Pregenerated sensors for SF3A1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000002129Ensembl transcript IDs: ENSMUST00000002198.4
Found 255 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR TCA 90 bp | TCACCCTTGCCTTCCAGGTCTTTCTCATTCACTGGCCTGCTAGGATaGCTCTGCCTGTCTTGTCTCCTAGTGCACAGGGTAGCAGTGGCT | + |
Preference number: 1 (lower is better) Translates to: SPLPSRSFSFTGLLG*LCLSCLLVHRVAVA Trigger: AGCCACTGCTACCCTGTGCACTAGGAGACAAGACAGGCAGAGTCATCCTAGCAGGCCAGTGAATGAGAAAGACCTGGAAGGCAAGGGTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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3UTR CCA 90 bp | GGGAAACAAATGCCCAGGCTGTGCCTGAGGCCCCAGGGACACTCCTaGAATTGGTGGTGCAAAGAGGTACAATGGCAAGGTTTCAATTGC | + |
Preference number: 1 (lower is better) Translates to: GKQMPRLCLRPQGHS*NWWCKEVQWQGFNC Trigger: GCAATTGAAACCTTGCCATTGTACCTCTTTGCACCACCAATTCCAGGAGTGTCCCTGGGGCCTCAGGCACAGCCTGGGCATTTGTTTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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3UTR CCA 90 bp | GACTTCCTGATGCTCCTCCCATACAACAGTACCCCCTCCTCCTCCTaGAAATCCCTCCAGGGGATTTCTGGTGCTACCCAACTAGTCTCT | + |
Preference number: 1 (lower is better) Translates to: DFLMLLPYNSTPSSS*KSLQGISGATQLVS Trigger: AGAGACTAGTTGGGTAGCACCAGAAATCCCCTGGAGGGATTTCCAGGAGGAGGAGGGGGTACTGTTGTATGGGAGGAGCATCAGGAAGTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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3UTR TCA 90 bp | CAATGTGTAATGGAGCCAAGTGACTGGTGCTGTAGAGGCCTCGGCTaGGAAAGGAAAAGGTGGAGGGGCTGGGAGTTAGAATACTGCTTC | + |
Preference number: 1 (lower is better) Translates to: QCVMEPSDWCCRGLG*ERKRWRGWELEYCF Trigger: GAAGCAGTATTCTAACTCCCAGCCCCTCCACCTTTTCCTTTCTCAGCCGAGGCCTCTACAGCACCAGTCACTTGGCTCCATTACACATTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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3UTR CCA 90 bp | TGGATCAAAGGGCCCATTCACTTGCATTCTACCCAGTCACATTCTTaGTCTCATGTCACAGCCTCAGCCATAGAGGCACTGTGGGGTTTG | + |
Preference number: 1 (lower is better) Translates to: WIKGPIHLHSTQSHS*SHVTASAIEALWGL Trigger: CAAACCCCACAGTGCCTCTATGGCTGAGGCTGTGACATGAGACCAAGAATGTGACTGGGTAGAATGCAAGTGAATGGGCCCTTTGATCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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3UTR TCA 90 bp | TCCAATCCAGAATTGAAACAAGATATTCATTCCGTAGACTGGCTTTaGGGGAAACAAATGCCCAGGCTGTGCCTGAGGCCCCAGGGACAC | + |
Preference number: 1 (lower is better) Translates to: SNPELKQDIHSVDWL*GKQMPRLCLRPQGH Trigger: GTGTCCCTGGGGCCTCAGGCACAGCCTGGGCATTTGTTTCCCTCAAAGCCAGTCTACGGAATGAATATCTTGTTTCAATTCTGGATTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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3UTR TCA 90 bp | CACACAGCCCAGTCTGGCCTCAAGCTATACAGCCGAGGTGAACATTaGACATTTAATTCTTCTGCCCACACATCCCAAGTCCCAGGATCA | + |
Preference number: 1 (lower is better) Translates to: HTAQSGLKLYSRGEH*TFNSSAHTSQVPGS Trigger: TGATCCTGGGACTTGGGATGTGTGGGCAGAAGAATTAAATGTTCAATGTTCACCTCGGCTGTATAGCTTGAGGCCAGACTGGGCTGTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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3UTR TCA 90 bp | CTTTGTTTACAGCTTATCAACACACTCTCCACTCTCCCCTCCCTCTaGATACACACAGCAACACCACCCATGCCTCCACAAGACCACAAC | + |
Preference number: 1 (lower is better) Translates to: LCLQLINTLSTLPSL*IHTATPPMPPQDHN Trigger: GTTGTGGTCTTGTGGAGGCATGGGTGGTGTTGCTGTGTGTATTCAGAGGGAGGGGAGAGTGGAGAGTGTGTTGATAAGCTGTAAACAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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3UTR TCA 90 bp | GTGGAGGGGCTGGGAGTTAGAATACTGCTTCTGGACTGGGAACTCTaGAGCTTTCAGCACATGCAGTCCTCCAAAAAGAAACCAGCTTTG | + |
Preference number: 1 (lower is better) Translates to: VEGLGVRILLLDWEL*SFQHMQSSKKKPAL Trigger: CAAAGCTGGTTTCTTTTTGGAGGACTGCATGTGCTGAAAGCTTCAGAGTTCCCAGTCCAGAAGCAGTATTCTAACTCCCAGCCCCTCCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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3UTR GCA 90 bp | TCTCCACTCTCCCCTCCCTCTGAATACACACAGCAACACCACCCATaGCTCCACAAGACCACAACTCCAAAAATAATAACCCACATCAGG | + |
Preference number: 1 (lower is better) Translates to: SPLSPPSEYTQQHHP*LHKTTTPKIITHIR Trigger: CCTGATGTGGGTTATTATTTTTGGAGTTGTGGTCTTGTGGAGGCATGGGTGGTGTTGCTGTGTGTATTCAGAGGGAGGGGAGAGTGGAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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3UTR CCA 90 bp | ACAGGCACTCATTCAGGAATTCTGGGAACTGTTAGCTCCCGAGCCTaGATCAAAGGGCCCATTCACTTGCATTCTACCCAGTCACATTCT | + |
Preference number: 1 (lower is better) Translates to: TGTHSGILGTVSSRA*IKGPIHLHSTQSHS Trigger: AGAATGTGACTGGGTAGAATGCAAGTGAATGGGCCCTTTGATCCAGGCTCGGGAGCTAACAGTTCCCAGAATTCCTGAATGAGTGCCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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3UTR GCA 90 bp | CTCCAGGGGATTTCTGGTGCTACCCAACTAGTCTCTAGCACAGTGTaGTTGTTTCAGGCTCCTAAACCAGAAAAGCACACCAACAAACCA | + |
Preference number: 1 (lower is better) Translates to: LQGISGATQLVSSTV*LFQAPKPEKHTNKP Trigger: TGGTTTGTTGGTGTGCTTTTCTGGTTTAGGAGCCTGAAACAAGCACACTGTGCTAGAGACTAGTTGGGTAGCACCAGAAATCCCCTGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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3UTR CCA 90 bp | TCACATTCTTGGTCTCATGTCACAGCCTCAGCCATAGAGGCACTGTaGGGTTTGCCAATCTATAGAGGCATATGCCCTGACATAATGCCA | + |
Preference number: 1 (lower is better) Translates to: SHSWSHVTASAIEAL*GLPIYRGICPDIMP Trigger: TGGCATTATGTCAGGGCATATGCCTCTATAGATTGGCAAACCCCACAGTGCCTCTATGGCTGAGGCTGTGACATGAGACCAAGAATGTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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3UTR CCA 90 bp | AAGAGCGAGGCACATGTTTTGGATTTACTCTTCATCTCTGAGCCATaGGATGGAGGGCATGTGACTTGCCCTAAGTACCTCGAACAAGAA | + |
Preference number: 1 (lower is better) Translates to: KSEAHVLDLLFISEP*DGGHVTCPKYLEQE Trigger: TTCTTGTTCGAGGTACTTAGGGCAAGTCACATGCCCTCCATCCCATGGCTCAGAGATGAAGAGTAAATCCAAAACATGTGCCTCGCTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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3UTR TCA 90 bp | GTACTCACCAAGGCATCTCCCCAGCCACGATGCTTTAGAAGTACTTaGAAGGCACGATGGCAGCAAAAACATATTATAAGCATCAAGACT | + |
Preference number: 1 (lower is better) Translates to: VLTKASPQPRCFRST*KARWQQKHIISIKT Trigger: AGTCTTGATGCTTATAATATGTTTTTGCTGCCATCGTGCCTTTCAAGTACTTCTAAAGCATCGTGGCTGGGGAGATGCCTTGGTGAGTAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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3UTR GCA 90 bp | TTAGAATACTGCTTCTGGACTGGGAACTCTGAAGCTTTCAGCACATaGAGTCCTCCAAAAAGAAACCAGCTTTGTTTACAGCTTATCAAC | + |
Preference number: 1 (lower is better) Translates to: LEYCFWTGNSEAFST*SPPKRNQLCLQLIN Trigger: GTTGATAAGCTGTAAACAAAGCTGGTTTCTTTTTGGAGGACTGCATGTGCTGAAAGCTTCAGAGTTCCCAGTCCAGAAGCAGTATTCTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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3UTR GCA 90 bp | TTGAAAGGCACGATGGCAGCAAAAACATATTATAAGCATCAAGACTaGAGAGACCCCAAAGCTCAGCGATCCATTTGTTTCCCTATTAAT | + |
Preference number: 1 (lower is better) Translates to: LKGTMAAKTYYKHQD*RDPKAQRSICFPIN Trigger: ATTAATAGGGAAACAAATGGATCGCTGAGCTTTGGGGTCTCTGCAGTCTTGATGCTTATAATATGTTTTTGCTGCCATCGTGCCTTTCAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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3UTR TCA 90 bp | TCACAGGCATGCATGTACTATGCCTGGCTTCAAGAAACCAAAGCATaGTACAAAATGATGAATGGCATTAACCATATTCTATTAACTAAG | + |
Preference number: 1 (lower is better) Translates to: SQACMYYAWLQETKA*YKMMNGINHILLTK Trigger: CTTAGTTAATAGAATATGGTTAATGCCATTCATCATTTTGTATCATGCTTTGGTTTCTTGAAGCCAGGCATAGTACATGCATGCCTGTGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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3UTR-3UTR CCA 90 bp | CCACTCTCCCCTCCCTCTGAATACACACAGCAACACCACCCATGCCTCCACAAGCCCCAGGGACACTCCTaGAATTGGTGGTGCAAAGAG | + |
Preference number: 2 (lower is better) Translates to: PLSPPSEYTQQHHPCLHKPQGHS*NWWCKE Trigger: CTCTTTGCACCACCAATTCCAGGAGTGTCCCTGGGG...CTTGTGGAGGCATGGGTGGTGTTGCTGTGTGTATTCAGAGGGAGGGGAGAGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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3UTR-3UTR CCA 90 bp | AGGACAGGCACTCATTCAGGAATTCTGGGAACTGTTAGCTCCCGAGCCTGGATCATGGAGCCAAGTGACTaGTGCTGTAGAGGCCTCGGC | + |
Preference number: 2 (lower is better) Translates to: RTGTHSGILGTVSSRAWIMEPSD*CCRGLG Trigger: GCCGAGGCCTCTACAGCACCAGTCACTTGGCTCCAT...GATCCAGGCTCGGGAGCTAACAGTTCCCAGAATTCCTGAATGAGTGCCTGTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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3UTR-3UTR CCA 90 bp | CCATACAACAGTACCCCCTCCTCCTCCTGGAAATCCCTCCAGGGGATTTCTGGTGCTGCGGCAAACACATaGAGACCAGAAGACAGCCAT | + |
Preference number: 2 (lower is better) Translates to: PYNSTPSSSWKSLQGISGAAANT*RPEDSH Trigger: ATGGCTGTCTTCTGGTCTCCATGTGTTTGCCGCAGC...ACCAGAAATCCCCTGGAGGGATTTCCAGGAGGAGGAGGGGGTACTGTTGTATGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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3UTR-3UTR CCA 90 bp | CCACTCTCCCCTCCCTCTGAATACACACAGCAACACCACCCATGCCTCCACAAGCTGATCCTTGTTCTATaGCTACTGCATGGTGGAGGG | + |
Preference number: 2 (lower is better) Translates to: PLSPPSEYTQQHHPCLHKLILVL*LLHGGG Trigger: CCCTCCACCATGCAGTAGCCATAGAACAAGGATCAG...CTTGTGGAGGCATGGGTGGTGTTGCTGTGTGTATTCAGAGGGAGGGGAGAGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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3UTR-3UTR TCA 90 bp | TTCTACCCAGTCACATTCTTGGTCTCATGTCACAGCCTCAGCCATAGAGGCACTGGGATGGAGGGCATGTaGCTTGCCCTAAGTACCTCG | + |
Preference number: 2 (lower is better) Translates to: FYPVTFLVSCHSLSHRGTGMEGM*LALSTS Trigger: CGAGGTACTTAGGGCAAGTCACATGCCCTCCATCCC...AGTGCCTCTATGGCTGAGGCTGTGACATGAGACCAAGAATGTGACTGGGTAGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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3UTR-3UTR TCA 90 bp | AGGACAGGCACTCATTCAGGAATTCTGGGAACTGTTAGCTCCCGAGCCTGGATCACTCTCCCCTCCCTCTaGATACACACAGCAACACCA | + |
Preference number: 2 (lower is better) Translates to: RTGTHSGILGTVSSRAWITLPSL*IHTATP Trigger: TGGTGTTGCTGTGTGTATTCAGAGGGAGGGGAGAGT...GATCCAGGCTCGGGAGCTAACAGTTCCCAGAATTCCTGAATGAGTGCCTGTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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3UTR CAA 90 bp | CTGGATCAAAGGGCCCATTCACTTGCATTCTACCCAGTCACATTCTaGGTCTCATGTCACAGCCTCAGCCATAGAGGCACTGTGGGGTTT | + |
Preference number: 2 (lower is better) Translates to: LDQRAHSLAFYPVTF*VSCHSLSHRGTVGF Trigger: AAACCCCACAGTGCCTCTATGGCTGAGGCTGTGACATGAGACCAAGAATGTGACTGGGTAGAATGCAAGTGAATGGGCCCTTTGATCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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3UTR-3UTR TCA 90 bp | CCCCTCCCTCTGAATACACACAGCAACACCACCCATGCCTCCACAAGACCACAATCTAATGGACTTCCTTaGAGGACCTCCAATCCAGAA | + |
Preference number: 2 (lower is better) Translates to: PLPLNTHSNTTHASTRPQSNGLP*RTSNPE Trigger: TTCTGGATTGGAGGTCCTTCAAGGAAGTCCATTAGA...TTGTGGTCTTGTGGAGGCATGGGTGGTGTTGCTGTGTGTATTCAGAGGGAGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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3UTR-3UTR CCA 90 bp | CTGTGGTCAATGAGCCTCCAAGTGAATGTGAGTCAGGACAGGCACTCATTCAGGATGGCTACTGCATGGTaGAGGGTCCTGAAGCTTTAC | + |
Preference number: 2 (lower is better) Translates to: LWSMSLQVNVSQDRHSFRMATAW*RVLKLY Trigger: GTAAAGCTTCAGGACCCTCCACCATGCAGTAGCCAT...CCTGAATGAGTGCCTGTCCTGACTCACATTCACTTGGAGGCTCATTGACCACAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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3UTR CAA 90 bp | CTCCAATCCAGAATTGAAACAAGATATTCATTCCGTAGACTGGCTTaGAGGGAAACAAATGCCCAGGCTGTGCCTGAGGCCCCAGGGACA | + |
Preference number: 2 (lower is better) Translates to: LQSRIETRYSFRRLA*RETNAQAVPEAPGT Trigger: TGTCCCTGGGGCCTCAGGCACAGCCTGGGCATTTGTTTCCCTCAAAGCCAGTCTACGGAATGAATATCTTGTTTCAATTCTGGATTGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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3UTR CAA 90 bp | TCTTGGTCTCATGTCACAGCCTCAGCCATAGAGGCACTGTGGGGTTaGCCAATCTATAGAGGCATATGCCCTGACATAATGCCATGTCCT | + |
Preference number: 2 (lower is better) Translates to: SWSHVTASAIEALWG*PIYRGICPDIMPCP Trigger: AGGACATGGCATTATGTCAGGGCATATGCCTCTATAGATTGGCAAACCCCACAGTGCCTCTATGGCTGAGGCTGTGACATGAGACCAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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3UTR-3UTR TCA 90 bp | CCACTCTCCCCTCCCTCTGAATACACACAGCAACACCACCCATGCCTCCACAAGCATGGTGGAGGGTCCTaGAGCTTTACAAATATAAAA | + |
Preference number: 2 (lower is better) Translates to: PLSPPSEYTQQHHPCLHKHGGGS*SFTNIK Trigger: TTTTATATTTGTAAAGCTTCAGGACCCTCCACCATG...CTTGTGGAGGCATGGGTGGTGTTGCTGTGTGTATTCAGAGGGAGGGGAGAGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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3UTR-3UTR GCA 90 bp | AGGACAGGCACTCATTCAGGAATTCTGGGAACTGTTAGCTCCCGAGCCTGGATCTCCTGGAATTGGTGGTaGAAAGAGGTACAATGGCAA | + |
Preference number: 2 (lower is better) Translates to: RTGTHSGILGTVSSRAWISWNWW*KEVQWQ Trigger: TTGCCATTGTACCTCTTTGCACCACCAATTCCAGGA...GATCCAGGCTCGGGAGCTAACAGTTCCCAGAATTCCTGAATGAGTGCCTGTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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3UTR-3UTR GCA 90 bp | TTCTACCCAGTCACATTCTTGGTCTCATGTCACAGCCTCAGCCATAGAGGCACTCCAGGATCACAGGCATaGATGTACTATGCCTGGCTT | + |
Preference number: 2 (lower is better) Translates to: FYPVTFLVSCHSLSHRGTPGSQA*MYYAWL Trigger: AAGCCAGGCATAGTACATGCATGCCTGTGATCCTGG...AGTGCCTCTATGGCTGAGGCTGTGACATGAGACCAAGAATGTGACTGGGTAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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3UTR-3UTR CCA 90 bp | CAGCAACACCACCCATGCCTCCACAAGACCACAACTCCAAAAATAATAACCCACAAGCCAGTCTGTGGATaGCAGGGACAAACTGCTTCC | + |
Preference number: 2 (lower is better) Translates to: QQHHPCLHKTTTPKIITHKPVCG*QGQTAS Trigger: GGAAGCAGTTTGTCCCTGCCATCCACAGACTGGCTT...GTGGGTTATTATTTTTGGAGTTGTGGTCTTGTGGAGGCATGGGTGGTGTTGCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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3UTR-3UTR TCA 90 bp | TTCTACCCAGTCACATTCTTGGTCTCATGTCACAGCCTCAGCCATAGAGGCACTTTCTCTGAGACTTCCTaGTGCTCCTCCCATACAACA | + |
Preference number: 2 (lower is better) Translates to: FYPVTFLVSCHSLSHRGTFSETS*CSSHTT Trigger: TGTTGTATGGGAGGAGCATCAGGAAGTCTCAGAGAA...AGTGCCTCTATGGCTGAGGCTGTGACATGAGACCAAGAATGTGACTGGGTAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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3UTR-3UTR CCA 90 bp | AGGACAGGCACTCATTCAGGAATTCTGGGAACTGTTAGCTCCCGAGCCTGGATCGCGAGGCACATGTTTTaGATTTACTCTTCATCTCTG | + |
Preference number: 2 (lower is better) Translates to: RTGTHSGILGTVSSRAWIARHMF*IYSSSL Trigger: CAGAGATGAAGAGTAAATCCAAAACATGTGCCTCGC...GATCCAGGCTCGGGAGCTAACAGTTCCCAGAATTCCTGAATGAGTGCCTGTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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3UTR-3UTR GCA 90 bp | CTGTGGTCAATGAGCCTCCAAGTGAATGTGAGTCAGGACAGGCACTCATTCAGGGAAGCTTTCAGCACATaGAGTCCTCCAAAAAGAAAC | + |
Preference number: 2 (lower is better) Translates to: LWSMSLQVNVSQDRHSFREAFST*SPPKRN Trigger: GTTTCTTTTTGGAGGACTGCATGTGCTGAAAGCTTC...CCTGAATGAGTGCCTGTCCTGACTCACATTCACTTGGAGGCTCATTGACCACAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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3UTR-3UTR CCA 90 bp | CAGCAACACCACCCATGCCTCCACAAGACCACAACTCCAAAAATAATAACCCACTGTGAAACTGTCCTGTaGGACAACCCTGGGTATTCA | + |
Preference number: 2 (lower is better) Translates to: QQHHPCLHKTTTPKIITHCETVL*DNPGYS Trigger: TGAATACCCAGGGTTGTCCCACAGGACAGTTTCACA...GTGGGTTATTATTTTTGGAGTTGTGGTCTTGTGGAGGCATGGGTGGTGTTGCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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3UTR CAA 90 bp | CAGGGGATTTCTGGTGCTACCCAACTAGTCTCTAGCACAGTGTGCTaGTTTCAGGCTCCTAAACCAGAAAAGCACACCAACAAACCAAAT | + |
Preference number: 2 (lower is better) Translates to: QGISGATQLVSSTVC*FQAPKPEKHTNKPN Trigger: ATTTGGTTTGTTGGTGTGCTTTTCTGGTTTAGGAGCCTGAAACAAGCACACTGTGCTAGAGACTAGTTGGGTAGCACCAGAAATCCCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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3UTR-3UTR GCA 90 bp | CAGCAACACCACCCATGCCTCCACAAGACCACAACTCCAAAAATAATAACCCACATAGGTGTTCACCCTTaGCTTCCAGGTCTTTCTCAT | + |
Preference number: 2 (lower is better) Translates to: QQHHPCLHKTTTPKIITHIGVHP*LPGLSH Trigger: ATGAGAAAGACCTGGAAGGCAAGGGTGAACACCTAT...GTGGGTTATTATTTTTGGAGTTGTGGTCTTGTGGAGGCATGGGTGGTGTTGCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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3UTR-3UTR TCA 90 bp | CTTTCAGCACATGCAGTCCTCCAAAAAGAAACCAGCTTTGTTTACAGCTTATCATCCGTAGACTGGCTTTaGGGGAAACAAATGCCCAGG | + |
Preference number: 2 (lower is better) Translates to: LSAHAVLQKETSFVYSLSSVDWL*GKQMPR Trigger: CCTGGGCATTTGTTTCCCTCAAAGCCAGTCTACGGA...TGATAAGCTGTAAACAAAGCTGGTTTCTTTTTGGAGGACTGCATGTGCTGAAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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3UTR-3UTR TCA 90 bp | TTCTACCCAGTCACATTCTTGGTCTCATGTCACAGCCTCAGCCATAGAGGCACTCCTCCAATCCAGAATTaGAACAAGATATTCATTCCG | + |
Preference number: 2 (lower is better) Translates to: FYPVTFLVSCHSLSHRGTPPIQN*NKIFIP Trigger: CGGAATGAATATCTTGTTTCAATTCTGGATTGGAGG...AGTGCCTCTATGGCTGAGGCTGTGACATGAGACCAAGAATGTGACTGGGTAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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3UTR-3UTR TCA 90 bp | CAGCAACACCACCCATGCCTCCACAAGACCACAACTCCAAAAATAATAACCCACAGCCGAGGTGAACATTaGACATTTAATTCTTCTGCC | + |
Preference number: 2 (lower is better) Translates to: QQHHPCLHKTTTPKIITHSRGEH*TFNSSA Trigger: GGCAGAAGAATTAAATGTTCAATGTTCACCTCGGCT...GTGGGTTATTATTTTTGGAGTTGTGGTCTTGTGGAGGCATGGGTGGTGTTGCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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3UTR-3UTR TCA 90 bp | CAGCAACACCACCCATGCCTCCACAAGACCACAACTCCAAAAATAATAACCCACTATGGAAAAAGCTACTaGTCCTTGTTCTATGGCTAC | + |
Preference number: 2 (lower is better) Translates to: QQHHPCLHKTTTPKIITHYGKSY*SLFYGY Trigger: GTAGCCATAGAACAAGGATCAGTAGCTTTTTCCATA...GTGGGTTATTATTTTTGGAGTTGTGGTCTTGTGGAGGCATGGGTGGTGTTGCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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3UTR-3UTR TCA 90 bp | CTTTCAGCACATGCAGTCCTCCAAAAAGAAACCAGCTTTGTTTACAGCTTATCATTTACTCTTCATCTCTaGGCCATGGGATGGAGGGCA | + |
Preference number: 2 (lower is better) Translates to: LSAHAVLQKETSFVYSLSFTLHL*AMGWRA Trigger: TGCCCTCCATCCCATGGCTCAGAGATGAAGAGTAAA...TGATAAGCTGTAAACAAAGCTGGTTTCTTTTTGGAGGACTGCATGTGCTGAAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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3UTR-3UTR TCA 90 bp | CAATGTGTTCAAAACCAGCCTAACCTATATAGCAAGTTCCAGTGGAGCTATAACGACAAACTGCTTCCATaGAGGTCCAAGAAGTGTTCG | + |
Preference number: 2 (lower is better) Translates to: QCVQNQPNLYSKFQWSYNDKLLP*RSKKCS Trigger: CGAACACTTCTTGGACCTTCATGGAAGCAGTTTGTC...GTTATAGCTCCACTGGAACTTGCTATATAGGTTAGGCTGGTTTTGAACACATTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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3UTR-3UTR GCA 90 bp | CTTTCAGCACATGCAGTCCTCCAAAAAGAAACCAGCTTTGTTTACAGCTTATCATCTATAAAGCCATGCTaGGGCAAACACATGGAGACC | + |
Preference number: 2 (lower is better) Translates to: LSAHAVLQKETSFVYSLSSIKPC*GKHMET Trigger: GGTCTCCATGTGTTTGCCGCAGCATGGCTTTATAGA...TGATAAGCTGTAAACAAAGCTGGTTTCTTTTTGGAGGACTGCATGTGCTGAAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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3UTR-3UTR GCA 90 bp | CTTTCAGCACATGCAGTCCTCCAAAAAGAAACCAGCTTTGTTTACAGCTTATCATTGTTCTATGGCTACTaGATGGTGGAGGGTCCTGAA | + |
Preference number: 2 (lower is better) Translates to: LSAHAVLQKETSFVYSLSLFYGY*MVEGPE Trigger: TTCAGGACCCTCCACCATGCAGTAGCCATAGAACAA...TGATAAGCTGTAAACAAAGCTGGTTTCTTTTTGGAGGACTGCATGTGCTGAAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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3UTR-3UTR TCA 90 bp | GCACATGCAGTCCTCCAAAAAGAAACCAGCTTTGTTTACAGCTTATCAACACACTGTTTCCCTATTAATTaGCTTGGAATTTCACCCTTG | + |
Preference number: 2 (lower is better) Translates to: AHAVLQKETSFVYSLSTHCFPIN*LGISPL Trigger: CAAGGGTGAAATTCCAAGTCAATTAATAGGGAAACA...GTGTGTTGATAAGCTGTAAACAAAGCTGGTTTCTTTTTGGAGGACTGCATGTGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
||
3UTR-3UTR TCA 90 bp | CAATGTGTTCAAAACCAGCCTAACCTATATAGCAAGTTCCAGTGGAGCTATAACCAAGAAACCAAAGCATaGTACAAAATGATGAATGGC | + |
Preference number: 2 (lower is better) Translates to: QCVQNQPNLYSKFQWSYNQETKA*YKMMNG Trigger: GCCATTCATCATTTTGTATCATGCTTTGGTTTCTTG...GTTATAGCTCCACTGGAACTTGCTATATAGGTTAGGCTGGTTTTGAACACATTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
||
3UTR TCA 72 bp | ATGGAGCCAAGTGACTGGTGCTGTAGAGGCCTCGGCTaGGAAAGGAAAAGGTGGAGGGGCTGGGAGTTAGAA | + |
Preference number: 3 (lower is better) Translates to: MEPSDWCCRGLG*ERKRWRGWELE Trigger: TTCTAACTCCCAGCCCCTCCACCTTTTCCTTTCTCAGCCGAGGCCTCTACAGCACCAGTCACTTGGCTCCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
||
3UTR-3UTR CAA 90 bp | CCCCTCCCTCTGAATACACACAGCAACACCACCCATGCCTCCACAAGACCACAAATGACTCTGCCTGTCTaGTCTCCTAGTGCACAGGGT | + |
Preference number: 3 (lower is better) Translates to: PLPLNTHSNTTHASTRPQMTLPV*SPSAQG Trigger: ACCCTGTGCACTAGGAGACAAGACAGGCAGAGTCAT...TTGTGGTCTTGTGGAGGCATGGGTGGTGTTGCTGTGTGTATTCAGAGGGAGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
||
3UTR-3UTR CAA 90 bp | CCACTCTCCCCTCCCTCTGAATACACACAGCAACACCACCCATGCCTCCACAAGCATAGGTGTTCACCCTaGCCTTCCAGGTCTTTCTCA | + |
Preference number: 3 (lower is better) Translates to: PLSPPSEYTQQHHPCLHKHRCSP*PSRSFS Trigger: TGAGAAAGACCTGGAAGGCAAGGGTGAACACCTATG...CTTGTGGAGGCATGGGTGGTGTTGCTGTGTGTATTCAGAGGGAGGGGAGAGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
||
3UTR CCA 72 bp | CTGTGCCTGAGGCCCCAGGGACACTCCTGGAATTGGTaGTGCAAAGAGGTACAATGGCAAGGTTTCAATTGC | + |
Preference number: 3 (lower is better) Translates to: LCLRPQGHSWNW*CKEVQWQGFNC Trigger: GCAATTGAAACCTTGCCATTGTACCTCTTTGCACCACCAATTCCAGGAGTGTCCCTGGGGCCTCAGGCACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
||
3UTR CCA 72 bp | AGGCTGTGCCTGAGGCCCCAGGGACACTCCTGGAATTaGTGGTGCAAAGAGGTACAATGGCAAGGTTTCAAT | + |
Preference number: 3 (lower is better) Translates to: RLCLRPQGHSWN*WCKEVQWQGFN Trigger: ATTGAAACCTTGCCATTGTACCTCTTTGCACCACCAATTCCAGGAGTGTCCCTGGGGCCTCAGGCACAGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
||
3UTR-3UTR CAA 90 bp | CCATACAACAGTACCCCCTCCTCCTCCTGGAAATCCCTCCAGGGGATTTCTGGTTCCTTAGGAGAGTTGTaGTGCACTAGCTATCCCTGC | + |
Preference number: 3 (lower is better) Translates to: PYNSTPSSSWKSLQGISGSLGEL*CTSYPC Trigger: GCAGGGATAGCTAGTGCACAACAACTCTCCTAAGGA...ACCAGAAATCCCCTGGAGGGATTTCCAGGAGGAGGAGGGGGTACTGTTGTATGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
||
3UTR GCA 72 bp | TGCCTGAGGCCCCAGGGACACTCCTGGAATTGGTGGTaGAAAGAGGTACAATGGCAAGGTTTCAATTGCAGT | + |
Preference number: 3 (lower is better) Translates to: CLRPQGHSWNWW*KEVQWQGFNCS Trigger: ACTGCAATTGAAACCTTGCCATTGTACCTCTTTGCACCACCAATTCCAGGAGTGTCCCTGGGGCCTCAGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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3UTR CCA 72 bp | GGGCCCATTCACTTGCATTCTACCCAGTCACATTCTTaGTCTCATGTCACAGCCTCAGCCATAGAGGCACTG | + |
Preference number: 3 (lower is better) Translates to: GPIHLHSTQSHS*SHVTASAIEAL Trigger: CAGTGCCTCTATGGCTGAGGCTGTGACATGAGACCAAGAATGTGACTGGGTAGAATGCAAGTGAATGGGCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
||
3UTR TCA 72 bp | AAAGGAGCTCTTAGGCATGGATTCTCTGAGACTTCCTaGTGCTCCTCCCATACAACAGTACCCCCTCCTCCT | + |
Preference number: 3 (lower is better) Translates to: KGALRHGFSETS*CSSHTTVPPPP Trigger: AGGAGGAGGGGGTACTGTTGTATGGGAGGAGCATCAGGAAGTCTCAGAGAATCCATGCCTAAGAGCTCCTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
||
3UTR GCA 72 bp | CTACACAAGTGCTTCAACAGGAAGCAGTGTCAAGCTTaGCGGTCCATGCCTTTAATTCCAGCACTTGGGAGG | + |
Preference number: 3 (lower is better) Translates to: LHKCFNRKQCQA*RSMPLIPALGR Trigger: CCTCCCAAGTGCTGGAATTAAAGGCATGGACCGGCAAGCTTGACACTGCTTCCTGTTGAAGCACTTGTGTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
||
3UTR CCA 72 bp | CATTCAGGAATTCTGGGAACTGTTAGCTCCCGAGCCTaGATCAAAGGGCCCATTCACTTGCATTCTACCCAG | + |
Preference number: 3 (lower is better) Translates to: HSGILGTVSSRA*IKGPIHLHSTQ Trigger: CTGGGTAGAATGCAAGTGAATGGGCCCTTTGATCCAGGCTCGGGAGCTAACAGTTCCCAGAATTCCTGAATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
||
3UTR-3UTR CAA 90 bp | CAGCAACACCACCCATGCCTCCACAAGACCACAACTCCAAAAATAATAACCCACGGGACACTCCTGGAATaGGTGGTGCAAAGAGGTACA | + |
Preference number: 3 (lower is better) Translates to: QQHHPCLHKTTTPKIITHGTLLE*VVQRGT Trigger: TGTACCTCTTTGCACCACCAATTCCAGGAGTGTCCC...GTGGGTTATTATTTTTGGAGTTGTGGTCTTGTGGAGGCATGGGTGGTGTTGCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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3UTR GCA 72 bp | AATAATCACACAAGGACTCCACAGGTGCTACACAAGTaGTTCAACAGGAAGCAGTGTCAAGCTTGCCGGTCC | + |
Preference number: 3 (lower is better) Translates to: NNHTRTPQVLHK*FNRKQCQACRS Trigger: GGACCGGCAAGCTTGACACTGCTTCCTGTTGAAGCACTTGTGTAGCACCTGTGGAGTCCTTGTGTGATTATT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
||
3UTR GCA 72 bp | GAAAGGAAAAGGTGGAGGGGCTGGGAGTTAGAATACTaGTTCTGGACTGGGAACTCTGAAGCTTTCAGCACA | + |
Preference number: 3 (lower is better) Translates to: ERKRWRGWELEY*FWTGNSEAFST Trigger: TGTGCTGAAAGCTTCAGAGTTCCCAGTCCAGAAGCAGTATTCTAACTCCCAGCCCCTCCACCTTTTCCTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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3UTR CCA 72 bp | AAAAGGTGGAGGGGCTGGGAGTTAGAATACTGCTTCTaGACTGGGAACTCTGAAGCTTTCAGCACATGCAGT | + |
Preference number: 3 (lower is better) Translates to: KRWRGWELEYCF*TGNSEAFSTCS Trigger: ACTGCATGTGCTGAAAGCTTCAGAGTTCCCAGTCCAGAAGCAGTATTCTAACTCCCAGCCCCTCCACCTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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3UTR GCA 72 bp | TCCCCTCCCTCTGAATACACACAGCAACACCACCCATaGCTCCACAAGACCACAACTCCAAAAATAATAACC | + |
Preference number: 3 (lower is better) Translates to: SPPSEYTQQHHP*LHKTTTPKIIT Trigger: GGTTATTATTTTTGGAGTTGTGGTCTTGTGGAGGCATGGGTGGTGTTGCTGTGTGTATTCAGAGGGAGGGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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3UTR CCA 72 bp | GTAAGAATGGCAGAGCTTTCTAAGCCAGTCTGTGGATaGCAGGGACAAACTGCTTCCATGAAGGTCCAAGAA | + |
Preference number: 3 (lower is better) Translates to: VRMAELSKPVCG*QGQTASMKVQE Trigger: TTCTTGGACCTTCATGGAAGCAGTTTGTCCCTGCCATCCACAGACTGGCTTAGAAAGCTCTGCCATTCTTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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3UTR-3UTR CAA 90 bp | CCATACAACAGTACCCCCTCCTCCTCCTGGAAATCCCTCCAGGGGATTTCTGGTACCTCCAATCCAGAATaGAAACAAGATATTCATTCC | + |
Preference number: 3 (lower is better) Translates to: PYNSTPSSSWKSLQGISGTSNPE*KQDIHS Trigger: GGAATGAATATCTTGTTTCAATTCTGGATTGGAGGT...ACCAGAAATCCCCTGGAGGGATTTCCAGGAGGAGGAGGGGGTACTGTTGTATGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
||
3UTR TCA 72 bp | CAGTCTGGCCTCAAGCTATACAGCCGAGGTGAACATTaGACATTTAATTCTTCTGCCCACACATCCCAAGTC | + |
Preference number: 3 (lower is better) Translates to: QSGLKLYSRGEH*TFNSSAHTSQV Trigger: GACTTGGGATGTGTGGGCAGAAGAATTAAATGTTCAATGTTCACCTCGGCTGTATAGCTTGAGGCCAGACTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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3UTR GCA 72 bp | CCTCGAACAAGAATAATCACACAAGGACTCCACAGGTaGTACACAAGTGCTTCAACAGGAAGCAGTGTCAAG | + |
Preference number: 3 (lower is better) Translates to: PRTRIITQGLHR*YTSASTGSSVK Trigger: CTTGACACTGCTTCCTGTTGAAGCACTTGTGTAGCACCTGTGGAGTCCTTGTGTGATTATTCTTGTTCGAGG 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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3UTR-3UTR CAA 90 bp | GCACATGCAGTCCTCCAAAAAGAAACCAGCTTTGTTTACAGCTTATCAACACACTTCCGTAGACTGGCTTaGAGGGAAACAAATGCCCAG | + |
Preference number: 3 (lower is better) Translates to: AHAVLQKETSFVYSLSTHFRRLA*RETNAQ Trigger: CTGGGCATTTGTTTCCCTCAAAGCCAGTCTACGGAA...GTGTGTTGATAAGCTGTAAACAAAGCTGGTTTCTTTTTGGAGGACTGCATGTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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3UTR TCA 72 bp | CTGGGAGTTAGAATACTGCTTCTGGACTGGGAACTCTaGAGCTTTCAGCACATGCAGTCCTCCAAAAAGAAA | + |
Preference number: 3 (lower is better) Translates to: LGVRILLLDWEL*SFQHMQSSKKK Trigger: TTTCTTTTTGGAGGACTGCATGTGCTGAAAGCTTCAGAGTTCCCAGTCCAGAAGCAGTATTCTAACTCCCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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3UTR GCA 72 bp | TGCTTCTGGACTGGGAACTCTGAAGCTTTCAGCACATaGAGTCCTCCAAAAAGAAACCAGCTTTGTTTACAG | + |
Preference number: 3 (lower is better) Translates to: CFWTGNSEAFST*SPPKRNQLCLQ Trigger: CTGTAAACAAAGCTGGTTTCTTTTTGGAGGACTGCATGTGCTGAAAGCTTCAGAGTTCCCAGTCCAGAAGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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3UTR GCA 72 bp | ATCCCAAGTCCCAGGATCACAGGCATGCATGTACTATaGCTGGCTTCAAGAAACCAAAGCATGATACAAAAT | + |
Preference number: 3 (lower is better) Translates to: IPSPRITGMHVL*LASRNQSMIQN Trigger: ATTTTGTATCATGCTTTGGTTTCTTGAAGCCAGGCATAGTACATGCATGCCTGTGATCCTGGGACTTGGGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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3UTR CCA 72 bp | CTGCTATGCCTATCAAGTGATGGGCGATTTGAGGTATaGAAAAAGCTACTGATCCTTGTTCTATGGCTACTG | + |
Preference number: 3 (lower is better) Translates to: LLCLSSDGRFEV*KKLLILVLWLL Trigger: CAGTAGCCATAGAACAAGGATCAGTAGCTTTTTCCATACCTCAAATCGCCCATCACTTGATAGGCATAGCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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3UTR TCA 72 bp | CCCAAAGCTCAGCGATCCATTTGTTTCCCTATTAATTaGCTTGGAATTTCACCCTTGTCCTTAGGAGAGTTG | + |
Preference number: 3 (lower is better) Translates to: PKAQRSICFPIN*LGISPLSLGEL Trigger: CAACTCTCCTAAGGACAAGGGTGAAATTCCAAGTCAATTAATAGGGAAACAAATGGATCGCTGAGCTTTGGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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3UTR GCA 72 bp | ACGATGGCAGCAAAAACATATTATAAGCATCAAGACTaGAGAGACCCCAAAGCTCAGCGATCCATTTGTTTC | + |
Preference number: 3 (lower is better) Translates to: TMAAKTYYKHQD*RDPKAQRSICF Trigger: GAAACAAATGGATCGCTGAGCTTTGGGGTCTCTGCAGTCTTGATGCTTATAATATGTTTTTGCTGCCATCGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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3UTR GCA 72 bp | GATAAGCACTTTTTAAACTTACAAGACTGTAGGACATaGAGTGCTAGAAAACAATCTTGGTCTGTGGCCACC | + |
Preference number: 3 (lower is better) Translates to: DKHFLNLQDCRT*SARKQSWSVAT Trigger: GGTGGCCACAGACCAAGATTGTTTTCTAGCACTGCATGTCCTACAGTCTTGTAAGTTTAAAAAGTGCTTATC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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3UTR TCA 72 bp | ATCCTTGTTCTATGGCTACTGCATGGTGGAGGGTCCTaGAGCTTTACAAATATAAAACGTACAAATATAGAA | + |
Preference number: 3 (lower is better) Translates to: ILVLWLLHGGGS*SFTNIKRTNIE Trigger: TTCTATATTTGTACGTTTTATATTTGTAAAGCTTCAGGACCCTCCACCATGCAGTAGCCATAGAACAAGGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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3UTR TCA 72 bp | TGCATGTACTATGCCTGGCTTCAAGAAACCAAAGCATaGTACAAAATGATGAATGGCATTAACCATATTCTA | + |
Preference number: 3 (lower is better) Translates to: CMYYAWLQETKA*YKMMNGINHIL Trigger: TAGAATATGGTTAATGCCATTCATCATTTTGTATCATGCTTTGGTTTCTTGAAGCCAGGCATAGTACATGCA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS-3UTR CCA 90 bp | CTGTGGTCAATGAGCCTCCAAGTGAATGTGAGTCAGGACAGGCACTCATTCAGGGGTGCGGACTGGAGGTaGCATCGCAGGTGGCCGGGG | + |
Preference number: 4 (lower is better) Translates to: LWSMSLQVNVSQDRHSFRGADWR*HRRWPG Trigger: CCCCGGCCACCTGCGATGCCACCTCCAGTCCGCACC...CCTGAATGAGTGCCTGTCCTGACTCACATTCACTTGGAGGCTCATTGACCACAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS-3UTR CCA 90 bp | CCACTCTCCCCTCCCTCTGAATACACACAGCAACACCACCCATGCCTCCACAAGAGGAGGCATTGGAGCTaGGGCTGGGACTGGAGCCAC | + |
Preference number: 4 (lower is better) Translates to: PLSPPSEYTQQHHPCLHKRRHWS*GWDWSH Trigger: GTGGCTCCAGTCCCAGCCCCAGCTCCAATGCCTCCT...CTTGTGGAGGCATGGGTGGTGTTGCTGTGTGTATTCAGAGGGAGGGGAGAGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS-3UTR TCA 90 bp | CCATACAACAGTACCCCCTCCTCCTCCTGGAAATCCCTCCAGGGGATTTCTGGTCCGGGCCATGCTGCCTaGATGGCCATCCCAAGTCAC | + |
Preference number: 4 (lower is better) Translates to: PYNSTPSSSWKSLQGISGPGHAA*MAIPSH Trigger: GTGACTTGGGATGGCCATTCAGGCAGCATGGCCCGG...ACCAGAAATCCCCTGGAGGGATTTCCAGGAGGAGGAGGGGGTACTGTTGTATGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS-3UTR TCA 90 bp | TTCTACCCAGTCACATTCTTGGTCTCATGTCACAGCCTCAGCCATAGAGGCACTGTGGGCGGGGCGCCATaGTGGGAGGTGCTGCAGGAG | + |
Preference number: 4 (lower is better) Translates to: FYPVTFLVSCHSLSHRGTVGGAP*WEVLQE Trigger: CTCCTGCAGCACCTCCCATCATGGCGCCCCGCCCAC...AGTGCCTCTATGGCTGAGGCTGTGACATGAGACCAAGAATGTGACTGGGTAGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS-3UTR GCA 90 bp | AGGACAGGCACTCATTCAGGAATTCTGGGAACTGTTAGCTCCCGAGCCTGGATCGCTGGGTCCGGGCCATaGTGCCTGAATGGCCATCCC | + |
Preference number: 4 (lower is better) Translates to: RTGTHSGILGTVSSRAWIAGSGP*CLNGHP Trigger: GGGATGGCCATTCAGGCAGCATGGCCCGGACCCAGC...GATCCAGGCTCGGGAGCTAACAGTTCCCAGAATTCCTGAATGAGTGCCTGTCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS-3UTR CCA 90 bp | CACTCTCCACTCTCCCCTCCCTCTGAATACACACAGCAACACCACCCATGCCTCGTATCCTGGTCCAGCTaGGAAGGAGTCTCCTCGGCC | + |
Preference number: 4 (lower is better) Translates to: HSPLSPPSEYTQQHHPCLVSWSS*EGVSSA Trigger: GGCCGAGGAGACTCCTTCCCAGCTGGACCAGGATAC...GAGGCATGGGTGGTGTTGCTGTGTGTATTCAGAGGGAGGGGAGAGTGGAGAGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS-3UTR TCA 90 bp | GAGGCCCCAGGGACACTCCTGGAATTGGTGGTGCAAAGAGGTACAATGGCAAGGGGAGGTGGTGGCTGCTaGGGGATTTCATTGGGCTTG | + |
Preference number: 4 (lower is better) Translates to: EAPGTLLELVVQRGTMARGGGGC*GISLGL Trigger: CAAGCCCAATGAAATCCCTCAGCAGCCACCACCTCC...CCTTGCCATTGTACCTCTTTGCACCACCAATTCCAGGAGTGTCCCTGGGGCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS-3UTR GCA 90 bp | CCATACAACAGTACCCCCTCCTCCTCCTGGAAATCCCTCCAGGGGATTTCTGGTTGGGGCAGCTGCTGTTaGGTAGCTTGCTGCTGCTGC | + |
Preference number: 4 (lower is better) Translates to: PYNSTPSSSWKSLQGISGWGSCC*VACCCC Trigger: GCAGCAGCAGCAAGCTACGCAACAGCAGCTGCCCCA...ACCAGAAATCCCCTGGAGGGATTTCCAGGAGGAGGAGGGGGTACTGTTGTATGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS-3UTR TCA 90 bp | CAGCAACACCACCCATGCCTCCACAAGACCACAACTCCAAAAATAATAACCCACCATGGGGGCAATCACTaGGCCTGGGGGCAGCCGGAC | + |
Preference number: 4 (lower is better) Translates to: QQHHPCLHKTTTPKIITHHGGNH*AWGQPD Trigger: GTCCGGCTGCCCCCAGGCTCAGTGATTGCCCCCATG...GTGGGTTATTATTTTTGGAGTTGTGGTCTTGTGGAGGCATGGGTGGTGTTGCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS-3UTR GCA 90 bp | CCATACAACAGTACCCCCTCCTCCTCCTGGAAATCCCTCCAGGGGATTTCTGGTACCTTCTGGGGCAGCTaGTGTTGCGTAGCTTGCTGC | + |
Preference number: 4 (lower is better) Translates to: PYNSTPSSSWKSLQGISGTFWGS*CCVACC Trigger: GCAGCAAGCTACGCAACAGCAGCTGCCCCAGAAGGT...ACCAGAAATCCCCTGGAGGGATTTCCAGGAGGAGGAGGGGGTACTGTTGTATGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS-3UTR GCA 90 bp | CAGCAACACCACCCATGCCTCCACAAGACCACAACTCCAAAAATAATAACCCACATGGAGCGGTCCCGCTaGTCCAGCCAGCGGGGGTCA | + |
Preference number: 4 (lower is better) Translates to: QQHHPCLHKTTTPKIITHMERSR*SSQRGS Trigger: TGACCCCCGCTGGCTGGAGCAGCGGGACCGCTCCAT...GTGGGTTATTATTTTTGGAGTTGTGGTCTTGTGGAGGCATGGGTGGTGTTGCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS-3UTR GCA 90 bp | CTGTGGTCAATGAGCCTCCAAGTGAATGTGAGTCAGGACAGGCACTCATTCAGGGGGTCCGGGCCATGCTaGCTGAATGGCCATCCCAAG | + |
Preference number: 4 (lower is better) Translates to: LWSMSLQVNVSQDRHSFRGSGPC*LNGHPK Trigger: CTTGGGATGGCCATTCAGGCAGCATGGCCCGGACCC...CCTGAATGAGTGCCTGTCCTGACTCACATTCACTTGGAGGCTCATTGACCACAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS-3UTR GCA 90 bp | CCATACAACAGTACCCCCTCCTCCTCCTGGAAATCCCTCCAGGGGATTTCTGGTCGCCATGATGGGAGGTaGTGCAGGAGGCATAGGTAC | + |
Preference number: 4 (lower is better) Translates to: PYNSTPSSSWKSLQGISGRHDGR*CRRHRY Trigger: GTACCTATGCCTCCTGCAGCACCTCCCATCATGGCG...ACCAGAAATCCCCTGGAGGGATTTCCAGGAGGAGGAGGGGGTACTGTTGTATGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS-3UTR CCA 90 bp | AGGACAGGCACTCATTCAGGAATTCTGGGAACTGTTAGCTCCCGAGCCTGGATCCCGGCACCAGGCCCTTaGCCTTATGGATGGCCTCAA | + |
Preference number: 4 (lower is better) Translates to: RTGTHSGILGTVSSRAWIPAPGP*PYGWPQ Trigger: TTGAGGCCATCCATAAGGCCAAGGGCCTGGTGCCGG...GATCCAGGCTCGGGAGCTAACAGTTCCCAGAATTCCTGAATGAGTGCCTGTCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS-3UTR CCA 90 bp | CACTCTCCACTCTCCCCTCCCTCTGAATACACACAGCAACACCACCCATGCCTCCTGCAGATACAACAGTaGTGCGGACTGGAGGTGGCA | + |
Preference number: 4 (lower is better) Translates to: HSPLSPPSEYTQQHHPCLLQIQQ*CGLEVA Trigger: TGCCACCTCCAGTCCGCACCACTGTTGTATCTGCAG...GAGGCATGGGTGGTGTTGCTGTGTGTATTCAGAGGGAGGGGAGAGTGGAGAGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS-3UTR TCA 90 bp | AGGACAGGCACTCATTCAGGAATTCTGGGAACTGTTAGCTCCCGAGCCTGGATCGGGGATATTGGTGGCTaGAGATGGAGGTGGTGGCTG | + |
Preference number: 4 (lower is better) Translates to: RTGTHSGILGTVSSRAWIGDIGG*RWRWWL Trigger: CAGCCACCACCTCCATCTTCAGCCACCAATATCCCC...GATCCAGGCTCGGGAGCTAACAGTTCCCAGAATTCCTGAATGAGTGCCTGTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS-3UTR GCA 90 bp | CCCCTCCCTCTGAATACACACAGCAACACCACCCATGCCTCCACAAGACCACAAGCTTGCTGCTGCTGCTaGATAACCTTGGGGATGGCA | + |
Preference number: 4 (lower is better) Translates to: PLPLNTHSNTTHASTRPQACCCC*ITLGMA Trigger: TGCCATCCCCAAGGTTATGCAGCAGCAGCAGCAAGC...TTGTGGTCTTGTGGAGGCATGGGTGGTGTTGCTGTGTGTATTCAGAGGGAGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS-3UTR GCA 90 bp | CCACTCTCCCCTCCCTCTGAATACACACAGCAACACCACCCATGCCTCCACAAGAGCCCAATGCGCATGTaGTCCTGCATTTTGCTGGCA | + |
Preference number: 4 (lower is better) Translates to: PLSPPSEYTQQHHPCLHKSPMRM*SCILLA Trigger: TGCCAGCAAAATGCAGGAGCACATGCGCATTGGGCT...CTTGTGGAGGCATGGGTGGTGTTGCTGTGTGTATTCAGAGGGAGGGGAGAGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS-3UTR GCA 90 bp | CACTCTCCACTCTCCCCTCCCTCTGAATACACACAGCAACACCACCCATGCCTCACCTCATCATCACTCTaGTTCTCTCGGATGGAGCGG | + |
Preference number: 4 (lower is better) Translates to: HSPLSPPSEYTQQHHPCLTSSSL*FSRMER Trigger: CCGCTCCATCCGAGAGAAGCAGAGTGATGATGAGGT...GAGGCATGGGTGGTGTTGCTGTGTGTATTCAGAGGGAGGGGAGAGTGGAGAGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS-3UTR GCA 90 bp | TTCTACCCAGTCACATTCTTGGTCTCATGTCACAGCCTCAGCCATAGAGGCACTCAGCCGGACCACAGATaGCATGGGTGGCCGAGGCAT | + |
Preference number: 4 (lower is better) Translates to: FYPVTFLVSCHSLSHRGTQPDHR*HGWPRH Trigger: ATGCCTCGGCCACCCATGGCATCTGTGGTCCGGCTG...AGTGCCTCTATGGCTGAGGCTGTGACATGAGACCAAGAATGTGACTGGGTAGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS-3UTR GCA 90 bp | CCATACAACAGTACCCCCTCCTCCTCCTGGAAATCCCTCCAGGGGATTTCTGGTCATGATGGGAGGTGCTaGAGGAGGCATAGGTACCAC | + |
Preference number: 4 (lower is better) Translates to: PYNSTPSSSWKSLQGISGHDGRC*RRHRYH Trigger: GTGGTACCTATGCCTCCTGCAGCACCTCCCATCATG...ACCAGAAATCCCCTGGAGGGATTTCCAGGAGGAGGAGGGGGTACTGTTGTATGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS-3UTR CCA 90 bp | CTGTGGTCAATGAGCCTCCAAGTGAATGTGAGTCAGGACAGGCACTCATTCAGGTGCCGACCACTGGCTTaGAAGGGGTGGGATCCTCCT | + |
Preference number: 4 (lower is better) Translates to: LWSMSLQVNVSQDRHSFRCRPLA*KGWDPP Trigger: AGGAGGATCCCACCCCTTCCAAGCCAGTGGTCGGCA...CCTGAATGAGTGCCTGTCCTGACTCACATTCACTTGGAGGCTCATTGACCACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS-3UTR CCA 90 bp | CCACTCTCCCCTCCCTCTGAATACACACAGCAACACCACCCATGCCTCCACAAGAGCTCCCAGTTCCTCTaGTGTTGTTGGGGGTGGAAA | + |
Preference number: 4 (lower is better) Translates to: PLSPPSEYTQQHHPCLHKSSQFL*CCWGWK Trigger: TTTCCACCCCCAACAACACCAGAGGAACTGGGAGCT...CTTGTGGAGGCATGGGTGGTGTTGCTGTGTGTATTCAGAGGGAGGGGAGAGTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS-3UTR CCA 90 bp | AGGACAGGCACTCATTCAGGAATTCTGGGAACTGTTAGCTCCCGAGCCTGGATCGCCTCAATCTGCTCCTaGAGGGTGATGTTGGCCTGG | + |
Preference number: 4 (lower is better) Translates to: RTGTHSGILGTVSSRAWIASICS*RVMLAW Trigger: CCAGGCCAACATCACCCTCCAGGAGCAGATTGAGGC...GATCCAGGCTCGGGAGCTAACAGTTCCCAGAATTCCTGAATGAGTGCCTGTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS-3UTR CCA 90 bp | CCACTCTCCCCTCCCTCTGAATACACACAGCAACACCACCCATGCCTCCACAAGCCGCAGGCATGCCCGTaGCTTCATGAATCTTCACTT | + |
Preference number: 4 (lower is better) Translates to: PLSPPSEYTQQHHPCLHKPQACP*LHESSL Trigger: AAGTGAAGATTCATGAAGCCACGGGCATGCCTGCGG...CTTGTGGAGGCATGGGTGGTGTTGCTGTGTGTATTCAGAGGGAGGGGAGAGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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3UTR CAA 72 bp | CAGGCTGTGCCTGAGGCCCCAGGGACACTCCTGGAATaGGTGGTGCAAAGAGGTACAATGGCAAGGTTTCAA | + |
Preference number: 4 (lower is better) Translates to: QAVPEAPGTLLE*VVQRGTMARFQ Trigger: TTGAAACCTTGCCATTGTACCTCTTTGCACCACCAATTCCAGGAGTGTCCCTGGGGCCTCAGGCACAGCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS-3UTR TCA 90 bp | CCCCTCCCTCTGAATACACACAGCAACACCACCCATGCCTCCACAAGACCACAATCCATGTCCTGTACTTaGGTATCCTGGTCCAGCTGG | + |
Preference number: 4 (lower is better) Translates to: PLPLNTHSNTTHASTRPQSMSCT*VSWSSW Trigger: CCAGCTGGACCAGGATACTCAAGTACAGGACATGGA...TTGTGGTCTTGTGGAGGCATGGGTGGTGTTGCTGTGTGTATTCAGAGGGAGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS-3UTR GCA 90 bp | CACTCTCCACTCTCCCCTCCCTCTGAATACACACAGCAACACCACCCATGCCTCATGCGCATGTGCTCCTaGATTTTGCTGGCAGGAATC | + |
Preference number: 4 (lower is better) Translates to: HSPLSPPSEYTQQHHPCLMRMCS*ILLAGI Trigger: GATTCCTGCCAGCAAAATGCAGGAGCACATGCGCAT...GAGGCATGGGTGGTGTTGCTGTGTGTATTCAGAGGGAGGGGAGAGTGGAGAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS-3UTR GCA 90 bp | GAGGCCCCAGGGACACTCCTGGAATTGGTGGTGCAAAGAGGTACAATGGCAAGGGGATTTCATTGGGCTTaGTGGGGCCAATCTTCTCCT | + |
Preference number: 4 (lower is better) Translates to: EAPGTLLELVVQRGTMARGFHWA*WGQSSP Trigger: AGGAGAAGATTGGCCCCAGCAAGCCCAATGAAATCC...CCTTGCCATTGTACCTCTTTGCACCACCAATTCCAGGAGTGTCCCTGGGGCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS-3UTR CCA 90 bp | AGGACAGGCACTCATTCAGGAATTCTGGGAACTGTTAGCTCCCGAGCCTGGATCCACAATGACTTGGTCTaGTGTTGGGGGCAGAGGTGG | + |
Preference number: 4 (lower is better) Translates to: RTGTHSGILGTVSSRAWIHNDLV*CWGQRW Trigger: CCACCTCTGCCCCCAACACCAGACCAAGTCATTGTG...GATCCAGGCTCGGGAGCTAACAGTTCCCAGAATTCCTGAATGAGTGCCTGTCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS-3UTR CCA 90 bp | CCCCTCCCTCTGAATACACACAGCAACACCACCCATGCCTCCACAAGACCACAATTCCGCACAATGACTTaGTCTGGTGTTGGGGGCAGA | + |
Preference number: 4 (lower is better) Translates to: PLPLNTHSNTTHASTRPQFRTMT*SGVGGR Trigger: TCTGCCCCCAACACCAGACCAAGTCATTGTGCGGAA...TTGTGGTCTTGTGGAGGCATGGGTGGTGTTGCTGTGTGTATTCAGAGGGAGGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS-3UTR CCA 90 bp | CCATACAACAGTACCCCCTCCTCCTCCTGGAAATCCCTCCAGGGGATTTCTGGTGGGGCTTGGAAGCTTTaGGATCATAGTCCTTCCGCA | + |
Preference number: 4 (lower is better) Translates to: PYNSTPSSSWKSLQGISGGAWKL*DHSPSA Trigger: TGCGGAAGGACTATGATCCCAAAGCTTCCAAGCCCC...ACCAGAAATCCCCTGGAGGGATTTCCAGGAGGAGGAGGGGGTACTGTTGTATGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS-3UTR CCA 90 bp | CCCCTCCCTCTGAATACACACAGCAACACCACCCATGCCTCCACAAGACCACAAGCTGAGGGATTTCATTaGGCTTGCTGGGGCCAATCT | + |
Preference number: 4 (lower is better) Translates to: PLPLNTHSNTTHASTRPQAEGFH*ACWGQS Trigger: AGATTGGCCCCAGCAAGCCCAATGAAATCCCTCAGC...TTGTGGTCTTGTGGAGGCATGGGTGGTGTTGCTGTGTGTATTCAGAGGGAGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS-3UTR CCA 90 bp | CCCCTCCCTCTGAATACACACAGCAACACCACCCATGCCTCCACAAGACCACAAAGGCACAAAGGCTGTTaGCACAATCATGGGAGGTGG | + |
Preference number: 4 (lower is better) Translates to: PLPLNTHSNTTHASTRPQRHKGC*HNHGRW Trigger: CCACCTCCCATGATTGTGCCAACAGCCTTTGTGCCT...TTGTGGTCTTGTGGAGGCATGGGTGGTGTTGCTGTGTGTATTCAGAGGGAGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS-3UTR CCA 90 bp | CAGCAACACCACCCATGCCTCCACAAGACCACAACTCCAAAAATAATAACCCACCATTGGAGCTGGGGCTaGGACTGGAGCCACAGGTGG | + |
Preference number: 4 (lower is better) Translates to: QQHHPCLHKTTTPKIITHHWSWG*DWSHRW Trigger: CCACCTGTGGCTCCAGTCCCAGCCCCAGCTCCAATG...GTGGGTTATTATTTTTGGAGTTGTGGTCTTGTGGAGGCATGGGTGGTGTTGCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS-3UTR CCA 90 bp | CCACTCTCCCCTCCCTCTGAATACACACAGCAACACCACCCATGCCTCCACAAGCACTTTGATGGATACTaGACCCTTGTTCCTGCGCAG | + |
Preference number: 4 (lower is better) Translates to: PLSPPSEYTQQHHPCLHKHFDGY*TLVPAQ Trigger: CTGCGCAGGAACAAGGGTCCAGTATCCATCAAAGTG...CTTGTGGAGGCATGGGTGGTGTTGCTGTGTGTATTCAGAGGGAGGGGAGAGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS-3UTR TCA 90 bp | CCCCTCCCTCTGAATACACACAGCAACACCACCCATGCCTCCACAAGACCACAACCTTGCTCATTGGGTTaGAAATCCACTGTCTCCACC | + |
Preference number: 4 (lower is better) Translates to: PLPLNTHSNTTHASTRPQPCSLG*KSTVST Trigger: GGTGGAGACAGTGGATTTTCAACCCAATGAGCAAGG...TTGTGGTCTTGTGGAGGCATGGGTGGTGTTGCTGTGTGTATTCAGAGGGAGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS-3UTR GCA 90 bp | CACTCTCCACTCTCCCCTCCCTCTGAATACACACAGCAACACCACCCATGCCTCCATTCCGTCTTATCCTaGATGTTGGGTACCTGCACT | + |
Preference number: 4 (lower is better) Translates to: HSPLSPPSEYTQQHHPCLHSVLS*MLGTCT Trigger: AGTGCAGGTACCCAACATGCAGGATAAGACGGAATG...GAGGCATGGGTGGTGTTGCTGTGTGTATTCAGAGGGAGGGGAGAGTGGAGAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS-3UTR CCA 90 bp | CTGTGGTCAATGAGCCTCCAAGTGAATGTGAGTCAGGACAGGCACTCATTCAGGGCCATGCTGCCTGAATaGCCATCCCAAGTCACCTTC | + |
Preference number: 4 (lower is better) Translates to: LWSMSLQVNVSQDRHSFRAMLPE*PSQVTF Trigger: GAAGGTGACTTGGGATGGCCATTCAGGCAGCATGGC...CCTGAATGAGTGCCTGTCCTGACTCACATTCACTTGGAGGCTCATTGACCACAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS-3UTR TCA 90 bp | CTGTGGTCAATGAGCCTCCAAGTGAATGTGAGTCAGGACAGGCACTCATTCAGGTCCTCGGCCTTCTCCTaGTCTTCCTCATCTGACTCA | + |
Preference number: 4 (lower is better) Translates to: LWSMSLQVNVSQDRHSFRSSAFS*SSSSDS Trigger: TGAGTCAGATGAGGAAGATCAGGAGAAGGCCGAGGA...CCTGAATGAGTGCCTGTCCTGACTCACATTCACTTGGAGGCTCATTGACCACAG 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS-3UTR GCA 90 bp | GAGGCCCCAGGGACACTCCTGGAATTGGTGGTGCAAAGAGGTACAATGGCAAGGCCAACTGCTTTAAGCTaGTCTCAATATCCAGACCTG | + |
Preference number: 4 (lower is better) Translates to: EAPGTLLELVVQRGTMARPTALS*SQYPDL Trigger: CAGGTCTGGATATTGAGAGCAGCTTAAAGCAGTTGG...CCTTGCCATTGTACCTCTTTGCACCACCAATTCCAGGAGTGTCCCTGGGGCCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS-3UTR CCA 90 bp | TTCTACCCAGTCACATTCTTGGTCTCATGTCACAGCCTCAGCCATAGAGGCACTCTGGCTTGGAAGGGGTaGGATCCTCCTTTGACGATG | + |
Preference number: 4 (lower is better) Translates to: FYPVTFLVSCHSLSHRGTLAWKG*DPPLTM Trigger: CATCGTCAAAGGAGGATCCCACCCCTTCCAAGCCAG...AGTGCCTCTATGGCTGAGGCTGTGACATGAGACCAAGAATGTGACTGGGTAGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS-3UTR CCA 90 bp | CTGTGGTCAATGAGCCTCCAAGTGAATGTGAGTCAGGACAGGCACTCATTCAGGAATAATGCCGACCACTaGCTTGGAAGGGGTGGGATC | + |
Preference number: 4 (lower is better) Translates to: LWSMSLQVNVSQDRHSFRNNADH*LGRGGI Trigger: GATCCCACCCCTTCCAAGCCAGTGGTCGGCATTATT...CCTGAATGAGTGCCTGTCCTGACTCACATTCACTTGGAGGCTCATTGACCACAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS-3UTR CCA 90 bp | AGGACAGGCACTCATTCAGGAATTCTGGGAACTGTTAGCTCCCGAGCCTGGATCTTGAAGAGGCTGTGCTaGGGTCGGAGAAAGTCAAAC | + |
Preference number: 4 (lower is better) Translates to: RTGTHSGILGTVSSRAWILKRLC*GRRKSN Trigger: GTTTGACTTTCTCCGACCCCAGCACAGCCTCTTCAA...GATCCAGGCTCGGGAGCTAACAGTTCCCAGAATTCCTGAATGAGTGCCTGTCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS-3UTR CCA 90 bp | CTGTGGTCAATGAGCCTCCAAGTGAATGTGAGTCAGGACAGGCACTCATTCAGGCCTTGGCCTTATGGATaGCCTCAATCTGCTCCTGGA | + |
Preference number: 4 (lower is better) Translates to: LWSMSLQVNVSQDRHSFRPWPYG*PQSAPG Trigger: TCCAGGAGCAGATTGAGGCCATCCATAAGGCCAAGG...CCTGAATGAGTGCCTGTCCTGACTCACATTCACTTGGAGGCTCATTGACCACAG 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS-3UTR TCA 90 bp | TCTATGGCTACTGCATGGTGGAGGGTCCTGAAGCTTTACAAATATAAAACGTACGCAGCTGAGGGCTCCTaGGCCTTCCCCTCCTTGAAC | + |
Preference number: 4 (lower is better) Translates to: SMATAWWRVLKLYKYKTYAAEGS*AFPSLN Trigger: GTTCAAGGAGGGGAAGGCTCAGGAGCCCTCAGCTGC...GTACGTTTTATATTTGTAAAGCTTCAGGACCCTCCACCATGCAGTAGCCATAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS-3UTR TCA 90 bp | CCATACAACAGTACCCCCTCCTCCTCCTGGAAATCCCTCCAGGGGATTTCTGGTTTCCTCTCACGTTCCTaGAATTTGGCCCATTCTACT | + |
Preference number: 4 (lower is better) Translates to: PYNSTPSSSWKSLQGISGFLSRS*NLAHST Trigger: AGTAGAATGGGCCAAATTTCAGGAACGTGAGAGGAA...ACCAGAAATCCCCTGGAGGGATTTCCAGGAGGAGGAGGGGGTACTGTTGTATGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS-3UTR GCA 90 bp | AGGACAGGCACTCATTCAGGAATTCTGGGAACTGTTAGCTCCCGAGCCTGGATCGGTGGAGGCACTTTCTaGCCTTCTTCTTCATCATCT | + |
Preference number: 4 (lower is better) Translates to: RTGTHSGILGTVSSRAWIGGGTF*PSSSSS Trigger: AGATGATGAAGAAGAAGGGCAGAAAGTGCCTCCACC...GATCCAGGCTCGGGAGCTAACAGTTCCCAGAATTCCTGAATGAGTGCCTGTCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS-3UTR CCA 90 bp | CAATGTGTTCAAAACCAGCCTAACCTATATAGCAAGTTCCAGTGGAGCTATAACGCTGTTTGGACTCAGTaGCTACTGGCGGCGGCGGGG | + |
Preference number: 4 (lower is better) Translates to: QCVQNQPNLYSKFQWSYNAVWTQ*LLAAAG Trigger: CCCCGCCGCCGCCAGTAGCCACTGAGTCCAAACAGC...GTTATAGCTCCACTGGAACTTGCTATATAGGTTAGGCTGGTTTTGAACACATTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS-3UTR CCA 90 bp | CTGTGGTCAATGAGCCTCCAAGTGAATGTGAGTCAGGACAGGCACTCATTCAGGCTTCAATTGGCTGTTTaGACTCAGTGGCTACTGGCG | + |
Preference number: 4 (lower is better) Translates to: LWSMSLQVNVSQDRHSFRLQLAV*TQWLLA Trigger: CGCCAGTAGCCACTGAGTCCAAACAGCCAATTGAAG...CCTGAATGAGTGCCTGTCCTGACTCACATTCACTTGGAGGCTCATTGACCACAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS-3UTR CCA 90 bp | TTCTACCCAGTCACATTCTTGGTCTCATGTCACAGCCTCAGCCATAGAGGCACTACTGACGCCCATTCCTaGCCACAAACTGAGCTGTCA | + |
Preference number: 4 (lower is better) Translates to: FYPVTFLVSCHSLSHRGTTDAHS*PQTELS Trigger: TGACAGCTCAGTTTGTGGCCAGGAATGGGCGTCAGT...AGTGCCTCTATGGCTGAGGCTGTGACATGAGACCAAGAATGTGACTGGGTAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS-3UTR CCA 90 bp | CTTTCAGCACATGCAGTCCTCCAAAAAGAAACCAGCTTTGTTTACAGCTTATCAAGGGTGATGTTGGCCTaGGCAGCCTGCTGGGTCCGG | + |
Preference number: 4 (lower is better) Translates to: LSAHAVLQKETSFVYSLSRVMLA*AACWVR Trigger: CCGGACCCAGCAGGCTGCCCAGGCCAACATCACCCT...TGATAAGCTGTAAACAAAGCTGGTTTCTTTTTGGAGGACTGCATGTGCTGAAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS-3UTR CCA 90 bp | TTCTACCCAGTCACATTCTTGGTCTCATGTCACAGCCTCAGCCATAGAGGCACTAGCTGGGGATATTGGTaGCTGAAGATGGAGGTGGTG | + |
Preference number: 4 (lower is better) Translates to: FYPVTFLVSCHSLSHRGTSWGYW*LKMEVV Trigger: CACCACCTCCATCTTCAGCCACCAATATCCCCAGCT...AGTGCCTCTATGGCTGAGGCTGTGACATGAGACCAAGAATGTGACTGGGTAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS-3UTR CCA 90 bp | GCACATGCAGTCCTCCAAAAAGAAACCAGCTTTGTTTACAGCTTATCAACACACCACAATCATGGGAGGTaGGCGGGGCGCCATGATGGG | + |
Preference number: 4 (lower is better) Translates to: AHAVLQKETSFVYSLSTHHNHGR*AGRHDG Trigger: CCCATCATGGCGCCCCGCCCACCTCCCATGATTGTG...GTGTGTTGATAAGCTGTAAACAAAGCTGGTTTCTTTTTGGAGGACTGCATGTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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3UTR CAA 72 bp | GCTACACAAGTGCTTCAACAGGAAGCAGTGTCAAGCTaGCCGGTCCATGCCTTTAATTCCAGCACTTGGGAG | + |
Preference number: 4 (lower is better) Translates to: ATQVLQQEAVSS*PVHAFNSSTWE Trigger: CTCCCAAGTGCTGGAATTAAAGGCATGGACCGGCAAGCTTGACACTGCTTCCTGTTGAAGCACTTGTGTAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS-3UTR GCA 90 bp | CCCCTCCCTCTGAATACACACAGCAACACCACCCATGCCTCCACAAGACCACAAAAGATCTTGGTATACTaGTCCACCAGCTTTGTGAAG | + |
Preference number: 4 (lower is better) Translates to: PLPLNTHSNTTHASTRPQKILVY*STSFVK Trigger: CTTCACAAAGCTGGTGGAGCAGTATACCAAGATCTT...TTGTGGTCTTGTGGAGGCATGGGTGGTGTTGCTGTGTGTATTCAGAGGGAGGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS-3UTR CCA 90 bp | CTGTGGTCAATGAGCCTCCAAGTGAATGTGAGTCAGGACAGGCACTCATTCAGGTTCTGGCCACAAAACTaGCAGTCTTGTCGACGATGT | + |
Preference number: 4 (lower is better) Translates to: LWSMSLQVNVSQDRHSFRFWPQN*QSCRRC Trigger: ACATCGTCGACAAGACTGCCAGTTTTGTGGCCAGAA...CCTGAATGAGTGCCTGTCCTGACTCACATTCACTTGGAGGCTCATTGACCACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS-3UTR CCA 90 bp | CTGTGGTCAATGAGCCTCCAAGTGAATGTGAGTCAGGACAGGCACTCATTCAGGATTCAGGCCCATTTCTaGCCACAAAACTGGCAGTCT | + |
Preference number: 4 (lower is better) Translates to: LWSMSLQVNVSQDRHSFRIQAHF*PQNWQS Trigger: AGACTGCCAGTTTTGTGGCCAGAAATGGGCCTGAAT...CCTGAATGAGTGCCTGTCCTGACTCACATTCACTTGGAGGCTCATTGACCACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS-3UTR CCA 90 bp | CAGCAACACCACCCATGCCTCCACAAGACCACAACTCCAAAAATAATAACCCACGGTACTATGGTCTCTTaGATCACCTGGGCTTGGACC | + |
Preference number: 4 (lower is better) Translates to: QQHHPCLHKTTTPKIITHGTMVS*ITWAWT Trigger: GGTCCAAGCCCAGGTGATCCAAGAGACCATAGTACC...GTGGGTTATTATTTTTGGAGTTGTGGTCTTGTGGAGGCATGGGTGGTGTTGCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS-3UTR CCA 90 bp | GCACATGCAGTCCTCCAAAAAGAAACCAGCTTTGTTTACAGCTTATCAACACACTCTGCTTCTCTCGGATaGAGCGGTCCCGCTGCTCCA | + |
Preference number: 4 (lower is better) Translates to: AHAVLQKETSFVYSLSTHSASLG*SGPAAP Trigger: TGGAGCAGCGGGACCGCTCCATCCGAGAGAAGCAGA...GTGTGTTGATAAGCTGTAAACAAAGCTGGTTTCTTTTTGGAGGACTGCATGTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS-3UTR TCA 90 bp | TTCTACCCAGTCACATTCTTGGTCTCATGTCACAGCCTCAGCCATAGAGGCACTGGTGGGATCCTCCTTTaGCGATGCTTCTTCTTCAAT | + |
Preference number: 4 (lower is better) Translates to: FYPVTFLVSCHSLSHRGTGGILL*RCFFFN Trigger: ATTGAAGAAGAAGCATCGTCAAAGGAGGATCCCACC...AGTGCCTCTATGGCTGAGGCTGTGACATGAGACCAAGAATGTGACTGGGTAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS-3UTR TCA 90 bp | CAGCAACACCACCCATGCCTCCACAAGACCACAACTCCAAAAATAATAACCCACTTCCTGGCCACAAACTaGGCTGTCAGCTTCACTACA | + |
Preference number: 4 (lower is better) Translates to: QQHHPCLHKTTTPKIITHFLATN*AVSFTT Trigger: TGTAGTGAAGCTGACAGCTCAGTTTGTGGCCAGGAA...GTGGGTTATTATTTTTGGAGTTGTGGTCTTGTGGAGGCATGGGTGGTGTTGCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS-3UTR GCA 90 bp | TTCTACCCAGTCACATTCTTGGTCTCATGTCACAGCCTCAGCCATAGAGGCACTCGTCGCTCAGCCAACTaGTTTAAGCTGCTCTCAATA | + |
Preference number: 4 (lower is better) Translates to: FYPVTFLVSCHSLSHRGTRRSAN*FKLLSI Trigger: TATTGAGAGCAGCTTAAAGCAGTTGGCTGAGCGACG...AGTGCCTCTATGGCTGAGGCTGTGACATGAGACCAAGAATGTGACTGGGTAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS-3UTR CCA 90 bp | CTGTGGTCAATGAGCCTCCAAGTGAATGTGAGTCAGGACAGGCACTCATTCAGGTGGTGTTGTTGGGGGTaGAAAGTTTCCTTGCTCATT | + |
Preference number: 4 (lower is better) Translates to: LWSMSLQVNVSQDRHSFRWCCWG*KVSLLI Trigger: AATGAGCAAGGAAACTTTCCACCCCCAACAACACCA...CCTGAATGAGTGCCTGTCCTGACTCACATTCACTTGGAGGCTCATTGACCACAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS-3UTR CCA 90 bp | TCTATGGCTACTGCATGGTGGAGGGTCCTGAAGCTTTACAAATATAAAACGTACGACTTGGTCTGGTGTTaGGGGCAGAGGTGGAGGCAT | + |
Preference number: 4 (lower is better) Translates to: SMATAWWRVLKLYKYKTYDLVWC*GQRWRH Trigger: ATGCCTCCACCTCTGCCCCCAACACCAGACCAAGTC...GTACGTTTTATATTTGTAAAGCTTCAGGACCCTCCACCATGCAGTAGCCATAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS-3UTR CCA 90 bp | GCACATGCAGTCCTCCAAAAAGAAACCAGCTTTGTTTACAGCTTATCAACACACCACAGATGCCATGGGTaGCCGAGGCATGACAGGTAC | + |
Preference number: 4 (lower is better) Translates to: AHAVLQKETSFVYSLSTHHRCHG*PRHDRY Trigger: GTACCTGTCATGCCTCGGCCACCCATGGCATCTGTG...GTGTGTTGATAAGCTGTAAACAAAGCTGGTTTCTTTTTGGAGGACTGCATGTGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS-3UTR CCA 90 bp | CTTTCAGCACATGCAGTCCTCCAAAAAGAAACCAGCTTTGTTTACAGCTTATCAGACTGGAGCCACAGGTaGGGCAGGCACAAAGGCTGT | + |
Preference number: 4 (lower is better) Translates to: LSAHAVLQKETSFVYSLSDWSHR*GRHKGC Trigger: ACAGCCTTTGTGCCTGCCCCACCTGTGGCTCCAGTC...TGATAAGCTGTAAACAAAGCTGGTTTCTTTTTGGAGGACTGCATGTGCTGAAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS-3UTR CCA 90 bp | TCTATGGCTACTGCATGGTGGAGGGTCCTGAAGCTTTACAAATATAAAACGTACGACCTGGTCTGTGAGTaGGAGAGTGAAGACCAGCCC | + |
Preference number: 4 (lower is better) Translates to: SMATAWWRVLKLYKYKTYDLVCE*ESEDQP Trigger: GGGCTGGTCTTCACTCTCCCACTCACAGACCAGGTC...GTACGTTTTATATTTGTAAAGCTTCAGGACCCTCCACCATGCAGTAGCCATAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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3UTR CAA 72 bp | GGACAGCAGTTAGTGACCAAGAGCGAGGCACATGTTTaGGATTTACTCTTCATCTCTGAGCCATGGGATGGA | + |
Preference number: 4 (lower is better) Translates to: GQQLVTKSEAHV*DLLFISEPWDG Trigger: TCCATCCCATGGCTCAGAGATGAAGAGTAAATCCAAAACATGTGCCTCGCTCTTGGTCACTAACTGCTGTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS-3UTR TCA 90 bp | CTTTCAGCACATGCAGTCCTCCAAAAAGAAACCAGCTTTGTTTACAGCTTATCAAGCTGGGTCAGAAACTaGCGCCCATTCCTGGCCACA | + |
Preference number: 4 (lower is better) Translates to: LSAHAVLQKETSFVYSLSSWVRN*RPFLAT Trigger: TGTGGCCAGGAATGGGCGTCAGTTTCTGACCCAGCT...TGATAAGCTGTAAACAAAGCTGGTTTCTTTTTGGAGGACTGCATGTGCTGAAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS-3UTR TCA 90 bp | CTTTCAGCACATGCAGTCCTCCAAAAAGAAACCAGCTTTGTTTACAGCTTATCACGTAGCGCTCCTGAATaGGGATCCGAGCTCCCAGTT | + |
Preference number: 4 (lower is better) Translates to: LSAHAVLQKETSFVYSLSRSAPE*GSELPV Trigger: AACTGGGAGCTCGGATCCTCATTCAGGAGCGCTACG...TGATAAGCTGTAAACAAAGCTGGTTTCTTTTTGGAGGACTGCATGTGCTGAAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS-3UTR GCA 90 bp | TTCTACCCAGTCACATTCTTGGTCTCATGTCACAGCCTCAGCCATAGAGGCACTTGCATGTTGGGTACCTaGACTTTGATGGATACTGGA | + |
Preference number: 4 (lower is better) Translates to: FYPVTFLVSCHSLSHRGTCMLGT*TLMDTG Trigger: TCCAGTATCCATCAAAGTGCAGGTACCCAACATGCA...AGTGCCTCTATGGCTGAGGCTGTGACATGAGACCAAGAATGTGACTGGGTAGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS-3UTR CCA 90 bp | CAATGTGTTCAAAACCAGCCTAACCTATATAGCAAGTTCCAGTGGAGCTATAACGTCTCTTGGATCACCTaGGCTTGGACCTTCTGGGGC | + |
Preference number: 4 (lower is better) Translates to: QCVQNQPNLYSKFQWSYNVSWIT*AWTFWG Trigger: GCCCCAGAAGGTCCAAGCCCAGGTGATCCAAGAGAC...GTTATAGCTCCACTGGAACTTGCTATATAGGTTAGGCTGGTTTTGAACACATTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS-3UTR CCA 90 bp | CTGTGGTCAATGAGCCTCCAAGTGAATGTGAGTCAGGACAGGCACTCATTCAGGCAATCTTCTTACCAATaGCTGTCTCTTCTACCCCAA | + |
Preference number: 4 (lower is better) Translates to: LWSMSLQVNVSQDRHSFRQSSYQ*LSLLPQ Trigger: TTGGGGTAGAAGAGACAGCCATTGGTAAGAAGATTG...CCTGAATGAGTGCCTGTCCTGACTCACATTCACTTGGAGGCTCATTGACCACAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS-3UTR TCA 90 bp | CTTTCAGCACATGCAGTCCTCCAAAAAGAAACCAGCTTTGTTTACAGCTTATCAGTGAAGACCAGCCCCTaGCCATTCAGCTTCCATTCC | + |
Preference number: 4 (lower is better) Translates to: LSAHAVLQKETSFVYSLSVKTSP*PFSFHS Trigger: GGAATGGAAGCTGAATGGTCAGGGGCTGGTCTTCAC...TGATAAGCTGTAAACAAAGCTGGTTTCTTTTTGGAGGACTGCATGTGCTGAAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS-3UTR GCA 90 bp | GCACATGCAGTCCTCCAAAAAGAAACCAGCTTTGTTTACAGCTTATCAACACACTGGATGGCCTCAATCTaGTCCTGGAGGGTGATGTTG | + |
Preference number: 4 (lower is better) Translates to: AHAVLQKETSFVYSLSTHWMASI*SWRVML Trigger: CAACATCACCCTCCAGGAGCAGATTGAGGCCATCCA...GTGTGTTGATAAGCTGTAAACAAAGCTGGTTTCTTTTTGGAGGACTGCATGTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS-3UTR GCA 90 bp | TCTATGGCTACTGCATGGTGGAGGGTCCTGAAGCTTTACAAATATAAAACGTACCACATTGATCCTGGGTaGGTGGATGATGGGTGGCAT | + |
Preference number: 4 (lower is better) Translates to: SMATAWWRVLKLYKYKTYHIDPG*VDDGWH Trigger: ATGCCACCCATCATCCACGCACCCAGGATCAATGTG...GTACGTTTTATATTTGTAAAGCTTCAGGACCCTCCACCATGCAGTAGCCATAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS-3UTR CCA 90 bp | CAATGTGTTCAAAACCAGCCTAACCTATATAGCAAGTTCCAGTGGAGCTATAACAGGCCCTTGGCCTTATaGATGGCCTCAATCTGCTCC | + |
Preference number: 4 (lower is better) Translates to: QCVQNQPNLYSKFQWSYNRPLAL*MASICS Trigger: GGAGCAGATTGAGGCCATCCATAAGGCCAAGGGCCT...GTTATAGCTCCACTGGAACTTGCTATATAGGTTAGGCTGGTTTTGAACACATTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS-3UTR CCA 90 bp | CTTTCAGCACATGCAGTCCTCCAAAAAGAAACCAGCTTTGTTTACAGCTTATCAATCCTCCATAGGAGGTaGGGGGTGTACAGGAGGCAT | + |
Preference number: 4 (lower is better) Translates to: LSAHAVLQKETSFVYSLSILHRR*GVYRRH Trigger: ATGCCTCCTGTACACCCCCCACCTCCTATGGAGGAT...TGATAAGCTGTAAACAAAGCTGGTTTCTTTTTGGAGGACTGCATGTGCTGAAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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3UTR CAA 72 bp | AGAATTGAAACAAGATATTCATTCCGTAGACTGGCTTaGAGGGAAACAAATGCCCAGGCTGTGCCTGAGGCC | + |
Preference number: 4 (lower is better) Translates to: RIETRYSFRRLA*RETNAQAVPEA Trigger: GGCCTCAGGCACAGCCTGGGCATTTGTTTCCCTCAAAGCCAGTCTACGGAATGAATATCTTGTTTCAATTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS-3UTR CCA 90 bp | CAGCAACACCACCCATGCCTCCACAAGACCACAACTCCAAAAATAATAACCCACCTCAATATCCAGACCTaGTGCATAAACCTCATCATC | + |
Preference number: 4 (lower is better) Translates to: QQHHPCLHKTTTPKIITHLNIQT*CINLII Trigger: GATGATGAGGTTTATGCACCAGGTCTGGATATTGAG...GTGGGTTATTATTTTTGGAGTTGTGGTCTTGTGGAGGCATGGGTGGTGTTGCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS-3UTR CCA 90 bp | GCACATGCAGTCCTCCAAAAAGAAACCAGCTTTGTTTACAGCTTATCAACACACCGGTCTTTAGTTTCTTaGATGGAGGCTCATCCTCCA | + |
Preference number: 4 (lower is better) Translates to: AHAVLQKETSFVYSLSTHRSLVS*MEAHPP Trigger: TGGAGGATGAGCCTCCATCCAAGAAACTAAAGACCG...GTGTGTTGATAAGCTGTAAACAAAGCTGGTTTCTTTTTGGAGGACTGCATGTGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS-3UTR TCA 90 bp | CAATGTGTTCAAAACCAGCCTAACCTATATAGCAAGTTCCAGTGGAGCTATAACGAATCTTCTCCCCAGTaGTGGGGGATACAAGATACT | + |
Preference number: 4 (lower is better) Translates to: QCVQNQPNLYSKFQWSYNESSPQ*WGIQDT Trigger: AGTATCTTGTATCCCCCATCACTGGGGAGAAGATTC...GTTATAGCTCCACTGGAACTTGCTATATAGGTTAGGCTGGTTTTGAACACATTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS-3UTR GCA 90 bp | GCACATGCAGTCCTCCAAAAAGAAACCAGCTTTGTTTACAGCTTATCAACACACAGTCAAACTGGTAGTTaGGCTGCTCTTTCTGCATCA | + |
Preference number: 4 (lower is better) Translates to: AHAVLQKETSFVYSLSTHSQTGS*AALSAS Trigger: TGATGCAGAAAGAGCAGCGCAACTACCAGTTTGACT...GTGTGTTGATAAGCTGTAAACAAAGCTGGTTTCTTTTTGGAGGACTGCATGTGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS-3UTR TCA 90 bp | CAATGTGTTCAAAACCAGCCTAACCTATATAGCAAGTTCCAGTGGAGCTATAACATGCCCGTGGCTTCATaGATCTTCACTTTGATGACA | + |
Preference number: 4 (lower is better) Translates to: QCVQNQPNLYSKFQWSYNMPVAS*IFTLMT Trigger: TGTCATCAAAGTGAAGATTCATGAAGCCACGGGCAT...GTTATAGCTCCACTGGAACTTGCTATATAGGTTAGGCTGGTTTTGAACACATTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS TCA 90 bp | ATTGATCCTGGGTGCGTGGATGATGGGTGGCATGGGGGCAATCACTaGGCCTGGGGGCAGCCGGACCACAGATGCCATGGGTGGCCGAGG | + |
Preference number: 5 (lower is better) Translates to: IDPGCVDDGWHGGNH*AWGQPDHRCHGWPR Trigger: CCTCGGCCACCCATGGCATCTGTGGTCCGGCTGCCCCCAGGCTCAGTGATTGCCCCCATGCCACCCATCATCCACGCACCCAGGATCAAT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS TCA 90 bp | AGCCTGGGGGCAGCCGGACCACAGATGCCATGGGTGGCCGAGGCATaGCAGGTACTGCAGATACAACAGTGGTGCGGACTGGAGGTGGCA | + |
Preference number: 5 (lower is better) Translates to: SLGAAGPQMPWVAEA*QVLQIQQWCGLEVA Trigger: TGCCACCTCCAGTCCGCACCACTGTTGTATCTGCAGTACCTGTCATGCCTCGGCCACCCATGGCATCTGTGGTCCGGCTGCCCCCAGGCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS GCA 90 bp | ATGGCCTCAATCTGCTCCTGGAGGGTGATGTTGGCCTGGGCAGCCTaGTGGGTCCGGGCCATGCTGCCTGAATGGCCATCCCAAGTCACC | + |
Preference number: 5 (lower is better) Translates to: MASICSWRVMLAWAA*WVRAMLPEWPSQVT Trigger: GGTGACTTGGGATGGCCATTCAGGCAGCATGGCCCGGACCCAGCAGGCTGCCCAGGCCAACATCACCCTCCAGGAGCAGATTGAGGCCAT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS GCA 90 bp | TCATCTTCCGGCACCAGGCCCTTGGCCTTATGGATGGCCTCAATCTaGTCCTGGAGGGTGATGTTGGCCTGGGCAGCCTGCTGGGTCCGG | + |
Preference number: 5 (lower is better) Translates to: SSSGTRPLALWMASI*SWRVMLAWAACWVR Trigger: CCGGACCCAGCAGGCTGCCCAGGCCAACATCACCCTCCAGGAGCAGATTGAGGCCATCCATAAGGCCAAGGGCCTGGTGCCGGAAGATGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS CCA 90 bp | GCCTCAATCTGCTCCTGGAGGGTGATGTTGGCCTGGGCAGCCTGCTaGGTCCGGGCCATGCTGCCTGAATGGCCATCCCAAGTCACCTTC | + |
Preference number: 5 (lower is better) Translates to: ASICSWRVMLAWAAC*VRAMLPEWPSQVTF Trigger: GAAGGTGACTTGGGATGGCCATTCAGGCAGCATGGCCCGGACCCAGCAGGCTGCCCAGGCCAACATCACCCTCCAGGAGCAGATTGAGGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS CCA 90 bp | GCCTTATGGATGGCCTCAATCTGCTCCTGGAGGGTGATGTTGGCCTaGGCAGCCTGCTGGGTCCGGGCCATGCTGCCTGAATGGCCATCC | + |
Preference number: 5 (lower is better) Translates to: ALWMASICSWRVMLA*AACWVRAMLPEWPS Trigger: GGATGGCCATTCAGGCAGCATGGCCCGGACCCAGCAGGCTGCCCAGGCCAACATCACCCTCCAGGAGCAGATTGAGGCCATCCATAAGGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS GCA 90 bp | CAGCCGGACCACAGATGCCATGGGTGGCCGAGGCATGACAGGTACTaGAGATACAACAGTGGTGCGGACTGGAGGTGGCATCGCAGGTGG | + |
Preference number: 5 (lower is better) Translates to: QPDHRCHGWPRHDRY*RYNSGADWRWHRRW Trigger: CCACCTGCGATGCCACCTCCAGTCCGCACCACTGTTGTATCTGCAGTACCTGTCATGCCTCGGCCACCCATGGCATCTGTGGTCCGGCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS GCA 90 bp | TGGCACAATCATGGGAGGTGGGCGGGGCGCCATGATGGGAGGTGCTaGAGGAGGCATAGGTACCACATTGATCCTGGGTGCGTGGATGAT | + |
Preference number: 5 (lower is better) Translates to: WHNHGRWAGRHDGRC*RRHRYHIDPGCVDD Trigger: ATCATCCACGCACCCAGGATCAATGTGGTACCTATGCCTCCTGCAGCACCTCCCATCATGGCGCCCCGCCCACCTCCCATGATTGTGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS GCA 90 bp | TGTTGGCACAATCATGGGAGGTGGGCGGGGCGCCATGATGGGAGGTaGTGCAGGAGGCATAGGTACCACATTGATCCTGGGTGCGTGGAT | + |
Preference number: 5 (lower is better) Translates to: CWHNHGRWAGRHDGR*CRRHRYHIDPGCVD Trigger: ATCCACGCACCCAGGATCAATGTGGTACCTATGCCTCCTGCAGCACCTCCCATCATGGCGCCCCGCCCACCTCCCATGATTGTGCCAACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS CCA 90 bp | CCAGACCTGGTGCATAAACCTCATCATCACTCTGCTTCTCTCGGATaGAGCGGTCCCGCTGCTCCAGCCAGCGGGGGTCAAGAAGCCCAA | + |
Preference number: 5 (lower is better) Translates to: PDLVHKPHHHSASLG*SGPAAPASGGQEAQ Trigger: TTGGGCTTCTTGACCCCCGCTGGCTGGAGCAGCGGGACCGCTCCATCCGAGAGAAGCAGAGTGATGATGAGGTTTATGCACCAGGTCTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS GCA 90 bp | GTCTCTTGGATCACCTGGGCTTGGACCTTCTGGGGCAGCTGCTGTTaGGTAGCTTGCTGCTGCTGCTGCATAACCTTGGGGATGGCAGCT | + |
Preference number: 5 (lower is better) Translates to: VSWITWAWTFWGSCC*VACCCCCITLGMAA Trigger: AGCTGCCATCCCCAAGGTTATGCAGCAGCAGCAGCAAGCTACGCAACAGCAGCTGCCCCAGAAGGTCCAAGCCCAGGTGATCCAAGAGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS-3UTR CAA 90 bp | GAGGCCCCAGGGACACTCCTGGAATTGGTGGTGCAAAGAGGTACAATGGCAAGGTGCTGCTGCATAACCTaGGGGATGGCAGCTGAGGGC | + |
Preference number: 5 (lower is better) Translates to: EAPGTLLELVVQRGTMARCCCIT*GMAAEG Trigger: GCCCTCAGCTGCCATCCCCAAGGTTATGCAGCAGCA...CCTTGCCATTGTACCTCTTTGCACCACCAATTCCAGGAGTGTCCCTGGGGCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS TCA 90 bp | TCTCCACTTCCTCGCTCTCCCCAAACTTCTCGTAGCGCTCCTGAATaGGGATCCGAGCTCCCAGTTCCTCTGGTGTTGTTGGGGGTGGAA | + |
Preference number: 5 (lower is better) Translates to: SPLPRSPQTSRSAPE*GSELPVPLVLLGVE Trigger: TTCCACCCCCAACAACACCAGAGGAACTGGGAGCTCGGATCCTCATTCAGGAGCGCTACGAGAAGTTTGGGGAGAGCGAGGAAGTGGAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS CCA 90 bp | TCCTTCGGTACTATGGTCTCTTGGATCACCTGGGCTTGGACCTTCTaGGGCAGCTGCTGTTGCGTAGCTTGCTGCTGCTGCTGCATAACC | + |
Preference number: 5 (lower is better) Translates to: SFGTMVSWITWAWTF*GSCCCVACCCCCIT Trigger: GGTTATGCAGCAGCAGCAGCAAGCTACGCAACAGCAGCTGCCCCAGAAGGTCCAAGCCCAGGTGATCCAAGAGACCATAGTACCGAAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS CCA 90 bp | ATCTTCTCCTTAGTGTCATCTTCCGGCACCAGGCCCTTGGCCTTATaGATGGCCTCAATCTGCTCCTGGAGGGTGATGTTGGCCTGGGCA | + |
Preference number: 5 (lower is better) Translates to: IFSLVSSSGTRPLAL*MASICSWRVMLAWA Trigger: TGCCCAGGCCAACATCACCCTCCAGGAGCAGATTGAGGCCATCCATAAGGCCAAGGGCCTGGTGCCGGAAGATGACACTAAGGAGAAGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS-3UTR CAA 90 bp | CTGTGGTCAATGAGCCTCCAAGTGAATGTGAGTCAGGACAGGCACTCATTCAGGCTGGGGCAGCTGCTGTaGCGTAGCTTGCTGCTGCTG | + |
Preference number: 5 (lower is better) Translates to: LWSMSLQVNVSQDRHSFRLGQLL*RSLLLL Trigger: CAGCAGCAGCAAGCTACGCAACAGCAGCTGCCCCAG...CCTGAATGAGTGCCTGTCCTGACTCACATTCACTTGGAGGCTCATTGACCACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS-3UTR CAA 90 bp | CCACTCTCCCCTCCCTCTGAATACACACAGCAACACCACCCATGCCTCCACAAGCGGTACTATGGTCTCTaGGATCACCTGGGCTTGGAC | + |
Preference number: 5 (lower is better) Translates to: PLSPPSEYTQQHHPCLHKRYYGL*DHLGLD Trigger: GTCCAAGCCCAGGTGATCCAAGAGACCATAGTACCG...CTTGTGGAGGCATGGGTGGTGTTGCTGTGTGTATTCAGAGGGAGGGGAGAGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS-3UTR CAA 90 bp | CCACTCTCCCCTCCCTCTGAATACACACAGCAACACCACCCATGCCTCCACAAGGGGATTTCATTGGGCTaGCTGGGGCCAATCTTCTCC | + |
Preference number: 5 (lower is better) Translates to: PLSPPSEYTQQHHPCLHKGISLG*LGPIFS Trigger: GGAGAAGATTGGCCCCAGCAAGCCCAATGAAATCCC...CTTGTGGAGGCATGGGTGGTGTTGCTGTGTGTATTCAGAGGGAGGGGAGAGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS CCA 90 bp | ATGAACTCAAACTCAGGAGGGGGCTCCTTCGGTACTATGGTCTCTTaGATCACCTGGGCTTGGACCTTCTGGGGCAGCTGCTGTTGCGTA | + |
Preference number: 5 (lower is better) Translates to: MNSNSGGGSFGTMVS*ITWAWTFWGSCCCV Trigger: TACGCAACAGCAGCTGCCCCAGAAGGTCCAAGCCCAGGTGATCCAAGAGACCATAGTACCGAAGGAGCCCCCTCCTGAGTTTGAGTTCAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS-3UTR CAA 90 bp | TTCTACCCAGTCACATTCTTGGTCTCATGTCACAGCCTCAGCCATAGAGGCACTATGCCGACCACTGGCTaGGAAGGGGTGGGATCCTCC | + |
Preference number: 5 (lower is better) Translates to: FYPVTFLVSCHSLSHRGTMPTTG*EGVGSS Trigger: GGAGGATCCCACCCCTTCCAAGCCAGTGGTCGGCAT...AGTGCCTCTATGGCTGAGGCTGTGACATGAGACCAAGAATGTGACTGGGTAGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS-3UTR CAA 90 bp | CACTCTCCACTCTCCCCTCCCTCTGAATACACACAGCAACACCACCCATGCCTCCCAGTTCCTCTGGTGTaGTTGGGGGTGGAAAGTTTC | + |
Preference number: 5 (lower is better) Translates to: HSPLSPPSEYTQQHHPCLPVPLV*LGVESF Trigger: GAAACTTTCCACCCCCAACAACACCAGAGGAACTGG...GAGGCATGGGTGGTGTTGCTGTGTGTATTCAGAGGGAGGGGAGAGTGGAGAGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS-3UTR CAA 90 bp | CCATACAACAGTACCCCCTCCTCCTCCTGGAAATCCCTCCAGGGGATTTCTGGTGCTGAGCTGGGGATATaGGTGGCTGAAGATGGAGGT | + |
Preference number: 5 (lower is better) Translates to: PYNSTPSSSWKSLQGISGAELGI*VAEDGG Trigger: ACCTCCATCTTCAGCCACCAATATCCCCAGCTCAGC...ACCAGAAATCCCCTGGAGGGATTTCCAGGAGGAGGAGGGGGTACTGTTGTATGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS CCA 90 bp | GCTGCTCTTTCTGCATCAGCTGGGTCAGAAACTGACGCCCATTCCTaGCCACAAACTGAGCTGTCAGCTTCACTACATCCAGGTCGAAGG | + |
Preference number: 5 (lower is better) Translates to: AALSASAGSETDAHS*PQTELSASLHPGRR Trigger: CCTTCGACCTGGATGTAGTGAAGCTGACAGCTCAGTTTGTGGCCAGGAATGGGCGTCAGTTTCTGACCCAGCTGATGCAGAAAGAGCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS-3UTR CAA 90 bp | GAGGCCCCAGGGACACTCCTGGAATTGGTGGTGCAAAGAGGTACAATGGCAAGGATCCATGTCCTGTACTaGAGTATCCTGGTCCAGCTG | + |
Preference number: 5 (lower is better) Translates to: EAPGTLLELVVQRGTMARIHVLY*SILVQL Trigger: CAGCTGGACCAGGATACTCAAGTACAGGACATGGAT...CCTTGCCATTGTACCTCTTTGCACCACCAATTCCAGGAGTGTCCCTGGGGCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS-3UTR CAA 90 bp | CTGTGGTCAATGAGCCTCCAAGTGAATGTGAGTCAGGACAGGCACTCATTCAGGCTTCCGCACAATGACTaGGTCTGGTGTTGGGGGCAG | + |
Preference number: 5 (lower is better) Translates to: LWSMSLQVNVSQDRHSFRLPHND*VWCWGQ Trigger: CTGCCCCCAACACCAGACCAAGTCATTGTGCGGAAG...CCTGAATGAGTGCCTGTCCTGACTCACATTCACTTGGAGGCTCATTGACCACAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS-3UTR CAA 90 bp | CCACTCTCCCCTCCCTCTGAATACACACAGCAACACCACCCATGCCTCCACAAGATGTGCTCCTGCATTTaGCTGGCAGGAATCTTCTCC | + |
Preference number: 5 (lower is better) Translates to: PLSPPSEYTQQHHPCLHKMCSCI*LAGIFS Trigger: GGAGAAGATTCCTGCCAGCAAAATGCAGGAGCACAT...CTTGTGGAGGCATGGGTGGTGTTGCTGTGTGTATTCAGAGGGAGGGGAGAGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS TCA 90 bp | ATGACAGAGACCTGGTCTGTGAGTGGGAGAGTGAAGACCAGCCCCTaGCCATTCAGCTTCCATTCCGTCTTATCCTGCATGTTGGGTACC | + |
Preference number: 5 (lower is better) Translates to: MTETWSVSGRVKTSP*PFSFHSVLSCMLGT Trigger: GGTACCCAACATGCAGGATAAGACGGAATGGAAGCTGAATGGTCAGGGGCTGGTCTTCACTCTCCCACTCACAGACCAGGTCTCTGTCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS-3UTR CAA 90 bp | CACTCTCCACTCTCCCCTCCCTCTGAATACACACAGCAACACCACCCATGCCTCTCCTTGCTCATTGGGTaGAAAATCCACTGTCTCCAC | + |
Preference number: 5 (lower is better) Translates to: HSPLSPPSEYTQQHHPCLSLLIG*KIHCLH Trigger: GTGGAGACAGTGGATTTTCAACCCAATGAGCAAGGA...GAGGCATGGGTGGTGTTGCTGTGTGTATTCAGAGGGAGGGGAGAGTGGAGAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS-3UTR CAA 90 bp | CCCCTCCCTCTGAATACACACAGCAACACCACCCATGCCTCCACAAGACCACAAGTTCCTCTGGTGTTGTaGGGGGTGGAAAGTTTCCTT | + |
Preference number: 5 (lower is better) Translates to: PLPLNTHSNTTHASTRPQVPLVL*GVESFL Trigger: AAGGAAACTTTCCACCCCCAACAACACCAGAGGAAC...TTGTGGTCTTGTGGAGGCATGGGTGGTGTTGCTGTGTGTATTCAGAGGGAGGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS-3UTR CAA 90 bp | CCATACAACAGTACCCCCTCCTCCTCCTGGAAATCCCTCCAGGGGATTTCTGGTTTGGGTACCTGCACTTaGATGGATACTGGACCCTTG | + |
Preference number: 5 (lower is better) Translates to: PYNSTPSSSWKSLQGISGLGTCT*MDTGPL Trigger: CAAGGGTCCAGTATCCATCAAAGTGCAGGTACCCAA...ACCAGAAATCCCCTGGAGGGATTTCCAGGAGGAGGAGGGGGTACTGTTGTATGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS CCA 90 bp | CTTCTCGTAGCGCTCCTGAATGAGGATCCGAGCTCCCAGTTCCTCTaGTGTTGTTGGGGGTGGAAAGTTTCCTTGCTCATTGGGTTGAAA | + |
Preference number: 5 (lower is better) Translates to: LLVALLNEDPSSQFL*CCWGWKVSLLIGLK Trigger: TTTCAACCCAATGAGCAAGGAAACTTTCCACCCCCAACAACACCAGAGGAACTGGGAGCTCGGATCCTCATTCAGGAGCGCTACGAGAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS-3UTR CAA 90 bp | CCCCTCCCTCTGAATACACACAGCAACACCACCCATGCCTCCACAAGACCACAAGTCTTATCCTGCATGTaGGGTACCTGCACTTTGATG | + |
Preference number: 5 (lower is better) Translates to: PLPLNTHSNTTHASTRPQVLSCM*GTCTLM Trigger: CATCAAAGTGCAGGTACCCAACATGCAGGATAAGAC...TTGTGGTCTTGTGGAGGCATGGGTGGTGTTGCTGTGTGTATTCAGAGGGAGGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS-3UTR CAA 90 bp | CTGTGGTCAATGAGCCTCCAAGTGAATGTGAGTCAGGACAGGCACTCATTCAGGGGGTGGGATCCTCCTTaGACGATGCTTCTTCTTCAA | + |
Preference number: 5 (lower is better) Translates to: LWSMSLQVNVSQDRHSFRGWDPP*TMLLLQ Trigger: TTGAAGAAGAAGCATCGTCAAAGGAGGATCCCACCC...CCTGAATGAGTGCCTGTCCTGACTCACATTCACTTGGAGGCTCATTGACCACAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS-3UTR CAA 90 bp | CAGCAACACCACCCATGCCTCCACAAGACCACAACTCCAAAAATAATAACCCACCAGGCACAAAGGCTGTaGGCACAATCATGGGAGGTG | + |
Preference number: 5 (lower is better) Translates to: QQHHPCLHKTTTPKIITHQAQRL*AQSWEV Trigger: CACCTCCCATGATTGTGCCAACAGCCTTTGTGCCTG...GTGGGTTATTATTTTTGGAGTTGTGGTCTTGTGGAGGCATGGGTGGTGTTGCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS-3UTR CAA 90 bp | CCCCTCCCTCTGAATACACACAGCAACACCACCCATGCCTCCACAAGACCACAAAGGGAGTTGGAATCCTaGATGAAGATGCCTTCATAC | + |
Preference number: 5 (lower is better) Translates to: PLPLNTHSNTTHASTRPQRELES*MKMPSY Trigger: GTATGAAGGCATCTTCATCAAGGATTCCAACTCCCT...TTGTGGTCTTGTGGAGGCATGGGTGGTGTTGCTGTGTGTATTCAGAGGGAGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS TCA 90 bp | GTAAATAATGCCGACCACTGGCTTGGAAGGGGTGGGATCCTCCTTTaGCGATGCTTCTTCTTCAATTGGCTGTTTGGACTCAGTGGCTAC | + |
Preference number: 5 (lower is better) Translates to: VNNADHWLGRGGILL*RCFFFNWLFGLSGY Trigger: GTAGCCACTGAGTCCAAACAGCCAATTGAAGAAGAAGCATCGTCAAAGGAGGATCCCACCCCTTCCAAGCCAGTGGTCGGCATTATTTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS TCA 90 bp | TCAGCTTCCATTCCGTCTTATCCTGCATGTTGGGTACCTGCACTTTaGTGGATACTGGACCCTTGTTCCTGCGCAGGAATTCTTCCTCAG | + |
Preference number: 5 (lower is better) Translates to: SASIPSYPACWVPAL*WILDPCSCAGILPQ Trigger: CTGAGGAAGAATTCCTGCGCAGGAACAAGGGTCCAGTATCCATCAAAGTGCAGGTACCCAACATGCAGGATAAGACGGAATGGAAGCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS TCA 90 bp | TCATACTGTAGTTTCTGTTTCCCCGCAGGCATGCCCGTGGCTTCATaGATCTTCACTTTGATGACAGAGACCTGGTCTGTGAGTGGGAGA | + |
Preference number: 5 (lower is better) Translates to: SYCSFCFPAGMPVAS*IFTLMTETWSVSGR Trigger: TCTCCCACTCACAGACCAGGTCTCTGTCATCAAAGTGAAGATTCATGAAGCCACGGGCATGCCTGCGGGGAAACAGAAACTACAGTATGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS-3UTR CAA 90 bp | CAATGTGTTCAAAACCAGCCTAACCTATATAGCAAGTTCCAGTGGAGCTATAACGGTGTACAGGAGGCATaGGAGCTGGGGCTGGGACTG | + |
Preference number: 5 (lower is better) Translates to: QCVQNQPNLYSKFQWSYNGVQEA*ELGLGL Trigger: CAGTCCCAGCCCCAGCTCCAATGCCTCCTGTACACC...GTTATAGCTCCACTGGAACTTGCTATATAGGTTAGGCTGGTTTTGAACACATTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS-3UTR CAA 90 bp | CTGTGGTCAATGAGCCTCCAAGTGAATGTGAGTCAGGACAGGCACTCATTCAGGATGCTTCTTCTTCAATaGGCTGTTTGGACTCAGTGG | + |
Preference number: 5 (lower is better) Translates to: LWSMSLQVNVSQDRHSFRMLLLQ*AVWTQW Trigger: CCACTGAGTCCAAACAGCCAATTGAAGAAGAAGCAT...CCTGAATGAGTGCCTGTCCTGACTCACATTCACTTGGAGGCTCATTGACCACAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS-3UTR CAA 90 bp | GAGGCCCCAGGGACACTCCTGGAATTGGTGGTGCAAAGAGGTACAATGGCAAGGTTTTCAGCCTCTTTCTaGAGCTTTGAAAATAAGCCT | + |
Preference number: 5 (lower is better) Translates to: EAPGTLLELVVQRGTMARFSASF*SFENKP Trigger: AGGCTTATTTTCAAAGCTCAAGAAAGAGGCTGAAAA...CCTTGCCATTGTACCTCTTTGCACCACCAATTCCAGGAGTGTCCCTGGGGCCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS-3UTR CAA 90 bp | CTTTCAGCACATGCAGTCCTCCAAAAAGAAACCAGCTTTGTTTACAGCTTATCACTGCCGCCTCTCTCCTaGAGGGCCAAGTGGATGACA | + |
Preference number: 5 (lower is better) Translates to: LSAHAVLQKETSFVYSLSLPPLS*RAKWMT Trigger: TGTCATCCACTTGGCCCTCAAGGAGAGAGGCGGCAG...TGATAAGCTGTAAACAAAGCTGGTTTCTTTTTGGAGGACTGCATGTGCTGAAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS-3UTR CAA 90 bp | TTCTACCCAGTCACATTCTTGGTCTCATGTCACAGCCTCAGCCATAGAGGCACTTTGAACTTGGGGTTGTaGATCTCATTCTGTCGAATC | + |
Preference number: 5 (lower is better) Translates to: FYPVTFLVSCHSLSHRGTLNLGL*ISFCRI Trigger: GATTCGACAGAATGAGATCAACAACCCCAAGTTCAA...AGTGCCTCTATGGCTGAGGCTGTGACATGAGACCAAGAATGTGACTGGGTAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS-3UTR CAA 90 bp | AGGACAGGCACTCATTCAGGAATTCTGGGAACTGTTAGCTCCCGAGCCTGGATCTTTGAAAATAAGCCTTaGGGTGGAATCAAGATCTTG | + |
Preference number: 5 (lower is better) Translates to: RTGTHSGILGTVSSRAWIFENKP*GGIKIL Trigger: CAAGATCTTGATTCCACCCAAAGGCTTATTTTCAAA...GATCCAGGCTCGGGAGCTAACAGTTCCCAGAATTCCTGAATGAGTGCCTGTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS-3UTR CAA 90 bp | GCACATGCAGTCCTCCAAAAAGAAACCAGCTTTGTTTACAGCTTATCAACACACTCGGTCTTTAGTTTCTaGGATGGAGGCTCATCCTCC | + |
Preference number: 5 (lower is better) Translates to: AHAVLQKETSFVYSLSTHSVFSF*DGGSSS Trigger: GGAGGATGAGCCTCCATCCAAGAAACTAAAGACCGA...GTGTGTTGATAAGCTGTAAACAAAGCTGGTTTCTTTTTGGAGGACTGCATGTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS-3UTR CAA 90 bp | CTTTCAGCACATGCAGTCCTCCAAAAAGAAACCAGCTTTGTTTACAGCTTATCATCTTCAATTGGCTGTTaGGACTCAGTGGCTACTGGC | + |
Preference number: 5 (lower is better) Translates to: LSAHAVLQKETSFVYSLSSSIGC*DSVATG Trigger: GCCAGTAGCCACTGAGTCCAAACAGCCAATTGAAGA...TGATAAGCTGTAAACAAAGCTGGTTTCTTTTTGGAGGACTGCATGTGCTGAAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS-3UTR CAA 90 bp | CTTTCAGCACATGCAGTCCTCCAAAAAGAAACCAGCTTTGTTTACAGCTTATCAGGTGGAATCAAGATCTaGGTATACTGCTCCACCAGC | + |
Preference number: 5 (lower is better) Translates to: LSAHAVLQKETSFVYSLSGGIKI*VYCSTS Trigger: GCTGGTGGAGCAGTATACCAAGATCTTGATTCCACC...TGATAAGCTGTAAACAAAGCTGGTTTCTTTTTGGAGGACTGCATGTGCTGAAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS-3UTR CAA 90 bp | GCACATGCAGTCCTCCAAAAAGAAACCAGCTTTGTTTACAGCTTATCAACACACGGGTGGAAAGTTTCCTaGCTCATTGGGTTGAAAATC | + |
Preference number: 5 (lower is better) Translates to: AHAVLQKETSFVYSLSTHGWKVS*LIGLKI Trigger: GATTTTCAACCCAATGAGCAAGGAAACTTTCCACCC...GTGTGTTGATAAGCTGTAAACAAAGCTGGTTTCTTTTTGGAGGACTGCATGTGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS-3UTR CAA 90 bp | CTTTCAGCACATGCAGTCCTCCAAAAAGAAACCAGCTTTGTTTACAGCTTATCATTGGGATTTAAGAAATaGAACTTGGGGTTGTTGATC | + |
Preference number: 5 (lower is better) Translates to: LSAHAVLQKETSFVYSLSLGFKK*NLGLLI Trigger: GATCAACAACCCCAAGTTCAATTTCTTAAATCCCAA...TGATAAGCTGTAAACAAAGCTGGTTTCTTTTTGGAGGACTGCATGTGCTGAAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS GCA 72 bp | ATCTGCTCCTGGAGGGTGATGTTGGCCTGGGCAGCCTaGTGGGTCCGGGCCATGCTGCCTGAATGGCCATCC | + |
Preference number: 6 (lower is better) Translates to: ICSWRVMLAWAA*WVRAMLPEWPS Trigger: GGATGGCCATTCAGGCAGCATGGCCCGGACCCAGCAGGCTGCCCAGGCCAACATCACCCTCCAGGAGCAGAT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS GCA 72 bp | TCATCACTCTGCTTCTCTCGGATGGAGCGGTCCCGCTaGTCCAGCCAGCGGGGGTCAAGAAGCCCAATGCGC | + |
Preference number: 6 (lower is better) Translates to: SSLCFSRMERSR*SSQRGSRSPMR Trigger: GCGCATTGGGCTTCTTGACCCCCGCTGGCTGGAGCAGCGGGACCGCTCCATCCGAGAGAAGCAGAGTGATGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS GCA 72 bp | GGCACCAGGCCCTTGGCCTTATGGATGGCCTCAATCTaGTCCTGGAGGGTGATGTTGGCCTGGGCAGCCTGC | + |
Preference number: 6 (lower is better) Translates to: GTRPLALWMASI*SWRVMLAWAAC Trigger: GCAGGCTGCCCAGGCCAACATCACCCTCCAGGAGCAGATTGAGGCCATCCATAAGGCCAAGGGCCTGGTGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS CCA 72 bp | TGGGCAGCCTGCTGGGTCCGGGCCATGCTGCCTGAATaGCCATCCCAAGTCACCTTCTCCTCTGGCTTCTGG | + |
Preference number: 6 (lower is better) Translates to: WAACWVRAMLPE*PSQVTFSSGFW Trigger: CCAGAAGCCAGAGGAGAAGGTGACTTGGGATGGCCATTCAGGCAGCATGGCCCGGACCCAGCAGGCTGCCCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS CCA 72 bp | ATGGCCTCAATCTGCTCCTGGAGGGTGATGTTGGCCTaGGCAGCCTGCTGGGTCCGGGCCATGCTGCCTGAA | + |
Preference number: 6 (lower is better) Translates to: MASICSWRVMLA*AACWVRAMLPE Trigger: TTCAGGCAGCATGGCCCGGACCCAGCAGGCTGCCCAGGCCAACATCACCCTCCAGGAGCAGATTGAGGCCAT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS CCA 72 bp | AGGCCCTTGGCCTTATGGATGGCCTCAATCTGCTCCTaGAGGGTGATGTTGGCCTGGGCAGCCTGCTGGGTC | + |
Preference number: 6 (lower is better) Translates to: RPLALWMASICS*RVMLAWAACWV Trigger: GACCCAGCAGGCTGCCCAGGCCAACATCACCCTCCAGGAGCAGATTGAGGCCATCCATAAGGCCAAGGGCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS CAA 90 bp | CGGGGCGCCATGATGGGAGGTGCTGCAGGAGGCATAGGTACCACATaGATCCTGGGTGCGTGGATGATGGGTGGCATGGGGGCAATCACT | + |
Preference number: 6 (lower is better) Translates to: RGAMMGGAAGGIGTT*ILGAWMMGGMGAIT Trigger: AGTGATTGCCCCCATGCCACCCATCATCCACGCACCCAGGATCAATGTGGTACCTATGCCTCCTGCAGCACCTCCCATCATGGCGCCCCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS GCA 72 bp | ACCTTCTGGGGCAGCTGCTGTTGCGTAGCTTGCTGCTaGTGCTGCATAACCTTGGGGATGGCAGCTGAGGGC | + |
Preference number: 6 (lower is better) Translates to: TFWGSCCCVACC*CCITLGMAAEG Trigger: GCCCTCAGCTGCCATCCCCAAGGTTATGCAGCAGCAGCAGCAAGCTACGCAACAGCAGCTGCCCCAGAAGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS GCA 72 bp | CCCGCTGCTCCAGCCAGCGGGGGTCAAGAAGCCCAATaGGCATGTGCTCCTGCATTTTGCTGGCAGGAATCT | + |
Preference number: 6 (lower is better) Translates to: PAAPASGGQEAQ*ACAPAFCWQES Trigger: AGATTCCTGCCAGCAAAATGCAGGAGCACATGCGCATTGGGCTTCTTGACCCCCGCTGGCTGGAGCAGCGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS CCA 72 bp | ACGATGCTTCTTCTTCAATTGGCTGTTTGGACTCAGTaGCTACTGGCGGCGGCGGGGGTACCGCCTGCACGG | + |
Preference number: 6 (lower is better) Translates to: TMLLLQLAVWTQ*LLAAAGVPPAR Trigger: CCGTGCAGGCGGTACCCCCGCCGCCGCCAGTAGCCACTGAGTCCAAACAGCCAATTGAAGAAGAAGCATCGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS CAA 90 bp | GGTCTCTTGGATCACCTGGGCTTGGACCTTCTGGGGCAGCTGCTGTaGCGTAGCTTGCTGCTGCTGCTGCATAACCTTGGGGATGGCAGC | + |
Preference number: 6 (lower is better) Translates to: GLLDHLGLDLLGQLL*RSLLLLLHNLGDGS Trigger: GCTGCCATCCCCAAGGTTATGCAGCAGCAGCAGCAAGCTACGCAACAGCAGCTGCCCCAGAAGGTCCAAGCCCAGGTGATCCAAGAGACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS GCA 72 bp | ATCACCTGGGCTTGGACCTTCTGGGGCAGCTGCTGTTaGGTAGCTTGCTGCTGCTGCTGCATAACCTTGGGG | + |
Preference number: 6 (lower is better) Translates to: ITWAWTFWGSCC*VACCCCCITLG Trigger: CCCCAAGGTTATGCAGCAGCAGCAGCAAGCTACGCAACAGCAGCTGCCCCAGAAGGTCCAAGCCCAGGTGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS CCA 72 bp | GGGGGCTCCTTCGGTACTATGGTCTCTTGGATCACCTaGGCTTGGACCTTCTGGGGCAGCTGCTGTTGCGTA | + |
Preference number: 6 (lower is better) Translates to: GGSFGTMVSWIT*AWTFWGSCCCV Trigger: TACGCAACAGCAGCTGCCCCAGAAGGTCCAAGCCCAGGTGATCCAAGAGACCATAGTACCGAAGGAGCCCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS CCA 72 bp | AACTCAGGAGGGGGCTCCTTCGGTACTATGGTCTCTTaGATCACCTGGGCTTGGACCTTCTGGGGCAGCTGC | + |
Preference number: 6 (lower is better) Translates to: NSGGGSFGTMVS*ITWAWTFWGSC Trigger: GCAGCTGCCCCAGAAGGTCCAAGCCCAGGTGATCCAAGAGACCATAGTACCGAAGGAGCCCCCTCCTGAGTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS CCA 72 bp | GTGCATAAACCTCATCATCACTCTGCTTCTCTCGGATaGAGCGGTCCCGCTGCTCCAGCCAGCGGGGGTCAA | + |
Preference number: 6 (lower is better) Translates to: VHKPHHHSASLG*SGPAAPASGGQ Trigger: TTGACCCCCGCTGGCTGGAGCAGCGGGACCGCTCCATCCGAGAGAAGCAGAGTGATGATGAGGTTTATGCAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS CAA 72 bp | GATCACCTGGGCTTGGACCTTCTGGGGCAGCTGCTGTaGCGTAGCTTGCTGCTGCTGCTGCATAACCTTGGG | + |
Preference number: 6 (lower is better) Translates to: DHLGLDLLGQLL*RSLLLLLHNLG Trigger: CCCAAGGTTATGCAGCAGCAGCAGCAAGCTACGCAACAGCAGCTGCCCCAGAAGGTCCAAGCCCAGGTGATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS GCA 72 bp | TCTTGGATCACCTGGGCTTGGACCTTCTGGGGCAGCTaGTGTTGCGTAGCTTGCTGCTGCTGCTGCATAACC | + |
Preference number: 6 (lower is better) Translates to: SWITWAWTFWGS*CCVACCCCCIT Trigger: GGTTATGCAGCAGCAGCAGCAAGCTACGCAACAGCAGCTGCCCCAGAAGGTCCAAGCCCAGGTGATCCAAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS GCA 72 bp | CACAGATGCCATGGGTGGCCGAGGCATGACAGGTACTaGAGATACAACAGTGGTGCGGACTGGAGGTGGCAT | + |
Preference number: 6 (lower is better) Translates to: HRCHGWPRHDRY*RYNSGADWRWH Trigger: ATGCCACCTCCAGTCCGCACCACTGTTGTATCTGCAGTACCTGTCATGCCTCGGCCACCCATGGCATCTGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS CCA 72 bp | GCAGGAGGCATAGGTACCACATTGATCCTGGGTGCGTaGATGATGGGTGGCATGGGGGCAATCACTGAGCCT | + |
Preference number: 6 (lower is better) Translates to: AGGIGTTLILGA*MMGGMGAITEP Trigger: AGGCTCAGTGATTGCCCCCATGCCACCCATCATCCACGCACCCAGGATCAATGTGGTACCTATGCCTCCTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS CAA 72 bp | AAACTCAGGAGGGGGCTCCTTCGGTACTATGGTCTCTaGGATCACCTGGGCTTGGACCTTCTGGGGCAGCTG | + |
Preference number: 6 (lower is better) Translates to: KLRRGLLRYYGL*DHLGLDLLGQL Trigger: CAGCTGCCCCAGAAGGTCCAAGCCCAGGTGATCCAAGAGACCATAGTACCGAAGGAGCCCCCTCCTGAGTTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS CAA 72 bp | ATGATGGGAGGTGCTGCAGGAGGCATAGGTACCACATaGATCCTGGGTGCGTGGATGATGGGTGGCATGGGG | + |
Preference number: 6 (lower is better) Translates to: MMGGAAGGIGTT*ILGAWMMGGMG Trigger: CCCCATGCCACCCATCATCCACGCACCCAGGATCAATGTGGTACCTATGCCTCCTGCAGCACCTCCCATCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS CAA 90 bp | GATGAACTCAAACTCAGGAGGGGGCTCCTTCGGTACTATGGTCTCTaGGATCACCTGGGCTTGGACCTTCTGGGGCAGCTGCTGTTGCGT | + |
Preference number: 6 (lower is better) Translates to: DELKLRRGLLRYYGL*DHLGLDLLGQLLLR Trigger: ACGCAACAGCAGCTGCCCCAGAAGGTCCAAGCCCAGGTGATCCAAGAGACCATAGTACCGAAGGAGCCCCCTCCTGAGTTTGAGTTCATC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS CAA 90 bp | CTGGGGCCAATCTTCTCCTTAGTGTCATCTTCCGGCACCAGGCCCTaGGCCTTATGGATGGCCTCAATCTGCTCCTGGAGGGTGATGTTG | + |
Preference number: 6 (lower is better) Translates to: LGPIFSLVSSSGTRP*ALWMASICSWRVML Trigger: CAACATCACCCTCCAGGAGCAGATTGAGGCCATCCATAAGGCCAAGGGCCTGGTGCCGGAAGATGACACTAAGGAGAAGATTGGCCCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS TCA 72 bp | CCTCGCTCTCCCCAAACTTCTCGTAGCGCTCCTGAATaGGGATCCGAGCTCCCAGTTCCTCTGGTGTTGTTG | + |
Preference number: 6 (lower is better) Translates to: PRSPQTSRSAPE*GSELPVPLVLL Trigger: CAACAACACCAGAGGAACTGGGAGCTCGGATCCTCATTCAGGAGCGCTACGAGAAGTTTGGGGAGAGCGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS CCA 72 bp | TCCTTCGGTACTATGGTCTCTTGGATCACCTGGGCTTaGACCTTCTGGGGCAGCTGCTGTTGCGTAGCTTGC | + |
Preference number: 6 (lower is better) Translates to: SFGTMVSWITWA*TFWGSCCCVAC Trigger: GCAAGCTACGCAACAGCAGCTGCCCCAGAAGGTCCAAGCCCAGGTGATCCAAGAGACCATAGTACCGAAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS CAA 72 bp | CTCCTTCGGTACTATGGTCTCTTGGATCACCTGGGCTaGGACCTTCTGGGGCAGCTGCTGTTGCGTAGCTTG | + |
Preference number: 6 (lower is better) Translates to: LLRYYGLLDHLG*DLLGQLLLRSL Trigger: CAAGCTACGCAACAGCAGCTGCCCCAGAAGGTCCAAGCCCAGGTGATCCAAGAGACCATAGTACCGAAGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS TCA 72 bp | GGGATATTGGTGGCTGAAGATGGAGGTGGTGGCTGCTaGGGGATTTCATTGGGCTTGCTGGGGCCAATCTTC | + |
Preference number: 6 (lower is better) Translates to: GILVAEDGGGGC*GISLGLLGPIF Trigger: GAAGATTGGCCCCAGCAAGCCCAATGAAATCCCTCAGCAGCCACCACCTCCATCTTCAGCCACCAATATCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS GCA 72 bp | GGAGGCATGGGTGTCTCTGGGGGTGGAGGCACTTTCTaGCCTTCTTCTTCATCATCTGAACCCTCATCCATG | + |
Preference number: 6 (lower is better) Translates to: GGMGVSGGGGTF*PSSSSSEPSSM Trigger: CATGGATGAGGGTTCAGATGATGAAGAAGAAGGGCAGAAAGTGCCTCCACCCCCAGAGACACCCATGCCTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS CCA 72 bp | GCGCTCCTGAATGAGGATCCGAGCTCCCAGTTCCTCTaGTGTTGTTGGGGGTGGAAAGTTTCCTTGCTCATT | + |
Preference number: 6 (lower is better) Translates to: ALLNEDPSSQFL*CCWGWKVSLLI Trigger: AATGAGCAAGGAAACTTTCCACCCCCAACAACACCAGAGGAACTGGGAGCTCGGATCCTCATTCAGGAGCGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS CCA 72 bp | TCTGCATCAGCTGGGTCAGAAACTGACGCCCATTCCTaGCCACAAACTGAGCTGTCAGCTTCACTACATCCA | + |
Preference number: 6 (lower is better) Translates to: SASAGSETDAHS*PQTELSASLHP Trigger: TGGATGTAGTGAAGCTGACAGCTCAGTTTGTGGCCAGGAATGGGCGTCAGTTTCTGACCCAGCTGATGCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS CAA 72 bp | TGCCGACCACTGGCTTGGAAGGGGTGGGATCCTCCTTaGACGATGCTTCTTCTTCAATTGGCTGTTTGGACT | + |
Preference number: 6 (lower is better) Translates to: CRPLAWKGWDPP*TMLLLQLAVWT Trigger: AGTCCAAACAGCCAATTGAAGAAGAAGCATCGTCAAAGGAGGATCCCACCCCTTCCAAGCCAGTGGTCGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS TCA 72 bp | AGTTTCTGTTTCCCCGCAGGCATGCCCGTGGCTTCATaGATCTTCACTTTGATGACAGAGACCTGGTCTGTG | + |
Preference number: 6 (lower is better) Translates to: SFCFPAGMPVAS*IFTLMTETWSV Trigger: CACAGACCAGGTCTCTGTCATCAAAGTGAAGATTCATGAAGCCACGGGCATGCCTGCGGGGAAACAGAAACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS GCA 72 bp | AGCTTCCATTCCGTCTTATCCTGCATGTTGGGTACCTaGACTTTGATGGATACTGGACCCTTGTTCCTGCGC | + |
Preference number: 6 (lower is better) Translates to: SFHSVLSCMLGT*TLMDTGPLFLR Trigger: GCGCAGGAACAAGGGTCCAGTATCCATCAAAGTGCAGGTACCCAACATGCAGGATAAGACGGAATGGAAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS CCA 72 bp | GATCCGAGCTCCCAGTTCCTCTGGTGTTGTTGGGGGTaGAAAGTTTCCTTGCTCATTGGGTTGAAAATCCAC | + |
Preference number: 6 (lower is better) Translates to: DPSSQFLWCCWG*KVSLLIGLKIH Trigger: GTGGATTTTCAACCCAATGAGCAAGGAAACTTTCCACCCCCAACAACACCAGAGGAACTGGGAGCTCGGATC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS GCA 72 bp | TCTACCCCAAAGATGTCAGTACGTCGCTCAGCCAACTaGTTTAAGCTGCTCTCAATATCCAGACCTGGTGCA | + |
Preference number: 6 (lower is better) Translates to: STPKMSVRRSAN*FKLLSISRPGA Trigger: TGCACCAGGTCTGGATATTGAGAGCAGCTTAAAGCAGTTGGCTGAGCGACGTACTGACATCTTTGGGGTAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS CCA 72 bp | GAATGGCCATCCCAAGTCACCTTCTCCTCTGGCTTCTaGATCTCCTCTTCACCAATCTTCTTACCAATGGCT | + |
Preference number: 6 (lower is better) Translates to: EWPSQVTFSSGF*ISSSPIFLPMA Trigger: AGCCATTGGTAAGAAGATTGGTGAAGAGGAGATCCAGAAGCCAGAGGAGAAGGTGACTTGGGATGGCCATTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS CAA 72 bp | CAGTTCCTCTGGTGTTGTTGGGGGTGGAAAGTTTCCTaGCTCATTGGGTTGAAAATCCACTGTCTCCACCAC | + |
Preference number: 6 (lower is better) Translates to: QFLWCCWGWKVS*LIGLKIHCLHH Trigger: GTGGTGGAGACAGTGGATTTTCAACCCAATGAGCAAGGAAACTTTCCACCCCCAACAACACCAGAGGAACTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS CAA 72 bp | CATTCCGTCTTATCCTGCATGTTGGGTACCTGCACTTaGATGGATACTGGACCCTTGTTCCTGCGCAGGAAT | + |
Preference number: 6 (lower is better) Translates to: HSVLSCMLGTCT*MDTGPLFLRRN Trigger: ATTCCTGCGCAGGAACAAGGGTCCAGTATCCATCAAAGTGCAGGTACCCAACATGCAGGATAAGACGGAATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS CAA 90 bp | TTCAGCTTCCATTCCGTCTTATCCTGCATGTTGGGTACCTGCACTTaGATGGATACTGGACCCTTGTTCCTGCGCAGGAATTCTTCCTCA | + |
Preference number: 6 (lower is better) Translates to: FSFHSVLSCMLGTCT*MDTGPLFLRRNSSS Trigger: TGAGGAAGAATTCCTGCGCAGGAACAAGGGTCCAGTATCCATCAAAGTGCAGGTACCCAACATGCAGGATAAGACGGAATGGAAGCTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS TCA 72 bp | ATTCCGTCTTATCCTGCATGTTGGGTACCTGCACTTTaGTGGATACTGGACCCTTGTTCCTGCGCAGGAATT | + |
Preference number: 6 (lower is better) Translates to: IPSYPACWVPAL*WILDPCSCAGI Trigger: AATTCCTGCGCAGGAACAAGGGTCCAGTATCCATCAAAGTGCAGGTACCCAACATGCAGGATAAGACGGAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS CAA 72 bp | TTTTCAGCCTCTTTCTTGAGCTTTGAAAATAAGCCTTaGGGTGGAATCAAGATCTTGGTATACTGCTCCACC | + |
Preference number: 6 (lower is better) Translates to: FSASFLSFENKP*GGIKILVYCST Trigger: GGTGGAGCAGTATACCAAGATCTTGATTCCACCCAAAGGCTTATTTTCAAAGCTCAAGAAAGAGGCTGAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |
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CDS CAA 72 bp | GGGTCATTGGGATTTAAGAAATTGAACTTGGGGTTGTaGATCTCATTCTGTCGAATCCTAGCTTCAAATTCA | + |
Preference number: 6 (lower is better) Translates to: GSLGFKKLNLGL*ISFCRILASNS Trigger: TGAATTTGAAGCTAGGATTCGACAGAATGAGATCAACAACCCCAAGTTCAATTTCTTAAATCCCAATGACCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002198.4 |