3UTR CCA 90 bp | AAGCCAATACAGTATCTGACTGCTACATACAAGCTAAGCAAATCTAGGCATCTCAATTGGTGTTTTTCCTaGAGTCAGAACAGGAGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: KPIQYLTATYKLSKSRHLNWCFS*SQNRSA Trigger: AGCACTCCTGTTCTGACTCCAGGAAAAACACCAATT...GAGATGCCTAGATTTGCTTAGCTTGTATGTAGCAGTCAGATACTGTATTGGCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
||
| CDS-3UTR CCA 90 bp | AATAGCCCCTTAATGCTTGTTCTTCATAAACTGAACGGCATTTTGGCTTATGCTTCTTCAGTTTGCATGTaGAAACCAGTCATACCACCC | + |
|
Preference number: 4 (lower is better) Translates to: NSPLMLVLHKLNGILAYASSVCM*KPVIPP Trigger: GGGTGGTATGACTGGTTTCCACATGCAAACTGAAGA...AGCATAAGCCAAAATGCCGTTCAGTTTATGAAGAACAAGCATTAAGGGGCTATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
||
| CDS-3UTR TCA 90 bp | ATATCCCTCCAGTATAGTGTGTATAAGCACTGTCCTTGGTCACTACTGCCATTTATCATACTGCTCTGTTaGCTGTGGTATATCATTAAG | + |
|
Preference number: 4 (lower is better) Translates to: ISLQYSVYKHCPWSLLPFIILLC*LWYIIK Trigger: CTTAATGATATACCACAGTCAACAGAGCAGTATGAT...AAATGGCAGTAGTGACCAAGGACAGTGCTTATACACACTATACTGGAGGGATAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
||
| CDS-3UTR GCA 90 bp | ATATCCCTCCAGTATAGTGTGTATAAGCACTGTCCTTGGTCACTACTGCCATTTAATTTCTCGAATCTGTaGTTCGATATCTTCGTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: ISLQYSVYKHCPWSLLPFNFSNL*FDIFVS Trigger: ACTCACGAAGATATCGAAGCACAGATTCGAGAAATT...AAATGGCAGTAGTGACCAAGGACAGTGCTTATACACACTATACTGGAGGGATAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
||
| CDS-3UTR GCA 90 bp | CAGCTTCTCCACTTTATAAGCACAGGCCAAAGTTGGACAAGAAGTAAAATATATTGTTCATGGCTGGTGTaGCAATTGGTGTTTTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: QLLHFISTGQSWTRSKIYCSWLV*QLVFFL Trigger: CAGGAAAAACACCAATTGGCACACCAGCCATGAACA...ATATATTTTACTTCTTGTCCAACTTTGGCCTGTGCTTATAAAGTGGAGAAGCTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
||
| CDS-3UTR GCA 90 bp | AAGCCAATACAGTATCTGACTGCTACATACAAGCTAAGCAAATCTAGGCATCTCGTTCTGTCTTCAGTTTaGATGTGGAAACCAGTCATA | + |
|
Preference number: 4 (lower is better) Translates to: KPIQYLTATYKLSKSRHLVLSSV*MWKPVI Trigger: TATGACTGGTTTCCACATGCAAACTGAAGACAGAAC...GAGATGCCTAGATTTGCTTAGCTTGTATGTAGCAGTCAGATACTGTATTGGCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
||
| CDS-3UTR GCA 90 bp | AAGCCAATACAGTATCTGACTGCTACATACAAGCTAAGCAAATCTAGGCATCTCCTTGCCAAGACTTCTTaGTTTTGCACACAGCTTTTA | + |
|
Preference number: 4 (lower is better) Translates to: KPIQYLTATYKLSKSRHLLAKTS*FCTQLL Trigger: TAAAAGCTGTGTGCAAAAGCAAGAAGTCTTGGCAAG...GAGATGCCTAGATTTGCTTAGCTTGTATGTAGCAGTCAGATACTGTATTGGCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
||
| CDS-3UTR GCA 90 bp | CAGCTTCTCCACTTTATAAGCACAGGCCAAAGTTGGACAAGAAGTAAAATATATTACAATAGCCTTCAGTaGTCCAAGAATGCTGCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: QLLHFISTGQSWTRSKIYYNSLQ*SKNAAQ Trigger: TTGGGCAGCATTCTTGGAGCACTGAAGGCTATTGTA...ATATATTTTACTTCTTGTCCAACTTTGGCCTGTGCTTATAAAGTGGAGAAGCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
||
| CDS-3UTR CCA 90 bp | AATAGCCCCTTAATGCTTGTTCTTCATAAACTGAACGGCATTTTGGCTTATGCTAACAGAGGAAGAATCTaGTTAAACAGTGGTCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: NSPLMLVLHKLNGILAYANRGRI*LNSGPA Trigger: AGCTGGACCACTGTTTAACCAGATTCTTCCTCTGTT...AGCATAAGCCAAAATGCCGTTCAGTTTATGAAGAACAAGCATTAAGGGGCTATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
||
| CDS-3UTR CCA 90 bp | CAGCTTCTCCACTTTATAAGCACAGGCCAAAGTTGGACAAGAAGTAAAATATATGATCTGAGGCAAGTATaGTTTGACTCGTTTGCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: QLLHFISTGQSWTRSKIYDLRQV*FDSFAK Trigger: CTTGGCAAACGAGTCAAACCATACTTGCCTCAGATC...ATATATTTTACTTCTTGTCCAACTTTGGCCTGTGCTTATAAAGTGGAGAAGCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
||
| CDS-3UTR CCA 90 bp | ATATCCCTCCAGTATAGTGTGTATAAGCACTGTCCTTGGTCACTACTGCCATTTGAGATCTTTAATTGGTaGTGTCATCTTATGCATACC | + |
|
Preference number: 4 (lower is better) Translates to: ISLQYSVYKHCPWSLLPFEIFNW*CHLMHT Trigger: GGTATGCATAAGATGACACCACCAATTAAAGATCTC...AAATGGCAGTAGTGACCAAGGACAGTGCTTATACACACTATACTGGAGGGATAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
||
| 3UTR CAA 72 bp | CAAGCTACTCTTCATTACCAACAAAACAATGGGCTTTaGACAAACAGGCCATCACTATATAGTTTGCGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: QATLHYQQNNGL*TNRPSLYSLRA Trigger: AGCACGCAAACTATATAGTGATGGCCTGTTTGTCAAAAGCCCATTGTTTTGTTGGTAATGAAGAGTAGCTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
||
| CDS-3UTR TCA 90 bp | CAGCTTCTCCACTTTATAAGCACAGGCCAAAGTTGGACAAGAAGTAAAATATATTTCAGTTGCAGCAATTaGTGTCACATATCCAGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: QLLHFISTGQSWTRSKIYFSCSN*CHISSK Trigger: TTTGCTGGATATGTGACATCAATTGCTGCAACTGAA...ATATATTTTACTTCTTGTCCAACTTTGGCCTGTGCTTATAAAGTGGAGAAGCTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
||
| CDS-3UTR GCA 90 bp | AATAGCCCCTTAATGCTTGTTCTTCATAAACTGAACGGCATTTTGGCTTATGCTCATATCCAGCAAATCTaGTATCACTTCCACCATAAA | + |
|
Preference number: 4 (lower is better) Translates to: NSPLMLVLHKLNGILAYAHIQQI*YHFHHK Trigger: TTTATGGTGGAAGTGATAGCAGATTTGCTGGATATG...AGCATAAGCCAAAATGCCGTTCAGTTTATGAAGAACAAGCATTAAGGGGCTATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
||
| CDS-3UTR GCA 90 bp | CAGCTTCTCCACTTTATAAGCACAGGCCAAAGTTGGACAAGAAGTAAAATATATGCAAATGGATCATACTaGTCTGTTGACTGTGGTATA | + |
|
Preference number: 4 (lower is better) Translates to: QLLHFISTGQSWTRSKIYANGSY*SVDCGI Trigger: TATACCACAGTCAACAGAGCAGTATGATCCATTTGC...ATATATTTTACTTCTTGTCCAACTTTGGCCTGTGCTTATAAAGTGGAGAAGCTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
||
| CDS-3UTR GCA 90 bp | AGTCAAATGTTGTTCTCGCATAACATCCATGTAGGTTCTAGCATTCATTTTAGGATCATGGTCCGCCTATaGTTTTTGTATTCATCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SQMLFSHNIHVGSSIHFRIMVRL*FLYSSS Trigger: GGAAGATGAATACAAAAAGCATAGGCGGACCATGAT...CCTAAAATGAATGCTAGAACCTACATGGATGTTATGCGAGAACAACATTTGACT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000191303.2 |
||
| CDS-3UTR GCA 90 bp | AATAGCCCCTTAATGCTTGTTCTTCATAAACTGAACGGCATTTTGGCTTATGCTAGGGCCAATAGCCTTTaGGATATAACCAAATGTATT | + |
|
Preference number: 4 (lower is better) Translates to: NSPLMLVLHKLNGILAYARANSL*DITKCI Trigger: AATACATTTGGTTATATCGCAAAGGCTATTGGCCCT...AGCATAAGCCAAAATGCCGTTCAGTTTATGAAGAACAAGCATTAAGGGGCTATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
||
| CDS-3UTR TCA 90 bp | TTCCTTAGTCAAATGTTGTTCTCGCATAACATCCATGTAGGTTCTAGCATTCATATCATACTGCTCTGTTaGCTGTGGTATATCATTAAG | + |
|
Preference number: 4 (lower is better) Translates to: FLSQMLFSHNIHVGSSIHIILLC*LWYIIK Trigger: CTTAATGATATACCACAGTCAACAGAGCAGTATGAT...ATGAATGCTAGAACCTACATGGATGTTATGCGAGAACAACATTTGACTAAGGAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191303.2 |
||
| CDS-3UTR GCA 90 bp | CAAATGTTGTTCTCGCATAACATCCATGTAGGTTCTAGCATTCATTTTAGGATCCATATCCAGCAAATCTaGTATCACTTCCACCATAAA | + |
|
Preference number: 4 (lower is better) Translates to: QMLFSHNIHVGSSIHFRIHIQQI*YHFHHK Trigger: TTTATGGTGGAAGTGATAGCAGATTTGCTGGATATG...GATCCTAAAATGAATGCTAGAACCTACATGGATGTTATGCGAGAACAACATTTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191303.2 |
||
| CDS-3UTR CCA 90 bp | CAGCTTCTCCACTTTATAAGCACAGGCCAAAGTTGGACAAGAAGTAAAATATATCAGGAGATCTTTAATTaGTGGTGTCATCTTATGCAT | + |
|
Preference number: 4 (lower is better) Translates to: QLLHFISTGQSWTRSKIYQEIFN*WCHLMH Trigger: ATGCATAAGATGACACCACCAATTAAAGATCTCCTG...ATATATTTTACTTCTTGTCCAACTTTGGCCTGTGCTTATAAAGTGGAGAAGCTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
||
| CDS CCA 90 bp | ACGAGCACTGGAAGTTGCACCACCATGGCCCGGGGTTGCATGGCCTaGTGTGTCGCCTCGCCCAGGAGTAGCAGCTCCCGCAGGTGTATG | + |
|
Preference number: 5 (lower is better) Translates to: TSTGSCTTMARGCMA*CVASPRSSSSRRCM Trigger: CATACACCTGCGGGAGCTGCTACTCCTGGGCGAGGCGACACACCAGGCCATGCAACCCCGGGCCATGGTGGTGCAACTTCCAGTGCTCGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
||
| CDS GCA 90 bp | TCTGTTTTTACGAGCACTGGAAGTTGCACCACCATGGCCCGGGGTTaGATGGCCTGGTGTGTCGCCTCGCCCAGGAGTAGCAGCTCCCGC | + |
|
Preference number: 5 (lower is better) Translates to: SVFTSTGSCTTMARG*MAWCVASPRSSSSR Trigger: GCGGGAGCTGCTACTCCTGGGCGAGGCGACACACCAGGCCATGCAACCCCGGGCCATGGTGGTGCAACTTCCAGTGCTCGTAAAAACAGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
||
| CDS CCA 90 bp | TTTTTACGAGCACTGGAAGTTGCACCACCATGGCCCGGGGTTGCATaGCCTGGTGTGTCGCCTCGCCCAGGAGTAGCAGCTCCCGCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: FLRALEVAPPWPGVA*PGVSPRPGVAAPAG Trigger: ACCTGCGGGAGCTGCTACTCCTGGGCGAGGCGACACACCAGGCCATGCAACCCCGGGCCATGGTGGTGCAACTTCCAGTGCTCGTAAAAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
||
| CDS TCA 90 bp | CCTGGTGTGTCGCCTCGCCCAGGAGTAGCAGCTCCCGCAGGTGTATaGCTCGGTGTAGGGTCCCATATTTTTGAGCCTGGGGTTGCGCCA | + |
|
Preference number: 5 (lower is better) Translates to: PGVSPRPGVAAPAGV*LGVGSHIFEPGVAP Trigger: TGGCGCAACCCCAGGCTCAAAAATATGGGACCCTACACCGAGTCATACACCTGCGGGAGCTGCTACTCCTGGGCGAGGCGACACACCAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
||
| CDS CCA 90 bp | GGGTATGCCCAGGGGTCTCTGCCTGATCCCAACTCGATAGCTTTTTaGGAGTGGCACCAGGAGTCTGGTCAGCGGTCTGATCCCAGCGCC | + |
|
Preference number: 5 (lower is better) Translates to: GYAQGSLPDPNSIAF*EWHQESGQRSDPSA Trigger: GGCGCTGGGATCAGACCGCTGACCAGACTCCTGGTGCCACTCCCAAAAAGCTATCGAGTTGGGATCAGGCAGAGACCCCTGGGCATACCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
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| CDS CCA 90 bp | GTCTCATCCCATCTGTTTTTACGAGCACTGGAAGTTGCACCACCATaGCCCGGGGTTGCATGGCCTGGTGTGTCGCCTCGCCCAGGAGTA | + |
|
Preference number: 5 (lower is better) Translates to: VSSHLFLRALEVAPP*PGVAWPGVSPRPGV Trigger: TACTCCTGGGCGAGGCGACACACCAGGCCATGCAACCCCGGGCCATGGTGGTGCAACTTCCAGTGCTCGTAAAAACAGATGGGATGAGAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
||
| CDS-3UTR CAA 90 bp | CGCCCACCCTTCCGTTACATGAAAGGCCGGATCATGTGCACCTTCGAAGCCCCTAGCGCCGTTTTCGTTTaGAGGGAGGCTGGGATGCTG | + |
|
Preference number: 5 (lower is better) Translates to: RPPFRYMKGRIMCTFEAPSAVFV*REAGML Trigger: CAGCATCCCAGCCTCCCTCAAAACGAAAACGGCGCT...AGGGGCTTCGAAGGTGCACATGATCCGGCCTTTCATGTAACGGAAGGGTGGGCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
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| CDS-3UTR CAA 90 bp | CGCCCACCCTTCCGTTACATGAAAGGCCGGATCATGTGCACCTTCGAAGCCCCTCAACTCGATAGCTTTTaGGGAGTGGCACCAGGAGTC | + |
|
Preference number: 5 (lower is better) Translates to: RPPFRYMKGRIMCTFEAPQLDSF*GVAPGV Trigger: GACTCCTGGTGCCACTCCCAAAAAGCTATCGAGTTG...AGGGGCTTCGAAGGTGCACATGATCCGGCCTTTCATGTAACGGAAGGGTGGGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
||
| CDS-3UTR CAA 90 bp | CGCCCACCCTTCCGTTACATGAAAGGCCGGATCATGTGCACCTTCGAAGCCCCTTTTTTGAGCCTGGGGTaGCGCCAGGTGTTTCACTTC | + |
|
Preference number: 5 (lower is better) Translates to: RPPFRYMKGRIMCTFEAPFLSLG*RQVFHF Trigger: GAAGTGAAACACCTGGCGCAACCCCAGGCTCAAAAA...AGGGGCTTCGAAGGTGCACATGATCCGGCCTTTCATGTAACGGAAGGGTGGGCG 57% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
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| CDS CCA 90 bp | CGGGGTAGCCATGTTCATGGCTGGTGTGCCAATTGGTGTTTTTCCTaGAGTCAGAACAGGAGTGCTTCCACCCATTTGACTCGCCGGCGT | + |
|
Preference number: 5 (lower is better) Translates to: RGSHVHGWCANWCFS*SQNRSASTHLTRRR Trigger: ACGCCGGCGAGTCAAATGGGTGGAAGCACTCCTGTTCTGACTCCAGGAAAAACACCAATTGGCACACCAGCCATGAACATGGCTACCCCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
||
| CDS GCA 90 bp | TGGCTGGTGTGCCAATTGGTGTTTTTCCTGGAGTCAGAACAGGAGTaGTTCCACCCATTTGACTCGCCGGCGTTTCATCCCAACGAGACT | + |
|
Preference number: 5 (lower is better) Translates to: WLVCQLVFFLESEQE*FHPFDSPAFHPNET Trigger: AGTCTCGTTGGGATGAAACGCCGGCGAGTCAAATGGGTGGAAGCACTCCTGTTCTGACTCCAGGAAAAACACCAATTGGCACACCAGCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
||
| CDS CCA 90 bp | GTGACCTGGAGTCGGGGTAGCCATGTTCATGGCTGGTGTGCCAATTaGTGTTTTTCCTGGAGTCAGAACAGGAGTGCTTCCACCCATTTG | + |
|
Preference number: 5 (lower is better) Translates to: VTWSRGSHVHGWCAN*CFSWSQNRSASTHL Trigger: CAAATGGGTGGAAGCACTCCTGTTCTGACTCCAGGAAAAACACCAATTGGCACACCAGCCATGAACATGGCTACCCCGACTCCAGGTCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
||
| CDS-3UTR CAA 90 bp | TTACCTCCATCAGGAAAATGTCACTTAAGGGGTAAGCAGTCTCCTGTGAGCTGTTACGAGCACTGGAAGTaGCACCACCATGGCCCGGGG | + |
|
Preference number: 5 (lower is better) Translates to: LPPSGKCHLRGKQSPVSCYEHWK*HHHGPG Trigger: CCCCGGGCCATGGTGGTGCAACTTCCAGTGCTCGTA...ACAGCTCACAGGAGACTGCTTACCCCTTAAGTGACATTTTCCTGATGGAGGTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
||
| CDS TCA 90 bp | CATAAGGAGTTGCTGCCTCAGCCAAAGCAGCAATGGCCAGAGCACTaGTGGTCCGAACTTTCTGCTGCTCATCCACGAGACCATGTTCAA | + |
|
Preference number: 5 (lower is better) Translates to: HKELLPQPKQQWPEH*WSELSAAHPRDHVQ Trigger: TTGAACATGGTCTCGTGGATGAGCAGCAGAAAGTTCGGACCATCAGTGCTCTGGCCATTGCTGCTTTGGCTGAGGCAGCAACTCCTTATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
||
| CDS TCA 90 bp | ACACCAAGTGACATGTGCTGCACCACTGCACTCGCTGTCTGTCTGTaGACAAGGTCCCTGTCCATTAACGCATCCTCAAGTAAAGGCGTC | + |
|
Preference number: 5 (lower is better) Translates to: TPSDMCCTTALAVCL*TRSLSINASSSKGV Trigger: GACGCCTTTACTTGAGGATGCGTTAATGGACAGGGACCTTGTTCACAGACAGACAGCGAGTGCAGTGGTGCAGCACATGTCACTTGGTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
||
| CDS CCA 90 bp | CCACGGGGGCATGATATCCAGGCTTCTTCTGACCGAGCAAGCTCGTaGATGATGAGTAGTCATCGTCATCATCTTCAAGTTCAGTTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: PRGHDIQASSDRASS*MMSSHRHHLQVQLQ Trigger: CTGCAACTGAACTTGAAGATGATGACGATGACTACTCATCATCCACGAGCTTGCTCGGTCAGAAGAAGCCTGGATATCATGCCCCCGTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027127.14 ENSMUST00000191303.2 |
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| CDS CCA 90 bp | CATGCTCATTATGTGACCTGGAGTCGGGGTAGCCATGTTCATGGCTaGTGTGCCAATTGGTGTTTTTCCTGGAGTCAGAACAGGAGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: HAHYVTWSRGSHVHG*CANWCFSWSQNRSA Trigger: AGCACTCCTGTTCTGACTCCAGGAAAAACACCAATTGGCACACCAGCCATGAACATGGCTACCCCGACTCCAGGTCACATAATGAGCATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
||
| CDS TCA 90 bp | CCAGACCCTTTCCTCTGTGTTGGCGGATACCCTTCCATAGGGGCTTaGGCACAGAATCAAAAGACTCAATACCATAAGGAGTTGCTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: PDPFLCVGGYPSIGA*AQNQKTQYHKELLP Trigger: AGGCAGCAACTCCTTATGGTATTGAGTCTTTTGATTCTGTGCTCAAGCCCCTATGGAAGGGTATCCGCCAACACAGAGGAAAGGGTCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
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| CDS CCA 90 bp | AGTCATACCACCCAAAGGTGTAGGAGTTGCTGTCAGCTTTCGAGCTaGAGTTCGAATAGGAACATAACCAGCTGGAGGGGGAAGTACCTT | + |
|
Preference number: 5 (lower is better) Translates to: SHTTQRCRSCCQLSS*SSNRNITSWRGKYL Trigger: AAGGTACTTCCCCCTCCAGCTGGTTATGTTCCTATTCGAACTCCAGCTCGAAAGCTGACAGCAACTCCTACACCTTTGGGTGGTATGACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
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| CDS-3UTR CAA 90 bp | CGCCCACCCTTCCGTTACATGAAAGGCCGGATCATGTGCACCTTCGAAGCCCCTTCCACCATAAATTTCTaGGTCATAATAACCTGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: RPPFRYMKGRIMCTFEAPSTINF*VIITCG Trigger: TCCACAGGTTATTATGACCAAGAAATTTATGGTGGA...AGGGGCTTCGAAGGTGCACATGATCCGGCCTTTCATGTAACGGAAGGGTGGGCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
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| CDS-3UTR CAA 90 bp | CCAGAGTCTTCCTTGTTAACAGTCAGAAGCACAAGCTGCCTAGCACTCCTGACATGGCTGGTGTGCCAATaGGTGTTTTTCCTGGAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: PESSLLTVRSTSCLALLTWLVCQ*VFFLES Trigger: TGACTCCAGGAAAAACACCAATTGGCACACCAGCCA...TGTCAGGAGTGCTAGGCAGCTTGTGCTTCTGACTGTTAACAAGGAAGACTCTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
||
| CDS-3UTR CAA 90 bp | CGCCCACCCTTCCGTTACATGAAAGGCCGGATCATGTGCACCTTCGAAGCCCCTGAGAATGGCTATCTGTaGTACAATCTTAATACCAGT | + |
|
Preference number: 5 (lower is better) Translates to: RPPFRYMKGRIMCTFEAPENGYL*YNLNTS Trigger: ACTGGTATTAAGATTGTACAACAGATAGCCATTCTC...AGGGGCTTCGAAGGTGCACATGATCCGGCCTTTCATGTAACGGAAGGGTGGGCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
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| CDS GCA 90 bp | CATTTGACTCGCCGGCGTTTCATCCCAACGAGACTTTCTTTTACTTaGTCCAGGAGTTGGTGTTTCACCAATAGAGTCTCCACCTCGATC | + |
|
Preference number: 5 (lower is better) Translates to: HLTRRRFIPTRLSFT*SRSWCFTNRVSTSI Trigger: GATCGAGGTGGAGACTCTATTGGTGAAACACCAACTCCTGGAGCAAGTAAAAGAAAGTCTCGTTGGGATGAAACGCCGGCGAGTCAAATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
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| CDS CCA 90 bp | CGGCGTTTCATCCCAACGAGACTTTCTTTTACTTGCTCCAGGAGTTaGTGTTTCACCAATAGAGTCTCCACCTCGATCTGTTCGAGGAGT | + |
|
Preference number: 5 (lower is better) Translates to: RRFIPTRLSFTCSRS*CFTNRVSTSICSRS Trigger: ACTCCTCGAACAGATCGAGGTGGAGACTCTATTGGTGAAACACCAACTCCTGGAGCAAGTAAAAGAAAGTCTCGTTGGGATGAAACGCCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
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| CDS TCA 90 bp | ATTGGTGTTTTTCCTGGAGTCAGAACAGGAGTGCTTCCACCCATTTaGCTCGCCGGCGTTTCATCCCAACGAGACTTTCTTTTACTTGCT | + |
|
Preference number: 5 (lower is better) Translates to: IGVFPGVRTGVLPPI*LAGVSSQRDFLLLA Trigger: AGCAAGTAAAAGAAAGTCTCGTTGGGATGAAACGCCGGCGAGTCAAATGGGTGGAAGCACTCCTGTTCTGACTCCAGGAAAAACACCAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
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| CDS GCA 90 bp | TGGAATCAAGGCCCACTCCTTGGGCTTCATCAAGAGCTGCCTTCTTaGCTTGAATTTCTCGAATCTGTGCTTCGATATCTTCGTGAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: WNQGPLLGLHQELPS*LEFLESVLRYLRES Trigger: AGACTCACGAAGATATCGAAGCACAGATTCGAGAAATTCAAGGCAAGAAGGCAGCTCTTGATGAAGCCCAAGGAGTGGGCCTTGATTCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027127.14 ENSMUST00000191303.2 |
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| CDS GCA 90 bp | AGTTTGCATGTGGAAACCAGTCATACCACCCAAAGGTGTAGGAGTTaGTGTCAGCTTTCGAGCTGGAGTTCGAATAGGAACATAACCAGC | + |
|
Preference number: 5 (lower is better) Translates to: SLHVETSHTTQRCRS*CQLSSWSSNRNITS Trigger: GCTGGTTATGTTCCTATTCGAACTCCAGCTCGAAAGCTGACAGCAACTCCTACACCTTTGGGTGGTATGACTGGTTTCCACATGCAAACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
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| CDS-3UTR CAA 90 bp | ATTTTAGGATCGGGAGTCTTCCCTCACTTTCGTGCCTTTGTCTCCATCAGCAGTAGCTGCCTTCTTGCCTaGAATTTCTCGAATCTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: ILGSGVFPHFRAFVSISSSCLLA*NFSNLC Trigger: GCACAGATTCGAGAAATTCAAGGCAAGAAGGCAGCT...ACTGCTGATGGAGACAAAGGCACGAAAGTGAGGGAAGACTCCCGATCCTAAAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191303.2 |
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| CDS-3UTR CAA 90 bp | TTACCTCCATCAGGAAAATGTCACTTAAGGGGTAAGCAGTCTCCTGTGAGCTGTCAATACCATAAGGAGTaGCTGCCTCAGCCAAAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: LPPSGKCHLRGKQSPVSCQYHKE*LPQPKQ Trigger: CTGCTTTGGCTGAGGCAGCAACTCCTTATGGTATTG...ACAGCTCACAGGAGACTGCTTACCCCTTAAGTGACATTTTCCTGATGGAGGTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
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| CDS GCA 90 bp | ATAACCTGTGGAATCAAGGCCCACTCCTTGGGCTTCATCAAGAGCTaGCTTCTTGCCTTGAATTTCTCGAATCTGTGCTTCGATATCTTC | + |
|
Preference number: 5 (lower is better) Translates to: ITCGIKAHSLGFIKS*LLALNFSNLCFDIF Trigger: GAAGATATCGAAGCACAGATTCGAGAAATTCAAGGCAAGAAGGCAGCTCTTGATGAAGCCCAAGGAGTGGGCCTTGATTCCACAGGTTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027127.14 ENSMUST00000191303.2 |
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| CDS CCA 90 bp | AGGATCGGGAGTCTTCCCTCCATCTGCAAAAGGATCAAGACGCTCTaGGGAAATTATCATGGTCCGCCTATGCTTTTTGTATTCATCTTC | + |
|
Preference number: 5 (lower is better) Translates to: RIGSLPSICKRIKTL*GNYHGPPMLFVFIF Trigger: GAAGATGAATACAAAAAGCATAGGCGGACCATGATAATTTCCCCAGAGCGTCTTGATCCTTTTGCAGATGGAGGGAAGACTCCCGATCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
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| CDS CCA 90 bp | GGCTGGTCATTGACACTTTTCATAGTTCTGTCTTCAGTTTGCATGTaGAAACCAGTCATACCACCCAAAGGTGTAGGAGTTGCTGTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: GWSLTLFIVLSSVCM*KPVIPPKGVGVAVS Trigger: GCTGACAGCAACTCCTACACCTTTGGGTGGTATGACTGGTTTCCACATGCAAACTGAAGACAGAACTATGAAAAGTGTCAATGACCAGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
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| CDS-3UTR CAA 90 bp | CCAGAGTCTTCCTTGTTAACAGTCAGAAGCACAAGCTGCCTAGCACTCCTGACAGTTCAGTTGCAGCAATaGATGTCACATATCCAGCAA | + |
|
Preference number: 5 (lower is better) Translates to: PESSLLTVRSTSCLALLTVQLQQ*MSHIQQ Trigger: TTGCTGGATATGTGACATCAATTGCTGCAACTGAAC...TGTCAGGAGTGCTAGGCAGCTTGTGCTTCTGACTGTTAACAAGGAAGACTCTGG 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
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| CDS-3UTR CAA 90 bp | TTACCTCCATCAGGAAAATGTCACTTAAGGGGTAAGCAGTCTCCTGTGAGCTGTGTATCTCTTTCTGTTTaGGGGGTCTCATCCCATCTG | + |
|
Preference number: 5 (lower is better) Translates to: LPPSGKCHLRGKQSPVSCVSLSV*GVSSHL Trigger: CAGATGGGATGAGACCCCCAAAACAGAAAGAGATAC...ACAGCTCACAGGAGACTGCTTACCCCTTAAGTGACATTTTCCTGATGGAGGTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
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| CDS TCA 90 bp | GGGAGCCAATGTAGATGGAGTTGTAAATTTTCCAATATACGTCTCTaGCTTTCCGAGCTGGGTGGAACAGACCCTGTAAGCAATACTGCA | + |
|
Preference number: 5 (lower is better) Translates to: GSQCRWSCKFSNIRL*LSELGGTDPVSNTA Trigger: TGCAGTATTGCTTACAGGGTCTGTTCCACCCAGCTCGGAAAGTCAGAGACGTATATTGGAAAATTTACAACTCCATCTACATTGGCTCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
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| CDS GCA 90 bp | CCAGATGGCTGGTCATTGACACTTTTCATAGTTCTGTCTTCAGTTTaGATGTGGAAACCAGTCATACCACCCAAAGGTGTAGGAGTTGCT | + |
|
Preference number: 5 (lower is better) Translates to: PDGWSLTLFIVLSSV*MWKPVIPPKGVGVA Trigger: AGCAACTCCTACACCTTTGGGTGGTATGACTGGTTTCCACATGCAAACTGAAGACAGAACTATGAAAAGTGTCAATGACCAGCCATCTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
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| CDS-3UTR CAA 90 bp | TTAGGATCGGGAGTCTTCCCTCACTTTCGTGCCTTTGTCTCCATCAGCAGTTCTCATCTTCAAGTTCAGTaGCAGCAATTGATGTCACAT | + |
|
Preference number: 5 (lower is better) Translates to: LGSGVFPHFRAFVSISSSHLQVQ*QQLMSH Trigger: ATGTGACATCAATTGCTGCAACTGAACTTGAAGATG...AGAACTGCTGATGGAGACAAAGGCACGAAAGTGAGGGAAGACTCCCGATCCTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191303.2 |
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| CDS CCA 90 bp | ATCTGCTATCACTTCCACCATAAATTTCTTGGTCATAATAACCTGTaGAATCAAGGCCCACTCCTTGGGCTTCATCAAGAGCTGCCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: ICYHFHHKFLGHNNL*NQGPLLGLHQELPS Trigger: AGAAGGCAGCTCTTGATGAAGCCCAAGGAGTGGGCCTTGATTCCACAGGTTATTATGACCAAGAAATTTATGGTGGAAGTGATAGCAGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027127.14 ENSMUST00000191303.2 |
||
| CDS-3UTR CAA 90 bp | TTACCTCCATCAGGAAAATGTCACTTAAGGGGTAAGCAGTCTCCTGTGAGCTGTGAGACTTTCTTTTACTaGCTCCAGGAGTTGGTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: LPPSGKCHLRGKQSPVSCETFFY*LQELVF Trigger: AAACACCAACTCCTGGAGCAAGTAAAAGAAAGTCTC...ACAGCTCACAGGAGACTGCTTACCCCTTAAGTGACATTTTCCTGATGGAGGTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
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| CDS-3UTR CAA 90 bp | CAGCTTCTCCACTTTATAAGCACAGGCCAAAGTTGGACAAGAAGTAAAATATATAGTGCTTCCACCCATTaGACTCGCCGGCGTTTCATC | + |
|
Preference number: 5 (lower is better) Translates to: QLLHFISTGQSWTRSKIYSASTH*TRRRFI Trigger: GATGAAACGCCGGCGAGTCAAATGGGTGGAAGCACT...ATATATTTTACTTCTTGTCCAACTTTGGCCTGTGCTTATAAAGTGGAGAAGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
||
| CDS GCA 90 bp | TGCTTTTTGTATTCATCTTCCCGATCGGCAATCTTTGGAGGACGATaGTCAGCAAATGGATCATACTGCTCTGTTGACTGTGGTATATCA | + |
|
Preference number: 5 (lower is better) Translates to: CFLYSSSRSAIFGGR*SANGSYCSVDCGIS Trigger: TGATATACCACAGTCAACAGAGCAGTATGATCCATTTGCTGAGCATCGTCCTCCAAAGATTGCCGATCGGGAAGATGAATACAAAAAGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027127.14 ENSMUST00000191303.2 |
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| CDS GCA 90 bp | TGGTGTCATCTTATGCATACCTATTACGTTTACAATAGCCTTCAGTaGTCCAAGAATGCTGCCCAATACTTCAGGGTACTCTTCACCCAA | + |
|
Preference number: 5 (lower is better) Translates to: WCHLMHTYYVYNSLQ*SKNAAQYFRVLFTQ Trigger: TTGGGTGAAGAGTACCCTGAAGTATTGGGCAGCATTCTTGGAGCACTGAAGGCTATTGTAAACGTAATAGGTATGCATAAGATGACACCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
||
| CDS CCA 90 bp | TCAAGCAGCAGAATAGAAGCCATCTGCAAAAGGATCAAGACGCTCTaGGGAAATTATCATGGTCCGCCTATGCTTTTTGTATTCATCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SSSRIEAICKRIKTL*GNYHGPPMLFVFIF Trigger: GAAGATGAATACAAAAAGCATAGGCGGACCATGATAATTTCCCCAGAGCGTCTTGATCCTTTTGCAGATGGCTTCTATTCTGCTGCTTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000191303.2 |
||
| CDS-3UTR CAA 90 bp | AAGCCAATACAGTATCTGACTGCTACATACAAGCTAAGCAAATCTAGGCATCTCGATGCTGCTGCTCCATaGACGACTTTTAGTTCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: KPIQYLTATYKLSKSRHLDAAAP*TTFSSP Trigger: TGGAGAACTAAAAGTCGTCAATGGAGCAGCAGCATC...GAGATGCCTAGATTTGCTTAGCTTGTATGTAGCAGTCAGATACTGTATTGGCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
||
| CDS-3UTR CAA 90 bp | AATAGCCCCTTAATGCTTGTTCTTCATAAACTGAACGGCATTTTGGCTTATGCTACCAGTGTGCCTCGCTaGCCAAGACTTCTTGCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: NSPLMLVLHKLNGILAYATSVPR*PRLLAF Trigger: AAAAGCAAGAAGTCTTGGCAAGCGAGGCACACTGGT...AGCATAAGCCAAAATGCCGTTCAGTTTATGAAGAACAAGCATTAAGGGGCTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
||
| CDS CCA 90 bp | ATCCACGAGACCATGTTCAATGATTTCAACCAAACTTCTGAGATGTaGCAAGATAGCACAGCCCATGAGAATGGCTATCTGTTGTACAAT | + |
|
Preference number: 5 (lower is better) Translates to: IHETMFNDFNQTSEM*QDSTAHENGYLLYN Trigger: ATTGTACAACAGATAGCCATTCTCATGGGCTGTGCTATCTTGCCACATCTCAGAAGTTTGGTTGAAATCATTGAACATGGTCTCGTGGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
||
| CDS CCA 90 bp | AAGTTCGTAACGAATATAGGTGTTCTTATCGTCATTGTAGATTCGTaGGTAATGTGCTATGAGAGCATCCTGGGAGCCAATGTAGATGGA | + |
|
Preference number: 5 (lower is better) Translates to: KFVTNIGVLIVIVDS*VMCYESILGANVDG Trigger: TCCATCTACATTGGCTCCCAGGATGCTCTCATAGCACATTACCCACGAATCTACAATGACGATAAGAACACCTATATTCGTTACGAACTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
||
| CDS-3UTR CAA 90 bp | AATAGCCCCTTAATGCTTGTTCTTCATAAACTGAACGGCATTTTGGCTTATGCTAGCTGCCTTCTTGCCTaGAATTTCTCGAATCTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: NSPLMLVLHKLNGILAYASCLLA*NFSNLC Trigger: GCACAGATTCGAGAAATTCAAGGCAAGAAGGCAGCT...AGCATAAGCCAAAATGCCGTTCAGTTTATGAAGAACAAGCATTAAGGGGCTATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
||
| CDS-3UTR CAA 90 bp | AAGCCAATACAGTATCTGACTGCTACATACAAGCTAAGCAAATCTAGGCATCTCCTGCACCTACTTTGTTaGCCAACTCCACAGTTGTAT | + |
|
Preference number: 5 (lower is better) Translates to: KPIQYLTATYKLSKSRHLLHLLC*PTPQLY Trigger: ATACAACTGTGGAGTTGGCAAACAAAGTAGGTGCAG...GAGATGCCTAGATTTGCTTAGCTTGTATGTAGCAGTCAGATACTGTATTGGCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
||
| CDS-3UTR CAA 90 bp | AATAGCCCCTTAATGCTTGTTCTTCATAAACTGAACGGCATTTTGGCTTATGCTTCTGCTGCACCTACTTaGTTTGCCAACTCCACAGTT | + |
|
Preference number: 5 (lower is better) Translates to: NSPLMLVLHKLNGILAYASAAPT*FANSTV Trigger: AACTGTGGAGTTGGCAAACAAAGTAGGTGCAGCAGA...AGCATAAGCCAAAATGCCGTTCAGTTTATGAAGAACAAGCATTAAGGGGCTATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
||
| CDS-3UTR CAA 90 bp | TTACCTCCATCAGGAAAATGTCACTTAAGGGGTAAGCAGTCTCCTGTGAGCTGTCATCAGTTTTTCCTCTaGACAAGTCTTCATAACAAC | + |
|
Preference number: 5 (lower is better) Translates to: LPPSGKCHLRGKQSPVSCHQFFL*TSLHNN Trigger: GTTGTTATGAAGACTTGTCAAGAGGAAAAACTGATG...ACAGCTCACAGGAGACTGCTTACCCCTTAAGTGACATTTTCCTGATGGAGGTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
||
| CDS TCA 90 bp | TATAGGTGTTCTTATCGTCATTGTAGATTCGTGGGTAATGTGCTATaGGAGCATCCTGGGAGCCAATGTAGATGGAGTTGTAAATTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: YRCSYRHCRFVGNVL*EHPGSQCRWSCKFS Trigger: GGAAAATTTACAACTCCATCTACATTGGCTCCCAGGATGCTCTCATAGCACATTACCCACGAATCTACAATGACGATAAGAACACCTATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
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| CDS GCA 90 bp | ACGAATATAGGTGTTCTTATCGTCATTGTAGATTCGTGGGTAATGTaGTATGAGAGCATCCTGGGAGCCAATGTAGATGGAGTTGTAAAT | + |
|
Preference number: 5 (lower is better) Translates to: TNIGVLIVIVDSWVM*YESILGANVDGVVN Trigger: ATTTACAACTCCATCTACATTGGCTCCCAGGATGCTCTCATAGCACATTACCCACGAATCTACAATGACGATAAGAACACCTATATTCGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
||
| CDS-3UTR CAA 90 bp | AATAGCCCCTTAATGCTTGTTCTTCATAAACTGAACGGCATTTTGGCTTATGCTTTGCCAACTCCACAGTaGTATCAACTAACTGTCGGT | + |
|
Preference number: 5 (lower is better) Translates to: NSPLMLVLHKLNGILAYALPTPQ*YQLTVG Trigger: ACCGACAGTTAGTTGATACAACTGTGGAGTTGGCAA...AGCATAAGCCAAAATGCCGTTCAGTTTATGAAGAACAAGCATTAAGGGGCTATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
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| CDS-3UTR CAA 90 bp | CAGCTTCTCCACTTTATAAGCACAGGCCAAAGTTGGACAAGAAGTAAAATATATCCAGATGGCTGGTCATaGACACTTTTCATAGTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: QLLHFISTGQSWTRSKIYPDGWS*TLFIVL Trigger: CAGAACTATGAAAAGTGTCAATGACCAGCCATCTGG...ATATATTTTACTTCTTGTCCAACTTTGGCCTGTGCTTATAAAGTGGAGAAGCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
||
| CDS GCA 90 bp | CTTCAAGTTCAGTTGCAGCAATTGATGTCACATATCCAGCAAATCTaGTATCACTTCCACCATAAATTTCTTGGTCATAATAACCTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: LQVQLQQLMSHIQQI*YHFHHKFLGHNNLW Trigger: CCACAGGTTATTATGACCAAGAAATTTATGGTGGAAGTGATAGCAGATTTGCTGGATATGTGACATCAATTGCTGCAACTGAACTTGAAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027127.14 ENSMUST00000191303.2 |
||
| CDS-3UTR CAA 90 bp | AATAGCCCCTTAATGCTTGTTCTTCATAAACTGAACGGCATTTTGGCTTATGCTCATCTTCAAGTTCAGTaGCAGCAATTGATGTCACAT | + |
|
Preference number: 5 (lower is better) Translates to: NSPLMLVLHKLNGILAYAHLQVQ*QQLMSH Trigger: ATGTGACATCAATTGCTGCAACTGAACTTGAAGATG...AGCATAAGCCAAAATGCCGTTCAGTTTATGAAGAACAAGCATTAAGGGGCTATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
||
| CDS-3UTR CAA 90 bp | AAGCCAATACAGTATCTGACTGCTACATACAAGCTAAGCAAATCTAGGCATCTCAATACCATCAATCAGTaGTTCCTCAAGTTTATGGTC | + |
|
Preference number: 5 (lower is better) Translates to: KPIQYLTATYKLSKSRHLNTINQ*FLKFMV Trigger: GACCATAAACTTGAGGAACAACTGATTGATGGTATT...GAGATGCCTAGATTTGCTTAGCTTGTATGTAGCAGTCAGATACTGTATTGGCTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
||
| CDS-3UTR CAA 90 bp | AATAGCCCCTTAATGCTTGTTCTTCATAAACTGAACGGCATTTTGGCTTATGCTTATGGTTTGACTCGTTaGCCAAGAGCATTAACTACT | + |
|
Preference number: 5 (lower is better) Translates to: NSPLMLVLHKLNGILAYAYGLTR*PRALTT Trigger: AGTAGTTAATGCTCTTGGCAAACGAGTCAAACCATA...AGCATAAGCCAAAATGCCGTTCAGTTTATGAAGAACAAGCATTAAGGGGCTATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
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| CDS-3UTR CAA 90 bp | CAGCTTCTCCACTTTATAAGCACAGGCCAAAGTTGGACAAGAAGTAAAATATATTCCTCATCCATTCTCTaGCAGATACATATTCAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: QLLHFISTGQSWTRSKIYSSSIL*QIHIQL Trigger: GAGCTGAATATGTATCTGCAAGAGAATGGATGAGGA...ATATATTTTACTTCTTGTCCAACTTTGGCCTGTGCTTATAAAGTGGAGAAGCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
||
| CDS GCA 90 bp | AAAGTGTTTAAAGAAAGGTGGAAGAATCTCTGTTTTAATGTAGTTTaGTTCTACACCATCAGTTCCACAACACTGTTTCACCACCTTCAA | + |
|
Preference number: 5 (lower is better) Translates to: KVFKERWKNLCFNVV*FYTISSTTLFHHLQ Trigger: TTGAAGGTGGTGAAACAGTGTTGTGGAACTGATGGTGTAGAAGCAAACTACATTAAAACAGAGATTCTTCCACCTTTCTTTAAACACTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
||
| CDS GCA 90 bp | GTCTTCATAACAACAGCAGTTCGAGAAATCAAGTCAGCTGCTTGTTaGCTAACTTTTGCTGATTTGTTATTTAAACGCCATAAAACTGTA | + |
|
Preference number: 5 (lower is better) Translates to: VFITTAVREIKSAAC*LTFADLLFKRHKTV Trigger: TACAGTTTTATGGCGTTTAAATAACAAATCAGCAAAAGTTAGGCAACAAGCAGCTGACTTGATTTCTCGAACTGCTGTTGTTATGAAGAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
||
| CDS-3UTR CAA 90 bp | TTCCTTAGTCAAATGTTGTTCTCGCATAACATCCATGTAGGTTCTAGCATTCATTCCACCATAAATTTCTaGGTCATAATAACCTGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: FLSQMLFSHNIHVGSSIHSTINF*VIITCG Trigger: TCCACAGGTTATTATGACCAAGAAATTTATGGTGGA...ATGAATGCTAGAACCTACATGGATGTTATGCGAGAACAACATTTGACTAAGGAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191303.2 |
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| CDS TCA 90 bp | TTATACAATATTCTATCAATAACTTTCACAAGTAAATGTCGCTCTTaGTCCTCAAGTGTAGGGGACATCAACAGAGGAAGAATCTGGTTA | + |
|
Preference number: 5 (lower is better) Translates to: LYNILSITFTSKCRS*SSSVGDINRGRIWL Trigger: TAACCAGATTCTTCCTCTGTTGATGTCCCCTACACTTGAGGATCAAGAGCGACATTTACTTGTGAAAGTTATTGATAGAATATTGTATAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
||
| CDS CCA 72 bp | GGAAGTTGCACCACCATGGCCCGGGGTTGCATGGCCTaGTGTGTCGCCTCGCCCAGGAGTAGCAGCTCCCGC | + |
|
Preference number: 6 (lower is better) Translates to: GSCTTMARGCMA*CVASPRSSSSR Trigger: GCGGGAGCTGCTACTCCTGGGCGAGGCGACACACCAGGCCATGCAACCCCGGGCCATGGTGGTGCAACTTCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
||
| CDS GCA 72 bp | ACGAGCACTGGAAGTTGCACCACCATGGCCCGGGGTTaGATGGCCTGGTGTGTCGCCTCGCCCAGGAGTAGC | + |
|
Preference number: 6 (lower is better) Translates to: TSTGSCTTMARG*MAWCVASPRSS Trigger: GCTACTCCTGGGCGAGGCGACACACCAGGCCATGCAACCCCGGGCCATGGTGGTGCAACTTCCAGTGCTCGT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
||
| CDS CCA 72 bp | GCACTGGAAGTTGCACCACCATGGCCCGGGGTTGCATaGCCTGGTGTGTCGCCTCGCCCAGGAGTAGCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: ALEVAPPWPGVA*PGVSPRPGVAA Trigger: AGCTGCTACTCCTGGGCGAGGCGACACACCAGGCCATGCAACCCCGGGCCATGGTGGTGCAACTTCCAGTGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
||
| CDS TCA 72 bp | TCGCCTCGCCCAGGAGTAGCAGCTCCCGCAGGTGTATaGCTCGGTGTAGGGTCCCATATTTTTGAGCCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: SPRPGVAAPAGV*LGVGSHIFEPG Trigger: CCCAGGCTCAAAAATATGGGACCCTACACCGAGTCATACACCTGCGGGAGCTGCTACTCCTGGGCGAGGCGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
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| CDS CCA 72 bp | CATCTGTTTTTACGAGCACTGGAAGTTGCACCACCATaGCCCGGGGTTGCATGGCCTGGTGTGTCGCCTCGC | + |
|
Preference number: 6 (lower is better) Translates to: HLFLRALEVAPP*PGVAWPGVSPR Trigger: GCGAGGCGACACACCAGGCCATGCAACCCCGGGCCATGGTGGTGCAACTTCCAGTGCTCGTAAAAACAGATG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
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| CDS CAA 72 bp | GGGTCTCATCCCATCTGTTTTTACGAGCACTGGAAGTaGCACCACCATGGCCCGGGGTTGCATGGCCTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: GSHPICFYEHWK*HHHGPGLHGLV Trigger: CACCAGGCCATGCAACCCCGGGCCATGGTGGTGCAACTTCCAGTGCTCGTAAAAACAGATGGGATGAGACCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
||
| CDS GCA 72 bp | GGTCTCATCCCATCTGTTTTTACGAGCACTGGAAGTTaGACCACCATGGCCCGGGGTTGCATGGCCTGGTGT | + |
|
Preference number: 6 (lower is better) Translates to: GLIPSVFTSTGS*TTMARGCMAWC Trigger: ACACCAGGCCATGCAACCCCGGGCCATGGTGGTGCAACTTCCAGTGCTCGTAAAAACAGATGGGATGAGACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
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| CDS CCA 72 bp | TCTCTGCCTGATCCCAACTCGATAGCTTTTTGGGAGTaGCACCAGGAGTCTGGTCAGCGGTCTGATCCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: SLPDPNSIAFWE*HQESGQRSDPS Trigger: GCTGGGATCAGACCGCTGACCAGACTCCTGGTGCCACTCCCAAAAAGCTATCGAGTTGGGATCAGGCAGAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
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| CDS CCA 72 bp | CAGGGGTCTCTGCCTGATCCCAACTCGATAGCTTTTTaGGAGTGGCACCAGGAGTCTGGTCAGCGGTCTGAT | + |
|
Preference number: 6 (lower is better) Translates to: QGSLPDPNSIAF*EWHQESGQRSD Trigger: ATCAGACCGCTGACCAGACTCCTGGTGCCACTCCCAAAAAGCTATCGAGTTGGGATCAGGCAGAGACCCCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
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| CDS CCA 72 bp | GCCTTCAAGAAAGCAGCCAGACCCTTTCCTCTGTGTTaGCGGATACCCTTCCATAGGGGCTTGAGCACAGAA | + |
|
Preference number: 6 (lower is better) Translates to: AFKKAARPFPLC*RIPFHRGLSTE Trigger: TTCTGTGCTCAAGCCCCTATGGAAGGGTATCCGCCAACACAGAGGAAAGGGTCTGGCTGCTTTCTTGAAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
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| CDS CCA 72 bp | GCAACCCTCAGGCCCTCCAGAGCTCCCATAACTGCCTaGATTACATGGGGAGATGTCTCAAACACATTAGGC | + |
|
Preference number: 6 (lower is better) Translates to: ATLRPSRAPITA*ITWGDVSNTLG Trigger: GCCTAATGTGTTTGAGACATCTCCCCATGTAATCCAGGCAGTTATGGGAGCTCTGGAGGGCCTGAGGGTTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
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| CDS TCA 72 bp | CGCAGGTGTATGACTCGGTGTAGGGTCCCATATTTTTaGGCCTGGGGTTGCGCCAGGTGTTTCACTTCCTTT | + |
|
Preference number: 6 (lower is better) Translates to: RRCMTRCRVPYF*AWGCARCFTSF Trigger: AAAGGAAGTGAAACACCTGGCGCAACCCCAGGCTCAAAAATATGGGACCCTACACCGAGTCATACACCTGCG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
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| CDS TCA 72 bp | GACATGTGCTGCACCACTGCACTCGCTGTCTGTCTGTaGACAAGGTCCCTGTCCATTAACGCATCCTCAAGT | + |
|
Preference number: 6 (lower is better) Translates to: DMCCTTALAVCL*TRSLSINASSS Trigger: ACTTGAGGATGCGTTAATGGACAGGGACCTTGTTCACAGACAGACAGCGAGTGCAGTGGTGCAGCACATGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
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| CDS CCA 72 bp | ACCCAAAGGTGTAGGAGTTGCTGTCAGCTTTCGAGCTaGAGTTCGAATAGGAACATAACCAGCTGGAGGGGG | + |
|
Preference number: 6 (lower is better) Translates to: TQRCRSCCQLSS*SSNRNITSWRG Trigger: CCCCCTCCAGCTGGTTATGTTCCTATTCGAACTCCAGCTCGAAAGCTGACAGCAACTCCTACACCTTTGGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
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| CDS CAA 72 bp | TTGAGCCTGGGGTTGCGCCAGGTGTTTCACTTCCTTTaGCACGACCCGGTGTCTCATCCCATCTTAAAGATG | + |
|
Preference number: 6 (lower is better) Translates to: LSLGLRQVFHFL*HDPVSHPILKM Trigger: CATCTTTAAGATGGGATGAGACACCGGGTCGTGCAAAAGGAAGTGAAACACCTGGCGCAACCCCAGGCTCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
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| CDS TCA 72 bp | TTTCCTGGAGTCAGAACAGGAGTGCTTCCACCCATTTaGCTCGCCGGCGTTTCATCCCAACGAGACTTTCTT | + |
|
Preference number: 6 (lower is better) Translates to: FPGVRTGVLPPI*LAGVSSQRDFL Trigger: AAGAAAGTCTCGTTGGGATGAAACGCCGGCGAGTCAAATGGGTGGAAGCACTCCTGTTCTGACTCCAGGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
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| CDS TCA 72 bp | CAGAGAATCCTCACAGCCAAATCCGTAAACACCAAGTaGCATGTGCTGCACCACTGCACTCGCTGTCTGTCT | + |
|
Preference number: 6 (lower is better) Translates to: QRILTAKSVNTK*HVLHHCTRCLS Trigger: AGACAGACAGCGAGTGCAGTGGTGCAGCACATGTCACTTGGTGTTTACGGATTTGGCTGTGAGGATTCTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
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| CDS GCA 72 bp | TTCCGAGCTGGGTGGAACAGACCCTGTAAGCAATACTaGAACATTCTGCATGGTCCAATAGCAACCCTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: FRAGWNRPCKQY*NILHGPIATLR Trigger: CCTGAGGGTTGCTATTGGACCATGCAGAATGTTGCAGTATTGCTTACAGGGTCTGTTCCACCCAGCTCGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
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| CDS CCA 72 bp | TATGTGACCTGGAGTCGGGGTAGCCATGTTCATGGCTaGTGTGCCAATTGGTGTTTTTCCTGGAGTCAGAAC | + |
|
Preference number: 6 (lower is better) Translates to: YVTWSRGSHVHG*CANWCFSWSQN Trigger: GTTCTGACTCCAGGAAAAACACCAATTGGCACACCAGCCATGAACATGGCTACCCCGACTCCAGGTCACATA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
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| CDS CAA 72 bp | TTTTCCTGGAGTCAGAACAGGAGTGCTTCCACCCATTaGACTCGCCGGCGTTTCATCCCAACGAGACTTTCT | + |
|
Preference number: 6 (lower is better) Translates to: FSWSQNRSASTH*TRRRFIPTRLS Trigger: AGAAAGTCTCGTTGGGATGAAACGCCGGCGAGTCAAATGGGTGGAAGCACTCCTGTTCTGACTCCAGGAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
||
| CDS TCA 72 bp | AGGACGATGCTCAGCAAATGGATCATACTGCTCTGTTaGCTGTGGTATATCATTAAGCAACGCCACGGGGGC | + |
|
Preference number: 6 (lower is better) Translates to: RTMLSKWIILLC*LWYIIKQRHGG Trigger: GCCCCCGTGGCGTTGCTTAATGATATACCACAGTCAACAGAGCAGTATGATCCATTTGCTGAGCATCGTCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027127.14 ENSMUST00000191303.2 |
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| CDS GCA 72 bp | GGAATCAAGGCCCACTCCTTGGGCTTCATCAAGAGCTaGCTTCTTGCCTTGAATTTCTCGAATCTGTGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: GIKAHSLGFIKS*LLALNFSNLCF Trigger: GAAGCACAGATTCGAGAAATTCAAGGCAAGAAGGCAGCTCTTGATGAAGCCCAAGGAGTGGGCCTTGATTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027127.14 ENSMUST00000191303.2 |
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| CDS GCA 72 bp | GTGGAAACCAGTCATACCACCCAAAGGTGTAGGAGTTaGTGTCAGCTTTCGAGCTGGAGTTCGAATAGGAAC | + |
|
Preference number: 6 (lower is better) Translates to: VETSHTTQRCRS*CQLSSWSSNRN Trigger: GTTCCTATTCGAACTCCAGCTCGAAAGCTGACAGCAACTCCTACACCTTTGGGTGGTATGACTGGTTTCCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
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| CDS GCA 72 bp | GCAATGGCCAGAGCACTGATGGTCCGAACTTTCTGCTaGTCATCCACGAGACCATGTTCAATGATTTCAACC | + |
|
Preference number: 6 (lower is better) Translates to: AMARALMVRTFC*SSTRPCSMIST Trigger: GGTTGAAATCATTGAACATGGTCTCGTGGATGAGCAGCAGAAAGTTCGGACCATCAGTGCTCTGGCCATTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
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| CDS GCA 72 bp | GCAGCAATGGCCAGAGCACTGATGGTCCGAACTTTCTaGTGCTCATCCACGAGACCATGTTCAATGATTTCA | + |
|
Preference number: 6 (lower is better) Translates to: AAMARALMVRTF*CSSTRPCSMIS Trigger: TGAAATCATTGAACATGGTCTCGTGGATGAGCAGCAGAAAGTTCGGACCATCAGTGCTCTGGCCATTGCTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
||
| CDS GCA 72 bp | AATAGCAACCCTCAGGCCCTCCAGAGCTCCCATAACTaGCTGGATTACATGGGGAGATGTCTCAAACACATT | + |
|
Preference number: 6 (lower is better) Translates to: NSNPQALQSSHN*LDYMGRCLKHI Trigger: AATGTGTTTGAGACATCTCCCCATGTAATCCAGGCAGTTATGGGAGCTCTGGAGGGCCTGAGGGTTGCTATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
||
| CDS CAA 90 bp | ATCAAGGCCCACTCCTTGGGCTTCATCAAGAGCTGCCTTCTTGCCTaGAATTTCTCGAATCTGTGCTTCGATATCTTCGTGAGTCTTGGC | + |
|
Preference number: 6 (lower is better) Translates to: IKAHSLGFIKSCLLA*NFSNLCFDIFVSLG Trigger: GCCAAGACTCACGAAGATATCGAAGCACAGATTCGAGAAATTCAAGGCAAGAAGGCAGCTCTTGATGAAGCCCAAGGAGTGGGCCTTGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027127.14 ENSMUST00000191303.2 |
||
| CDS GCA 72 bp | GAGCACAGAATCAAAAGACTCAATACCATAAGGAGTTaGTGCCTCAGCCAAAGCAGCAATGGCCAGAGCACT | + |
|
Preference number: 6 (lower is better) Translates to: EHRIKRLNTIRS*CLSQSSNGQST Trigger: AGTGCTCTGGCCATTGCTGCTTTGGCTGAGGCAGCAACTCCTTATGGTATTGAGTCTTTTGATTCTGTGCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
||
| CDS CAA 90 bp | GGATCAAGACGCTCTGGGGAAATTATCATGGTCCGCCTATGCTTTTaGTATTCATCTTCCCGATCGGCAATCTTTGGAGGACGATGCTCA | + |
|
Preference number: 6 (lower is better) Translates to: GSRRSGEIIMVRLCF*YSSSRSAIFGGRCS Trigger: TGAGCATCGTCCTCCAAAGATTGCCGATCGGGAAGATGAATACAAAAAGCATAGGCGGACCATGATAATTTCCCCAGAGCGTCTTGATCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027127.14 ENSMUST00000191303.2 |
||
| CDS CAA 90 bp | AATTGGTGTTTTTCCTGGAGTCAGAACAGGAGTGCTTCCACCCATTaGACTCGCCGGCGTTTCATCCCAACGAGACTTTCTTTTACTTGC | + |
|
Preference number: 6 (lower is better) Translates to: NWCFSWSQNRSASTH*TRRRFIPTRLSFTC Trigger: GCAAGTAAAAGAAAGTCTCGTTGGGATGAAACGCCGGCGAGTCAAATGGGTGGAAGCACTCCTGTTCTGACTCCAGGAAAAACACCAATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
||
| CDS CAA 90 bp | TGGTCCGCCTATGCTTTTTGTATTCATCTTCCCGATCGGCAATCTTaGGAGGACGATGCTCAGCAAATGGATCATACTGCTCTGTTGACT | + |
|
Preference number: 6 (lower is better) Translates to: WSAYAFCIHLPDRQS*EDDAQQMDHTALLT Trigger: AGTCAACAGAGCAGTATGATCCATTTGCTGAGCATCGTCCTCCAAAGATTGCCGATCGGGAAGATGAATACAAAAAGCATAGGCGGACCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027127.14 ENSMUST00000191303.2 |
||
| CDS CAA 90 bp | CCCAGATGGCTGGTCATTGACACTTTTCATAGTTCTGTCTTCAGTTaGCATGTGGAAACCAGTCATACCACCCAAAGGTGTAGGAGTTGC | + |
|
Preference number: 6 (lower is better) Translates to: PRWLVIDTFHSSVFS*HVETSHTTQRCRSC Trigger: GCAACTCCTACACCTTTGGGTGGTATGACTGGTTTCCACATGCAAACTGAAGACAGAACTATGAAAAGTGTCAATGACCAGCCATCTGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
||
| CDS TCA 72 bp | GGTCCAGCTCCAAATTCTCGAGCTTTATCAGTAATCTaGCGTAAGGCAGCCTTTCTCATTGGAGGTGTACCA | + |
|
Preference number: 6 (lower is better) Translates to: GPAPNSRALSVI*RKAAFLIGGVP Trigger: TGGTACACCTCCAATGAGAAAGGCTGCCTTACGTCAGATTACTGATAAAGCTCGAGAATTTGGAGCTGGACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
||
| CDS TCA 72 bp | TTCCTCTGTGTTGGCGGATACCCTTCCATAGGGGCTTaGGCACAGAATCAAAAGACTCAATACCATAAGGAG | + |
|
Preference number: 6 (lower is better) Translates to: FLCVGGYPSIGA*AQNQKTQYHKE Trigger: CTCCTTATGGTATTGAGTCTTTTGATTCTGTGCTCAAGCCCCTATGGAAGGGTATCCGCCAACACAGAGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
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| CDS CCA 72 bp | CTTTCGAGCTGGAGTTCGAATAGGAACATAACCAGCTaGAGGGGGAAGTACCTTATATCCTTCTGGGAACAT | + |
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Preference number: 6 (lower is better) Translates to: LSSWSSNRNITS*RGKYLISFWEH Trigger: ATGTTCCCAGAAGGATATAAGGTACTTCCCCCTCCAGCTGGTTATGTTCCTATTCGAACTCCAGCTCGAAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
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| CDS CAA 72 bp | CACTCCTTGGGCTTCATCAAGAGCTGCCTTCTTGCCTaGAATTTCTCGAATCTGTGCTTCGATATCTTCGTG | + |
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Preference number: 6 (lower is better) Translates to: HSLGFIKSCLLA*NFSNLCFDIFV Trigger: CACGAAGATATCGAAGCACAGATTCGAGAAATTCAAGGCAAGAAGGCAGCTCTTGATGAAGCCCAAGGAGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027127.14 ENSMUST00000191303.2 |
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| CDS CAA 72 bp | CGCTCTGGGGAAATTATCATGGTCCGCCTATGCTTTTaGTATTCATCTTCCCGATCGGCAATCTTTGGAGGA | + |
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Preference number: 6 (lower is better) Translates to: RSGEIIMVRLCF*YSSSRSAIFGG Trigger: TCCTCCAAAGATTGCCGATCGGGAAGATGAATACAAAAAGCATAGGCGGACCATGATAATTTCCCCAGAGCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027127.14 ENSMUST00000191303.2 |
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| CDS CAA 72 bp | TGGCAAGATAGCACAGCCCATGAGAATGGCTATCTGTaGTACAATCTTAATACCAGTGTGCCTCGCTTGCCA | + |
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Preference number: 6 (lower is better) Translates to: WQDSTAHENGYL*YNLNTSVPRLP Trigger: TGGCAAGCGAGGCACACTGGTATTAAGATTGTACAACAGATAGCCATTCTCATGGGCTGTGCTATCTTGCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
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| CDS CAA 90 bp | TCTGAGATGTGGCAAGATAGCACAGCCCATGAGAATGGCTATCTGTaGTACAATCTTAATACCAGTGTGCCTCGCTTGCCAAGACTTCTT | + |
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Preference number: 6 (lower is better) Translates to: SEMWQDSTAHENGYL*YNLNTSVPRLPRLL Trigger: AAGAAGTCTTGGCAAGCGAGGCACACTGGTATTAAGATTGTACAACAGATAGCCATTCTCATGGGCTGTGCTATCTTGCCACATCTCAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
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| CDS TCA 72 bp | GAACTCTGTATTCATTCATTAAGGCAGGCAGTACTGTaGAGGGGGAGCATGTTTCAGCAACAATGGCTATGG | + |
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Preference number: 6 (lower is better) Translates to: ELCIHSLRQAVL*RGSMFQQQWLW Trigger: CCATAGCCATTGTTGCTGAAACATGCTCCCCCTTCACAGTACTGCCTGCCTTAATGAATGAATACAGAGTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
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| CDS GCA 72 bp | GGTGTTCTTATCGTCATTGTAGATTCGTGGGTAATGTaGTATGAGAGCATCCTGGGAGCCAATGTAGATGGA | + |
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Preference number: 6 (lower is better) Translates to: GVLIVIVDSWVM*YESILGANVDG Trigger: TCCATCTACATTGGCTCCCAGGATGCTCTCATAGCACATTACCCACGAATCTACAATGACGATAAGAACACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
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| CDS CCA 72 bp | CATGATATCCAGGCTTCTTCTGACCGAGCAAGCTCGTaGATGATGAGTAGTCATCGTCATCATCTTCAAGTT | + |
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Preference number: 6 (lower is better) Translates to: HDIQASSDRASS*MMSSHRHHLQV Trigger: AACTTGAAGATGATGACGATGACTACTCATCATCCACGAGCTTGCTCGGTCAGAAGAAGCCTGGATATCATG 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027127.14 ENSMUST00000191303.2 |
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| CDS CCA 72 bp | AGTCTTCCCTCCATCTGCAAAAGGATCAAGACGCTCTaGGGAAATTATCATGGTCCGCCTATGCTTTTTGTA | + |
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Preference number: 6 (lower is better) Translates to: SLPSICKRIKTL*GNYHGPPMLFV Trigger: TACAAAAAGCATAGGCGGACCATGATAATTTCCCCAGAGCGTCTTGATCCTTTTGCAGATGGAGGGAAGACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
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| CDS CCA 72 bp | ATCCCAACGAGACTTTCTTTTACTTGCTCCAGGAGTTaGTGTTTCACCAATAGAGTCTCCACCTCGATCTGT | + |
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Preference number: 6 (lower is better) Translates to: IPTRLSFTCSRS*CFTNRVSTSIC Trigger: ACAGATCGAGGTGGAGACTCTATTGGTGAAACACCAACTCCTGGAGCAAGTAAAAGAAAGTCTCGTTGGGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
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| CDS CAA 90 bp | ACAATCTTAATACCAGTGTGCCTCGCTTGCCAAGACTTCTTGCTTTaGCACACAGCTTTTAAGAAAGGCAATAAAGAAGGGATGCCCAGG | + |
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Preference number: 6 (lower is better) Translates to: TILIPVCLACQDFLL*HTAFKKGNKEGMPR Trigger: CCTGGGCATCCCTTCTTTATTGCCTTTCTTAAAAGCTGTGTGCAAAAGCAAGAAGTCTTGGCAAGCGAGGCACACTGGTATTAAGATTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
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| CDS TCA 72 bp | TGTAGATGGAGTTGTAAATTTTCCAATATACGTCTCTaGCTTTCCGAGCTGGGTGGAACAGACCCTGTAAGC | + |
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Preference number: 6 (lower is better) Translates to: CRWSCKFSNIRL*LSELGGTDPVS Trigger: GCTTACAGGGTCTGTTCCACCCAGCTCGGAAAGTCAGAGACGTATATTGGAAAATTTACAACTCCATCTACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
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| CDS TCA 72 bp | TCTTATCGTCATTGTAGATTCGTGGGTAATGTGCTATaGGAGCATCCTGGGAGCCAATGTAGATGGAGTTGT | + |
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Preference number: 6 (lower is better) Translates to: SYRHCRFVGNVL*EHPGSQCRWSC Trigger: ACAACTCCATCTACATTGGCTCCCAGGATGCTCTCATAGCACATTACCCACGAATCTACAATGACGATAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
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| CDS GCA 72 bp | TCAAGACGCTCTGGGGAAATTATCATGGTCCGCCTATaGTTTTTGTATTCATCTTCCCGATCGGCAATCTTT | + |
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Preference number: 6 (lower is better) Translates to: SRRSGEIIMVRL*FLYSSSRSAIF Trigger: AAAGATTGCCGATCGGGAAGATGAATACAAAAAGCATAGGCGGACCATGATAATTTCCCCAGAGCGTCTTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027127.14 ENSMUST00000191303.2 |
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| CDS CCA 72 bp | CACTTCCACCATAAATTTCTTGGTCATAATAACCTGTaGAATCAAGGCCCACTCCTTGGGCTTCATCAAGAG | + |
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Preference number: 6 (lower is better) Translates to: HFHHKFLGHNNL*NQGPLLGLHQE Trigger: CTCTTGATGAAGCCCAAGGAGTGGGCCTTGATTCCACAGGTTATTATGACCAAGAAATTTATGGTGGAAGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027127.14 ENSMUST00000191303.2 |
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| CDS CCA 72 bp | ATGCTTTTTGTATTCATCTTCCCGATCGGCAATCTTTaGAGGACGATGCTCAGCAAATGGATCATACTGCTC | + |
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Preference number: 6 (lower is better) Translates to: MLFVFIFPIGNL*RTMLSKWIILL Trigger: GAGCAGTATGATCCATTTGCTGAGCATCGTCCTCCAAAGATTGCCGATCGGGAAGATGAATACAAAAAGCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027127.14 ENSMUST00000191303.2 |
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| CDS CCA 72 bp | ATTTTCCAATATACGTCTCTGACTTTCCGAGCTGGGTaGAACAGACCCTGTAAGCAATACTGCAACATTCTG | + |
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Preference number: 6 (lower is better) Translates to: IFQYTSLTFRAG*NRPCKQYCNIL Trigger: CAGAATGTTGCAGTATTGCTTACAGGGTCTGTTCCACCCAGCTCGGAAAGTCAGAGACGTATATTGGAAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
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| CDS CAA 72 bp | ATACCAGTGTGCCTCGCTTGCCAAGACTTCTTGCTTTaGCACACAGCTTTTAAGAAAGGCAATAAAGAAGGG | + |
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Preference number: 6 (lower is better) Translates to: IPVCLACQDFLL*HTAFKKGNKEG Trigger: CCCTTCTTTATTGCCTTTCTTAAAAGCTGTGTGCAAAAGCAAGAAGTCTTGGCAAGCGAGGCACACTGGTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
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| CDS CAA 90 bp | TGTCACATATCCAGCAAATCTGCTATCACTTCCACCATAAATTTCTaGGTCATAATAACCTGTGGAATCAAGGCCCACTCCTTGGGCTTC | + |
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Preference number: 6 (lower is better) Translates to: CHISSKSAITSTINF*VIITCGIKAHSLGF Trigger: GAAGCCCAAGGAGTGGGCCTTGATTCCACAGGTTATTATGACCAAGAAATTTATGGTGGAAGTGATAGCAGATTTGCTGGATATGTGACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027127.14 ENSMUST00000191303.2 |
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| CDS CCA 72 bp | ACGAATATAGGTGTTCTTATCGTCATTGTAGATTCGTaGGTAATGTGCTATGAGAGCATCCTGGGAGCCAAT | + |
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Preference number: 6 (lower is better) Translates to: TNIGVLIVIVDS*VMCYESILGAN Trigger: ATTGGCTCCCAGGATGCTCTCATAGCACATTACCCACGAATCTACAATGACGATAAGAACACCTATATTCGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
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| CDS CCA 72 bp | AGAATAGAAGCCATCTGCAAAAGGATCAAGACGCTCTaGGGAAATTATCATGGTCCGCCTATGCTTTTTGTA | + |
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Preference number: 6 (lower is better) Translates to: RIEAICKRIKTL*GNYHGPPMLFV Trigger: TACAAAAAGCATAGGCGGACCATGATAATTTCCCCAGAGCGTCTTGATCCTTTTGCAGATGGCTTCTATTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000191303.2 |
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| CDS CAA 72 bp | TCCAGCAAATCTGCTATCACTTCCACCATAAATTTCTaGGTCATAATAACCTGTGGAATCAAGGCCCACTCC | + |
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Preference number: 6 (lower is better) Translates to: SSKSAITSTINF*VIITCGIKAHS Trigger: GGAGTGGGCCTTGATTCCACAGGTTATTATGACCAAGAAATTTATGGTGGAAGTGATAGCAGATTTGCTGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027127.14 ENSMUST00000191303.2 |
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| CDS CAA 72 bp | TATGCTTTTTGTATTCATCTTCCCGATCGGCAATCTTaGGAGGACGATGCTCAGCAAATGGATCATACTGCT | + |
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Preference number: 6 (lower is better) Translates to: YAFCIHLPDRQS*EDDAQQMDHTA Trigger: AGCAGTATGATCCATTTGCTGAGCATCGTCCTCCAAAGATTGCCGATCGGGAAGATGAATACAAAAAGCATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027127.14 ENSMUST00000191303.2 |
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| CDS CAA 90 bp | ATAAATTTCTTGGTCATAATAACCTGTGGAATCAAGGCCCACTCCTaGGGCTTCATCAAGAGCTGCCTTCTTGCCTTGAATTTCTCGAAT | + |
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Preference number: 6 (lower is better) Translates to: INFLVIITCGIKAHS*GFIKSCLLALNFSN Trigger: ATTCGAGAAATTCAAGGCAAGAAGGCAGCTCTTGATGAAGCCCAAGGAGTGGGCCTTGATTCCACAGGTTATTATGACCAAGAAATTTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027127.14 ENSMUST00000191303.2 |
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| CDS GCA 72 bp | CTTCAGATCATCAACAATCCTAGATATGATCTCTGCTaGACCTACTTTGTTTGCCAACTCCACAGTTGTATC | + |
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Preference number: 6 (lower is better) Translates to: LQIINNPRYDLC*TYFVCQLHSCI Trigger: GATACAACTGTGGAGTTGGCAAACAAAGTAGGTGCAGCAGAGATCATATCTAGGATTGTTGATGATCTGAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
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| CDS GCA 72 bp | ATCCTTCAGATCATCAACAATCCTAGATATGATCTCTaGTGCACCTACTTTGTTTGCCAACTCCACAGTTGT | + |
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Preference number: 6 (lower is better) Translates to: ILQIINNPRYDL*CTYFVCQLHSC Trigger: ACAACTGTGGAGTTGGCAAACAAAGTAGGTGCAGCAGAGATCATATCTAGGATTGTTGATGATCTGAAGGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
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| CDS CAA 72 bp | CTGTTCTTGGAAAGCATAGAGAATACCATCAATCAGTaGTTCCTCAAGTTTATGGTCAATATCTGCTGCGCC | + |
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Preference number: 6 (lower is better) Translates to: LFLESIENTINQ*FLKFMVNICCA Trigger: GGCGCAGCAGATATTGACCATAAACTTGAGGAACAACTGATTGATGGTATTCTCTATGCTTTCCAAGAACAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
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| CDS CAA 90 bp | TGTTGTACAATCTTAATACCAGTGTGCCTCGCTTGCCAAGACTTCTaGCTTTTGCACACAGCTTTTAAGAAAGGCAATAAAGAAGGGATG | + |
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Preference number: 6 (lower is better) Translates to: CCTILIPVCLACQDF*LLHTAFKKGNKEGM Trigger: CATCCCTTCTTTATTGCCTTTCTTAAAAGCTGTGTGCAAAAGCAAGAAGTCTTGGCAAGCGAGGCACACTGGTATTAAGATTGTACAACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
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| CDS CAA 72 bp | AGTCATCGTCATCATCTTCAAGTTCAGTTGCAGCAATaGATGTCACATATCCAGCAAATCTGCTATCACTTC | + |
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Preference number: 6 (lower is better) Translates to: SHRHHLQVQLQQ*MSHIQQICYHF Trigger: GAAGTGATAGCAGATTTGCTGGATATGTGACATCAATTGCTGCAACTGAACTTGAAGATGATGACGATGACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027127.14 ENSMUST00000191303.2 |
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| CDS CAA 72 bp | ATGATGAGTAGTCATCGTCATCATCTTCAAGTTCAGTaGCAGCAATTGATGTCACATATCCAGCAAATCTGC | + |
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Preference number: 6 (lower is better) Translates to: MMSSHRHHLQVQ*QQLMSHIQQIC Trigger: GCAGATTTGCTGGATATGTGACATCAATTGCTGCAACTGAACTTGAAGATGATGACGATGACTACTCATCAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027127.14 ENSMUST00000191303.2 |
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| CDS CAA 72 bp | ATCTTAATACCAGTGTGCCTCGCTTGCCAAGACTTCTaGCTTTTGCACACAGCTTTTAAGAAAGGCAATAAA | + |
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Preference number: 6 (lower is better) Translates to: ILIPVCLACQDF*LLHTAFKKGNK Trigger: TTTATTGCCTTTCTTAAAAGCTGTGTGCAAAAGCAAGAAGTCTTGGCAAGCGAGGCACACTGGTATTAAGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
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| CDS CAA 72 bp | TCAACAATCCTAGATATGATCTCTGCTGCACCTACTTaGTTTGCCAACTCCACAGTTGTATCAACTAACTGT | + |
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Preference number: 6 (lower is better) Translates to: STILDMISAAPT*FANSTVVSTNC Trigger: ACAGTTAGTTGATACAACTGTGGAGTTGGCAAACAAAGTAGGTGCAGCAGAGATCATATCTAGGATTGTTGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
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| CDS CAA 90 bp | ATGATGAGTAGTCATCGTCATCATCTTCAAGTTCAGTTGCAGCAATaGATGTCACATATCCAGCAAATCTGCTATCACTTCCACCATAAA | + |
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Preference number: 6 (lower is better) Translates to: MMSSHRHHLQVQLQQ*MSHIQQICYHFHHK Trigger: TTTATGGTGGAAGTGATAGCAGATTTGCTGGATATGTGACATCAATTGCTGCAACTGAACTTGAAGATGATGACGATGACTACTCATCAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027127.14 ENSMUST00000191303.2 |
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| CDS TCA 72 bp | ATTCTATCAATAACTTTCACAAGTAAATGTCGCTCTTaGTCCTCAAGTGTAGGGGACATCAACAGAGGAAGA | + |
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Preference number: 6 (lower is better) Translates to: ILSITFTSKCRS*SSSVGDINRGR Trigger: TCTTCCTCTGTTGATGTCCCCTACACTTGAGGATCAAGAGCGACATTTACTTGTGAAAGTTATTGATAGAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
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| CDS GCA 72 bp | CAGTTGCAGCAATTGATGTCACATATCCAGCAAATCTaGTATCACTTCCACCATAAATTTCTTGGTCATAAT | + |
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Preference number: 6 (lower is better) Translates to: QLQQLMSHIQQI*YHFHHKFLGHN Trigger: ATTATGACCAAGAAATTTATGGTGGAAGTGATAGCAGATTTGCTGGATATGTGACATCAATTGCTGCAACTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027127.14 ENSMUST00000191303.2 |
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| CDS GCA 72 bp | ATTTTCTCAATTGTTTCCATCACCATTTTCCTGTACTaGTCAGCTTCATCCTTCAGATCATCAACAATCCTA | + |
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Preference number: 6 (lower is better) Translates to: IFSIVSITIFLY*SASSFRSSTIL Trigger: TAGGATTGTTGATGATCTGAAGGATGAAGCTGAGCAGTACAGGAAAATGGTGATGGAAACAATTGAGAAAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
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| CDS CAA 72 bp | ATCAAGTCAGCTGCTTGTTGCCTAACTTTTGCTGATTaGTTATTTAAACGCCATAAAACTGTACCACAGATC | + |
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Preference number: 6 (lower is better) Translates to: IKSAACCLTFAD*LFKRHKTVPQI Trigger: GATCTGTGGTACAGTTTTATGGCGTTTAAATAACAAATCAGCAAAAGTTAGGCAACAAGCAGCTGACTTGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027127.14 |
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