Pregenerated sensors for SF3A2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020211Ensembl transcript IDs: ENSMUST00000147440.2, ENSMUST00000148665.8, ENSMUST00000151928.8
Found 60 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 72 bp | GGCAGGACAAATAGAAAACCTTCCAAGGACTGGCAATaGGAAAAGACCACACAGACAACAGAGGCTGGTGGG | + |
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Preference number: 3 (lower is better) Translates to: GRTNRKPSKDWQ*EKTTQTTEAGG Trigger: CCCACCAGCCTCTGTTGTCTGTGTGGTCTTTTCCCATTGCCAGTCCTTGGAAGGTTTTCTATTTGTCCTGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148665.8 |
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| 3UTR CCA 72 bp | GCTCAAGGCAGGACAAATAGAAAACCTTCCAAGGACTaGCAATGGGAAAAGACCACACAGACAACAGAGGCT | + |
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Preference number: 3 (lower is better) Translates to: AQGRTNRKPSKD*QWEKTTQTTEA Trigger: AGCCTCTGTTGTCTGTGTGGTCTTTTCCCATTGCCAGTCCTTGGAAGGTTTTCTATTTGTCCTGCCTTGAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148665.8 |
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| CDS-3UTR CCA 90 bp | CTTCCAAGGACTGGCAATGGGAAAAGACCACACAGACAACAGAGGCTGGTGGGGGGGCGGGGGCTTCTTTaGCCTCCTTGGCAGCTCGCC | + |
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Preference number: 4 (lower is better) Translates to: LPRTGNGKRPHRQQRLVGGRGLL*PPWQLA Trigger: GGCGAGCTGCCAAGGAGGCCAAAGAAGCCCCCGCCC...CCCCACCAGCCTCTGTTGTCTGTGTGGTCTTTTCCCATTGCCAGTCCTTGGAAG 61% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000148665.8 |
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| CDS-3UTR TCA 90 bp | CCTTCCAAGGACTGGCAATGGGAAAAGACCACACAGACAACAGAGGCTGGTGGGAGGGCTCAGCAGCCATaGGCAGGTACTGCCAGCGGC | + |
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Preference number: 4 (lower is better) Translates to: PSKDWQWEKTTQTTEAGGRAQQP*AGTASG Trigger: GCCGCTGGCAGTACCTGCTCATGGCTGCTGAGCCCT...CCCACCAGCCTCTGTTGTCTGTGTGGTCTTTTCCCATTGCCAGTCCTTGGAAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148665.8 |
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| CDS-3UTR CCA 90 bp | CTTCCAAGGACTGGCAATGGGAAAAGACCACACAGACAACAGAGGCTGGTGGGGTTCTCCGGTGCAGGCTaGGCGGGGGCTTCTTTGGCC | + |
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Preference number: 4 (lower is better) Translates to: LPRTGNGKRPHRQQRLVGFSGAG*AGASLA Trigger: GGCCAAAGAAGCCCCCGCCCAGCCTGCACCGGAGAA...CCCCACCAGCCTCTGTTGTCTGTGTGGTCTTTTCCCATTGCCAGTCCTTGGAAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000148665.8 |
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| CDS-3UTR CCA 90 bp | CTTCCAAGGACTGGCAATGGGAAAAGACCACACAGACAACAGAGGCTGGTGGGGGACACCTGGAGCTGGTaGGTGCACTCCTGGGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LPRTGNGKRPHRQQRLVGDTWSW*VHSWGW Trigger: CCAGCCCCAGGAGTGCACCCACCAGCTCCAGGTGTC...CCCCACCAGCCTCTGTTGTCTGTGTGGTCTTTTCCCATTGCCAGTCCTTGGAAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000148665.8 |
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| CDS-3UTR CCA 90 bp | TTCCAAGGACTGGCAATGGGAAAAGACCACACAGACAACAGAGGCTGGTGGGGGCAAGGCATCAGGGAGTaGTGGGCGAGGAGGCAGTCC | + |
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Preference number: 4 (lower is better) Translates to: FQGLAMGKDHTDNRGWWGQGIRE*WARRQS Trigger: GGACTGCCTCCTCGCCCACCACTCCCTGATGCCTTG...CCCCCACCAGCCTCTGTTGTCTGTGTGGTCTTTTCCCATTGCCAGTCCTTGGAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000148665.8 |
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| CDS-3UTR GCA 90 bp | CCTTCCAAGGACTGGCAATGGGAAAAGACCACACAGACAACAGAGGCTGGTGGGTGGGAGGCTGGGAGGTaGTGGGGGCTTCTCCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: PSKDWQWEKTTQTTEAGGWEAGR*WGLLHL Trigger: AAGATGGAGAAGCCCCCAGCACCTCCCAGCCTCCCA...CCCACCAGCCTCTGTTGTCTGTGTGGTCTTTTCCCATTGCCAGTCCTTGGAAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000148665.8 |
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| CDS-3UTR CCA 90 bp | GAAAACCTTCCAAGGACTGGCAATGGGAAAAGACCACACAGACAACAGAGGCTGGGTGCACTCCAGGGGTaGGTGGGTGCACTCCAGGGG | + |
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Preference number: 4 (lower is better) Translates to: ENLPRTGNGKRPHRQQRLGALQG*VGALQG Trigger: CCCCTGGAGTGCACCCACCCACCCCTGGAGTGCACC...CAGCCTCTGTTGTCTGTGTGGTCTTTTCCCATTGCCAGTCCTTGGAAGGTTTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000148665.8 |
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| CDS-3UTR GCA 90 bp | CTTCCAAGGACTGGCAATGGGAAAAGACCACACAGACAACAGAGGCTGGTGGGGGGCTTGAGGGTGTACTaGAGGAGCAGGTGGGTGTAC | + |
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Preference number: 4 (lower is better) Translates to: LPRTGNGKRPHRQQRLVGGLRVY*RSRWVY Trigger: GTACACCCACCTGCTCCTGCAGTACACCCTCAAGCC...CCCCACCAGCCTCTGTTGTCTGTGTGGTCTTTTCCCATTGCCAGTCCTTGGAAG 57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000148665.8 |
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| CDS-3UTR CCA 90 bp | CTTCCAAGGACTGGCAATGGGAAAAGACCACACAGACAACAGAGGCTGGTGGGGAACAGCAGGCTCTGCTaGCCCATCTCTGTGTCCCTC | + |
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Preference number: 4 (lower is better) Translates to: LPRTGNGKRPHRQQRLVGNSRLC*PISVSL Trigger: GAGGGACACAGAGATGGGCCAGCAGAGCCTGCTGTT...CCCCACCAGCCTCTGTTGTCTGTGTGGTCTTTTCCCATTGCCAGTCCTTGGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148665.8 |
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| CDS-3UTR TCA 90 bp | CTTCCAAGGACTGGCAATGGGAAAAGACCACACAGACAACAGAGGCTGGTGGGGCCCGGCTTGGCACCTTaGAAGCAATGGTCTCATAGG | + |
|
Preference number: 4 (lower is better) Translates to: LPRTGNGKRPHRQQRLVGPGLAP*KQWSHR Trigger: CCTATGAGACCATTGCTTTCAAGGTGCCAAGCCGGG...CCCCACCAGCCTCTGTTGTCTGTGTGGTCTTTTCCCATTGCCAGTCCTTGGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148665.8 |
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| CDS-3UTR TCA 90 bp | AGGCTCAAGGCAGGACAAATAGAAAACCTTCCAAGGACTGGCAATGGGAAAAGAGAGGCAGTCCATTCATaGGTGGGGGCGGGGGCCGCT | + |
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Preference number: 4 (lower is better) Translates to: RLKAGQIENLPRTGNGKREAVHS*VGAGAA Trigger: AGCGGCCCCCGCCCCCACTCATGAATGGACTGCCTC...TCTTTTCCCATTGCCAGTCCTTGGAAGGTTTTCTATTTGTCCTGCCTTGAGCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000148665.8 |
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| CDS-3UTR GCA 90 bp | AGGACAAATAGAAAACCTTCCAAGGACTGGCAATGGGAAAAGACCACACAGACAGACGCCTGGGGGTCCTaGTGGGAGGCTGGGAGGTGC | + |
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Preference number: 4 (lower is better) Translates to: RTNRKPSKDWQWEKTTQTDAWGS*WEAGRC Trigger: GCACCTCCCAGCCTCCCAGCAGGACCCCCAGGCGTC...TGTCTGTGTGGTCTTTTCCCATTGCCAGTCCTTGGAAGGTTTTCTATTTGTCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000148665.8 |
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| CDS-3UTR CCA 90 bp | GCTCAAGGCAGGACAAATAGAAAACCTTCCAAGGACTGGCAATGGGAAAAGACCCTGCCAGCGGCGGTCTaGAGGCTCGATCCTCTGCTC | + |
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Preference number: 4 (lower is better) Translates to: AQGRTNRKPSKDWQWEKTLPAAV*RLDPLL Trigger: GAGCAGAGGATCGAGCCTCCAGACCGCCGCTGGCAG...GGTCTTTTCCCATTGCCAGTCCTTGGAAGGTTTTCTATTTGTCCTGCCTTGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148665.8 |
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| CDS-3UTR CCA 90 bp | GAAAACCTTCCAAGGACTGGCAATGGGAAAAGACCACACAGACAACAGAGGCTGCTTCTTTGGCCTCCTTaGCAGCTCGCCGGGCCAAGT | + |
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Preference number: 4 (lower is better) Translates to: ENLPRTGNGKRPHRQQRLLLWPP*QLAGPS Trigger: ACTTGGCCCGGCGAGCTGCCAAGGAGGCCAAAGAAG...CAGCCTCTGTTGTCTGTGTGGTCTTTTCCCATTGCCAGTCCTTGGAAGGTTTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148665.8 |
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| CDS-3UTR CCA 90 bp | CCTTCCAAGGACTGGCAATGGGAAAAGACCACACAGACAACAGAGGCTGGTGGGGCAGACATGAAACGGTaGCGTGGCATGATACCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: PSKDWQWEKTTQTTEAGGADMKR*RGMIPS Trigger: AGAGGGTATCATGCCACGCCACCGTTTCATGTCTGC...CCCACCAGCCTCTGTTGTCTGTGTGGTCTTTTCCCATTGCCAGTCCTTGGAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148665.8 |
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| CDS-3UTR TCA 90 bp | GAAAACCTTCCAAGGACTGGCAATGGGAAAAGACCACACAGACAACAGAGGCTGTCTTCACCTCCACCTTaGCCTTCTCCGGTGCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: ENLPRTGNGKRPHRQQRLSSPPP*PSPVQA Trigger: AGCCTGCACCGGAGAAGGTCAAGGTGGAGGTGAAGA...CAGCCTCTGTTGTCTGTGTGGTCTTTTCCCATTGCCAGTCCTTGGAAGGTTTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148665.8 |
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| CDS-3UTR GCA 90 bp | AATAGAAAACCTTCCAAGGACTGGCAATGGGAAAAGACCACACAGACAACAGAGGCCATGAGCAGGTACTaGCAGCGGCGGTCTGGAGGC | + |
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Preference number: 4 (lower is better) Translates to: NRKPSKDWQWEKTTQTTEAMSRY*QRRSGG Trigger: GCCTCCAGACCGCCGCTGGCAGTACCTGCTCATGGC...CTCTGTTGTCTGTGTGGTCTTTTCCCATTGCCAGTCCTTGGAAGGTTTTCTATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148665.8 |
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| CDS-3UTR GCA 90 bp | AGAAAACCTTCCAAGGACTGGCAATGGGAAAAGACCACACAGACAACAGAGGCTGGCATAGGAGCAGGGTaGACCCCAGGATTTGAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: RKPSKDWQWEKTTQTTEAGIGAG*TPGFEG Trigger: CCCCTCAAATCCTGGGGTGCACCCTGCTCCTATGCC...AGCCTCTGTTGTCTGTGTGGTCTTTTCCCATTGCCAGTCCTTGGAAGGTTTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000148665.8 |
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| CDS-3UTR CCA 90 bp | AGGACAAATAGAAAACCTTCCAAGGACTGGCAATGGGAAAAGACCACACAGACAGCCACCAGGTGGAGGTaGGGGCAAGGCATCAGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: RTNRKPSKDWQWEKTTQTATRWR*GQGIRE Trigger: CTCCCTGATGCCTTGCCCCCACCTCCACCTGGTGGC...TGTCTGTGTGGTCTTTTCCCATTGCCAGTCCTTGGAAGGTTTTCTATTTGTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000148665.8 |
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| CDS-3UTR CCA 90 bp | AGAAAACCTTCCAAGGACTGGCAATGGGAAAAGACCACACAGACAACAGAGGCTTACTGCAGGAGCAGGTaGGTGTACCCCTGGAGCCTG | + |
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Preference number: 4 (lower is better) Translates to: RKPSKDWQWEKTTQTTEAYCRSR*VYPWSL Trigger: CAGGCTCCAGGGGTACACCCACCTGCTCCTGCAGTA...AGCCTCTGTTGTCTGTGTGGTCTTTTCCCATTGCCAGTCCTTGGAAGGTTTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000148665.8 |
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| CDS-3UTR TCA 90 bp | AGAAAACCTTCCAAGGACTGGCAATGGGAAAAGACCACACAGACAACAGAGGCTAGGATGAACTCCAGCTaGTGGAGGAGGGTGTACCCC | + |
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Preference number: 4 (lower is better) Translates to: RKPSKDWQWEKTTQTTEARMNSS*WRRVYP Trigger: GGGGTACACCCTCCTCCATCAGCTGGAGTTCATCCT...AGCCTCTGTTGTCTGTGTGGTCTTTTCCCATTGCCAGTCCTTGGAAGGTTTTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148665.8 |
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| CDS-3UTR GCA 90 bp | AATAGAAAACCTTCCAAGGACTGGCAATGGGAAAAGACCACACAGACAACAGAGAGGGTGAACCCCTGGTaGCTGAGGGTGGATCCCAGG | + |
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Preference number: 4 (lower is better) Translates to: NRKPSKDWQWEKTTQTTERVNPW*LRVDPR Trigger: CCTGGGATCCACCCTCAGGCACCAGGGGTTCACCCT...CTCTGTTGTCTGTGTGGTCTTTTCCCATTGCCAGTCCTTGGAAGGTTTTCTATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000148665.8 |
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| CDS-3UTR CCA 90 bp | GAAAACCTTCCAAGGACTGGCAATGGGAAAAGACCACACAGACAACAGAGGCTGCTGTGTCCCTCTGCTTaGTCACTTTGTACCCAGGGC | + |
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Preference number: 4 (lower is better) Translates to: ENLPRTGNGKRPHRQQRLLCPSA*SLCTQG Trigger: GCCCTGGGTACAAAGTGACCAAGCAGAGGGACACAG...CAGCCTCTGTTGTCTGTGTGGTCTTTTCCCATTGCCAGTCCTTGGAAGGTTTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148665.8 |
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| CDS-3UTR CCA 90 bp | ACAAATAGAAAACCTTCCAAGGACTGGCAATGGGAAAAGACCACACAGACAACAGTCCTGCTGGGAGGCTaGGAGGTGCTGGGGGCTTCT | + |
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Preference number: 4 (lower is better) Translates to: TNRKPSKDWQWEKTTQTTVLLGG*EVLGAS Trigger: AGAAGCCCCCAGCACCTCCCAGCCTCCCAGCAGGAC...TGTTGTCTGTGTGGTCTTTTCCCATTGCCAGTCCTTGGAAGGTTTTCTATTTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000148665.8 |
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| CDS-3UTR CCA 90 bp | ACAAATAGAAAACCTTCCAAGGACTGGCAATGGGAAAAGACCACACAGACAACAGTGTACCCCTGGAGCTaGTGGGTGCACCCCTGGAGC | + |
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Preference number: 4 (lower is better) Translates to: TNRKPSKDWQWEKTTQTTVYPWS*WVHPWS Trigger: GCTCCAGGGGTGCACCCACCAGCTCCAGGGGTACAC...TGTTGTCTGTGTGGTCTTTTCCCATTGCCAGTCCTTGGAAGGTTTTCTATTTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000148665.8 |
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| CDS-3UTR GCA 90 bp | CAAGGCAGGACAAATAGAAAACCTTCCAAGGACTGGCAATGGGAAAAGACCACATGGAACAGCAGGCTCTaGTGGCCCATCTCTGTGTCC | + |
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Preference number: 4 (lower is better) Translates to: QGRTNRKPSKDWQWEKTTWNSRL*WPISVS Trigger: GGACACAGAGATGGGCCAGCAGAGCCTGCTGTTCCA...TGTGGTCTTTTCCCATTGCCAGTCCTTGGAAGGTTTTCTATTTGTCCTGCCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148665.8 |
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| CDS-3UTR TCA 90 bp | GAAAACCTTCCAAGGACTGGCAATGGGAAAAGACCACACAGACAACAGAGGCTGCGGGCCAAGTTAGTCTaGTGTTTCTTCCCTTGGGTA | + |
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Preference number: 4 (lower is better) Translates to: ENLPRTGNGKRPHRQQRLRAKLV*CFFPWV Trigger: TACCCAAGGGAAGAAACATCAGACTAACTTGGCCCG...CAGCCTCTGTTGTCTGTGTGGTCTTTTCCCATTGCCAGTCCTTGGAAGGTTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148665.8 |
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| CDS-3UTR CCA 90 bp | AGGACAAATAGAAAACCTTCCAAGGACTGGCAATGGGAAAAGACCACACAGACAGTGTACCCCAGGAGCTaGGGGATGGACTCCAGATGT | + |
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Preference number: 4 (lower is better) Translates to: RTNRKPSKDWQWEKTTQTVYPRS*GMDSRC Trigger: ACATCTGGAGTCCATCCCCCAGCTCCTGGGGTACAC...TGTCTGTGTGGTCTTTTCCCATTGCCAGTCCTTGGAAGGTTTTCTATTTGTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000148665.8 |
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| CDS-3UTR CCA 90 bp | ACAAATAGAAAACCTTCCAAGGACTGGCAATGGGAAAAGACCACACAGACAACAAGGTGGGTGTACCCCTaGAGCCTGAGGATGAACTCC | + |
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Preference number: 4 (lower is better) Translates to: TNRKPSKDWQWEKTTQTTRWVYP*SLRMNS Trigger: GGAGTTCATCCTCAGGCTCCAGGGGTACACCCACCT...TGTTGTCTGTGTGGTCTTTTCCCATTGCCAGTCCTTGGAAGGTTTTCTATTTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000148665.8 |
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| CDS-3UTR TCA 90 bp | AGAAAACCTTCCAAGGACTGGCAATGGGAAAAGACCACACAGACAACAGAGGCTAATACGGGTCCTTGTTaGTGTCAATGGTTTCCAGGG | + |
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Preference number: 4 (lower is better) Translates to: RKPSKDWQWEKTTQTTEANTGPC*CQWFPG Trigger: CCCTGGAAACCATTGACATCAACAAGGACCCGTATT...AGCCTCTGTTGTCTGTGTGGTCTTTTCCCATTGCCAGTCCTTGGAAGGTTTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148665.8 |
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| CDS-3UTR GCA 90 bp | GCTCAAGGCAGGACAAATAGAAAACCTTCCAAGGACTGGCAATGGGAAAAGACCTGGCATGATACCCTCTaGGATCTCAGGGTAGTCAAT | + |
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Preference number: 4 (lower is better) Translates to: AQGRTNRKPSKDWQWEKTWHDTL*DLRVVN Trigger: ATTGACTACCCTGAGATCGCAGAGGGTATCATGCCA...GGTCTTTTCCCATTGCCAGTCCTTGGAAGGTTTTCTATTTGTCCTGCCTTGAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148665.8 |
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| CDS-3UTR GCA 90 bp | GCTCAAGGCAGGACAAATAGAAAACCTTCCAAGGACTGGCAATGGGAAAAGACCAGTGGGTCCAAAACTTaGCCTCAGCCTTGTCAATCT | + |
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Preference number: 4 (lower is better) Translates to: AQGRTNRKPSKDWQWEKTSGSKT*PQPCQS Trigger: AGATTGACAAGGCTGAGGGCAAGTTTTGGACCCACT...GGTCTTTTCCCATTGCCAGTCCTTGGAAGGTTTTCTATTTGTCCTGCCTTGAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000148665.8 |
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| CDS-3UTR GCA 90 bp | CAAGGCAGGACAAATAGAAAACCTTCCAAGGACTGGCAATGGGAAAAGACCACAGAGTCAGGCAGAGTTTaGACTCATAGGATCCCAAGT | + |
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Preference number: 4 (lower is better) Translates to: QGRTNRKPSKDWQWEKTTESGRV*THRIPS Trigger: ACTTGGGATCCTATGAGTGCAAACTCTGCCTGACTC...TGTGGTCTTTTCCCATTGCCAGTCCTTGGAAGGTTTTCTATTTGTCCTGCCTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148665.8 |
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| CDS-3UTR GCA 90 bp | AGGCTCAAGGCAGGACAAATAGAAAACCTTCCAAGGACTGGCAATGGGAAAAGACTCCCCTCATTGTTATaGAGAGTCAGGCAGAGTTTG | + |
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Preference number: 4 (lower is better) Translates to: RLKAGQIENLPRTGNGKRLPSLL*RVRQSL Trigger: CAAACTCTGCCTGACTCTGCATAACAATGAGGGGAG...TCTTTTCCCATTGCCAGTCCTTGGAAGGTTTTCTATTTGTCCTGCCTTGAGCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000148665.8 |
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| CDS-3UTR CCA 90 bp | CAAGGCAGGACAAATAGAAAACCTTCCAAGGACTGGCAATGGGAAAAGACCACAGTTTCTCTGTTCCAGTaGGTCCAAAACTTGCCCTCA | + |
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Preference number: 4 (lower is better) Translates to: QGRTNRKPSKDWQWEKTTVSLFQ*VQNLPS Trigger: TGAGGGCAAGTTTTGGACCCACTGGAACAGAGAAAC...TGTGGTCTTTTCCCATTGCCAGTCCTTGGAAGGTTTTCTATTTGTCCTGCCTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000148665.8 |
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| CDS GCA 90 bp | GCCAATCTTCACAAACTTCTTCACCTCCACCTTGACCTTCTCCGGTaGAGGCTGGGCGGGGGCTTCTTTGGCCTCCTTGGCAGCTCGCCG | + |
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Preference number: 5 (lower is better) Translates to: ANLHKLLHLHLDLLR*RLGGGFFGLLGSSP Trigger: CGGCGAGCTGCCAAGGAGGCCAAAGAAGCCCCCGCCCAGCCTGCACCGGAGAAGGTCAAGGTGGAGGTGAAGAAGTTTGTGAAGATTGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000148665.8 ENSMUST00000151928.8 |
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| CDS TCA 90 bp | TGTACCCAGGGCGGCCAATCTTCACAAACTTCTTCACCTCCACCTTaGCCTTCTCCGGTGCAGGCTGGGCGGGGGCTTCTTTGGCCTCCT | + |
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Preference number: 5 (lower is better) Translates to: CTQGGQSSQTSSPPP*PSPVQAGRGLLWPP Trigger: AGGAGGCCAAAGAAGCCCCCGCCCAGCCTGCACCGGAGAAGGTCAAGGTGGAGGTGAAGAAGTTTGTGAAGATTGGCCGCCCTGGGTACA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000148665.8 ENSMUST00000151928.8 |
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| CDS-3UTR CAA 90 bp | CCTTCCAAGGACTGGCAATGGGAAAAGACCACACAGACAACAGAGGCTGGTGGGTTCTTCACCTCCACCTaGACCTTCTCCGGTGCAGGC | + |
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Preference number: 5 (lower is better) Translates to: PSKDWQWEKTTQTTEAGGFFTST*TFSGAG Trigger: GCCTGCACCGGAGAAGGTCAAGGTGGAGGTGAAGAA...CCCACCAGCCTCTGTTGTCTGTGTGGTCTTTTCCCATTGCCAGTCCTTGGAAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148665.8 |
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| CDS-3UTR CAA 90 bp | CTTCCAAGGACTGGCAATGGGAAAAGACCACACAGACAACAGAGGCTGGTGGGGGATGGACCCCAGATGTaGGTGGATGGACCACTGGTG | + |
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Preference number: 5 (lower is better) Translates to: LPRTGNGKRPHRQQRLVGDGPQM*VDGPLV Trigger: CACCAGTGGTCCATCCACCAACATCTGGGGTCCATC...CCCCACCAGCCTCTGTTGTCTGTGTGGTCTTTTCCCATTGCCAGTCCTTGGAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000148665.8 |
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| CDS-3UTR CAA 90 bp | GCTCAAGGCAGGACAAATAGAAAACCTTCCAAGGACTGGCAATGGGAAAAGACCGCTTCTTTGGCCTCCTaGGCAGCTCGCCGGGCCAAG | + |
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Preference number: 5 (lower is better) Translates to: AQGRTNRKPSKDWQWEKTASLAS*AARRAK Trigger: CTTGGCCCGGCGAGCTGCCAAGGAGGCCAAAGAAGC...GGTCTTTTCCCATTGCCAGTCCTTGGAAGGTTTTCTATTTGTCCTGCCTTGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148665.8 |
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| CDS-3UTR CAA 90 bp | ACAAATAGAAAACCTTCCAAGGACTGGCAATGGGAAAAGACCACACAGACAACATGGGCGGGGGCTTCTTaGGCCTCCTTGGCAGCTCGC | + |
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Preference number: 5 (lower is better) Translates to: TNRKPSKDWQWEKTTQTTWAGAS*ASLAAR Trigger: GCGAGCTGCCAAGGAGGCCAAAGAAGCCCCCGCCCA...TGTTGTCTGTGTGGTCTTTTCCCATTGCCAGTCCTTGGAAGGTTTTCTATTTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000148665.8 |
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| CDS-3UTR CAA 90 bp | AATAGAAAACCTTCCAAGGACTGGCAATGGGAAAAGACCACACAGACAACAGAGGTGTACCCCAGGGGCTaGAGGGTGTACTGCAGGAGC | + |
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Preference number: 5 (lower is better) Translates to: NRKPSKDWQWEKTTQTTEVYPRG*RVYCRS Trigger: GCTCCTGCAGTACACCCTCAAGCCCCTGGGGTACAC...CTCTGTTGTCTGTGTGGTCTTTTCCCATTGCCAGTCCTTGGAAGGTTTTCTATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000148665.8 |
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| CDS-3UTR CAA 90 bp | CTTCCAAGGACTGGCAATGGGAAAAGACCACACAGACAACAGAGGCTGGTGGGGAAATACGGGTCCTTGTaGATGTCAATGGTTTCCAGG | + |
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Preference number: 5 (lower is better) Translates to: LPRTGNGKRPHRQQRLVGKYGSL*MSMVSR Trigger: CCTGGAAACCATTGACATCAACAAGGACCCGTATTT...CCCCACCAGCCTCTGTTGTCTGTGTGGTCTTTTCCCATTGCCAGTCCTTGGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148665.8 |
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| CDS-3UTR CAA 90 bp | ACAAATAGAAAACCTTCCAAGGACTGGCAATGGGAAAAGACCACACAGACAACATCTCTCCGATCCCGGTaGCTCTCAGAGGAGGAGGCT | + |
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Preference number: 5 (lower is better) Translates to: TNRKPSKDWQWEKTTQTTSLRSR*LSEEEA Trigger: AGCCTCCTCCTCTGAGAGCAACCGGGATCGGAGAGA...TGTTGTCTGTGTGGTCTTTTCCCATTGCCAGTCCTTGGAAGGTTTTCTATTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148665.8 |
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| CDS-3UTR CAA 90 bp | AATAGAAAACCTTCCAAGGACTGGCAATGGGAAAAGACCACACAGACAACAGAGAACTTGCCCTCAGCCTaGTCAATCTCCCGGCTTGGC | + |
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Preference number: 5 (lower is better) Translates to: NRKPSKDWQWEKTTQTTENLPSA*SISRLG Trigger: GCCAAGCCGGGAGATTGACAAGGCTGAGGGCAAGTT...CTCTGTTGTCTGTGTGGTCTTTTCCCATTGCCAGTCCTTGGAAGGTTTTCTATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148665.8 |
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| CDS-3UTR CAA 90 bp | AATAGAAAACCTTCCAAGGACTGGCAATGGGAAAAGACCACACAGACAACAGAGTCTGTGTCCCTCTGCTaGGTCACTTTGTACCCAGGG | + |
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Preference number: 5 (lower is better) Translates to: NRKPSKDWQWEKTTQTTESVSLC*VTLYPG Trigger: CCCTGGGTACAAAGTGACCAAGCAGAGGGACACAGA...CTCTGTTGTCTGTGTGGTCTTTTCCCATTGCCAGTCCTTGGAAGGTTTTCTATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148665.8 |
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| CDS GCA 72 bp | GGGCCAATTGGCGCAGACGCTCTCTCCGATCCCGGTTaGTCTCAGAGGAGGAGGCTACGCCCCCACTCCCAG | + |
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Preference number: 6 (lower is better) Translates to: GPIGADALSDPG*SQRRRLRPHSQ Trigger: CTGGGAGTGGGGGCGTAGCCTCCTCCTCTGAGAGCAACCGGGATCGGAGAGAGCGTCTGCGCCAATTGGCCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000147440.2 ENSMUST00000148665.8 ENSMUST00000151928.8 |
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| CDS CCA 72 bp | ACCAGGTGGAGGTGGGGGCAAGGCATCAGGGAGTGGTaGGCGAGGAGGCAGTCCATTCATGAGTGGGGGCGG | + |
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Preference number: 6 (lower is better) Translates to: TRWRWGQGIREW*ARRQSIHEWGR Trigger: CCGCCCCCACTCATGAATGGACTGCCTCCTCGCCCACCACTCCCTGATGCCTTGCCCCCACCTCCACCTGGT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000148665.8 |
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| CDS CAA 72 bp | AGGGCCAATTGGCGCAGACGCTCTCTCCGATCCCGGTaGCTCTCAGAGGAGGAGGCTACGCCCCCACTCCCA | + |
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Preference number: 6 (lower is better) Translates to: RANWRRRSLRSR*LSEEEATPPLP Trigger: TGGGAGTGGGGGCGTAGCCTCCTCCTCTGAGAGCAACCGGGATCGGAGAGAGCGTCTGCGCCAATTGGCCCT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000147440.2 ENSMUST00000148665.8 ENSMUST00000151928.8 |
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| CDS CCA 72 bp | TTCTTCACCTCCACCTTGACCTTCTCCGGTGCAGGCTaGGCGGGGGCTTCTTTGGCCTCCTTGGCAGCTCGC | + |
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Preference number: 6 (lower is better) Translates to: FFTSTLTFSGAG*AGASLASLAAR Trigger: GCGAGCTGCCAAGGAGGCCAAAGAAGCCCCCGCCCAGCCTGCACCGGAGAAGGTCAAGGTGGAGGTGAAGAA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000148665.8 ENSMUST00000151928.8 |
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| CDS GCA 72 bp | CACAAACTTCTTCACCTCCACCTTGACCTTCTCCGGTaGAGGCTGGGCGGGGGCTTCTTTGGCCTCCTTGGC | + |
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Preference number: 6 (lower is better) Translates to: HKLLHLHLDLLR*RLGGGFFGLLG Trigger: GCCAAGGAGGCCAAAGAAGCCCCCGCCCAGCCTGCACCGGAGAAGGTCAAGGTGGAGGTGAAGAAGTTTGTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000148665.8 ENSMUST00000151928.8 |
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| CDS CAA 72 bp | GGGCGGCCAATCTTCACAAACTTCTTCACCTCCACCTaGACCTTCTCCGGTGCAGGCTGGGCGGGGGCTTCT | + |
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Preference number: 6 (lower is better) Translates to: GRPIFTNFFTST*TFSGAGWAGAS Trigger: AGAAGCCCCCGCCCAGCCTGCACCGGAGAAGGTCAAGGTGGAGGTGAAGAAGTTTGTGAAGATTGGCCGCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000148665.8 ENSMUST00000151928.8 |
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| CDS CAA 90 bp | TTGTACCCAGGGCGGCCAATCTTCACAAACTTCTTCACCTCCACCTaGACCTTCTCCGGTGCAGGCTGGGCGGGGGCTTCTTTGGCCTCC | + |
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Preference number: 6 (lower is better) Translates to: LYPGRPIFTNFFTST*TFSGAGWAGASLAS Trigger: GGAGGCCAAAGAAGCCCCCGCCCAGCCTGCACCGGAGAAGGTCAAGGTGGAGGTGAAGAAGTTTGTGAAGATTGGCCGCCCTGGGTACAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000148665.8 ENSMUST00000151928.8 |
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| CDS TCA 72 bp | GGCGGCCAATCTTCACAAACTTCTTCACCTCCACCTTaGCCTTCTCCGGTGCAGGCTGGGCGGGGGCTTCTT | + |
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Preference number: 6 (lower is better) Translates to: GGQSSQTSSPPP*PSPVQAGRGLL Trigger: AAGAAGCCCCCGCCCAGCCTGCACCGGAGAAGGTCAAGGTGGAGGTGAAGAAGTTTGTGAAGATTGGCCGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000148665.8 ENSMUST00000151928.8 |
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| CDS CAA 72 bp | CGGGTCCTTGTTGATGTCAATGGTTTCCAGGGCCAATaGGCGCAGACGCTCTCTCCGATCCCGGTTGCTCTC | + |
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Preference number: 6 (lower is better) Translates to: RVLVDVNGFQGQ*AQTLSPIPVAL Trigger: GAGAGCAACCGGGATCGGAGAGAGCGTCTGCGCCAATTGGCCCTGGAAACCATTGACATCAACAAGGACCCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000147440.2 ENSMUST00000148665.8 ENSMUST00000151928.8 |
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| CDS CAA 90 bp | CTCCTTGGCAGCTCGCCGGGCCAAGTTAGTCTGATGTTTCTTCCCTaGGGTATGGGCCAGGTAGCTCCCCTCATTGTTATGCAGAGTCAG | + |
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Preference number: 6 (lower is better) Translates to: LLGSSPGQVSLMFLP*GMGQVAPLIVMQSQ Trigger: CTGACTCTGCATAACAATGAGGGGAGCTACCTGGCCCATACCCAAGGGAAGAAACATCAGACTAACTTGGCCCGGCGAGCTGCCAAGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000148665.8 ENSMUST00000151928.8 |
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| CDS GCA 72 bp | ACTGCTTGGTTTCTCTGTTCCAGTGGGTCCAAAACTTaGCCTCAGCCTTGTCAATCTCCCGGCTTGGCACCT | + |
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Preference number: 6 (lower is better) Translates to: TAWFLCSSGSKT*PQPCQSPGLAP Trigger: AGGTGCCAAGCCGGGAGATTGACAAGGCTGAGGGCAAGTTTTGGACCCACTGGAACAGAGAAACCAAGCAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148665.8 |
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| CDS CAA 72 bp | GATCCCAAGTGGTTCTTCATAAAATACGGGTCCTTGTaGATGTCAATGGTTTCCAGGGCCAATTGGCGCAGA | + |
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Preference number: 6 (lower is better) Translates to: DPKWFFIKYGSL*MSMVSRANWRR Trigger: TCTGCGCCAATTGGCCCTGGAAACCATTGACATCAACAAGGACCCGTATTTTATGAAGAACCACTTGGGATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000147440.2 ENSMUST00000148665.8 ENSMUST00000151928.8 |
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