Pregenerated sensors for SF1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024949Ensembl transcript IDs: ENSMUST00000113485.9, ENSMUST00000113487.8, ENSMUST00000113488.8, ENSMUST00000113489.8, ENSMUST00000124667.2, ENSMUST00000125516.8, ENSMUST00000131252.8, ENSMUST00000144409.8, ENSMUST00000155973.2, ENSMUST00000162237.2
Found 484 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTGCCTGGAAGGGTCACCAATGGGCGCGGAAAGTCCTCACTCTCATaGCTCGGGCCATCGCTGCCGCGGGGAGGGATCCTGGCGGCCCGG | + |
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Preference number: 1 (lower is better) Translates to: LPGRVTNGRGKSSLS*LGPSLPRGGILAAR Trigger: CCGGGCCGCCAGGATCCCTCCCCGCGGCAGCGATGGCCCGAGCCATGAGAGTGAGGACTTTCCGCGCCCATTGGTGACCCTTCCAGGCAG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113485.9 ENSMUST00000131252.8 |
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| 3UTR GCA 90 bp | CCAATGGGCGCGGAAAGTCCTCACTCTCATGGCTCGGGCCATCGCTaGCGCGGGGAGGGATCCTGGCGGCCCGGTTTGGGGAGAGGCAGA | + |
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Preference number: 1 (lower is better) Translates to: PMGAESPHSHGSGHR*RGEGSWRPGLGRGR Trigger: TCTGCCTCTCCCCAAACCGGGCCGCCAGGATCCCTCCCCGCGGCAGCGATGGCCCGAGCCATGAGAGTGAGGACTTTCCGCGCCCATTGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000113485.9 ENSMUST00000131252.8 |
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| 3UTR GCA 90 bp | GAGAGACGGTGGTGGTGGGTTGCTGGCAGGAGCAGCAGGTCTTGGTaGACTAGCCAGGGGCGTGGTGGCAGGCCCAGAGGTAGAGCCCAC | + |
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Preference number: 1 (lower is better) Translates to: ERRWWWVAGRSSRSW*TSQGRGGRPRGRAH Trigger: GTGGGCTCTACCTCTGGGCCTGCCACCACGCCCCTGGCTAGTGCACCAAGACCTGCTGCTCCTGCCAGCAACCCACCACCACCGTCTCTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113485.9 |
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| 3UTR CCA 90 bp | CCACCAGGGGCGCTGCTGAGGCTGTCTGCCTGGAAGGGTCACCAATaGGCGCGGAAAGTCCTCACTCTCATGGCTCGGGCCATCGCTGCC | + |
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Preference number: 1 (lower is better) Translates to: PPGALLRLSAWKGHQ*ARKVLTLMARAIAA Trigger: GGCAGCGATGGCCCGAGCCATGAGAGTGAGGACTTTCCGCGCCCATTGGTGACCCTTCCAGGCAGACAGCCTCAGCAGCGCCCCTGGTGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113485.9 ENSMUST00000131252.8 |
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| 3UTR CCA 90 bp | GCCATGGTGCCCAGGTGGGTGGGGGCCCTGGTTCATCGGTGGTGGTaGTGGCTGCATCCAAGGTGGTGGTGGTCCATTTGGGTTGTGCTG | + |
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Preference number: 1 (lower is better) Translates to: AMVPRWVGALVHRWW*WLHPRWWWSIWVVL Trigger: CAGCACAACCCAAATGGACCACCACCACCTTGGATGCAGCCACCACCACCACCGATGAACCAGGGCCCCCACCCACCTGGGCACCATGGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113485.9 |
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| 3UTR CCA 90 bp | AGGGCCATGGTGCCCAGGTGGGTGGGGGCCCTGGTTCATCGGTGGTaGTGGTGGCTGCATCCAAGGTGGTGGTGGTCCATTTGGGTTGTG | + |
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Preference number: 1 (lower is better) Translates to: RAMVPRWVGALVHRW*WWLHPRWWWSIWVV Trigger: CACAACCCAAATGGACCACCACCACCTTGGATGCAGCCACCACCACCACCGATGAACCAGGGCCCCCACCCACCTGGGCACCATGGCCCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113485.9 |
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| 3UTR CCA 90 bp | AGGAGGGCCATGGTGCCCAGGTGGGTGGGGGCCCTGGTTCATCGGTaGTGGTGGTGGCTGCATCCAAGGTGGTGGTGGTCCATTTGGGTT | + |
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Preference number: 1 (lower is better) Translates to: RRAMVPRWVGALVHR*WWWLHPRWWWSIWV Trigger: AACCCAAATGGACCACCACCACCTTGGATGCAGCCACCACCACCACCGATGAACCAGGGCCCCCACCCACCTGGGCACCATGGCCCTCCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113485.9 |
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| 3UTR CCA 90 bp | TTACCCATTGGAGGAGGGCCATGGTGCCCAGGTGGGTGGGGGCCCTaGTTCATCGGTGGTGGTGGTGGCTGCATCCAAGGTGGTGGTGGT | + |
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Preference number: 1 (lower is better) Translates to: LPIGGGPWCPGGWGP*FIGGGGGCIQGGGG Trigger: ACCACCACCACCTTGGATGCAGCCACCACCACCACCGATGAACCAGGGCCCCCACCCACCTGGGCACCATGGCCCTCCTCCAATGGGTAA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113485.9 |
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| 3UTR TCA 90 bp | ACTCAGGCTGCTTTGCCGAACCATCCTGTCCACCAGGGGCGCTGCTaGGGCTGTCTGCCTGGAAGGGTCACCAATGGGCGCGGAAAGTCC | + |
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Preference number: 1 (lower is better) Translates to: TQAALPNHPVHQGRC*GCLPGRVTNGRGKS Trigger: GGACTTTCCGCGCCCATTGGTGACCCTTCCAGGCAGACAGCCTCAGCAGCGCCCCTGGTGGACAGGATGGTTCGGCAAAGCAGCCTGAGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113485.9 ENSMUST00000131252.8 |
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| 3UTR GCA 90 bp | TGCCCAGGTGGGTGGGGGCCCTGGTTCATCGGTGGTGGTGGTGGCTaGATCCAAGGTGGTGGTGGTCCATTTGGGTTGTGCTGCATGGGA | + |
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Preference number: 1 (lower is better) Translates to: CPGGWGPWFIGGGGG*IQGGGGPFGLCCMG Trigger: TCCCATGCAGCACAACCCAAATGGACCACCACCACCTTGGATGCAGCCACCACCACCACCGATGAACCAGGGCCCCCACCCACCTGGGCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113485.9 |
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| 3UTR GCA 90 bp | CACCATAGTGGGGTTGCCTTGCATCTGAGGGGTTCCTGGAGAAGCTaGGGCAGCCGCCTGCTGCTGTTGCCATGGCGGGATGGACCCTGT | + |
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Preference number: 1 (lower is better) Translates to: HHSGVALHLRGSWRS*GSRLLLLPWRDGPC Trigger: ACAGGGTCCATCCCGCCATGGCAACAGCAGCAGGCGGCTGCCGCAGCTTCTCCAGGAACCCCTCAGATGCAAGGCAACCCCACTATGGTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113485.9 |
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| 3UTR CCA 90 bp | GGGGCCCTGGTTCATCGGTGGTGGTGGTGGCTGCATCCAAGGTGGTaGTGGTCCATTTGGGTTGTGCTGCATGGGATGCCCACCATGCCC | + |
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Preference number: 1 (lower is better) Translates to: GALVHRWWWWLHPRW*WSIWVVLHGMPTMP Trigger: GGGCATGGTGGGCATCCCATGCAGCACAACCCAAATGGACCACCACCACCTTGGATGCAGCCACCACCACCACCGATGAACCAGGGCCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113485.9 |
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| 3UTR CCA 90 bp | GCCGAACCATCCTGTCCACCAGGGGCGCTGCTGAGGCTGTCTGCCTaGAAGGGTCACCAATGGGCGCGGAAAGTCCTCACTCTCATGGCT | + |
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Preference number: 1 (lower is better) Translates to: AEPSCPPGALLRLSA*KGHQWARKVLTLMA Trigger: AGCCATGAGAGTGAGGACTTTCCGCGCCCATTGGTGACCCTTCCAGGCAGACAGCCTCAGCAGCGCCCCTGGTGGACAGGATGGTTCGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113485.9 ENSMUST00000131252.8 |
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| 3UTR GCA 90 bp | GGTGGTGGTGGTCCATTTGGGTTGTGCTGCATGGGATGCCCACCATaGCCACCTGTCAGGCTGGGTAATGGGTGTGGGAAGCTGTGGGGG | + |
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Preference number: 1 (lower is better) Translates to: GGGGPFGLCCMGCPP*PPVRLGNGCGKLWG Trigger: CCCCCACAGCTTCCCACACCCATTACCCAGCCTGACAGGTGGGCATGGTGGGCATCCCATGCAGCACAACCCAAATGGACCACCACCACC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113485.9 |
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| 3UTR CCA 90 bp | GTGGGGGCCCTGGTTCATCGGTGGTGGTGGTGGCTGCATCCAAGGTaGTGGTGGTCCATTTGGGTTGTGCTGCATGGGATGCCCACCATG | + |
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Preference number: 1 (lower is better) Translates to: VGALVHRWWWWLHPR*WWSIWVVLHGMPTM Trigger: CATGGTGGGCATCCCATGCAGCACAACCCAAATGGACCACCACCACCTTGGATGCAGCCACCACCACCACCGATGAACCAGGGCCCCCAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113485.9 |
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| 3UTR CCA 90 bp | ATGGTGCCCAGGTGGGTGGGGGCCCTGGTTCATCGGTGGTGGTGGTaGCTGCATCCAAGGTGGTGGTGGTCCATTTGGGTTGTGCTGCAT | + |
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Preference number: 1 (lower is better) Translates to: MVPRWVGALVHRWWW*LHPRWWWSIWVVLH Trigger: ATGCAGCACAACCCAAATGGACCACCACCACCTTGGATGCAGCCACCACCACCACCGATGAACCAGGGCCCCCACCCACCTGGGCACCAT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113485.9 |
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| 3UTR GCA 90 bp | GGTGGTGGCTGCATCCAAGGTGGTGGTGGTCCATTTGGGTTGTGCTaGATGGGATGCCCACCATGCCCACCTGTCAGGCTGGGTAATGGG | + |
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Preference number: 1 (lower is better) Translates to: GGGCIQGGGGPFGLC*MGCPPCPPVRLGNG Trigger: CCCATTACCCAGCCTGACAGGTGGGCATGGTGGGCATCCCATGCAGCACAACCCAAATGGACCACCACCACCTTGGATGCAGCCACCACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113485.9 |
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| 3UTR GCA 90 bp | CTTTGCCGAACCATCCTGTCCACCAGGGGCGCTGCTGAGGCTGTCTaGCTGGAAGGGTCACCAATGGGCGCGGAAAGTCCTCACTCTCAT | + |
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Preference number: 1 (lower is better) Translates to: LCRTILSTRGAAEAV*LEGSPMGAESPHSH Trigger: ATGAGAGTGAGGACTTTCCGCGCCCATTGGTGACCCTTCCAGGCAGACAGCCTCAGCAGCGCCCCTGGTGGACAGGATGGTTCGGCAAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113485.9 ENSMUST00000131252.8 |
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| 3UTR CCA 90 bp | CATCGGTGGTGGTGGTGGCTGCATCCAAGGTGGTGGTGGTCCATTTaGGTTGTGCTGCATGGGATGCCCACCATGCCCACCTGTCAGGCT | + |
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Preference number: 1 (lower is better) Translates to: HRWWWWLHPRWWWSI*VVLHGMPTMPTCQA Trigger: AGCCTGACAGGTGGGCATGGTGGGCATCCCATGCAGCACAACCCAAATGGACCACCACCACCTTGGATGCAGCCACCACCACCACCGATG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113485.9 |
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| 3UTR GCA 90 bp | GGTGGTGGTGGCTGCATCCAAGGTGGTGGTGGTCCATTTGGGTTGTaGTGCATGGGATGCCCACCATGCCCACCTGTCAGGCTGGGTAAT | + |
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Preference number: 1 (lower is better) Translates to: GGGGCIQGGGGPFGL*CMGCPPCPPVRLGN Trigger: ATTACCCAGCCTGACAGGTGGGCATGGTGGGCATCCCATGCAGCACAACCCAAATGGACCACCACCACCTTGGATGCAGCCACCACCACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113485.9 |
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| 3UTR CCA 90 bp | GTGGCTGCATCCAAGGTGGTGGTGGTCCATTTGGGTTGTGCTGCATaGGATGCCCACCATGCCCACCTGTCAGGCTGGGTAATGGGTGTG | + |
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Preference number: 1 (lower is better) Translates to: VAASKVVVVHLGCAA*DAHHAHLSGWVMGV Trigger: CACACCCATTACCCAGCCTGACAGGTGGGCATGGTGGGCATCCCATGCAGCACAACCCAAATGGACCACCACCACCTTGGATGCAGCCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113485.9 |
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| 3UTR GCA 90 bp | CGAGTCCAGTCACTTGGCCCAGCCCAGTGCGTGCACACACACACATaGGTGCACACACAATCACATGCGTGCATCCCAATGTCTGGCTCC | + |
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Preference number: 1 (lower is better) Translates to: RVQSLGPAQCVHTHT*VHTQSHACIPMSGS Trigger: GGAGCCAGACATTGGGATGCACGCATGTGATTGTGTGTGCACGCATGTGTGTGTGTGCACGCACTGGGCTGGGCCAAGTGACTGGACTCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113485.9 ENSMUST00000131252.8 |
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| 3UTR TCA 90 bp | GGCCGATTCTCTGAAGGACCAGAATTCATCCAGGGTGGGCGGCTCTaGGTTGTAGACATGAGAGACGGTGGTGGTGGGTTGCTGGCAGGA | + |
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Preference number: 1 (lower is better) Translates to: GRFSEGPEFIQGGRL*VVDMRDGGGGLLAG Trigger: TCCTGCCAGCAACCCACCACCACCGTCTCTCATGTCTACAACTCAGAGCCGCCCACCCTGGATGAATTCTGGTCCTTCAGAGAATCGGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113485.9 |
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| 3UTR CCA 90 bp | GACAAAGAAGACACTCGATGCTACAGGTGCCAGGAAAGCTCAAGCTaGCGCCCCACTACCACTGCCCGTTTCCCAAGCGAGTCCAGTCAC | + |
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Preference number: 1 (lower is better) Translates to: DKEDTRCYRCQESSS*RPTTTARFPSESSH Trigger: GTGACTGGACTCGCTTGGGAAACGGGCAGTGGTAGTGGGGCGCCAGCTTGAGCTTTCCTGGCACCTGTAGCATCGAGTGTCTTCTTTGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113485.9 ENSMUST00000131252.8 |
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| 3UTR TCA 90 bp | GGAGAGAAGCAAATGGGTTCTGAGGCAGCTTGGGTGACCAGAGCATaGAAAAGACTCCAGGCTGGCCTATGGTGGCTTGGGCTGTGCCCT | + |
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Preference number: 1 (lower is better) Translates to: GEKQMGSEAAWVTRA*KRLQAGLWWLGLCP Trigger: AGGGCACAGCCCAAGCCACCATAGGCCAGCCTGGAGTCTTTTTCATGCTCTGGTCACCCAAGCTGCCTCAGAACCCATTTGCTTCTCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113485.9 ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000131252.8 |
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| 3UTR TCA 90 bp | ACCACCAGGACCACCTCCATGCATGCCATGGTAGGGCCGATTCTCTaGAGGACCAGAATTCATCCAGGGTGGGCGGCTCTGAGTTGTAGA | + |
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Preference number: 1 (lower is better) Translates to: TTRTTSMHAMVGPIL*RTRIHPGWAALSCR Trigger: TCTACAACTCAGAGCCGCCCACCCTGGATGAATTCTGGTCCTTCAGAGAATCGGCCCTACCATGGCATGCATGGAGGTGGTCCTGGTGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113485.9 |
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| 3UTR GCA 90 bp | ATGGAGCCAGTGTGTTCCGATTCCGTCCACAAAAATAACTCAGGCTaGTTTGCCGAACCATCCTGTCCACCAGGGGCGCTGCTGAGGCTG | + |
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Preference number: 1 (lower is better) Translates to: MEPVCSDSVHKNNSG*FAEPSCPPGALLRL Trigger: CAGCCTCAGCAGCGCCCCTGGTGGACAGGATGGTTCGGCAAAGCAGCCTGAGTTATTTTTGTGGACGGAATCGGAACACACTGGCTCCAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000113485.9 ENSMUST00000113487.8 ENSMUST00000124667.2 ENSMUST00000131252.8 |
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| 3UTR GCA 90 bp | AGCCCAGTGCGTGCACACACACACATGCGTGCACACACAATCACATaGGTGCATCCCAATGTCTGGCTCCATATGGTGAGGTTCGGCGTG | + |
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Preference number: 1 (lower is better) Translates to: SPVRAHTHMRAHTIT*VHPNVWLHMVRFGV Trigger: CACGCCGAACCTCACCATATGGAGCCAGACATTGGGATGCACGCATGTGATTGTGTGTGCACGCATGTGTGTGTGTGCACGCACTGGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113485.9 ENSMUST00000131252.8 |
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| 3UTR CCA 90 bp | GGTGACCAGAGCATGAAAAAGACTCCAGGCTGGCCTATGGTGGCTTaGGCTGTGCCCTGTACTGCTGGCAGGAGTGCAGGAAGATGTGAA | + |
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Preference number: 1 (lower is better) Translates to: GDQSMKKTPGWPMVA*AVPCTAGRSAGRCE Trigger: TTCACATCTTCCTGCACTCCTGCCAGCAGTACAGGGCACAGCCCAAGCCACCATAGGCCAGCCTGGAGTCTTTTTCATGCTCTGGTCACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000113485.9 ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000131252.8 |
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| 3UTR GCA 90 bp | TCCAGTCACTTGGCCCAGCCCAGTGCGTGCACACACACACATGCGTaGACACACAATCACATGCGTGCATCCCAATGTCTGGCTCCATAT | + |
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Preference number: 1 (lower is better) Translates to: SSHLAQPSACTHTHA*THNHMRASQCLAPY Trigger: ATATGGAGCCAGACATTGGGATGCACGCATGTGATTGTGTGTGCACGCATGTGTGTGTGTGCACGCACTGGGCTGGGCCAAGTGACTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113485.9 ENSMUST00000131252.8 |
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| 3UTR GCA 90 bp | AGTTGGGTGAGGAGAGAAGACAAAGAAGACACTCGATGCTACAGGTaGCAGGAAAGCTCAAGCTGGCGCCCCACTACCACTGCCCGTTTC | + |
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Preference number: 1 (lower is better) Translates to: SWVRREDKEDTRCYR*QESSSWRPTTTARF Trigger: GAAACGGGCAGTGGTAGTGGGGCGCCAGCTTGAGCTTTCCTGGCACCTGTAGCATCGAGTGTCTTCTTTGTCTTCTCTCCTCACCCAACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113485.9 ENSMUST00000131252.8 |
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| 3UTR CCA 90 bp | CCTGTACCTAAACCATTTGCCCCTCTCCCTTTGGGAGGAGAGGAATaGAGACAAGGGAAGGATCCTATCTGCAGCAGAAGACCGGGGAGA | + |
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Preference number: 1 (lower is better) Translates to: PVPKPFAPLPLGGEE*RQGKDPICSRRPGR Trigger: TCTCCCCGGTCTTCTGCTGCAGATAGGATCCTTCCCTTGTCTCCATTCCTCTCCTCCCAAAGGGAGAGGGGCAAATGGTTTAGGTACAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000113485.9 ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000125516.8 ENSMUST00000131252.8 |
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| 3UTR TCA 90 bp | ACAGCAACTGCCCTCAAGCCTCTAGACAAAGCAGCAGCAGCTGTATaGGCTGCCAAAGACGTGGCTCTCACAAAGACACAAGGGGTGATT | + |
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Preference number: 1 (lower is better) Translates to: TATALKPLDKAAAAV*AAKDVALTKTQGVI Trigger: AATCACCCCTTGTGTCTTTGTGAGAGCCACGTCTTTGGCAGCTCATACAGCTGCTGCTGCTTTGTCTAGAGGCTTGAGGGCAGTTGCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131252.8 |
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| 3UTR GCA 90 bp | TCATCTTCCCGTAGAGTGCCATTCAAGCGAGCCAACTCTCGAAGCTaGATTTTCCGTAGATCGTTCTGGTCCTCTGGGGTCTCAATACCC | + |
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Preference number: 1 (lower is better) Translates to: SSSRRVPFKRANSRS*IFRRSFWSSGVSIP Trigger: GGGTATTGAGACCCCAGAGGACCAGAACGATCTACGGAAAATGCAGCTTCGAGAGTTGGCTCGCTTGAATGGCACTCTACGGGAAGATGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113485.9 |
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| 3UTR GCA 90 bp | GGAAGCAATGAGGTAAAGCCAAGGTCGAAGAGGGTGGCCAGGCCCTaGCCCCACACTGTAAGGTTAAAGACAATAGGGAAAACCTCTAGT | + |
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Preference number: 1 (lower is better) Translates to: GSNEVKPRSKRVARP*PHTVRLKTIGKTSS Trigger: ACTAGAGGTTTTCCCTATTGTCTTTAACCTTACAGTGTGGGGGCAGGGCCTGGCCACCCTCTTCGACCTTGGCTTTACCTCATTGCTTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131252.8 |
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| 3UTR GCA 90 bp | AACTGCCCTCAAGCCTCTAGACAAAGCAGCAGCAGCTGTATGAGCTaGCAAAGACGTGGCTCTCACAAAGACACAAGGGGTGATTTTCCT | + |
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Preference number: 1 (lower is better) Translates to: NCPQASRQSSSSCMS*QRRGSHKDTRGDFP Trigger: AGGAAAATCACCCCTTGTGTCTTTGTGAGAGCCACGTCTTTGGCAGCTCATACAGCTGCTGCTGCTTTGTCTAGAGGCTTGAGGGCAGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131252.8 |
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| 3UTR CCA 90 bp | TTCAAGCGAGCCAACTCTCGAAGCTGCATTTTCCGTAGATCGTTCTaGTCCTCTGGGGTCTCAATACCCTGCTTCAGGATGTTTCTGATC | + |
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Preference number: 1 (lower is better) Translates to: FKRANSRSCIFRRSF*SSGVSIPCFRMFLI Trigger: GATCAGAAACATCCTGAAGCAGGGTATTGAGACCCCAGAGGACCAGAACGATCTACGGAAAATGCAGCTTCGAGAGTTGGCTCGCTTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113485.9 |
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| 3UTR GCA 90 bp | GTGCCCTGTACTGCTGGCAGGAGTGCAGGAAGATGTGAATCCCACTaGCAAATAAACCCTATTGAGCAACGAGTCAGATTTATCCAGACT | + |
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Preference number: 1 (lower is better) Translates to: VPCTAGRSAGRCESH*QINPIEQRVRFIQT Trigger: AGTCTGGATAAATCTGACTCGTTGCTCAATAGGGTTTATTTGGCAGTGGGATTCACATCTTCCTGCACTCCTGCCAGCAGTACAGGGCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000113485.9 ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000131252.8 |
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| 3UTR GCA 90 bp | TTGGTACACACAGTAGTATTGGTAATGCTGCGCGTCTCTGAGCTCTaGCAGGGCCTTAAGATCCTATTATCATCTTCCCGTAGAGTGCCA | + |
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Preference number: 1 (lower is better) Translates to: LVHTVVLVMLRVSEL*QGLKILLSSSRRVP Trigger: TGGCACTCTACGGGAAGATGATAATAGGATCTTAAGGCCCTGGCAGAGCTCAGAGACGCGCAGCATTACCAATACTACTGTGTGTACCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113485.9 |
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| 3UTR CCA 90 bp | ATTAATAGCCAAAGCCTGTACCTAAACCATTTGCCCCTCTCCCTTTaGGAGGAGAGGAATGGAGACAAGGGAAGGATCCTATCTGCAGCA | + |
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Preference number: 1 (lower is better) Translates to: INSQSLYLNHLPLSL*EERNGDKGRILSAA Trigger: TGCTGCAGATAGGATCCTTCCCTTGTCTCCATTCCTCTCCTCCCAAAGGGAGAGGGGCAAATGGTTTAGGTACAGGCTTTGGCTATTAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000113485.9 ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000125516.8 ENSMUST00000131252.8 |
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| 3UTR TCA 90 bp | TGGCAACATCTGACCATCTTTACGCCCAACTTTCCCTTCTTTCACTaGTCCTTTCCCCCGAATCATGATCTTGGCGTTGCATTCCTTCTC | + |
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Preference number: 1 (lower is better) Translates to: WQHLTIFTPNFPFFH*SFPPNHDLGVAFLL Trigger: GAGAAGGAATGCAACGCCAAGATCATGATTCGGGGGAAAGGATCAGTGAAAGAAGGGAAAGTTGGGCGTAAAGATGGTCAGATGTTGCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000113485.9 ENSMUST00000144409.8 |
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| 3UTR TCA 90 bp | CACACACAATCACATGCGTGCATCCCAATGTCTGGCTCCATATGGTaGGGTTCGGCGTGTGTTTATAAGAGACCAACTCTCTATGTATAT | + |
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Preference number: 1 (lower is better) Translates to: HTQSHACIPMSGSIW*GSACVYKRPTLYVY Trigger: ATATACATAGAGAGTTGGTCTCTTATAAACACACGCCGAACCTCACCATATGGAGCCAGACATTGGGATGCACGCATGTGATTGTGTGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113485.9 ENSMUST00000131252.8 |
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| 3UTR GCA 90 bp | AAGTCATTTATTGATTTTACTTCTAAAACCCACACAGCGCCACTTTaGCGCTTCCAGAGCTTCAAAGAGCTAATTAACCGCCCAATGAGC | + |
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Preference number: 1 (lower is better) Translates to: KSFIDFTSKTHTAPL*RFQSFKELINRPMS Trigger: GCTCATTGGGCGGTTAATTAGCTCTTTGAAGCTCTGGAAGCGGCAAAGTGGCGCTGTGTGGGTTTTAGAAGTAAAATCAATAAATGACTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131252.8 |
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| 3UTR-3UTR CCA 90 bp | GGAGGCGGGGGCTGCCCACTGGGAGGTGGCGGAGGCGGCGGCATCATGCCCATACTCCAGGCTGGCCTATaGTGGCTTGGGCTGTGCCCT | + |
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Preference number: 2 (lower is better) Translates to: GGGGCPLGGGGGGGIMPILQAGL*WLGLCP Trigger: AGGGCACAGCCCAAGCCACCATAGGCCAGCCTGGAG...TATGGGCATGATGCCGCCGCCTCCGCCACCTCCCAGTGGGCAGCCCCCGCCTCC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113485.9 |
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| 3UTR-3UTR GCA 90 bp | GGAGGCGGGGGCTGCCCACTGGGAGGTGGCGGAGGCGGCGGCATCATGCCCATAGGGAAGGATCCTATCTaGAGCAGAAGACCGGGGAGA | + |
|
Preference number: 2 (lower is better) Translates to: GGGGCPLGGGGGGGIMPIGKDPI*SRRPGR Trigger: TCTCCCCGGTCTTCTGCTGCAGATAGGATCCTTCCC...TATGGGCATGATGCCGCCGCCTCCGCCACCTCCCAGTGGGCAGCCCCCGCCTCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113485.9 |
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| 3UTR-3UTR CCA 90 bp | AGGGGTTCCTGGAGAAGCTGCGGCAGCCGCCTGCTGCTGTTGCCATGGCGGGATGGTGGGTGGGGGCCCTaGTTCATCGGTGGTGGTGGT | + |
|
Preference number: 2 (lower is better) Translates to: RGSWRSCGSRLLLLPWRDGGWGP*FIGGGG Trigger: ACCACCACCACCGATGAACCAGGGCCCCCACCCACC...ATCCCGCCATGGCAACAGCAGCAGGCGGCTGCCGCAGCTTCTCCAGGAACCCCT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113485.9 |
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| 3UTR CAA 90 bp | CATCTGAGGGGTTCCTGGAGAAGCTGCGGCAGCCGCCTGCTGCTGTaGCCATGGCGGGATGGACCCTGTGCCAGCGCTCGTGGTGGTAGT | + |
|
Preference number: 2 (lower is better) Translates to: HLRGSWRSCGSRLLL*PWRDGPCASARGGS Trigger: ACTACCACCACGAGCGCTGGCACAGGGTCCATCCCGCCATGGCAACAGCAGCAGGCGGCTGCCGCAGCTTCTCCAGGAACCCCTCAGATG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113485.9 |
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| 3UTR-3UTR GCA 90 bp | TCGATGCTACAGGTGCCAGGAAAGCTCAAGCTGGCGCCCCACTACCACTGCCCGGCCGCCTGCTGCTGTTaGCATGGCGGGATGGACCCT | + |
|
Preference number: 2 (lower is better) Translates to: SMLQVPGKLKLAPHYHCPAACCC*HGGMDP Trigger: AGGGTCCATCCCGCCATGGCAACAGCAGCAGGCGGC...CGGGCAGTGGTAGTGGGGCGCCAGCTTGAGCTTTCCTGGCACCTGTAGCATCGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113485.9 |
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| 3UTR-3UTR TCA 90 bp | GGGAAGGATCCTATCTGCAGCAGAAGACCGGGGAGAGCATCTCCTTGGACGGAGCACCAGGGGCGCTGCTaGGGCTGTCTGCCTGGAAGG | + |
|
Preference number: 2 (lower is better) Translates to: GKDPICSRRPGRASPWTEHQGRC*GCLPGR Trigger: CCTTCCAGGCAGACAGCCTCAGCAGCGCCCCTGGTG...CTCCGTCCAAGGAGATGCTCTCCCCGGTCTTCTGCTGCAGATAGGATCCTTCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000113485.9 ENSMUST00000113487.8 ENSMUST00000131252.8 |
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| 3UTR CAA 90 bp | GGTGGTGGTGGTGGCTGCATCCAAGGTGGTGGTGGTCCATTTGGGTaGTGCTGCATGGGATGCCCACCATGCCCACCTGTCAGGCTGGGT | + |
|
Preference number: 2 (lower is better) Translates to: GGGGGCIQGGGGPFG*CCMGCPPCPPVRLG Trigger: ACCCAGCCTGACAGGTGGGCATGGTGGGCATCCCATGCAGCACAACCCAAATGGACCACCACCACCTTGGATGCAGCCACCACCACCACC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113485.9 |
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| 3UTR CAA 90 bp | TCATCGGTGGTGGTGGTGGCTGCATCCAAGGTGGTGGTGGTCCATTaGGGTTGTGCTGCATGGGATGCCCACCATGCCCACCTGTCAGGC | + |
|
Preference number: 2 (lower is better) Translates to: SSVVVVAASKVVVVH*GCAAWDAHHAHLSG Trigger: GCCTGACAGGTGGGCATGGTGGGCATCCCATGCAGCACAACCCAAATGGACCACCACCACCTTGGATGCAGCCACCACCACCACCGATGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113485.9 |
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| 3UTR-3UTR GCA 90 bp | ATGGGATGCCCACCATGCCCACCTGTCAGGCTGGGTAATGGGTGTGGGAAGCTGAGCAGCAGGTCTTGGTaGACTAGCCAGGGGCGTGGT | + |
|
Preference number: 2 (lower is better) Translates to: MGCPPCPPVRLGNGCGKLSSRSW*TSQGRG Trigger: ACCACGCCCCTGGCTAGTGCACCAAGACCTGCTGCT...CAGCTTCCCACACCCATTACCCAGCCTGACAGGTGGGCATGGTGGGCATCCCAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113485.9 |
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| 3UTR-3UTR CCA 90 bp | TGCCAGGAAAGCTCAAGCTGGCGCCCCACTACCACTGCCCGTTTCCCAAGCGAGTGGCCTATGGTGGCTTaGGCTGTGCCCTGTACTGCT | + |
|
Preference number: 2 (lower is better) Translates to: CQESSSWRPTTTARFPSEWPMVA*AVPCTA Trigger: AGCAGTACAGGGCACAGCCCAAGCCACCATAGGCCA...CTCGCTTGGGAAACGGGCAGTGGTAGTGGGGCGCCAGCTTGAGCTTTCCTGGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113485.9 ENSMUST00000131252.8 |
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| 3UTR-3UTR CCA 90 bp | ATGGGATGCCCACCATGCCCACCTGTCAGGCTGGGTAATGGGTGTGGGAAGCTGCATGAGAGACGGTGGTaGTGGGTTGCTGGCAGGAGC | + |
|
Preference number: 2 (lower is better) Translates to: MGCPPCPPVRLGNGCGKLHERRW*WVAGRS Trigger: GCTCCTGCCAGCAACCCACCACCACCGTCTCTCATG...CAGCTTCCCACACCCATTACCCAGCCTGACAGGTGGGCATGGTGGGCATCCCAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113485.9 |
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| 3UTR-3UTR TCA 90 bp | TGCCAGGAAAGCTCAAGCTGGCGCCCCACTACCACTGCCCGTTTCCCAAGCGAGGAAGCAAATGGGTTCTaGGGCAGCTTGGGTGACCAG | + |
|
Preference number: 2 (lower is better) Translates to: CQESSSWRPTTTARFPSEEANGF*GSLGDQ Trigger: CTGGTCACCCAAGCTGCCTCAGAACCCATTTGCTTC...CTCGCTTGGGAAACGGGCAGTGGTAGTGGGGCGCCAGCTTGAGCTTTCCTGGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113485.9 ENSMUST00000131252.8 |
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| 3UTR-3UTR GCA 90 bp | GCCAGCGCTCGTGGTGGTAGTCGTCGTATTTTGCTGCCATGGCAAGGGGGTGCTTTGTGCTGCATGGGATaGCCACCATGCCCACCTGTC | + |
|
Preference number: 2 (lower is better) Translates to: ASARGGSRRILLPWQGGALCCMG*PPCPPV Trigger: GACAGGTGGGCATGGTGGGCATCCCATGCAGCACAA...AGCACCCCCTTGCCATGGCAGCAAAATACGACGACTACCACCACGAGCGCTGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113485.9 |
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| 3UTR-3UTR CCA 90 bp | AAGCGAGTCCAGTCACTTGGCCCAGCCCAGTGCGTGCACACACACACATGCGTGGTTCATCGGTGGTGGTaGTGGCTGCATCCAAGGTGG | + |
|
Preference number: 2 (lower is better) Translates to: KRVQSLGPAQCVHTHTCVVHRWW*WLHPRW Trigger: CCACCTTGGATGCAGCCACCACCACCACCGATGAAC...CACGCATGTGTGTGTGTGCACGCACTGGGCTGGGCCAAGTGACTGGACTCGCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113485.9 |
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| 3UTR-3UTR CCA 90 bp | TCGTATTTTGCTGCCATGGCAAGGGGGTGCTGGAAGCCATACTGCTGCTGGGCGTTGGGTTGTGCTGCATaGGATGCCCACCATGCCCAC | + |
|
Preference number: 2 (lower is better) Translates to: SYFAAMARGCWKPYCCWALGCAA*DAHHAH Trigger: GTGGGCATGGTGGGCATCCCATGCAGCACAACCCAA...CGCCCAGCAGCAGTATGGCTTCCAGCACCCCCTTGCCATGGCAGCAAAATACGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113485.9 |
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| 3UTR-3UTR TCA 90 bp | ATGGAGCCAGTGTGTTCCGATTCCGTCCACAAAAATAACTCAGGCTGCTTTGCCCACCAGGGGCGCTGCTaGGGCTGTCTGCCTGGAAGG | + |
|
Preference number: 2 (lower is better) Translates to: MEPVCSDSVHKNNSGCFAHQGRC*GCLPGR Trigger: CCTTCCAGGCAGACAGCCTCAGCAGCGCCCCTGGTG...GGCAAAGCAGCCTGAGTTATTTTTGTGGACGGAATCGGAACACACTGGCTCCAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000113485.9 ENSMUST00000113487.8 ENSMUST00000124667.2 ENSMUST00000131252.8 |
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| 3UTR-3UTR TCA 90 bp | TGGCTTGGGCTGTGCCCTGTACTGCTGGCAGGAGTGCAGGAAGATGTGAATCCCGAAGCAAATGGGTTCTaGGGCAGCTTGGGTGACCAG | + |
|
Preference number: 2 (lower is better) Translates to: WLGLCPVLLAGVQEDVNPEANGF*GSLGDQ Trigger: CTGGTCACCCAAGCTGCCTCAGAACCCATTTGCTTC...GGGATTCACATCTTCCTGCACTCCTGCCAGCAGTACAGGGCACAGCCCAAGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000113485.9 ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000131252.8 |
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| 3UTR-3UTR TCA 90 bp | ATGGGATGCCCACCATGCCCACCTGTCAGGCTGGGTAATGGGTGTGGGAAGCTGTCGCCTGGCAACATCTaGCCATCTTTACGCCCAACT | + |
|
Preference number: 2 (lower is better) Translates to: MGCPPCPPVRLGNGCGKLSPGNI*PSLRPT Trigger: AGTTGGGCGTAAAGATGGTCAGATGTTGCCAGGCGA...CAGCTTCCCACACCCATTACCCAGCCTGACAGGTGGGCATGGTGGGCATCCCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113485.9 |
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| 3UTR-3UTR GCA 90 bp | GAGAGGAATGGAGACAAGGGAAGGATCCTATCTGCAGCAGAAGACCGGGGAGAGTGGTGGCTTGGGCTGTaGCCTGTACTGCTGGCAGGA | + |
|
Preference number: 2 (lower is better) Translates to: ERNGDKGRILSAAEDRGEWWLGL*PVLLAG Trigger: TCCTGCCAGCAGTACAGGGCACAGCCCAAGCCACCA...CTCTCCCCGGTCTTCTGCTGCAGATAGGATCCTTCCCTTGTCTCCATTCCTCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113485.9 ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000131252.8 |
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| 3UTR-3UTR GCA 90 bp | AATGGAGACAAGGGAAGGATCCTATCTGCAGCAGAAGACCGGGGAGAGCATCTCGCGCCCCACTACCACTaGCCGTTTCCCAAGCGAGTC | + |
|
Preference number: 2 (lower is better) Translates to: NGDKGRILSAAEDRGEHLAPHYH*PFPKRV Trigger: GACTCGCTTGGGAAACGGGCAGTGGTAGTGGGGCGC...GAGATGCTCTCCCCGGTCTTCTGCTGCAGATAGGATCCTTCCCTTGTCTCCATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000113485.9 ENSMUST00000131252.8 |
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| 3UTR-3UTR CCA 90 bp | TCGATGCTACAGGTGCCAGGAAAGCTCAAGCTGGCGCCCCACTACCACTGCCCGAAGGAGAGAAGCAAATaGGTTCTGAGGCAGCTTGGG | + |
|
Preference number: 2 (lower is better) Translates to: SMLQVPGKLKLAPHYHCPKERSK*VLRQLG Trigger: CCCAAGCTGCCTCAGAACCCATTTGCTTCTCTCCTT...CGGGCAGTGGTAGTGGGGCGCCAGCTTGAGCTTTCCTGGCACCTGTAGCATCGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113485.9 ENSMUST00000131252.8 |
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| 3UTR-3UTR TCA 90 bp | CAGTGTGTTCCGATTCCGTCCACAAAAATAACTCAGGCTGCTTTGCCGAACCATCACCAGGGGCGCTGCTaGGGCTGTCTGCCTGGAAGG | + |
|
Preference number: 2 (lower is better) Translates to: QCVPIPSTKITQAALPNHHQGRC*GCLPGR Trigger: CCTTCCAGGCAGACAGCCTCAGCAGCGCCCCTGGTG...ATGGTTCGGCAAAGCAGCCTGAGTTATTTTTGTGGACGGAATCGGAACACACTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000113485.9 ENSMUST00000113487.8 ENSMUST00000124667.2 ENSMUST00000131252.8 |
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| 3UTR-3UTR TCA 90 bp | TGGCTTGGGCTGTGCCCTGTACTGCTGGCAGGAGTGCAGGAAGATGTGAATCCCCTGAGGCAGCTTGGGTaGCCAGAGCATGAAAAAGAC | + |
|
Preference number: 2 (lower is better) Translates to: WLGLCPVLLAGVQEDVNPLRQLG*PEHEKD Trigger: GTCTTTTTCATGCTCTGGTCACCCAAGCTGCCTCAG...GGGATTCACATCTTCCTGCACTCCTGCCAGCAGTACAGGGCACAGCCCAAGCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000113485.9 ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000131252.8 |
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| 3UTR-3UTR GCA 90 bp | GAGAGGAATGGAGACAAGGGAAGGATCCTATCTGCAGCAGAAGACCGGGGAGAGGCTGCTGAGGCTGTCTaGCTGGAAGGGTCACCAATG | + |
|
Preference number: 2 (lower is better) Translates to: ERNGDKGRILSAAEDRGEAAEAV*LEGSPM Trigger: CATTGGTGACCCTTCCAGGCAGACAGCCTCAGCAGC...CTCTCCCCGGTCTTCTGCTGCAGATAGGATCCTTCCCTTGTCTCCATTCCTCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113485.9 ENSMUST00000131252.8 |
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| 3UTR-3UTR CCA 90 bp | GGGAAGGAAGGGGCAAAGCAGCAGAACGAAGAACAAGGGACACAAGCCCCAGACTGTGCCCTGTACTGCTaGCAGGAGTGCAGGAAGATG | + |
|
Preference number: 2 (lower is better) Translates to: GKEGAKQQNEEQGTQAPDCALYC*QECRKM Trigger: CATCTTCCTGCACTCCTGCCAGCAGTACAGGGCACA...GTCTGGGGCTTGTGTCCCTTGTTCTTCGTTCTGCTGCTTTGCCCCTTCCTTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000113485.9 ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000131252.8 |
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| 3UTR-3UTR TCA 90 bp | GCCAAGGTCGAAGAGGGTGGCCAGGCCCTGCCCCCACACTGTAAGGTTAAAGACAACATAATCACTCCATaGAGAGGGAAGGAAGGGGCA | + |
|
Preference number: 2 (lower is better) Translates to: AKVEEGGQALPPHCKVKDNIITP*RGKEGA Trigger: TGCCCCTTCCTTCCCTCTTCATGGAGTGATTATGTT...GTCTTTAACCTTACAGTGTGGGGGCAGGGCCTGGCCACCCTCTTCGACCTTGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000131252.8 |
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| 3UTR-3UTR TCA 90 bp | GTCGTATTTTGCTGCCATGGCAAGGGGGTGCTGGAAGCCATACTGCTGCTGGGCCCATCGTATTGGCAGTaGCTAGAGCATGAAGAGGCT | + |
|
Preference number: 2 (lower is better) Translates to: VVFCCHGKGVLEAILLLGPSYWQ*LEHEEA Trigger: AGCCTCTTCATGCTCTAGTCACTGCCAATACGATGG...GCCCAGCAGCAGTATGGCTTCCAGCACCCCCTTGCCATGGCAGCAAAATACGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113485.9 |
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| 3UTR-3UTR GCA 90 bp | ATGGAGACAAGGGAAGGATCCTATCTGCAGCAGAAGACCGGGGAGAGCATCTCCGGGAAGGATCCTATCTaGAGCAGAAGACCGGGGAGA | + |
|
Preference number: 2 (lower is better) Translates to: METREGSYLQQKTGESISGKDPI*SRRPGR Trigger: TCTCCCCGGTCTTCTGCTGCAGATAGGATCCTTCCC...GGAGATGCTCTCCCCGGTCTTCTGCTGCAGATAGGATCCTTCCCTTGTCTCCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000113485.9 ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000125516.8 ENSMUST00000131252.8 |
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| 3UTR-3UTR CCA 90 bp | GGAAGGAAGGGGCAAAGCAGCAGAACGAAGAACAAGGGACACAAGCCCCAGACATTGCCCCTCTCCCTTTaGGAGGAGAGGAATGGAGAC | + |
|
Preference number: 2 (lower is better) Translates to: GRKGQSSRTKNKGHKPQTLPLSL*EERNGD Trigger: GTCTCCATTCCTCTCCTCCCAAAGGGAGAGGGGCAA...TGTCTGGGGCTTGTGTCCCTTGTTCTTCGTTCTGCTGCTTTGCCCCTTCCTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000113485.9 ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000131252.8 |
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| 3UTR-3UTR GCA 90 bp | TGGCTTGGGCTGTGCCCTGTACTGCTGGCAGGAGTGCAGGAAGATGTGAATCCCAAAGAAGACACTCGATaGTACAGGTGCCAGGAAAGC | + |
|
Preference number: 2 (lower is better) Translates to: WLGLCPVLLAGVQEDVNPKEDTR*YRCQES Trigger: GCTTTCCTGGCACCTGTAGCATCGAGTGTCTTCTTT...GGGATTCACATCTTCCTGCACTCCTGCCAGCAGTACAGGGCACAGCCCAAGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113485.9 ENSMUST00000131252.8 |
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| 3UTR-3UTR CCA 90 bp | TTGGTACACACAGTAGTATTGGTAATGCTGCGCGTCTCTGAGCTCTGCCAGGGCTTGCCCCTCTCCCTTTaGGAGGAGAGGAATGGAGAC | + |
|
Preference number: 2 (lower is better) Translates to: LVHTVVLVMLRVSELCQGLPLSL*EERNGD Trigger: GTCTCCATTCCTCTCCTCCCAAAGGGAGAGGGGCAA...GCCCTGGCAGAGCTCAGAGACGCGCAGCATTACCAATACTACTGTGTGTACCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113485.9 |
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| 3UTR-3UTR TCA 90 bp | AAGGAAGGGGCAAAGCAGCAGAACGAAGAACAAGGGACACAAGCCCCAGACACTGCAGTGACTAGAGCATaGAGAGGCTCATCTTCGCCT | + |
|
Preference number: 2 (lower is better) Translates to: KEGAKQQNEEQGTQAPDTAVTRA*RGSSSP Trigger: AGGCGAAGATGAGCCTCTTCATGCTCTAGTCACTGC...AGTGTCTGGGGCTTGTGTCCCTTGTTCTTCGTTCTGCTGCTTTGCCCCTTCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113485.9 |
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| 3UTR-3UTR GCA 90 bp | GCCAGCGCTCGTGGTGGTAGTCGTCGTATTTTGCTGCCATGGCAAGGGGGTGCTAAAAATAACTCAGGCTaGTTTGCCGAACCATCCTGT | + |
|
Preference number: 2 (lower is better) Translates to: ASARGGSRRILLPWQGGAKNNSG*FAEPSC Trigger: ACAGGATGGTTCGGCAAAGCAGCCTGAGTTATTTTT...AGCACCCCCTTGCCATGGCAGCAAAATACGACGACTACCACCACGAGCGCTGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000113485.9 |
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| 3UTR-3UTR GCA 90 bp | AGAACGCGCATTACACATTATTATCAACATAATCACTCCATGAAGAGGGAAGGAGGCTCGGGCCATCGCTaGCGCGGGGAGGGATCCTGG | + |
|
Preference number: 2 (lower is better) Translates to: RTRITHYYQHNHSMKREGGSGHR*RGEGSW Trigger: CCAGGATCCCTCCCCGCGGCAGCGATGGCCCGAGCC...TCCTTCCCTCTTCATGGAGTGATTATGTTGATAATAATGTGTAATGCGCGTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113485.9 ENSMUST00000131252.8 |
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| 3UTR-3UTR CCA 90 bp | AAGGAAGGGGCAAAGCAGCAGAACGAAGAACAAGGGACACAAGCCCCAGACACTGGGAGAGCATCTCCTTaGACGGAGTCTGAAGAAAGG | + |
|
Preference number: 2 (lower is better) Translates to: KEGAKQQNEEQGTQAPDTGRASP*TESEER Trigger: CCTTTCTTCAGACTCCGTCCAAGGAGATGCTCTCCC...AGTGTCTGGGGCTTGTGTCCCTTGTTCTTCGTTCTGCTGCTTTGCCCCTTCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000113485.9 ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000131252.8 |
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| 3UTR-3UTR TCA 90 bp | CAGAGCATGAAAAAGACTCCAGGCTGGCCTATGGTGGCTTGGGCTGTGCCCTGTTCCTTGGACGGAGTCTaGAGAAAGGAAAAGATAAGG | + |
|
Preference number: 2 (lower is better) Translates to: QSMKKTPGWPMVAWAVPCSLDGV*RKEKIR Trigger: CCTTATCTTTTCCTTTCTTCAGACTCCGTCCAAGGA...ACAGGGCACAGCCCAAGCCACCATAGGCCAGCCTGGAGTCTTTTTCATGCTCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000113485.9 ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000131252.8 |
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| 3UTR-3UTR GCA 90 bp | GAGAGGAATGGAGACAAGGGAAGGATCCTATCTGCAGCAGAAGACCGGGGAGAGAAAGAAGACACTCGATaGTACAGGTGCCAGGAAAGC | + |
|
Preference number: 2 (lower is better) Translates to: ERNGDKGRILSAAEDRGEKEDTR*YRCQES Trigger: GCTTTCCTGGCACCTGTAGCATCGAGTGTCTTCTTT...CTCTCCCCGGTCTTCTGCTGCAGATAGGATCCTTCCCTTGTCTCCATTCCTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113485.9 ENSMUST00000131252.8 |
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| 3UTR CAA 90 bp | ACCACCAAGCCTGACATTAATAGCCAAAGCCTGTACCTAAACCATTaGCCCCTCTCCCTTTGGGAGGAGAGGAATGGAGACAAGGGAAGG | + |
|
Preference number: 2 (lower is better) Translates to: TTKPDINSQSLYLNH*PLSLWEERNGDKGR Trigger: CCTTCCCTTGTCTCCATTCCTCTCCTCCCAAAGGGAGAGGGGCAAATGGTTTAGGTACAGGCTTTGGCTATTAATGTCAGGCTTGGTGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113485.9 ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000131252.8 |
||
| 3UTR-3UTR GCA 90 bp | GGTGACCAGAGCATGAAAAAGACTCCAGGCTGGCCTATGGTGGCTTGGGCTGTGAAAAATAACTCAGGCTaGTTTGCCGAACCATCCTGT | + |
|
Preference number: 2 (lower is better) Translates to: GDQSMKKTPGWPMVAWAVKNNSG*FAEPSC Trigger: ACAGGATGGTTCGGCAAAGCAGCCTGAGTTATTTTT...CACAGCCCAAGCCACCATAGGCCAGCCTGGAGTCTTTTTCATGCTCTGGTCACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000113485.9 ENSMUST00000113487.8 ENSMUST00000131252.8 |
||
| 3UTR-3UTR TCA 90 bp | TGTGCCCGACAAGCAGGATTAGTTAGCGTGACCTTTAGTGCTGATGCCTCCCCAGAGTGCAGGAAGATGTaGATCCCACTGCCAAATAAA | + |
|
Preference number: 2 (lower is better) Translates to: CARQAGLVSVTFSADASPECRKM*IPLPNK Trigger: TTTATTTGGCAGTGGGATTCACATCTTCCTGCACTC...TGGGGAGGCATCAGCACTAAAGGTCACGCTAACTAATCCTGCTTGTCGGGCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131252.8 |
||
| 3UTR-3UTR CCA 90 bp | GCACACACAATCACATGCGTGCATCCCAATGTCTGGCTCCATATGGTGAGGTTCTTCCGTAGATCGTTCTaGTCCTCTGGGGTCTCAATA | + |
|
Preference number: 2 (lower is better) Translates to: AHTITCVHPNVWLHMVRFFRRSF*SSGVSI Trigger: TATTGAGACCCCAGAGGACCAGAACGATCTACGGAA...GAACCTCACCATATGGAGCCAGACATTGGGATGCACGCATGTGATTGTGTGTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113485.9 |
||
| 3UTR-3UTR TCA 90 bp | CAGAGCATGAAAAAGACTCCAGGCTGGCCTATGGTGGCTTGGGCTGTGCCCTGTTATTTTGAATGTGGCTaGAGCCCTTCAACAATTAGA | + |
|
Preference number: 2 (lower is better) Translates to: QSMKKTPGWPMVAWAVPCYFECG*SPSTIR Trigger: TCTAATTGTTGAAGGGCTTCAGCCACATTCAAAATA...ACAGGGCACAGCCCAAGCCACCATAGGCCAGCCTGGAGTCTTTTTCATGCTCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000113485.9 ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000131252.8 |
||
| 3UTR-3UTR CCA 90 bp | AGAACGCGCATTACACATTATTATCAACATAATCACTCCATGAAGAGGGAAGGACTCCAGGCTGGCCTATaGTGGCTTGGGCTGTGCCCT | + |
|
Preference number: 2 (lower is better) Translates to: RTRITHYYQHNHSMKREGLQAGL*WLGLCP Trigger: AGGGCACAGCCCAAGCCACCATAGGCCAGCCTGGAG...TCCTTCCCTCTTCATGGAGTGATTATGTTGATAATAATGTGTAATGCGCGTTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000113485.9 ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000131252.8 |
||
| 3UTR-3UTR TCA 90 bp | GCACACACAATCACATGCGTGCATCCCAATGTCTGGCTCCATATGGTGAGGTTCGCTTCAGGATGTTTCTaGTCTGTTCTACTGCCTTTT | + |
|
Preference number: 2 (lower is better) Translates to: AHTITCVHPNVWLHMVRFASGCF*SVLLPF Trigger: AAAAGGCAGTAGAACAGATCAGAAACATCCTGAAGC...GAACCTCACCATATGGAGCCAGACATTGGGATGCACGCATGTGATTGTGTGTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113485.9 |
||
| 3UTR-3UTR CCA 90 bp | AGAACGCGCATTACACATTATTATCAACATAATCACTCCATGAAGAGGGAAGGATGTGCCCTGTACTGCTaGCAGGAGTGCAGGAAGATG | + |
|
Preference number: 2 (lower is better) Translates to: RTRITHYYQHNHSMKREGCALYC*QECRKM Trigger: CATCTTCCTGCACTCCTGCCAGCAGTACAGGGCACA...TCCTTCCCTCTTCATGGAGTGATTATGTTGATAATAATGTGTAATGCGCGTTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000113485.9 ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000131252.8 |
||
| 3UTR-3UTR GCA 90 bp | AAGATGTCAAAGATAAACCACCTACTTATTTTGAATGTGGCTGAAGCCCTTCAACGCGTCTCTGAGCTCTaGCAGGGCCTTAAGATCCTA | + |
|
Preference number: 2 (lower is better) Translates to: KMSKINHLLILNVAEALQRVSEL*QGLKIL Trigger: TAGGATCTTAAGGCCCTGGCAGAGCTCAGAGACGCG...TTGAAGGGCTTCAGCCACATTCAAAATAAGTAGGTGGTTTATCTTTGACATCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113485.9 |
||
| 3UTR-3UTR CCA 90 bp | AAACCAGTGAAAAGAACGCGCATTACACATTATTATCAACATAATCACTCCATGTGGCCTATGGTGGCTTaGGCTGTGCCCTGTACTGCT | + |
|
Preference number: 2 (lower is better) Translates to: KPVKRTRITHYYQHNHSMWPMVA*AVPCTA Trigger: AGCAGTACAGGGCACAGCCCAAGCCACCATAGGCCA...CATGGAGTGATTATGTTGATAATAATGTGTAATGCGCGTTCTTTTCACTGGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113485.9 ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000131252.8 |
||
| 3UTR-3UTR CCA 90 bp | ATGAAGAGGCTCATCTTCGCCTGGCAACATCTGACCATCTTTACGCCCAACTTTCACAAAATTGATTTCTaGATATTCGTCTTGGGGGAT | + |
|
Preference number: 2 (lower is better) Translates to: MKRLIFAWQHLTIFTPNFHKIDF*IFVLGD Trigger: ATCCCCCAAGACGAATATCCAGAAATCAATTTTGTG...AAAGTTGGGCGTAAAGATGGTCAGATGTTGCCAGGCGAAGATGAGCCTCTTCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000113485.9 ENSMUST00000144409.8 |
||
| 3UTR-3UTR TCA 90 bp | AAGATGTCAAAGATAAACCACCTACTTATTTTGAATGTGGCTGAAGCCCTTCAATCCTTGGACGGAGTCTaGAGAAAGGAAAAGATAAGG | + |
|
Preference number: 2 (lower is better) Translates to: KMSKINHLLILNVAEALQSLDGV*RKEKIR Trigger: CCTTATCTTTTCCTTTCTTCAGACTCCGTCCAAGGA...TTGAAGGGCTTCAGCCACATTCAAAATAAGTAGGTGGTTTATCTTTGACATCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000113485.9 ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000131252.8 |
||
| 3UTR-3UTR TCA 90 bp | AAAAGAACGCGCATTACACATTATTATCAACATAATCACTCCATGAAGAGGGAAGAGTGCAGGAAGATGTaGATCCCACTGCCAAATAAA | + |
|
Preference number: 2 (lower is better) Translates to: KRTRITHYYQHNHSMKREECRKM*IPLPNK Trigger: TTTATTTGGCAGTGGGATTCACATCTTCCTGCACTC...TTCCCTCTTCATGGAGTGATTATGTTGATAATAATGTGTAATGCGCGTTCTTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113485.9 ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000131252.8 |
||
| 3UTR GCA 72 bp | GCGGAAAGTCCTCACTCTCATGGCTCGGGCCATCGCTaGCGCGGGGAGGGATCCTGGCGGCCCGGTTTGGGG | + |
|
Preference number: 3 (lower is better) Translates to: AESPHSHGSGHR*RGEGSWRPGLG Trigger: CCCCAAACCGGGCCGCCAGGATCCCTCCCCGCGGCAGCGATGGCCCGAGCCATGAGAGTGAGGACTTTCCGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113485.9 ENSMUST00000131252.8 |
||
| 3UTR GCA 72 bp | GTTCCTGGAGAAGCTGCGGCAGCCGCCTGCTGCTGTTaGCATGGCGGGATGGACCCTGTGCCAGCGCTCGTG | + |
|
Preference number: 3 (lower is better) Translates to: VPGEAAAAACCC*HGGMDPVPALV Trigger: CACGAGCGCTGGCACAGGGTCCATCCCGCCATGGCAACAGCAGCAGGCGGCTGCCGCAGCTTCTCCAGGAAC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113485.9 |
||
| 3UTR CCA 72 bp | ACAAGTCTAGTTCTGTGGTGGAGGCGGTGGGGGAGCTaGAGGCATCCCGAAGGGCGGCATGCCCGCCACCCC | + |
|
Preference number: 3 (lower is better) Translates to: TSLVLWWRRWGS*RHPEGRHARHP Trigger: GGGGTGGCGGGCATGCCGCCCTTCGGGATGCCTCCAGCTCCCCCACCGCCTCCACCACAGAACTAGACTTGT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113485.9 |
||
| 3UTR GCA 72 bp | TTTGCTGCCATGGCAAGGGGGTGCTGGAAGCCATACTaGTGCTGGGCGGAGGGGGTGGCGGAGGCTGCTGCT | + |
|
Preference number: 3 (lower is better) Translates to: FAAMARGCWKPY*CWAEGVAEAAA Trigger: AGCAGCAGCCTCCGCCACCCCCTCCGCCCAGCAGCAGTATGGCTTCCAGCACCCCCTTGCCATGGCAGCAAA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000113485.9 |
||
| 3UTR CCA 72 bp | AGGGTCACCAATGGGCGCGGAAAGTCCTCACTCTCATaGCTCGGGCCATCGCTGCCGCGGGGAGGGATCCTG | + |
|
Preference number: 3 (lower is better) Translates to: RVTNGRGKSSLS*LGPSLPRGGIL Trigger: CAGGATCCCTCCCCGCGGCAGCGATGGCCCGAGCCATGAGAGTGAGGACTTTCCGCGCCCATTGGTGACCCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113485.9 ENSMUST00000131252.8 |
||
| 3UTR TCA 72 bp | GCTTTGCCGAACCATCCTGTCCACCAGGGGCGCTGCTaGGGCTGTCTGCCTGGAAGGGTCACCAATGGGCGC | + |
|
Preference number: 3 (lower is better) Translates to: ALPNHPVHQGRC*GCLPGRVTNGR Trigger: GCGCCCATTGGTGACCCTTCCAGGCAGACAGCCTCAGCAGCGCCCCTGGTGGACAGGATGGTTCGGCAAAGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113485.9 ENSMUST00000131252.8 |
||
| 3UTR CCA 72 bp | GCTGCATGGGATGCCCACCATGCCCACCTGTCAGGCTaGGTAATGGGTGTGGGAAGCTGTGGGGGCCACCTC | + |
|
Preference number: 3 (lower is better) Translates to: AAWDAHHAHLSG*VMGVGSCGGHL Trigger: GAGGTGGCCCCCACAGCTTCCCACACCCATTACCCAGCCTGACAGGTGGGCATGGTGGGCATCCCATGCAGC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113485.9 |
||
| 3UTR GCA 72 bp | ACCATCCTGTCCACCAGGGGCGCTGCTGAGGCTGTCTaGCTGGAAGGGTCACCAATGGGCGCGGAAAGTCCT | + |
|
Preference number: 3 (lower is better) Translates to: TILSTRGAAEAV*LEGSPMGAESP Trigger: AGGACTTTCCGCGCCCATTGGTGACCCTTCCAGGCAGACAGCCTCAGCAGCGCCCCTGGTGGACAGGATGGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113485.9 ENSMUST00000131252.8 |
||
| 3UTR CCA 72 bp | TCCTGTCCACCAGGGGCGCTGCTGAGGCTGTCTGCCTaGAAGGGTCACCAATGGGCGCGGAAAGTCCTCACT | + |
|
Preference number: 3 (lower is better) Translates to: SCPPGALLRLSA*KGHQWARKVLT Trigger: AGTGAGGACTTTCCGCGCCCATTGGTGACCCTTCCAGGCAGACAGCCTCAGCAGCGCCCCTGGTGGACAGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113485.9 ENSMUST00000131252.8 |
||
| 3UTR GCA 72 bp | GTGCCAGGAAAGCTCAAGCTGGCGCCCCACTACCACTaGCCGTTTCCCAAGCGAGTCCAGTCACTTGGCCCA | + |
|
Preference number: 3 (lower is better) Translates to: VPGKLKLAPHYH*PFPKRVQSLGP Trigger: TGGGCCAAGTGACTGGACTCGCTTGGGAAACGGGCAGTGGTAGTGGGGCGCCAGCTTGAGCTTTCCTGGCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113485.9 ENSMUST00000131252.8 |
||
| 3UTR CCA 72 bp | CACCATAGTGGGGTTGCCTTGCATCTGAGGGGTTCCTaGAGAAGCTGCGGCAGCCGCCTGCTGCTGTTGCCA | + |
|
Preference number: 3 (lower is better) Translates to: HHSGVALHLRGS*RSCGSRLLLLP Trigger: TGGCAACAGCAGCAGGCGGCTGCCGCAGCTTCTCCAGGAACCCCTCAGATGCAAGGCAACCCCACTATGGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113485.9 |
||
| 3UTR-3UTR CAA 90 bp | ATGGAGACAAGGGAAGGATCCTATCTGCAGCAGAAGACCGGGGAGAGCATCTCCAGCCGCCTGCTGCTGTaGCCATGGCGGGATGGACCC | + |
|
Preference number: 3 (lower is better) Translates to: METREGSYLQQKTGESISSRLLL*PWRDGP Trigger: GGGTCCATCCCGCCATGGCAACAGCAGCAGGCGGCT...GGAGATGCTCTCCCCGGTCTTCTGCTGCAGATAGGATCCTTCCCTTGTCTCCAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113485.9 |
||
| 3UTR GCA 72 bp | GGTGGTGGTGGTCCATTTGGGTTGTGCTGCATGGGATaGCCACCATGCCCACCTGTCAGGCTGGGTAATGGG | + |
|
Preference number: 3 (lower is better) Translates to: GGGGPFGLCCMG*PPCPPVRLGNG Trigger: CCCATTACCCAGCCTGACAGGTGGGCATGGTGGGCATCCCATGCAGCACAACCCAAATGGACCACCACCACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113485.9 |
||
| 3UTR GCA 72 bp | GGCTGCATCCAAGGTGGTGGTGGTCCATTTGGGTTGTaGTGCATGGGATGCCCACCATGCCCACCTGTCAGG | + |
|
Preference number: 3 (lower is better) Translates to: GCIQGGGGPFGL*CMGCPPCPPVR Trigger: CCTGACAGGTGGGCATGGTGGGCATCCCATGCAGCACAACCCAAATGGACCACCACCACCTTGGATGCAGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113485.9 |
||
| 3UTR CCA 72 bp | GACACTCGATGCTACAGGTGCCAGGAAAGCTCAAGCTaGCGCCCCACTACCACTGCCCGTTTCCCAAGCGAG | + |
|
Preference number: 3 (lower is better) Translates to: DTRCYRCQESSS*RPTTTARFPSE Trigger: CTCGCTTGGGAAACGGGCAGTGGTAGTGGGGCGCCAGCTTGAGCTTTCCTGGCACCTGTAGCATCGAGTGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113485.9 ENSMUST00000131252.8 |
||
| 3UTR GCA 72 bp | TGCATCCAAGGTGGTGGTGGTCCATTTGGGTTGTGCTaGATGGGATGCCCACCATGCCCACCTGTCAGGCTG | + |
|
Preference number: 3 (lower is better) Translates to: CIQGGGGPFGLC*MGCPPCPPVRL Trigger: CAGCCTGACAGGTGGGCATGGTGGGCATCCCATGCAGCACAACCCAAATGGACCACCACCACCTTGGATGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113485.9 |
||
| 3UTR CCA 72 bp | TCCAAGGTGGTGGTGGTCCATTTGGGTTGTGCTGCATaGGATGCCCACCATGCCCACCTGTCAGGCTGGGTA | + |
|
Preference number: 3 (lower is better) Translates to: SKVVVVHLGCAA*DAHHAHLSGWV Trigger: TACCCAGCCTGACAGGTGGGCATGGTGGGCATCCCATGCAGCACAACCCAAATGGACCACCACCACCTTGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113485.9 |
||
| 3UTR-3UTR CAA 90 bp | ATGGGATGCCCACCATGCCCACCTGTCAGGCTGGGTAATGGGTGTGGGAAGCTGCCAGCCCCTCCACACTaGGTACACACAGTAGTATTG | + |
|
Preference number: 3 (lower is better) Translates to: MGCPPCPPVRLGNGCGKLPAPPH*VHTVVL Trigger: CAATACTACTGTGTGTACCAAGTGTGGAGGGGCTGG...CAGCTTCCCACACCCATTACCCAGCCTGACAGGTGGGCATGGTGGGCATCCCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113485.9 |
||
| 3UTR TCA 72 bp | ACCACCTCCATGCATGCCATGGTAGGGCCGATTCTCTaGAGGACCAGAATTCATCCAGGGTGGGCGGCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: TTSMHAMVGPIL*RTRIHPGWAAL Trigger: CAGAGCCGCCCACCCTGGATGAATTCTGGTCCTTCAGAGAATCGGCCCTACCATGGCATGCATGGAGGTGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113485.9 |
||
| 3UTR GCA 72 bp | AAAAGACTCCAGGCTGGCCTATGGTGGCTTGGGCTGTaGCCTGTACTGCTGGCAGGAGTGCAGGAAGATGTG | + |
|
Preference number: 3 (lower is better) Translates to: KRLQAGLWWLGL*PVLLAGVQEDV Trigger: CACATCTTCCTGCACTCCTGCCAGCAGTACAGGGCACAGCCCAAGCCACCATAGGCCAGCCTGGAGTCTTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113485.9 ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000131252.8 |
||
| 3UTR GCA 72 bp | CCAAGCGAGTCCAGTCACTTGGCCCAGCCCAGTGCGTaGACACACACACATGCGTGCACACACAATCACATG | + |
|
Preference number: 3 (lower is better) Translates to: PSESSHLAQPSA*THTHACTHNHM Trigger: CATGTGATTGTGTGTGCACGCATGTGTGTGTGTGCACGCACTGGGCTGGGCCAAGTGACTGGACTCGCTTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113485.9 ENSMUST00000131252.8 |
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| 3UTR-3UTR CAA 90 bp | AGACACTCGATGCTACAGGTGCCAGGAAAGCTCAAGCTGGCGCCCCACTACCACATAACTCAGGCTGCTTaGCCGAACCATCCTGTCCAC | + |
|
Preference number: 3 (lower is better) Translates to: RHSMLQVPGKLKLAPHYHITQAA*PNHPVH Trigger: GTGGACAGGATGGTTCGGCAAAGCAGCCTGAGTTAT...GTGGTAGTGGGGCGCCAGCTTGAGCTTTCCTGGCACCTGTAGCATCGAGTGTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113485.9 ENSMUST00000131252.8 |
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| 3UTR-3UTR CAA 90 bp | ATGGGATGCCCACCATGCCCACCTGTCAGGCTGGGTAATGGGTGTGGGAAGCTGCCCCGAATCATGATCTaGGCGTTGCATTCCTTCTCA | + |
|
Preference number: 3 (lower is better) Translates to: MGCPPCPPVRLGNGCGKLPRIMI*ALHSFS Trigger: TGAGAAGGAATGCAACGCCAAGATCATGATTCGGGG...CAGCTTCCCACACCCATTACCCAGCCTGACAGGTGGGCATGGTGGGCATCCCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113485.9 |
||
| 3UTR GCA 72 bp | TTGGCCCAGCCCAGTGCGTGCACACACACACATGCGTaGACACACAATCACATGCGTGCATCCCAATGTCTG | + |
|
Preference number: 3 (lower is better) Translates to: LAQPSACTHTHA*THNHMRASQCL Trigger: CAGACATTGGGATGCACGCATGTGATTGTGTGTGCACGCATGTGTGTGTGTGCACGCACTGGGCTGGGCCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113485.9 ENSMUST00000131252.8 |
||
| 3UTR GCA 72 bp | TCACTTGGCCCAGCCCAGTGCGTGCACACACACACATaGGTGCACACACAATCACATGCGTGCATCCCAATG | + |
|
Preference number: 3 (lower is better) Translates to: SLGPAQCVHTHT*VHTQSHACIPM Trigger: CATTGGGATGCACGCATGTGATTGTGTGTGCACGCATGTGTGTGTGTGCACGCACTGGGCTGGGCCAAGTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113485.9 ENSMUST00000131252.8 |
||
| 3UTR CCA 72 bp | AGCTTGGGTGACCAGAGCATGAAAAAGACTCCAGGCTaGCCTATGGTGGCTTGGGCTGTGCCCTGTACTGCT | + |
|
Preference number: 3 (lower is better) Translates to: SLGDQSMKKTPG*PMVAWAVPCTA Trigger: AGCAGTACAGGGCACAGCCCAAGCCACCATAGGCCAGCCTGGAGTCTTTTTCATGCTCTGGTCACCCAAGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000113485.9 ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000131252.8 |
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| 3UTR-3UTR CAA 90 bp | GGAAGGGGCAAAGCAGCAGAACGAAGAACAAGGGACACAAGCCCCAGACACTGCATAACTCAGGCTGCTTaGCCGAACCATCCTGTCCAC | + |
|
Preference number: 3 (lower is better) Translates to: GRGKAAERRTRDTSPRHCITQAA*PNHPVH Trigger: GTGGACAGGATGGTTCGGCAAAGCAGCCTGAGTTAT...GCAGTGTCTGGGGCTTGTGTCCCTTGTTCTTCGTTCTGCTGCTTTGCCCCTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000113485.9 ENSMUST00000113487.8 ENSMUST00000131252.8 |
||
| 3UTR-3UTR CAA 90 bp | AATGGAGACAAGGGAAGGATCCTATCTGCAGCAGAAGACCGGGGAGAGCATCTCCATAGTGGGGTTGCCTaGCATCTGAGGGGTTCCTGG | + |
|
Preference number: 3 (lower is better) Translates to: NGDKGRILSAAEDRGEHLHSGVA*HLRGSW Trigger: CCAGGAACCCCTCAGATGCAAGGCAACCCCACTATG...GAGATGCTCTCCCCGGTCTTCTGCTGCAGATAGGATCCTTCCCTTGTCTCCATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000113485.9 |
||
| 3UTR TCA 72 bp | CAAATGGGTTCTGAGGCAGCTTGGGTGACCAGAGCATaGAAAAGACTCCAGGCTGGCCTATGGTGGCTTGGG | + |
|
Preference number: 3 (lower is better) Translates to: QMGSEAAWVTRA*KRLQAGLWWLG Trigger: CCCAAGCCACCATAGGCCAGCCTGGAGTCTTTTTCATGCTCTGGTCACCCAAGCTGCCTCAGAACCCATTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113485.9 ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000131252.8 |
||
| 3UTR TCA 72 bp | TCTGAAGGACCAGAATTCATCCAGGGTGGGCGGCTCTaGGTTGTAGACATGAGAGACGGTGGTGGTGGGTTG | + |
|
Preference number: 3 (lower is better) Translates to: SEGPEFIQGGRL*VVDMRDGGGGL Trigger: CAACCCACCACCACCGTCTCTCATGTCTACAACTCAGAGCCGCCCACCCTGGATGAATTCTGGTCCTTCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113485.9 |
||
| 3UTR GCA 72 bp | GTGTGTTCCGATTCCGTCCACAAAAATAACTCAGGCTaGTTTGCCGAACCATCCTGTCCACCAGGGGCGCTG | + |
|
Preference number: 3 (lower is better) Translates to: VCSDSVHKNNSG*FAEPSCPPGAL Trigger: CAGCGCCCCTGGTGGACAGGATGGTTCGGCAAAGCAGCCTGAGTTATTTTTGTGGACGGAATCGGAACACAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000113485.9 ENSMUST00000113487.8 ENSMUST00000124667.2 ENSMUST00000131252.8 |
||
| 3UTR-3UTR CAA 90 bp | AGGAAGGGGCAAAGCAGCAGAACGAAGAACAAGGGACACAAGCCCCAGACACTGATAACTCAGGCTGCTTaGCCGAACCATCCTGTCCAC | + |
|
Preference number: 3 (lower is better) Translates to: RKGQSSRTKNKGHKPQTLITQAA*PNHPVH Trigger: GTGGACAGGATGGTTCGGCAAAGCAGCCTGAGTTAT...CAGTGTCTGGGGCTTGTGTCCCTTGTTCTTCGTTCTGCTGCTTTGCCCCTTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000113485.9 ENSMUST00000113487.8 ENSMUST00000131252.8 |
||
| 3UTR GCA 72 bp | CGTAGAGTGCCATTCAAGCGAGCCAACTCTCGAAGCTaGATTTTCCGTAGATCGTTCTGGTCCTCTGGGGTC | + |
|
Preference number: 3 (lower is better) Translates to: RRVPFKRANSRS*IFRRSFWSSGV Trigger: GACCCCAGAGGACCAGAACGATCTACGGAAAATGCAGCTTCGAGAGTTGGCTCGCTTGAATGGCACTCTACG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113485.9 |
||
| 3UTR GCA 72 bp | CGTGCACACACACACATGCGTGCACACACAATCACATaGGTGCATCCCAATGTCTGGCTCCATATGGTGAGG | + |
|
Preference number: 3 (lower is better) Translates to: RAHTHMRAHTIT*VHPNVWLHMVR Trigger: CCTCACCATATGGAGCCAGACATTGGGATGCACGCATGTGATTGTGTGTGCACGCATGTGTGTGTGTGCACG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113485.9 ENSMUST00000131252.8 |
||
| 3UTR GCA 72 bp | AGGAGAGAAGACAAAGAAGACACTCGATGCTACAGGTaGCAGGAAAGCTCAAGCTGGCGCCCCACTACCACT | + |
|
Preference number: 3 (lower is better) Translates to: RREDKEDTRCYR*QESSSWRPTTT Trigger: AGTGGTAGTGGGGCGCCAGCTTGAGCTTTCCTGGCACCTGTAGCATCGAGTGTCTTCTTTGTCTTCTCTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113485.9 ENSMUST00000131252.8 |
||
| 3UTR GCA 72 bp | AGGGCTTGGTTAGGAAGCCTAAGGGTAGACAGCAACTaGCCTCAAGCCTCTAGACAAAGCAGCAGCAGCTGT | + |
|
Preference number: 3 (lower is better) Translates to: RAWLGSLRVDSN*PQASRQSSSSC Trigger: ACAGCTGCTGCTGCTTTGTCTAGAGGCTTGAGGGCAGTTGCTGTCTACCCTTAGGCTTCCTAACCAAGCCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131252.8 |
||
| 3UTR GCA 72 bp | GAGGTAAAGCCAAGGTCGAAGAGGGTGGCCAGGCCCTaGCCCCACACTGTAAGGTTAAAGACAATAGGGAAA | + |
|
Preference number: 3 (lower is better) Translates to: EVKPRSKRVARP*PHTVRLKTIGK Trigger: TTTCCCTATTGTCTTTAACCTTACAGTGTGGGGGCAGGGCCTGGCCACCCTCTTCGACCTTGGCTTTACCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131252.8 |
||
| 3UTR TCA 72 bp | GCCCTCAAGCCTCTAGACAAAGCAGCAGCAGCTGTATaGGCTGCCAAAGACGTGGCTCTCACAAAGACACAA | + |
|
Preference number: 3 (lower is better) Translates to: ALKPLDKAAAAV*AAKDVALTKTQ Trigger: TTGTGTCTTTGTGAGAGCCACGTCTTTGGCAGCTCATACAGCTGCTGCTGCTTTGTCTAGAGGCTTGAGGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131252.8 |
||
| 3UTR CCA 72 bp | GCCAACTCTCGAAGCTGCATTTTCCGTAGATCGTTCTaGTCCTCTGGGGTCTCAATACCCTGCTTCAGGATG | + |
|
Preference number: 3 (lower is better) Translates to: ANSRSCIFRRSF*SSGVSIPCFRM Trigger: CATCCTGAAGCAGGGTATTGAGACCCCAGAGGACCAGAACGATCTACGGAAAATGCAGCTTCGAGAGTTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113485.9 |
||
| 3UTR-3UTR CAA 90 bp | GGCTGTCTGCCTGGAAGGGTCACCAATGGGCGCGGAAAGTCCTCACTCTCATGGTGTTCTACTGCCTTTTaGACATTCTCCATCGTATTG | + |
|
Preference number: 3 (lower is better) Translates to: GCLPGRVTNGRGKSSLSWCSTAF*TFSIVL Trigger: CAATACGATGGAGAATGTCAAAAAGGCAGTAGAACA...CCATGAGAGTGAGGACTTTCCGCGCCCATTGGTGACCCTTCCAGGCAGACAGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113485.9 |
||
| 3UTR CCA 72 bp | AAACCATTTGCCCCTCTCCCTTTGGGAGGAGAGGAATaGAGACAAGGGAAGGATCCTATCTGCAGCAGAAGA | + |
|
Preference number: 3 (lower is better) Translates to: KPFAPLPLGGEE*RQGKDPICSRR Trigger: TCTTCTGCTGCAGATAGGATCCTTCCCTTGTCTCCATTCCTCTCCTCCCAAAGGGAGAGGGGCAAATGGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000113485.9 ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000125516.8 ENSMUST00000131252.8 |
||
| 3UTR TCA 72 bp | TCACATGCGTGCATCCCAATGTCTGGCTCCATATGGTaGGGTTCGGCGTGTGTTTATAAGAGACCAACTCTC | + |
|
Preference number: 3 (lower is better) Translates to: SHACIPMSGSIW*GSACVYKRPTL Trigger: GAGAGTTGGTCTCTTATAAACACACGCCGAACCTCACCATATGGAGCCAGACATTGGGATGCACGCATGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113485.9 ENSMUST00000131252.8 |
||
| 3UTR GCA 72 bp | ACAGTAGTATTGGTAATGCTGCGCGTCTCTGAGCTCTaGCAGGGCCTTAAGATCCTATTATCATCTTCCCGT | + |
|
Preference number: 3 (lower is better) Translates to: TVVLVMLRVSEL*QGLKILLSSSR Trigger: ACGGGAAGATGATAATAGGATCTTAAGGCCCTGGCAGAGCTCAGAGACGCGCAGCATTACCAATACTACTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113485.9 |
||
| 3UTR GCA 72 bp | ACTGCTGGCAGGAGTGCAGGAAGATGTGAATCCCACTaGCAAATAAACCCTATTGAGCAACGAGTCAGATTT | + |
|
Preference number: 3 (lower is better) Translates to: TAGRSAGRCESH*QINPIEQRVRF Trigger: AAATCTGACTCGTTGCTCAATAGGGTTTATTTGGCAGTGGGATTCACATCTTCCTGCACTCCTGCCAGCAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000113485.9 ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000131252.8 |
||
| 3UTR GCA 72 bp | AGGGCCTTAAGATCCTATTATCATCTTCCCGTAGAGTaGCATTCAAGCGAGCCAACTCTCGAAGCTGCATTT | + |
|
Preference number: 3 (lower is better) Translates to: RALRSYYHLPVE*HSSEPTLEAAF Trigger: AAATGCAGCTTCGAGAGTTGGCTCGCTTGAATGGCACTCTACGGGAAGATGATAATAGGATCTTAAGGCCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113485.9 |
||
| 3UTR-3UTR CAA 90 bp | ATGAAGAGGCTCATCTTCGCCTGGCAACATCTGACCATCTTTACGCCCAACTTTAGGAGCCCCACAAAATaGATTTCTGGATATTCGTCT | + |
|
Preference number: 3 (lower is better) Translates to: MKRLIFAWQHLTIFTPNFRSPTK*ISGYSS Trigger: AGACGAATATCCAGAAATCAATTTTGTGGGGCTCCT...AAAGTTGGGCGTAAAGATGGTCAGATGTTGCCAGGCGAAGATGAGCCTCTTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000113485.9 ENSMUST00000144409.8 |
||
| 3UTR GCA 72 bp | ATTGATTTTACTTCTAAAACCCACACAGCGCCACTTTaGCGCTTCCAGAGCTTCAAAGAGCTAATTAACCGC | + |
|
Preference number: 3 (lower is better) Translates to: IDFTSKTHTAPL*RFQSFKELINR Trigger: GCGGTTAATTAGCTCTTTGAAGCTCTGGAAGCGGCAAAGTGGCGCTGTGTGGGTTTTAGAAGTAAAATCAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131252.8 |
||
| CDS-3UTR GCA 90 bp | TCAGGCTGCTTTGCCGAACCATCCTGTCCACCAGGGGCGCTGCTGAGGCTGTCTGGAGGAGGGCCATGGTaGCCAGGTGGGTGGGGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: SGCFAEPSCPPGALLRLSGGGPW*PGGWGP Trigger: GGGCCCCCACCCACCTGGGCACCATGGCCCTCCTCC...AGACAGCCTCAGCAGCGCCCCTGGTGGACAGGATGGTTCGGCAAAGCAGCCTGA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000113487.8 ENSMUST00000124667.2 ENSMUST00000131252.8 |
||
| 3UTR CAA 72 bp | GGTTCCTGGAGAAGCTGCGGCAGCCGCCTGCTGCTGTaGCCATGGCGGGATGGACCCTGTGCCAGCGCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: GSWRSCGSRLLL*PWRDGPCASAR Trigger: ACGAGCGCTGGCACAGGGTCCATCCCGCCATGGCAACAGCAGCAGGCGGCTGCCGCAGCTTCTCCAGGAACC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113485.9 |
||
| CDS-3UTR CCA 90 bp | GGCTGCTTTGCCGAACCATCCTGTCCACCAGGGGCGCTGCTGAGGCTGTCTGCCAAGAGCAGGGACCATTaGAGGAGGGCCATGGTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: GCFAEPSCPPGALLRLSAKSRDH*RRAMVP Trigger: GGGCACCATGGCCCTCCTCCAATGGTCCCTGCTCTT...GGCAGACAGCCTCAGCAGCGCCCCTGGTGGACAGGATGGTTCGGCAAAGCAGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124667.2 |
||
| CDS-3UTR GCA 90 bp | GGCTGTCTGCCTGGAAGGGTCACCAATGGGCGCGGAAAGTCCTCACTCTCATGGTGGAAGCCATACTGCTaGTGGGCGGAGGGGGTGGCG | + |
|
Preference number: 4 (lower is better) Translates to: GCLPGRVTNGRGKSSLSWWKPYC*WAEGVA Trigger: CGCCACCCCCTCCGCCCAGCAGCAGTATGGCTTCCA...CCATGAGAGTGAGGACTTTCCGCGCCCATTGGTGACCCTTCCAGGCAGACAGCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131252.8 |
||
| CDS-3UTR GCA 90 bp | TCAGGCTGCTTTGCCGAACCATCCTGTCCACCAGGGGCGCTGCTGAGGCTGTCTTGCTGGAAGCCATACTaGTGCTGGGCGGAGGGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SGCFAEPSCPPGALLRLSCWKPY*CWAEGV Trigger: CACCCCCTCCGCCCAGCAGCAGTATGGCTTCCAGCA...AGACAGCCTCAGCAGCGCCCCTGGTGGACAGGATGGTTCGGCAAAGCAGCCTGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000113487.8 ENSMUST00000124667.2 ENSMUST00000131252.8 |
||
| CDS-3UTR CCA 90 bp | GGGAAGGATCCTATCTGCAGCAGAAGACCGGGGAGAGCATCTCCTTGGACGGAGGGAAGTCCAGCGGCGTaGCGTTCGCTCCGGTCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: GKDPICSRRPGRASPWTEGSPAA*RSLRSP Trigger: TGGCGACCGGAGCGAACGCCACGCCGCTGGACTTCC...CTCCGTCCAAGGAGATGCTCTCCCCGGTCTTCTGCTGCAGATAGGATCCTTCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113485.9 ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000131252.8 |
||
| CDS-3UTR CCA 90 bp | GGCTGCTTTGCCGAACCATCCTGTCCACCAGGGGCGCTGCTGAGGCTGTCTGCCTTGGGTTGTGCTGCATaGGATGCCCACCATGCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: GCFAEPSCPPGALLRLSALGCAA*DAHHAH Trigger: GTGGGCATGGTGGGCATCCCATGCAGCACAACCCAA...GGCAGACAGCCTCAGCAGCGCCCCTGGTGGACAGGATGGTTCGGCAAAGCAGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000113487.8 ENSMUST00000124667.2 ENSMUST00000131252.8 |
||
| CDS-3UTR CCA 90 bp | GGCTGCTTTGCCGAACCATCCTGTCCACCAGGGGCGCTGCTGAGGCTGTCTGCCATGGCAAGGGGGTGCTaGAAGCCATACTGCTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GCFAEPSCPPGALLRLSAMARGC*KPYCCW Trigger: CCAGCAGCAGTATGGCTTCCAGCACCCCCTTGCCAT...GGCAGACAGCCTCAGCAGCGCCCCTGGTGGACAGGATGGTTCGGCAAAGCAGCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000113487.8 ENSMUST00000124667.2 ENSMUST00000131252.8 |
||
| CDS-3UTR TCA 90 bp | GGAAGGATCCTATCTGCAGCAGAAGACCGGGGAGAGCATCTCCTTGGACGGAGTCACCAGGGGCGCTGCTaGGGCTGTCTGCCTGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: GRILSAAEDRGEHLLGRSHQGRC*GCLPGR Trigger: CCTTCCAGGCAGACAGCCTCAGCAGCGCCCCTGGTG...ACTCCGTCCAAGGAGATGCTCTCCCCGGTCTTCTGCTGCAGATAGGATCCTTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000113489.8 ENSMUST00000125516.8 |
||
| CDS-3UTR GCA 90 bp | AAGGAAGGGGCAAAGCAGCAGAACGAAGAACAAGGGACACAAGCCCCAGACACTGGAGGAGGGCCATGGTaGCCAGGTGGGTGGGGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: KEGAKQQNEEQGTQAPDTGGGPW*PGGWGP Trigger: GGGCCCCCACCCACCTGGGCACCATGGCCCTCCTCC...AGTGTCTGGGGCTTGTGTCCCTTGTTCTTCGTTCTGCTGCTTTGCCCCTTCCTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000131252.8 |
||
| CDS-3UTR GCA 90 bp | CACACACACACATGCGTGCACACACAATCACATGCGTGCATCCCAATGTCTGGCGGAGGAGGGCCATGGTaGCCAGGTGGGTGGGGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: HTHTCVHTQSHACIPMSGGGGPW*PGGWGP Trigger: GGGCCCCCACCCACCTGGGCACCATGGCCCTCCTCC...GCCAGACATTGGGATGCACGCATGTGATTGTGTGTGCACGCATGTGTGTGTGTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131252.8 |
||
| CDS-3UTR GCA 90 bp | TGCCAGGAAAGCTCAAGCTGGCGCCCCACTACCACTGCCCGTTTCCCAAGCGAGGGAGGCTGCTGCTGCTaGTGCTGCCATGGAGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: CQESSSWRPTTTARFPSEGGCCC*CCHGGR Trigger: TCTTCCTCCATGGCAGCAGCAGCAGCAGCAGCCTCC...CTCGCTTGGGAAACGGGCAGTGGTAGTGGGGCGCCAGCTTGAGCTTTCCTGGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131252.8 |
||
| CDS-3UTR GCA 90 bp | GGAAGGATCCTATCTGCAGCAGAAGACCGGGGAGAGCATCTCCTTGGACGGAGTGGCTCGGGCCATCGCTaGCGCGGGGAGGGATCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: GRILSAAEDRGEHLLGRSGSGHR*RGEGSL Trigger: CAAAGATCCCTCCCCGCGGCAGCGATGGCCCGAGCC...ACTCCGTCCAAGGAGATGCTCTCCCCGGTCTTCTGCTGCAGATAGGATCCTTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000125516.8 |
||
| CDS-3UTR GCA 90 bp | GAGGAGAGGAATGGAGACAAGGGAAGGATCCTATCTGCAGCAGAAGACCGGGGATCCCGAAGGGCGGCATaGCCGCCACCCCCATGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: EERNGDKGRILSAAEDRGSRRAA*PPPPCP Trigger: TGGGCATGGGGGTGGCGGGCATGCCGCCCTTCGGGA...TCCCCGGTCTTCTGCTGCAGATAGGATCCTTCCCTTGTCTCCATTCCTCTCCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000131252.8 |
||
| CDS-3UTR CCA 90 bp | GAGCATGAAAAAGACTCCAGGCTGGCCTATGGTGGCTTGGGCTGTGCCCTGTACGGAAGTCCAGCGGCGTaGCGTTCGCTCCGGTCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: EHEKDSRLAYGGLGCALYGSPAA*RSLRSP Trigger: TGGCGACCGGAGCGAACGCCACGCCGCTGGACTTCC...GTACAGGGCACAGCCCAAGCCACCATAGGCCAGCCTGGAGTCTTTTTCATGCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000113485.9 ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000131252.8 |
||
| CDS-3UTR CCA 90 bp | TCAGGCTGCTTTGCCGAACCATCCTGTCCACCAGGGGCGCTGCTGAGGCTGTCTGCCCACCTGTCAGGCTaGGTAATGGGTGTGGGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: SGCFAEPSCPPGALLRLSAHLSG*VMGVGS Trigger: GCTTCCCACACCCATTACCCAGCCTGACAGGTGGGC...AGACAGCCTCAGCAGCGCCCCTGGTGGACAGGATGGTTCGGCAAAGCAGCCTGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000113487.8 ENSMUST00000124667.2 ENSMUST00000131252.8 |
||
| CDS-3UTR GCA 90 bp | GCAGAAGACCGGGGAGAGCATCTCCTTGGACGGAGTCTGAAGAAAGGAAAAGATGGAGGAGGGCCATGGTaGCCAGGTGGGTGGGGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: AEDRGEHLLGRSLKKGKDGGGPW*PGGWGP Trigger: GGGCCCCCACCCACCTGGGCACCATGGCCCTCCTCC...ATCTTTTCCTTTCTTCAGACTCCGTCCAAGGAGATGCTCTCCCCGGTCTTCTGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000125516.8 ENSMUST00000131252.8 |
||
| CDS-3UTR GCA 90 bp | AGGATCCTATCTGCAGCAGAAGACCGGGGAGAGCATCTCCTTGGACGGAGTCTGTGGAAGCCATACTGCTaGTGGGCGGAGGGGGTGGCG | + |
|
Preference number: 4 (lower is better) Translates to: RILSAAEDRGEHLLGRSLWKPYC*WAEGVA Trigger: CGCCACCCCCTCCGCCCAGCAGCAGTATGGCTTCCA...CAGACTCCGTCCAAGGAGATGCTCTCCCCGGTCTTCTGCTGCAGATAGGATCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000125516.8 ENSMUST00000131252.8 |
||
| CDS-3UTR GCA 90 bp | ACAAGGGAAGGATCCTATCTGCAGCAGAAGACCGGGGAGAGCATCTCCTTGGACGGCTCGGGCCATCGCTaGCGCGGGGAGGGATCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: TREGSYLQQKTGESISLDGSGHR*RGEGSL Trigger: CAAAGATCCCTCCCCGCGGCAGCGATGGCCCGAGCC...GTCCAAGGAGATGCTCTCCCCGGTCTTCTGCTGCAGATAGGATCCTTCCCTTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000125516.8 |
||
| CDS-3UTR GCA 90 bp | ACAAGGGAAGGATCCTATCTGCAGCAGAAGACCGGGGAGAGCATCTCCTTGGACGCGGCAGCCGCCTGCTaGTGTTGCCATGGCGGGATG | + |
|
Preference number: 4 (lower is better) Translates to: TREGSYLQQKTGESISLDAAAAC*CCHGGM Trigger: CATCCCGCCATGGCAACAGCAGCAGGCGGCTGCCGC...GTCCAAGGAGATGCTCTCCCCGGTCTTCTGCTGCAGATAGGATCCTTCCCTTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131252.8 |
||
| CDS-3UTR CCA 90 bp | ATGGAGACAAGGGAAGGATCCTATCTGCAGCAGAAGACCGGGGAGAGCATCTCCGGAAGTCCAGCGGCGTaGCGTTCGCTCCGGTCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: METREGSYLQQKTGESISGSPAA*RSLRSP Trigger: TGGCGACCGGAGCGAACGCCACGCCGCTGGACTTCC...GGAGATGCTCTCCCCGGTCTTCTGCTGCAGATAGGATCCTTCCCTTGTCTCCAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113485.9 ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000131252.8 |
||
| CDS-3UTR CCA 90 bp | AGGATCCTATCTGCAGCAGAAGACCGGGGAGAGCATCTCCTTGGACGGAGTCTGGGTGGGTGGGGGCCCTaGTTCATCGGTGGTGGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: RILSAAEDRGEHLLGRSLGGWGP*FIGGGG Trigger: ACCACCACCACCGATGAACCAGGGCCCCCACCCACC...CAGACTCCGTCCAAGGAGATGCTCTCCCCGGTCTTCTGCTGCAGATAGGATCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000125516.8 ENSMUST00000131252.8 |
||
| CDS-3UTR CCA 90 bp | GGAAGGAAGGGGCAAAGCAGCAGAACGAAGAACAAGGGACACAAGCCCCAGACACTGCCCACTGGGAGGTaGCGGAGGCGGCGGCATCAT | + |
|
Preference number: 4 (lower is better) Translates to: GRKGQSSRTKNKGHKPQTLPTGR*RRRRHH Trigger: ATGATGCCGCCGCCTCCGCCACCTCCCAGTGGGCAG...TGTCTGGGGCTTGTGTCCCTTGTTCTTCGTTCTGCTGCTTTGCCCCTTCCTTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000131252.8 |
||
| CDS-3UTR CCA 90 bp | ATGGAGACAAGGGAAGGATCCTATCTGCAGCAGAAGACCGGGGAGAGCATCTCCCTGCCCACTGGGAGGTaGCGGAGGCGGCGGCATCAT | + |
|
Preference number: 4 (lower is better) Translates to: METREGSYLQQKTGESISLPTGR*RRRRHH Trigger: ATGATGCCGCCGCCTCCGCCACCTCCCAGTGGGCAG...GGAGATGCTCTCCCCGGTCTTCTGCTGCAGATAGGATCCTTCCCTTGTCTCCAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000131252.8 |
||
| CDS-3UTR CCA 90 bp | GGAAGGGGCAAAGCAGCAGAACGAAGAACAAGGGACACAAGCCCCAGACACTGCAAGCCATACTGCTGCTaGGCGGAGGGGGTGGCGGAG | + |
|
Preference number: 4 (lower is better) Translates to: GRGKAAERRTRDTSPRHCKPYCC*AEGVAE Trigger: CTCCGCCACCCCCTCCGCCCAGCAGCAGTATGGCTT...GCAGTGTCTGGGGCTTGTGTCCCTTGTTCTTCGTTCTGCTGCTTTGCCCCTTCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000131252.8 |
||
| CDS-3UTR CCA 90 bp | TGGCTTGGGCTGTGCCCTGTACTGCTGGCAGGAGTGCAGGAAGATGTGAATCCCCTGCTGCTGTTGCCATaGCGGGATGGACCCTGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: WLGLCPVLLAGVQEDVNPLLLLP*RDGPCA Trigger: GGCACAGGGTCCATCCCGCCATGGCAACAGCAGCAG...GGGATTCACATCTTCCTGCACTCCTGCCAGCAGTACAGGGCACAGCCCAAGCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131252.8 |
||
| CDS-3UTR GCA 90 bp | TCAGGCTGCTTTGCCGAACCATCCTGTCCACCAGGGGCGCTGCTGAGGCTGTCTTGCCCAGGTCTCCTGTaGGCAGTTTACGAGTCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: SGCFAEPSCPPGALLRLSCPGLL*AVYESG Trigger: ACCTGACTCGTAAACTGCGCACAGGAGACCTGGGCA...AGACAGCCTCAGCAGCGCCCCTGGTGGACAGGATGGTTCGGCAAAGCAGCCTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113487.8 ENSMUST00000131252.8 |
||
| CDS-3UTR GCA 90 bp | ATCTGCAGCAGAAGACCGGGGAGAGCATCTCCTTGGACGGAGTCTGAAGAAAGGTGGAAGCCATACTGCTaGTGGGCGGAGGGGGTGGCG | + |
|
Preference number: 4 (lower is better) Translates to: ICSRRPGRASPWTESEERWKPYC*WAEGVA Trigger: CGCCACCCCCTCCGCCCAGCAGCAGTATGGCTTCCA...CCTTTCTTCAGACTCCGTCCAAGGAGATGCTCTCCCCGGTCTTCTGCTGCAGAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000125516.8 ENSMUST00000131252.8 |
||
| CDS-3UTR GCA 90 bp | GGAAGGATCCTATCTGCAGCAGAAGACCGGGGAGAGCATCTCCTTGGACGGAGTTGCTGGAAGCCATACTaGTGCTGGGCGGAGGGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: GRILSAAEDRGEHLLGRSCWKPY*CWAEGV Trigger: CACCCCCTCCGCCCAGCAGCAGTATGGCTTCCAGCA...ACTCCGTCCAAGGAGATGCTCTCCCCGGTCTTCTGCTGCAGATAGGATCCTTCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000125516.8 ENSMUST00000131252.8 |
||
| CDS-3UTR CCA 90 bp | AGACACTCGATGCTACAGGTGCCAGGAAAGCTCAAGCTGGCGCCCCACTACCACCATGAGAGACGGTGGTaGTGGGTTGCTGGCAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: RHSMLQVPGKLKLAPHYHHERRW*WVAGRS Trigger: GCTCCTGCCAGCAACCCACCACCACCGTCTCTCATG...GTGGTAGTGGGGCGCCAGCTTGAGCTTTCCTGGCACCTGTAGCATCGAGTGTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131252.8 |
||
| CDS-3UTR CCA 90 bp | ACAAGGGAAGGATCCTATCTGCAGCAGAAGACCGGGGAGAGCATCTCCTTGGACGGTGGGTGGGGGCCCTaGTTCATCGGTGGTGGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: TREGSYLQQKTGESISLDGGWGP*FIGGGG Trigger: ACCACCACCACCGATGAACCAGGGCCCCCACCCACC...GTCCAAGGAGATGCTCTCCCCGGTCTTCTGCTGCAGATAGGATCCTTCCCTTGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000125516.8 ENSMUST00000131252.8 |
||
| CDS-3UTR CCA 90 bp | ACAAGGGAAGGATCCTATCTGCAGCAGAAGACCGGGGAGAGCATCTCCTTGGACAAGCCATACTGCTGCTaGGCGGAGGGGGTGGCGGAG | + |
|
Preference number: 4 (lower is better) Translates to: TREGSYLQQKTGESISLDKPYCC*AEGVAE Trigger: CTCCGCCACCCCCTCCGCCCAGCAGCAGTATGGCTT...GTCCAAGGAGATGCTCTCCCCGGTCTTCTGCTGCAGATAGGATCCTTCCCTTGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000125516.8 ENSMUST00000131252.8 |
||
| 3UTR CAA 72 bp | GAGCATGAAAAAGACTCCAGGCTGGCCTATGGTGGCTaGGGCTGTGCCCTGTACTGCTGGCAGGAGTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: EHEKDSRLAYGG*GCALYCWQECR Trigger: CCTGCACTCCTGCCAGCAGTACAGGGCACAGCCCAAGCCACCATAGGCCAGCCTGGAGTCTTTTTCATGCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000113485.9 ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000131252.8 |
||
| CDS-3UTR TCA 90 bp | GGGAAGGATCCTATCTGCAGCAGAAGACCGGGGAGAGCATCTCCTTGGACGGAGCAGGGTGGGCGGCTCTaGGTTGTAGACATGAGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: GKDPICSRRPGRASPWTEQGGRL*VVDMRD Trigger: GTCTCTCATGTCTACAACTCAGAGCCGCCCACCCTG...CTCCGTCCAAGGAGATGCTCTCCCCGGTCTTCTGCTGCAGATAGGATCCTTCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000125516.8 ENSMUST00000131252.8 |
||
| CDS-3UTR GCA 90 bp | GGAAGGGGCAAAGCAGCAGAACGAAGAACAAGGGACACAAGCCCCAGACACTGCGGTAGAGCCCACAGATaGAGGGACAGGAGCTTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: GRGKAAERRTRDTSPRHCGRAHR*RDRSFP Trigger: GGGGAAGCTCCTGTCCCTGCATCTGTGGGCTCTACC...GCAGTGTCTGGGGCTTGTGTCCCTTGTTCTTCGTTCTGCTGCTTTGCCCCTTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000131252.8 |
||
| CDS-3UTR GCA 90 bp | GGGAAGGAAGGGGCAAAGCAGCAGAACGAAGAACAAGGGACACAAGCCCCAGACGGAGGCTGCTGCTGCTaGTGCTGCCATGGAGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: GKEGAKQQNEEQGTQAPDGGCCC*CCHGGR Trigger: TCTTCCTCCATGGCAGCAGCAGCAGCAGCAGCCTCC...GTCTGGGGCTTGTGTCCCTTGTTCTTCGTTCTGCTGCTTTGCCCCTTCCTTCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000131252.8 |
||
| CDS-3UTR GCA 90 bp | GGAAGGAAGGGGCAAAGCAGCAGAACGAAGAACAAGGGACACAAGCCCCAGACATGCTGGAAGCCATACTaGTGCTGGGCGGAGGGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: GRKGQSSRTKNKGHKPQTCWKPY*CWAEGV Trigger: CACCCCCTCCGCCCAGCAGCAGTATGGCTTCCAGCA...TGTCTGGGGCTTGTGTCCCTTGTTCTTCGTTCTGCTGCTTTGCCCCTTCCTTCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000131252.8 |
||
| CDS-3UTR GCA 90 bp | GAGGAATGGAGACAAGGGAAGGATCCTATCTGCAGCAGAAGACCGGGGAGAGCATGCTGGAAGCCATACTaGTGCTGGGCGGAGGGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: EEWRQGKDPICSRRPGRACWKPY*CWAEGV Trigger: CACCCCCTCCGCCCAGCAGCAGTATGGCTTCCAGCA...TGCTCTCCCCGGTCTTCTGCTGCAGATAGGATCCTTCCCTTGTCTCCATTCCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000125516.8 ENSMUST00000131252.8 |
||
| CDS-3UTR GCA 90 bp | GGAAGGGGCAAAGCAGCAGAACGAAGAACAAGGGACACAAGCCCCAGACACTGCGCCATGGCAAGGGGGTaGTGGAAGCCATACTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: GRGKAAERRTRDTSPRHCAMARG*WKPYCC Trigger: GCAGCAGTATGGCTTCCAGCACCCCCTTGCCATGGC...GCAGTGTCTGGGGCTTGTGTCCCTTGTTCTTCGTTCTGCTGCTTTGCCCCTTCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000131252.8 |
||
| CDS-3UTR GCA 90 bp | GGAAGGGGCAAAGCAGCAGAACGAAGAACAAGGGACACAAGCCCCAGACACTGCGGGAGGGATCTTTGCTaGCATGGCAAGGGGGTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: GRGKAAERRTRDTSPRHCGRDLC*HGKGVL Trigger: CAGCACCCCCTTGCCATGGCAGCAAAGATCCCTCCC...GCAGTGTCTGGGGCTTGTGTCCCTTGTTCTTCGTTCTGCTGCTTTGCCCCTTCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 |
||
| CDS-3UTR GCA 90 bp | AGCAGAAGACCGGGGAGAGCATCTCCTTGGACGGAGTCTGAAGAAAGGAAAAGAGGCTCGGGCCATCGCTaGCGCGGGGAGGGATCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: SRRPGRASPWTESEERKRGSGHR*RGEGSL Trigger: CAAAGATCCCTCCCCGCGGCAGCGATGGCCCGAGCC...TCTTTTCCTTTCTTCAGACTCCGTCCAAGGAGATGCTCTCCCCGGTCTTCTGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000125516.8 |
||
| CDS-3UTR GCA 90 bp | CCAGTGTGTTCCGATTCCGTCCACAAAAATAACTCAGGCTGCTTTGCCGAACCAGCTGCGGCAGCCGCCTaGTGCTGTTGCCATGGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: PVCSDSVHKNNSGCFAEPAAAAA*CCCHGG Trigger: CCCGCCATGGCAACAGCAGCAGGCGGCTGCCGCAGC...TGGTTCGGCAAAGCAGCCTGAGTTATTTTTGTGGACGGAATCGGAACACACTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131252.8 |
||
| CDS-3UTR GCA 90 bp | TGCAGCAGAAGACCGGGGAGAGCATCTCCTTGGACGGAGTCTGAAGAAAGGAAAGGTTCCTGGAGAAGCTaGGGCAGCCGCCTGCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: CSRRPGRASPWTESEERKGSWRS*GSRLLL Trigger: CAGCAGCAGGCGGCTGCCGCAGCTTCTCCAGGAACC...TTTCCTTTCTTCAGACTCCGTCCAAGGAGATGCTCTCCCCGGTCTTCTGCTGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131252.8 |
||
| CDS-3UTR CCA 90 bp | AGGATCCTATCTGCAGCAGAAGACCGGGGAGAGCATCTCCTTGGACGGAGTCTGAGGAGCAGCAGGTCTTaGTGCACTAGCCAGGGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: RILSAAEDRGEHLLGRSLRSSRS*CTSQGR Trigger: ACGCCCCTGGCTAGTGCACCAAGACCTGCTGCTCCT...CAGACTCCGTCCAAGGAGATGCTCTCCCCGGTCTTCTGCTGCAGATAGGATCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000125516.8 ENSMUST00000131252.8 |
||
| CDS-3UTR CCA 90 bp | ACAAGGGAAGGATCCTATCTGCAGCAGAAGACCGGGGAGAGCATCTCCTTGGACGAGAGACGGTGGTGGTaGGTTGCTGGCAGGAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: TREGSYLQQKTGESISLDERRWW*VAGRSS Trigger: GCTGCTCCTGCCAGCAACCCACCACCACCGTCTCTC...GTCCAAGGAGATGCTCTCCCCGGTCTTCTGCTGCAGATAGGATCCTTCCCTTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000125516.8 ENSMUST00000131252.8 |
||
| CDS-3UTR CCA 90 bp | AGGGAAGGATCCTATCTGCAGCAGAAGACCGGGGAGAGCATCTCCTTGGACGGACATGAGAGACGGTGGTaGTGGGTTGCTGGCAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: REGSYLQQKTGESISLDGHERRW*WVAGRS Trigger: GCTCCTGCCAGCAACCCACCACCACCGTCTCTCATG...TCCGTCCAAGGAGATGCTCTCCCCGGTCTTCTGCTGCAGATAGGATCCTTCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000125516.8 ENSMUST00000131252.8 |
||
| CDS-3UTR CCA 90 bp | GGGAAGGATCCTATCTGCAGCAGAAGACCGGGGAGAGCATCTCCTTGGACGGAGGTTCATCGGTGGTGGTaGTGGCTGCATCCAAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: GKDPICSRRPGRASPWTEVHRWW*WLHPRW Trigger: CCACCTTGGATGCAGCCACCACCACCACCGATGAAC...CTCCGTCCAAGGAGATGCTCTCCCCGGTCTTCTGCTGCAGATAGGATCCTTCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000125516.8 ENSMUST00000131252.8 |
||
| CDS-3UTR CCA 90 bp | GGAAGGATCCTATCTGCAGCAGAAGACCGGGGAGAGCATCTCCTTGGACGGAGTGCCCTGGTTCATCGGTaGTGGTGGTGGCTGCATCCA | + |
|
Preference number: 4 (lower is better) Translates to: GRILSAAEDRGEHLLGRSALVHR*WWWLHP Trigger: TGGATGCAGCCACCACCACCACCGATGAACCAGGGC...ACTCCGTCCAAGGAGATGCTCTCCCCGGTCTTCTGCTGCAGATAGGATCCTTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000125516.8 ENSMUST00000131252.8 |
||
| CDS-3UTR CCA 90 bp | AATGGAGACAAGGGAAGGATCCTATCTGCAGCAGAAGACCGGGGAGAGCATCTCGGTGGGTGGGGGCCCTaGTTCATCGGTGGTGGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: NGDKGRILSAAEDRGEHLGGWGP*FIGGGG Trigger: ACCACCACCACCGATGAACCAGGGCCCCCACCCACC...GAGATGCTCTCCCCGGTCTTCTGCTGCAGATAGGATCCTTCCCTTGTCTCCATT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000125516.8 ENSMUST00000131252.8 |
||
| CDS-3UTR CCA 90 bp | GCAGAAGACCGGGGAGAGCATCTCCTTGGACGGAGTCTGAAGAAAGGAAAAGATCTGCCCACTGGGAGGTaGCGGAGGCGGCGGCATCAT | + |
|
Preference number: 4 (lower is better) Translates to: AEDRGEHLLGRSLKKGKDLPTGR*RRRRHH Trigger: ATGATGCCGCCGCCTCCGCCACCTCCCAGTGGGCAG...ATCTTTTCCTTTCTTCAGACTCCGTCCAAGGAGATGCTCTCCCCGGTCTTCTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000131252.8 |
||
| CDS-3UTR CCA 90 bp | TGGAGCCAGTGTGTTCCGATTCCGTCCACAAAAATAACTCAGGCTGCTTTGCCGCTGCCCACTGGGAGGTaGCGGAGGCGGCGGCATCAT | + |
|
Preference number: 4 (lower is better) Translates to: WSQCVPIPSTKITQAALPLPTGR*RRRRHH Trigger: ATGATGCCGCCGCCTCCGCCACCTCCCAGTGGGCAG...CGGCAAAGCAGCCTGAGTTATTTTTGTGGACGGAATCGGAACACACTGGCTCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000113487.8 ENSMUST00000124667.2 ENSMUST00000131252.8 |
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| CDS-3UTR CCA 90 bp | GGGAAGGATCCTATCTGCAGCAGAAGACCGGGGAGAGCATCTCCTTGGACGGAGATGGCAAGGGGGTGCTaGAAGCCATACTGCTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GKDPICSRRPGRASPWTEMARGC*KPYCCW Trigger: CCAGCAGCAGTATGGCTTCCAGCACCCCCTTGCCAT...CTCCGTCCAAGGAGATGCTCTCCCCGGTCTTCTGCTGCAGATAGGATCCTTCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000125516.8 ENSMUST00000131252.8 |
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| CDS-3UTR CCA 90 bp | AGCAGAAGACCGGGGAGAGCATCTCCTTGGACGGAGTCTGAAGAAAGGAAAAGACTGTGGTGGAGGCGGTaGGGGAGCTGGAGGCATCCC | + |
|
Preference number: 4 (lower is better) Translates to: SRRPGRASPWTESEERKRLWWRR*GSWRHP Trigger: GGGATGCCTCCAGCTCCCCCACCGCCTCCACCACAG...TCTTTTCCTTTCTTCAGACTCCGTCCAAGGAGATGCTCTCCCCGGTCTTCTGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000131252.8 |
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| CDS-3UTR TCA 90 bp | AAGCGAGTCCAGTCACTTGGCCCAGCCCAGTGCGTGCACACACACACATGCGTGGCAGTGACTAGAGCATaGAGAGGCTCATCTTCGCCT | + |
|
Preference number: 4 (lower is better) Translates to: KRVQSLGPAQCVHTHTCVAVTRA*RGSSSP Trigger: AGGCGAAGATGAGCCTCTTCATGCTCTAGTCACTGC...CACGCATGTGTGTGTGTGCACGCACTGGGCTGGGCCAAGTGACTGGACTCGCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131252.8 |
||
| CDS-3UTR TCA 90 bp | GGCTGTCTGCCTGGAAGGGTCACCAATGGGCGCGGAAAGTCCTCACTCTCATGGGGGTCGCCAGGCCTCTaGAATTTGCAATCAGAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: GCLPGRVTNGRGKSSLSWGSPGL*NLQSEA Trigger: TGCTTCTGATTGCAAATTTCAGAGGCCTGGCGACCC...CCATGAGAGTGAGGACTTTCCGCGCCCATTGGTGACCCTTCCAGGCAGACAGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131252.8 |
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| CDS-3UTR TCA 90 bp | GGAAGGATCCTATCTGCAGCAGAAGACCGGGGAGAGCATCTCCTTGGACGGAGTTGCTTTATCCTGAGCTaGCTGAGGGTCGCCAGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: GRILSAAEDRGEHLLGRSCFILS*LRVARP Trigger: AGGCCTGGCGACCCTCAGTCAGCTCAGGATAAAGCA...ACTCCGTCCAAGGAGATGCTCTCCCCGGTCTTCTGCTGCAGATAGGATCCTTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000131252.8 |
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| CDS-3UTR GCA 90 bp | ATCCTATCTGCAGCAGAAGACCGGGGAGAGCATCTCCTTGGACGGAGTCTGAAGGGTAGAGCCCACAGATaGAGGGACAGGAGCTTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: ILSAAEDRGEHLLGRSLKGRAHR*RDRSFP Trigger: GGGGAAGCTCCTGTCCCTGCATCTGTGGGCTCTACC...CTTCAGACTCCGTCCAAGGAGATGCTCTCCCCGGTCTTCTGCTGCAGATAGGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000125516.8 ENSMUST00000131252.8 |
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| CDS-3UTR GCA 90 bp | ATGGAGACAAGGGAAGGATCCTATCTGCAGCAGAAGACCGGGGAGAGCATCTCCAGCAGCAGGTCTTGGTaGACTAGCCAGGGGCGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: METREGSYLQQKTGESISSSRSW*TSQGRG Trigger: ACCACGCCCCTGGCTAGTGCACCAAGACCTGCTGCT...GGAGATGCTCTCCCCGGTCTTCTGCTGCAGATAGGATCCTTCCCTTGTCTCCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000125516.8 ENSMUST00000131252.8 |
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| CDS-3UTR GCA 90 bp | GGGAAGGAAGGGGCAAAGCAGCAGAACGAAGAACAAGGGACACAAGCCCCAGACTTGTGCTGCATGGGATaGCCACCATGCCCACCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: GKEGAKQQNEEQGTQAPDLCCMG*PPCPPV Trigger: GACAGGTGGGCATGGTGGGCATCCCATGCAGCACAA...GTCTGGGGCTTGTGTCCCTTGTTCTTCGTTCTGCTGCTTTGCCCCTTCCTTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000131252.8 |
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| CDS-3UTR GCA 90 bp | ATATGGAGCCAGTGTGTTCCGATTCCGTCCACAAAAATAACTCAGGCTGCTTTGGGAGGAGGGCCATGGTaGCCAGGTGGGTGGGGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: IWSQCVPIPSTKITQAALGGGPW*PGGWGP Trigger: GGGCCCCCACCCACCTGGGCACCATGGCCCTCCTCC...CAAAGCAGCCTGAGTTATTTTTGTGGACGGAATCGGAACACACTGGCTCCATAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000113487.8 ENSMUST00000124667.2 ENSMUST00000131252.8 |
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| CDS-3UTR GCA 90 bp | CTGTGCCCTGTACTGCTGGCAGGAGTGCAGGAAGATGTGAATCCCACTGCCAAAGGAGGCTGCTGCTGCTaGTGCTGCCATGGAGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: LCPVLLAGVQEDVNPTAKGGCCC*CCHGGR Trigger: TCTTCCTCCATGGCAGCAGCAGCAGCAGCAGCCTCC...TTTGGCAGTGGGATTCACATCTTCCTGCACTCCTGCCAGCAGTACAGGGCACAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000131252.8 |
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| CDS-3UTR GCA 90 bp | AGCAGAAGACCGGGGAGAGCATCTCCTTGGACGGAGTCTGAAGAAAGGAAAAGATGGAAGCCATACTGCTaGTGGGCGGAGGGGGTGGCG | + |
|
Preference number: 4 (lower is better) Translates to: SRRPGRASPWTESEERKRWKPYC*WAEGVA Trigger: CGCCACCCCCTCCGCCCAGCAGCAGTATGGCTTCCA...TCTTTTCCTTTCTTCAGACTCCGTCCAAGGAGATGCTCTCCCCGGTCTTCTGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000125516.8 ENSMUST00000131252.8 |
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| CDS-3UTR GCA 90 bp | CCAAAGCCTGTACCTAAACCATTTGCCCCTCTCCCTTTGGGAGGAGAGGAATGGTGCTGGAAGCCATACTaGTGCTGGGCGGAGGGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: PKPVPKPFAPLPLGGEEWCWKPY*CWAEGV Trigger: CACCCCCTCCGCCCAGCAGCAGTATGGCTTCCAGCA...CCATTCCTCTCCTCCCAAAGGGAGAGGGGCAAATGGTTTAGGTACAGGCTTTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000125516.8 ENSMUST00000131252.8 |
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| CDS-3UTR GCA 90 bp | ATGGAGACAAGGGAAGGATCCTATCTGCAGCAGAAGACCGGGGAGAGCATCTCCGCCATGGCAAGGGGGTaGTGGAAGCCATACTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: METREGSYLQQKTGESISAMARG*WKPYCC Trigger: GCAGCAGTATGGCTTCCAGCACCCCCTTGCCATGGC...GGAGATGCTCTCCCCGGTCTTCTGCTGCAGATAGGATCCTTCCCTTGTCTCCAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000125516.8 ENSMUST00000131252.8 |
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| CDS-3UTR GCA 90 bp | CCAGTGTGTTCCGATTCCGTCCACAAAAATAACTCAGGCTGCTTTGCCGAACCAGGCTCGGGCCATCGCTaGCGCGGGGAGGGATCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: PVCSDSVHKNNSGCFAEPGSGHR*RGEGSL Trigger: CAAAGATCCCTCCCCGCGGCAGCGATGGCCCGAGCC...TGGTTCGGCAAAGCAGCCTGAGTTATTTTTGTGGACGGAATCGGAACACACTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000113487.8 ENSMUST00000124667.2 |
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| CDS-3UTR GCA 90 bp | ATCCTATCTGCAGCAGAAGACCGGGGAGAGCATCTCCTTGGACGGAGTCTGAAGGGTGGCGGAGGCTGCTaGTGCTGCTGCTTTTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: ILSAAEDRGEHLLGRSLKGGGGC*CCCFSL Trigger: CAAGGAAAAGCAGCAGCAGCAGCAGCCTCCGCCACC...CTTCAGACTCCGTCCAAGGAGATGCTCTCCCCGGTCTTCTGCTGCAGATAGGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125516.8 |
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| CDS-3UTR CCA 90 bp | AGGGTCACCAATGGGCGCGGAAAGTCCTCACTCTCATGGCTCGGGCCATCGCTGTGCTCCATTGTGTCTTaGTTCCATCGGCTCCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RVTNGRGKSSLSWLGPSLCSIVS*FHRLLF Trigger: GAAGAGGAGCCGATGGAACCAAGACACAATGGAGCA...CAGCGATGGCCCGAGCCATGAGAGTGAGGACTTTCCGCGCCCATTGGTGACCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113485.9 ENSMUST00000131252.8 |
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| CDS-3UTR CCA 90 bp | TGCAGCAGAAGACCGGGGAGAGCATCTCCTTGGACGGAGTCTGAAGAAAGGAAAGAGAGACGGTGGTGGTaGGTTGCTGGCAGGAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: CSRRPGRASPWTESEERKERRWW*VAGRSS Trigger: GCTGCTCCTGCCAGCAACCCACCACCACCGTCTCTC...TTTCCTTTCTTCAGACTCCGTCCAAGGAGATGCTCTCCCCGGTCTTCTGCTGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000125516.8 ENSMUST00000131252.8 |
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| CDS-3UTR CCA 90 bp | GAGAGGAATGGAGACAAGGGAAGGATCCTATCTGCAGCAGAAGACCGGGGAGAGCATGAGAGACGGTGGTaGTGGGTTGCTGGCAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: ERNGDKGRILSAAEDRGEHERRW*WVAGRS Trigger: GCTCCTGCCAGCAACCCACCACCACCGTCTCTCATG...CTCTCCCCGGTCTTCTGCTGCAGATAGGATCCTTCCCTTGTCTCCATTCCTCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000125516.8 ENSMUST00000131252.8 |
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| CDS-3UTR CCA 90 bp | GAGGAATGGAGACAAGGGAAGGATCCTATCTGCAGCAGAAGACCGGGGAGAGCAGCCCACCTGTCAGGCTaGGTAATGGGTGTGGGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: EEWRQGKDPICSRRPGRAAHLSG*VMGVGS Trigger: GCTTCCCACACCCATTACCCAGCCTGACAGGTGGGC...TGCTCTCCCCGGTCTTCTGCTGCAGATAGGATCCTTCCCTTGTCTCCATTCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000125516.8 ENSMUST00000131252.8 |
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| CDS-3UTR CCA 90 bp | GAGCATGAAAAAGACTCCAGGCTGGCCTATGGTGGCTTGGGCTGTGCCCTGTACTTGGGTTGTGCTGCATaGGATGCCCACCATGCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: EHEKDSRLAYGGLGCALYLGCAA*DAHHAH Trigger: GTGGGCATGGTGGGCATCCCATGCAGCACAACCCAA...GTACAGGGCACAGCCCAAGCCACCATAGGCCAGCCTGGAGTCTTTTTCATGCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000131252.8 |
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| CDS-3UTR CCA 90 bp | GAGGAGAGGAATGGAGACAAGGGAAGGATCCTATCTGCAGCAGAAGACCGGGGACATCGGTGGTGGTGGTaGCTGCATCCAAGGTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: EERNGDKGRILSAAEDRGHRWWW*LHPRWW Trigger: CCACCACCTTGGATGCAGCCACCACCACCACCGATG...TCCCCGGTCTTCTGCTGCAGATAGGATCCTTCCCTTGTCTCCATTCCTCTCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000125516.8 ENSMUST00000131252.8 |
||
| CDS-3UTR CCA 90 bp | GGAGAGGAATGGAGACAAGGGAAGGATCCTATCTGCAGCAGAAGACCGGGGAGAGCCCTGGTTCATCGGTaGTGGTGGTGGCTGCATCCA | + |
|
Preference number: 4 (lower is better) Translates to: GEEWRQGKDPICSRRPGRALVHR*WWWLHP Trigger: TGGATGCAGCCACCACCACCACCGATGAACCAGGGC...TCTCCCCGGTCTTCTGCTGCAGATAGGATCCTTCCCTTGTCTCCATTCCTCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000125516.8 ENSMUST00000131252.8 |
||
| CDS-3UTR CCA 90 bp | AATAGCCAAAGCCTGTACCTAAACCATTTGCCCCTCTCCCTTTGGGAGGAGAGGAAGCCATACTGCTGCTaGGCGGAGGGGGTGGCGGAG | + |
|
Preference number: 4 (lower is better) Translates to: NSQSLYLNHLPLSLWEERKPYCC*AEGVAE Trigger: CTCCGCCACCCCCTCCGCCCAGCAGCAGTATGGCTT...CCTCTCCTCCCAAAGGGAGAGGGGCAAATGGTTTAGGTACAGGCTTTGGCTATT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000125516.8 ENSMUST00000131252.8 |
||
| CDS-3UTR CCA 90 bp | AGGATCCTATCTGCAGCAGAAGACCGGGGAGAGCATCTCCTTGGACGGAGTCTGGGATCTTTGCTGCCATaGCAAGGGGGTGCTGGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: RILSAAEDRGEHLLGRSLGSLLP*QGGAGS Trigger: GCTTCCAGCACCCCCTTGCCATGGCAGCAAAGATCC...CAGACTCCGTCCAAGGAGATGCTCTCCCCGGTCTTCTGCTGCAGATAGGATCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000125516.8 |
||
| CDS-3UTR CCA 90 bp | AAGGATCCTATCTGCAGCAGAAGACCGGGGAGAGCATCTCCTTGGACGGAGTCTCTGAGGCTGTCTGCCTaGAAGGGTCACCAATGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: KDPICSRRPGRASPWTESLRLSA*KGHQWA Trigger: CGCCCATTGGTGACCCTTCCAGGCAGACAGCCTCAG...AGACTCCGTCCAAGGAGATGCTCTCCCCGGTCTTCTGCTGCAGATAGGATCCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113489.8 ENSMUST00000125516.8 |
||
| CDS-3UTR CCA 90 bp | AAGCCTGTACCTAAACCATTTGCCCCTCTCCCTTTGGGAGGAGAGGAATGGAGACGGAGGAGGAGGGGGTaGGGCATACATCATGCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: KPVPKPFAPLPLGGEEWRRRRRG*GIHHAG Trigger: GCCGGCATGATGTATGCCCCACCCCCTCCTCCTCCG...TCTCCATTCCTCTCCTCCCAAAGGGAGAGGGGCAAATGGTTTAGGTACAGGCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000131252.8 |
||
| CDS-3UTR TCA 90 bp | CTGTGCCCTGTACTGCTGGCAGGAGTGCAGGAAGATGTGAATCCCACTGCCAAATGCTTTATCCTGAGCTaGCTGAGGGTCGCCAGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LCPVLLAGVQEDVNPTAKCFILS*LRVARP Trigger: AGGCCTGGCGACCCTCAGTCAGCTCAGGATAAAGCA...TTTGGCAGTGGGATTCACATCTTCCTGCACTCCTGCCAGCAGTACAGGGCACAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000131252.8 |
||
| CDS-3UTR TCA 90 bp | ATCCTATCTGCAGCAGAAGACCGGGGAGAGCATCTCCTTGGACGGAGTCTGAAGCAGGGTGGGCGGCTCTaGGTTGTAGACATGAGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: ILSAAEDRGEHLLGRSLKQGGRL*VVDMRD Trigger: GTCTCTCATGTCTACAACTCAGAGCCGCCCACCCTG...CTTCAGACTCCGTCCAAGGAGATGCTCTCCCCGGTCTTCTGCTGCAGATAGGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000125516.8 ENSMUST00000131252.8 |
||
| CDS-3UTR TCA 90 bp | GGAAGGAAGGGGCAAAGCAGCAGAACGAAGAACAAGGGACACAAGCCCCAGACACAGGGTGGGCGGCTCTaGGTTGTAGACATGAGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: GRKGQSSRTKNKGHKPQTQGGRL*VVDMRD Trigger: GTCTCTCATGTCTACAACTCAGAGCCGCCCACCCTG...TGTCTGGGGCTTGTGTCCCTTGTTCTTCGTTCTGCTGCTTTGCCCCTTCCTTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000131252.8 |
||
| CDS-3UTR TCA 90 bp | GGAAGGGGCAAAGCAGCAGAACGAAGAACAAGGGACACAAGCCCCAGACACTGCGTACTTCCCAGGTACTaGTCCATTGGAGGAGGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: GRGKAAERRTRDTSPRHCVLPRY*SIGGGP Trigger: TGGCCCTCCTCCAATGGATCAGTACCTGGGAAGTAC...GCAGTGTCTGGGGCTTGTGTCCCTTGTTCTTCGTTCTGCTGCTTTGCCCCTTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000113487.8 ENSMUST00000131252.8 |
||
| CDS-3UTR GCA 90 bp | CCAAAGCCTGTACCTAAACCATTTGCCCCTCTCCCTTTGGGAGGAGAGGAATGGGGTAGAGCCCACAGATaGAGGGACAGGAGCTTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: PKPVPKPFAPLPLGGEEWGRAHR*RDRSFP Trigger: GGGGAAGCTCCTGTCCCTGCATCTGTGGGCTCTACC...CCATTCCTCTCCTCCCAAAGGGAGAGGGGCAAATGGTTTAGGTACAGGCTTTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000125516.8 ENSMUST00000131252.8 |
||
| CDS-3UTR GCA 90 bp | CTATCTGCAGCAGAAGACCGGGGAGAGCATCTCCTTGGACGGAGTCTGAAGAAAAGCAGCAGGTCTTGGTaGACTAGCCAGGGGCGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: LSAAEDRGEHLLGRSLKKSSRSW*TSQGRG Trigger: ACCACGCCCCTGGCTAGTGCACCAAGACCTGCTGCT...TTTCTTCAGACTCCGTCCAAGGAGATGCTCTCCCCGGTCTTCTGCTGCAGATAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000125516.8 ENSMUST00000131252.8 |
||
| CDS-3UTR GCA 90 bp | AGGATCCTATCTGCAGCAGAAGACCGGGGAGAGCATCTCCTTGGACGGAGTCTGGACCACCTCCATGCATaGCATGGTAGGGCCGATTCT | + |
|
Preference number: 4 (lower is better) Translates to: RILSAAEDRGEHLLGRSLDHLHA*HGRADS Trigger: AGAATCGGCCCTACCATGGCATGCATGGAGGTGGTC...CAGACTCCGTCCAAGGAGATGCTCTCCCCGGTCTTCTGCTGCAGATAGGATCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000125516.8 ENSMUST00000131252.8 |
||
| CDS-3UTR GCA 90 bp | AGGGAAGGATCCTATCTGCAGCAGAAGACCGGGGAGAGCATCTCCTTGGACGGAGACCACCTCCATGCATaGCATGGTAGGGCCGATTCT | + |
|
Preference number: 4 (lower is better) Translates to: REGSYLQQKTGESISLDGDHLHA*HGRADS Trigger: AGAATCGGCCCTACCATGGCATGCATGGAGGTGGTC...TCCGTCCAAGGAGATGCTCTCCCCGGTCTTCTGCTGCAGATAGGATCCTTCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000125516.8 ENSMUST00000131252.8 |
||
| CDS-3UTR GCA 90 bp | ATGGAGACAAGGGAAGGATCCTATCTGCAGCAGAAGACCGGGGAGAGCATCTCCTTGTGCTGCATGGGATaGCCACCATGCCCACCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: METREGSYLQQKTGESISLCCMG*PPCPPV Trigger: GACAGGTGGGCATGGTGGGCATCCCATGCAGCACAA...GGAGATGCTCTCCCCGGTCTTCTGCTGCAGATAGGATCCTTCCCTTGTCTCCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000125516.8 ENSMUST00000131252.8 |
||
| CDS-3UTR GCA 90 bp | GTTCCGATTCCGTCCACAAAAATAACTCAGGCTGCTTTGCCGAACCATCCTGTCTGGAAGCCATACTGCTaGTGGGCGGAGGGGGTGGCG | + |
|
Preference number: 4 (lower is better) Translates to: VPIPSTKITQAALPNHPVWKPYC*WAEGVA Trigger: CGCCACCCCCTCCGCCCAGCAGCAGTATGGCTTCCA...GACAGGATGGTTCGGCAAAGCAGCCTGAGTTATTTTTGTGGACGGAATCGGAAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000113487.8 ENSMUST00000124667.2 ENSMUST00000131252.8 |
||
| CDS-3UTR GCA 90 bp | CCAAAGCCTGTACCTAAACCATTTGCCCCTCTCCCTTTGGGAGGAGAGGAATGGGCCATGGCAAGGGGGTaGTGGAAGCCATACTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: PKPVPKPFAPLPLGGEEWAMARG*WKPYCC Trigger: GCAGCAGTATGGCTTCCAGCACCCCCTTGCCATGGC...CCATTCCTCTCCTCCCAAAGGGAGAGGGGCAAATGGTTTAGGTACAGGCTTTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000125516.8 ENSMUST00000131252.8 |
||
| CDS-3UTR GCA 90 bp | CCAGTGTGTTCCGATTCCGTCCACAAAAATAACTCAGGCTGCTTTGCCGAACCAGCCGCCTGCTGCTGTTaGCATGGCGGGATGGACCCT | + |
|
Preference number: 4 (lower is better) Translates to: PVCSDSVHKNNSGCFAEPAACCC*HGGMDP Trigger: AGGGTCCATCCCGCCATGGCAACAGCAGCAGGCGGC...TGGTTCGGCAAAGCAGCCTGAGTTATTTTTGTGGACGGAATCGGAACACACTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131252.8 |
||
| CDS-3UTR GCA 90 bp | GAGGAGAGGAATGGAGACAAGGGAAGGATCCTATCTGCAGCAGAAGACCGGGGAGCTGCTGAGGCTGTCTaGCTGGAAGGGTCACCAATG | + |
|
Preference number: 4 (lower is better) Translates to: EERNGDKGRILSAAEDRGAAEAV*LEGSPM Trigger: CATTGGTGACCCTTCCAGGCAGACAGCCTCAGCAGC...TCCCCGGTCTTCTGCTGCAGATAGGATCCTTCCCTTGTCTCCATTCCTCTCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113489.8 ENSMUST00000125516.8 |
||
| CDS-3UTR CCA 90 bp | AGACACTCGATGCTACAGGTGCCAGGAAAGCTCAAGCTGGCGCCCCACTACCACCTCGCTGTTGTAGATTaGTTCAGGGGAAGGGGACCT | + |
|
Preference number: 4 (lower is better) Translates to: RHSMLQVPGKLKLAPHYHLAVVD*FRGRGP Trigger: AGGTCCCCTTCCCCTGAACCAATCTACAACAGCGAG...GTGGTAGTGGGGCGCCAGCTTGAGCTTTCCTGGCACCTGTAGCATCGAGTGTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000113485.9 ENSMUST00000131252.8 |
||
| CDS-3UTR CCA 90 bp | GGGAAGGATCCTATCTGCAGCAGAAGACCGGGGAGAGCATCTCCTTGGACGGAGCTCGCTGTTGTAGATTaGTTCAGGGGAAGGGGACCT | + |
|
Preference number: 4 (lower is better) Translates to: GKDPICSRRPGRASPWTELAVVD*FRGRGP Trigger: AGGTCCCCTTCCCCTGAACCAATCTACAACAGCGAG...CTCCGTCCAAGGAGATGCTCTCCCCGGTCTTCTGCTGCAGATAGGATCCTTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000113485.9 ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000131252.8 |
||
| CDS-3UTR CCA 90 bp | TCGATGCTACAGGTGCCAGGAAAGCTCAAGCTGGCGCCCCACTACCACTGCCCGTTCCGTAGATCGTTCTaGTCCTCTGGGGTCTCAATA | + |
|
Preference number: 4 (lower is better) Translates to: SMLQVPGKLKLAPHYHCPFRRSF*SSGVSI Trigger: TATTGAGACCCCAGAGGACCAGAACGATCTACGGAA...CGGGCAGTGGTAGTGGGGCGCCAGCTTGAGCTTTCCTGGCACCTGTAGCATCGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131252.8 |
||
| CDS-3UTR CCA 90 bp | TGGAGCCAGTGTGTTCCGATTCCGTCCACAAAAATAACTCAGGCTGCTTTGCCGGAGAGACGGTGGTGGTaGGTTGCTGGCAGGAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: WSQCVPIPSTKITQAALPERRWW*VAGRSS Trigger: GCTGCTCCTGCCAGCAACCCACCACCACCGTCTCTC...CGGCAAAGCAGCCTGAGTTATTTTTGTGGACGGAATCGGAACACACTGGCTCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000113487.8 ENSMUST00000131252.8 |
||
| CDS-3UTR CCA 90 bp | CTATCTGCAGCAGAAGACCGGGGAGAGCATCTCCTTGGACGGAGTCTGAAGAAAGCCCACCTGTCAGGCTaGGTAATGGGTGTGGGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: LSAAEDRGEHLLGRSLKKAHLSG*VMGVGS Trigger: GCTTCCCACACCCATTACCCAGCCTGACAGGTGGGC...TTTCTTCAGACTCCGTCCAAGGAGATGCTCTCCCCGGTCTTCTGCTGCAGATAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000125516.8 ENSMUST00000131252.8 |
||
| CDS-3UTR CCA 90 bp | GGGAAGGATCCTATCTGCAGCAGAAGACCGGGGAGAGCATCTCCTTGGACGGAGTGGCTGCATCCAAGGTaGTGGTGGTCCATTTGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: GKDPICSRRPGRASPWTEWLHPR*WWSIWV Trigger: AACCCAAATGGACCACCACCACCTTGGATGCAGCCA...CTCCGTCCAAGGAGATGCTCTCCCCGGTCTTCTGCTGCAGATAGGATCCTTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000125516.8 ENSMUST00000131252.8 |
||
| CDS-3UTR CCA 90 bp | CCAAAGCCTGTACCTAAACCATTTGCCCCTCTCCCTTTGGGAGGAGAGGAATGGCATCGGTGGTGGTGGTaGCTGCATCCAAGGTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: PKPVPKPFAPLPLGGEEWHRWWW*LHPRWW Trigger: CCACCACCTTGGATGCAGCCACCACCACCACCGATG...CCATTCCTCTCCTCCCAAAGGGAGAGGGGCAAATGGTTTAGGTACAGGCTTTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000125516.8 ENSMUST00000131252.8 |
||
| CDS-3UTR CCA 90 bp | GAGGAATGGAGACAAGGGAAGGATCCTATCTGCAGCAGAAGACCGGGGAGAGCAGTTCATCGGTGGTGGTaGTGGCTGCATCCAAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: EEWRQGKDPICSRRPGRAVHRWW*WLHPRW Trigger: CCACCTTGGATGCAGCCACCACCACCACCGATGAAC...TGCTCTCCCCGGTCTTCTGCTGCAGATAGGATCCTTCCCTTGTCTCCATTCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000125516.8 ENSMUST00000131252.8 |
||
| CDS-3UTR CCA 90 bp | ACAAGGGAAGGATCCTATCTGCAGCAGAAGACCGGGGAGAGCATCTCCTTGGACCTGGTTCATCGGTGGTaGTGGTGGCTGCATCCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: TREGSYLQQKTGESISLDLVHRW*WWLHPR Trigger: CCTTGGATGCAGCCACCACCACCACCGATGAACCAG...GTCCAAGGAGATGCTCTCCCCGGTCTTCTGCTGCAGATAGGATCCTTCCCTTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000125516.8 ENSMUST00000131252.8 |
||
| CDS-3UTR CCA 90 bp | GAGGAATGGAGACAAGGGAAGGATCCTATCTGCAGCAGAAGACCGGGGAGAGCACTGGTTCATCGGTGGTaGTGGTGGCTGCATCCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: EEWRQGKDPICSRRPGRALVHRW*WWLHPR Trigger: CCTTGGATGCAGCCACCACCACCACCGATGAACCAG...TGCTCTCCCCGGTCTTCTGCTGCAGATAGGATCCTTCCCTTGTCTCCATTCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000125516.8 ENSMUST00000131252.8 |
||
| CDS-3UTR CCA 90 bp | AATGGAGACAAGGGAAGGATCCTATCTGCAGCAGAAGACCGGGGAGAGCATCTCGCCCTGGTTCATCGGTaGTGGTGGTGGCTGCATCCA | + |
|
Preference number: 4 (lower is better) Translates to: NGDKGRILSAAEDRGEHLALVHR*WWWLHP Trigger: TGGATGCAGCCACCACCACCACCGATGAACCAGGGC...GAGATGCTCTCCCCGGTCTTCTGCTGCAGATAGGATCCTTCCCTTGTCTCCATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000125516.8 ENSMUST00000131252.8 |
||
| CDS-3UTR CCA 90 bp | ATGGAGACAAGGGAAGGATCCTATCTGCAGCAGAAGACCGGGGAGAGCATCTCCCAGGTACTGATCCATTaGAGGAGGGCCATGGTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: METREGSYLQQKTGESISQVLIH*RRAMVP Trigger: GGGCACCATGGCCCTCCTCCAATGGATCAGTACCTG...GGAGATGCTCTCCCCGGTCTTCTGCTGCAGATAGGATCCTTCCCTTGTCTCCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000113487.8 ENSMUST00000125516.8 ENSMUST00000131252.8 |
||
| CDS-3UTR CCA 90 bp | GTTCCGATTCCGTCCACAAAAATAACTCAGGCTGCTTTGCCGAACCATCCTGTCAAGCCATACTGCTGCTaGGCGGAGGGGGTGGCGGAG | + |
|
Preference number: 4 (lower is better) Translates to: VPIPSTKITQAALPNHPVKPYCC*AEGVAE Trigger: CTCCGCCACCCCCTCCGCCCAGCAGCAGTATGGCTT...GACAGGATGGTTCGGCAAAGCAGCCTGAGTTATTTTTGTGGACGGAATCGGAAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000113487.8 ENSMUST00000124667.2 ENSMUST00000131252.8 |
||
| CDS-3UTR CCA 90 bp | GGAAGGAAGGGGCAAAGCAGCAGAACGAAGAACAAGGGACACAAGCCCCAGACAATGGCAAGGGGGTGCTaGAAGCCATACTGCTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GRKGQSSRTKNKGHKPQTMARGC*KPYCCW Trigger: CCAGCAGCAGTATGGCTTCCAGCACCCCCTTGCCAT...TGTCTGGGGCTTGTGTCCCTTGTTCTTCGTTCTGCTGCTTTGCCCCTTCCTTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000131252.8 |
||
| CDS-3UTR CCA 90 bp | GGAGAGGAATGGAGACAAGGGAAGGATCCTATCTGCAGCAGAAGACCGGGGAGAATGGCAAGGGGGTGCTaGAAGCCATACTGCTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GEEWRQGKDPICSRRPGRMARGC*KPYCCW Trigger: CCAGCAGCAGTATGGCTTCCAGCACCCCCTTGCCAT...TCTCCCCGGTCTTCTGCTGCAGATAGGATCCTTCCCTTGTCTCCATTCCTCTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000125516.8 ENSMUST00000131252.8 |
||
| CDS-3UTR CCA 90 bp | CTATCTGCAGCAGAAGACCGGGGAGAGCATCTCCTTGGACGGAGTCTGAAGAAACTGAGGCTGTCTGCCTaGAAGGGTCACCAATGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: LSAAEDRGEHLLGRSLKKLRLSA*KGHQWA Trigger: CGCCCATTGGTGACCCTTCCAGGCAGACAGCCTCAG...TTTCTTCAGACTCCGTCCAAGGAGATGCTCTCCCCGGTCTTCTGCTGCAGATAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113489.8 ENSMUST00000125516.8 |
||
| CDS-3UTR TCA 90 bp | GAGGAGAGGAATGGAGACAAGGGAAGGATCCTATCTGCAGCAGAAGACCGGGGAGTACTTCCCAGGTACTaGTCCATTGGAGGAGGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: EERNGDKGRILSAAEDRGVLPRY*SIGGGP Trigger: TGGCCCTCCTCCAATGGATCAGTACCTGGGAAGTAC...TCCCCGGTCTTCTGCTGCAGATAGGATCCTTCCCTTGTCTCCATTCCTCTCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000113487.8 ENSMUST00000125516.8 ENSMUST00000131252.8 |
||
| CDS-3UTR GCA 90 bp | AAGGATCCTATCTGCAGCAGAAGACCGGGGAGAGCATCTCCTTGGACGGAGTCTCGCGTCTCTGAGCTCTaGCAGGGCCTTAAGATCCTA | + |
|
Preference number: 4 (lower is better) Translates to: KDPICSRRPGRASPWTESRVSEL*QGLKIL Trigger: TAGGATCTTAAGGCCCTGGCAGAGCTCAGAGACGCG...AGACTCCGTCCAAGGAGATGCTCTCCCCGGTCTTCTGCTGCAGATAGGATCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000131252.8 |
||
| CDS-3UTR GCA 90 bp | ATGGAGACAAGGGAAGGATCCTATCTGCAGCAGAAGACCGGGGAGAGCATCTCCCGCGTCTCTGAGCTCTaGCAGGGCCTTAAGATCCTA | + |
|
Preference number: 4 (lower is better) Translates to: METREGSYLQQKTGESISRVSEL*QGLKIL Trigger: TAGGATCTTAAGGCCCTGGCAGAGCTCAGAGACGCG...GGAGATGCTCTCCCCGGTCTTCTGCTGCAGATAGGATCCTTCCCTTGTCTCCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000131252.8 |
||
| CDS-3UTR GCA 90 bp | GCACACACAATCACATGCGTGCATCCCAATGTCTGGCTCCATATGGTGAGGTTCGGTAGAGCCCACAGATaGAGGGACAGGAGCTTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: AHTITCVHPNVWLHMVRFGRAHR*RDRSFP Trigger: GGGGAAGCTCCTGTCCCTGCATCTGTGGGCTCTACC...GAACCTCACCATATGGAGCCAGACATTGGGATGCACGCATGTGATTGTGTGTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131252.8 |
||
| CDS-3UTR GCA 90 bp | GCAGAAGACCGGGGAGAGCATCTCCTTGGACGGAGTCTGAAGAAAGGAAAAGATAGCAGCAGGTCTTGGTaGACTAGCCAGGGGCGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: AEDRGEHLLGRSLKKGKDSSRSW*TSQGRG Trigger: ACCACGCCCCTGGCTAGTGCACCAAGACCTGCTGCT...ATCTTTTCCTTTCTTCAGACTCCGTCCAAGGAGATGCTCTCCCCGGTCTTCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000125516.8 ENSMUST00000131252.8 |
||
| CDS-3UTR GCA 90 bp | CTGTGCCCTGTACTGCTGGCAGGAGTGCAGGAAGATGTGAATCCCACTGCCAAAGACCACCTCCATGCATaGCATGGTAGGGCCGATTCT | + |
|
Preference number: 4 (lower is better) Translates to: LCPVLLAGVQEDVNPTAKDHLHA*HGRADS Trigger: AGAATCGGCCCTACCATGGCATGCATGGAGGTGGTC...TTTGGCAGTGGGATTCACATCTTCCTGCACTCCTGCCAGCAGTACAGGGCACAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000131252.8 |
||
| CDS-3UTR GCA 90 bp | GAGAGGAATGGAGACAAGGGAAGGATCCTATCTGCAGCAGAAGACCGGGGAGAGCCATTTGGGTTGTGCTaGATGGGATGCCCACCATGC | + |
|
Preference number: 4 (lower is better) Translates to: ERNGDKGRILSAAEDRGEPFGLC*MGCPPC Trigger: GCATGGTGGGCATCCCATGCAGCACAACCCAAATGG...CTCTCCCCGGTCTTCTGCTGCAGATAGGATCCTTCCCTTGTCTCCATTCCTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000125516.8 ENSMUST00000131252.8 |
||
| CDS-3UTR GCA 90 bp | ACAAGGGAAGGATCCTATCTGCAGCAGAAGACCGGGGAGAGCATCTCCTTGGACGGTCCATTTGGGTTGTaGTGCATGGGATGCCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: TREGSYLQQKTGESISLDGPFGL*CMGCPP Trigger: TGGTGGGCATCCCATGCAGCACAACCCAAATGGACC...GTCCAAGGAGATGCTCTCCCCGGTCTTCTGCTGCAGATAGGATCCTTCCCTTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000125516.8 ENSMUST00000131252.8 |
||
| CDS-3UTR GCA 90 bp | GAGAGGAATGGAGACAAGGGAAGGATCCTATCTGCAGCAGAAGACCGGGGAGAGGGTCCATTTGGGTTGTaGTGCATGGGATGCCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: ERNGDKGRILSAAEDRGEGPFGL*CMGCPP Trigger: TGGTGGGCATCCCATGCAGCACAACCCAAATGGACC...CTCTCCCCGGTCTTCTGCTGCAGATAGGATCCTTCCCTTGTCTCCATTCCTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000125516.8 ENSMUST00000131252.8 |
||
| CDS-3UTR GCA 90 bp | CCGATTCCGTCCACAAAAATAACTCAGGCTGCTTTGCCGAACCATCCTGTCCACGGGAGGGATCTTTGCTaGCATGGCAAGGGGGTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: PIPSTKITQAALPNHPVHGRDLC*HGKGVL Trigger: CAGCACCCCCTTGCCATGGCAGCAAAGATCCCTCCC...GTGGACAGGATGGTTCGGCAAAGCAGCCTGAGTTATTTTTGTGGACGGAATCGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000113487.8 ENSMUST00000124667.2 |
||
| CDS-3UTR GCA 90 bp | GCAGAAGACCGGGGAGAGCATCTCCTTGGACGGAGTCTGAAGAAAGGAAAAGATGGGAGGGATCTTTGCTaGCATGGCAAGGGGGTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: AEDRGEHLLGRSLKKGKDGRDLC*HGKGVL Trigger: CAGCACCCCCTTGCCATGGCAGCAAAGATCCCTCCC...ATCTTTTCCTTTCTTCAGACTCCGTCCAAGGAGATGCTCTCCCCGGTCTTCTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000125516.8 |
||
| CDS-3UTR GCA 90 bp | ATGGAGCCAGTGTGTTCCGATTCCGTCCACAAAAATAACTCAGGCTGCTTTGCCGTGGGGCATACATCATaGCGGCGGAACCAGGTGGCG | + |
|
Preference number: 4 (lower is better) Translates to: MEPVCSDSVHKNNSGCFAVGHTS*RRNQVA Trigger: CGCCACCTGGTTCCGCCGGCATGATGTATGCCCCAC...GGCAAAGCAGCCTGAGTTATTTTTGTGGACGGAATCGGAACACACTGGCTCCAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000131252.8 |
||
| CDS-3UTR CCA 90 bp | AAGCGAGTCCAGTCACTTGGCCCAGCCCAGTGCGTGCACACACACACATGCGTGAACTGTAGGCATGCCTaGAATCACTGTCTTCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: KRVQSLGPAQCVHTHTCVNCRHA*NHCLLL Trigger: GAGCAGAAGACAGTGATTCCAGGCATGCCTACAGTT...CACGCATGTGTGTGTGTGCACGCACTGGGCTGGGCCAAGTGACTGGACTCGCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113485.9 ENSMUST00000131252.8 |
||
| CDS-3UTR CCA 90 bp | AAGCCTGTACCTAAACCATTTGCCCCTCTCCCTTTGGGAGGAGAGGAATGGAGAAGGAGCAGCAGGTCTTaGTGCACTAGCCAGGGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: KPVPKPFAPLPLGGEEWRRSSRS*CTSQGR Trigger: ACGCCCCTGGCTAGTGCACCAAGACCTGCTGCTCCT...TCTCCATTCCTCTCCTCCCAAAGGGAGAGGGGCAAATGGTTTAGGTACAGGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000125516.8 ENSMUST00000131252.8 |
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| CDS-3UTR CCA 90 bp | AGCAGAAGACCGGGGAGAGCATCTCCTTGGACGGAGTCTGAAGAAAGGAAAAGAGCCCACCTGTCAGGCTaGGTAATGGGTGTGGGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: SRRPGRASPWTESEERKRAHLSG*VMGVGS Trigger: GCTTCCCACACCCATTACCCAGCCTGACAGGTGGGC...TCTTTTCCTTTCTTCAGACTCCGTCCAAGGAGATGCTCTCCCCGGTCTTCTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000125516.8 ENSMUST00000131252.8 |
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| CDS-3UTR CCA 90 bp | TGCAGCAGAAGACCGGGGAGAGCATCTCCTTGGACGGAGTCTGAAGAAAGGAAATTGGGTTGTGCTGCATaGGATGCCCACCATGCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: CSRRPGRASPWTESEERKLGCAA*DAHHAH Trigger: GTGGGCATGGTGGGCATCCCATGCAGCACAACCCAA...TTTCCTTTCTTCAGACTCCGTCCAAGGAGATGCTCTCCCCGGTCTTCTGCTGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000125516.8 ENSMUST00000131252.8 |
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| CDS-3UTR CCA 90 bp | AGGGAAGGATCCTATCTGCAGCAGAAGACCGGGGAGAGCATCTCCTTGGACGGACTGCATCCAAGGTGGTaGTGGTCCATTTGGGTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: REGSYLQQKTGESISLDGLHPRW*WSIWVV Trigger: CACAACCCAAATGGACCACCACCACCTTGGATGCAG...TCCGTCCAAGGAGATGCTCTCCCCGGTCTTCTGCTGCAGATAGGATCCTTCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000125516.8 ENSMUST00000131252.8 |
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| CDS-3UTR CCA 90 bp | TGGAGCCAGTGTGTTCCGATTCCGTCCACAAAAATAACTCAGGCTGCTTTGCCGCATCGGTGGTGGTGGTaGCTGCATCCAAGGTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: WSQCVPIPSTKITQAALPHRWWW*LHPRWW Trigger: CCACCACCTTGGATGCAGCCACCACCACCACCGATG...CGGCAAAGCAGCCTGAGTTATTTTTGTGGACGGAATCGGAACACACTGGCTCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000113487.8 ENSMUST00000124667.2 ENSMUST00000131252.8 |
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| CDS-3UTR CCA 90 bp | AGCAGAAGACCGGGGAGAGCATCTCCTTGGACGGAGTCTGAAGAAAGGAAAAGAGCCCTGGTTCATCGGTaGTGGTGGTGGCTGCATCCA | + |
|
Preference number: 4 (lower is better) Translates to: SRRPGRASPWTESEERKRALVHR*WWWLHP Trigger: TGGATGCAGCCACCACCACCACCGATGAACCAGGGC...TCTTTTCCTTTCTTCAGACTCCGTCCAAGGAGATGCTCTCCCCGGTCTTCTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000125516.8 ENSMUST00000131252.8 |
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| CDS-3UTR CCA 90 bp | TGTGTTCCGATTCCGTCCACAAAAATAACTCAGGCTGCTTTGCCGAACCATCCTGGTGGGTGGGGGCCCTaGTTCATCGGTGGTGGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: CVPIPSTKITQAALPNHPGGWGP*FIGGGG Trigger: ACCACCACCACCGATGAACCAGGGCCCCCACCCACC...AGGATGGTTCGGCAAAGCAGCCTGAGTTATTTTTGTGGACGGAATCGGAACACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000113487.8 ENSMUST00000124667.2 ENSMUST00000131252.8 |
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| CDS-3UTR CCA 90 bp | AATGGAGACAAGGGAAGGATCCTATCTGCAGCAGAAGACCGGGGAGAGCATCTCCAGGTACTGATCCATTaGAGGAGGGCCATGGTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: NGDKGRILSAAEDRGEHLQVLIH*RRAMVP Trigger: GGGCACCATGGCCCTCCTCCAATGGATCAGTACCTG...GAGATGCTCTCCCCGGTCTTCTGCTGCAGATAGGATCCTTCCCTTGTCTCCATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000113487.8 ENSMUST00000125516.8 ENSMUST00000131252.8 |
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| CDS-3UTR CCA 90 bp | AAGGAAGGGGCAAAGCAGCAGAACGAAGAACAAGGGACACAAGCCCCAGACACTGGATCTTTGCTGCCATaGCAAGGGGGTGCTGGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: KEGAKQQNEEQGTQAPDTGSLLP*QGGAGS Trigger: GCTTCCAGCACCCCCTTGCCATGGCAGCAAAGATCC...AGTGTCTGGGGCTTGTGTCCCTTGTTCTTCGTTCTGCTGCTTTGCCCCTTCCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 |
||
| CDS-3UTR CCA 90 bp | AGGAAGGGGCAAAGCAGCAGAACGAAGAACAAGGGACACAAGCCCCAGACACTGCGTATTTTGCTGCCATaGCAAGGGGGTGCTGGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: RKGQSSRTKNKGHKPQTLRILLP*QGGAGS Trigger: GCTTCCAGCACCCCCTTGCCATGGCAGCAAAATACG...CAGTGTCTGGGGCTTGTGTCCCTTGTTCTTCGTTCTGCTGCTTTGCCCCTTCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000131252.8 |
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| CDS-3UTR CCA 90 bp | GGAGAGAAGACAAAGAAGACACTCGATGCTACAGGTGCCAGGAAAGCTCAAGCTCATCTGAGGGGTTCCTaGAGAAGCTGCGGCAGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: GEKTKKTLDATGARKAQAHLRGS*RSCGSR Trigger: GCGGCTGCCGCAGCTTCTCCAGGAACCCCTCAGATG...AGCTTGAGCTTTCCTGGCACCTGTAGCATCGAGTGTCTTCTTTGTCTTCTCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131252.8 |
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| CDS-3UTR CCA 90 bp | GAGAGGAATGGAGACAAGGGAAGGATCCTATCTGCAGCAGAAGACCGGGGAGAGTGGAAGGGTCACCAATaGGCGCGGAAAGTCCTCACT | + |
|
Preference number: 4 (lower is better) Translates to: ERNGDKGRILSAAEDRGEWKGHQ*ARKVLT Trigger: AGTGAGGACTTTCCGCGCCCATTGGTGACCCTTCCA...CTCTCCCCGGTCTTCTGCTGCAGATAGGATCCTTCCCTTGTCTCCATTCCTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113489.8 ENSMUST00000125516.8 |
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| CDS-3UTR CCA 90 bp | TTTCACAATATGGAGCCAGTGTGTTCCGATTCCGTCCACAAAAATAACTCAGGCAGGCGGTGGGGGAGCTaGAGGCATCCCGAAGGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: FHNMEPVCSDSVHKNNSGRRWGS*RHPEGR Trigger: CCGCCCTTCGGGATGCCTCCAGCTCCCCCACCGCCT...GCCTGAGTTATTTTTGTGGACGGAATCGGAACACACTGGCTCCATATTGTGAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000131252.8 |
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| CDS-3UTR TCA 90 bp | GGAGAGGAATGGAGACAAGGGAAGGATCCTATCTGCAGCAGAAGACCGGGGAGATCGCCTGGCAACATCTaGCCATCTTTACGCCCAACT | + |
|
Preference number: 4 (lower is better) Translates to: GEEWRQGKDPICSRRPGRSPGNI*PSLRPT Trigger: AGTTGGGCGTAAAGATGGTCAGATGTTGCCAGGCGA...TCTCCCCGGTCTTCTGCTGCAGATAGGATCCTTCCCTTGTCTCCATTCCTCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000131252.8 |
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| CDS-3UTR TCA 90 bp | AGGGAAGGAAGGGGCAAAGCAGCAGAACGAAGAACAAGGGACACAAGCCCCAGAGCAGTGACTAGAGCATaGAGAGGCTCATCTTCGCCT | + |
|
Preference number: 4 (lower is better) Translates to: REGRGKAAERRTRDTSPRAVTRA*RGSSSP Trigger: AGGCGAAGATGAGCCTCTTCATGCTCTAGTCACTGC...TCTGGGGCTTGTGTCCCTTGTTCTTCGTTCTGCTGCTTTGCCCCTTCCTTCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000131252.8 |
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| CDS-3UTR TCA 90 bp | TGCCAGGAAAGCTCAAGCTGGCGCCCCACTACCACTGCCCGTTTCCCAAGCGAGGCTTCAGGATGTTTCTaGTCTGTTCTACTGCCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: CQESSSWRPTTTARFPSEASGCF*SVLLPF Trigger: AAAAGGCAGTAGAACAGATCAGAAACATCCTGAAGC...CTCGCTTGGGAAACGGGCAGTGGTAGTGGGGCGCCAGCTTGAGCTTTCCTGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131252.8 |
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| CDS-3UTR GCA 90 bp | CAGAGCATGAAAAAGACTCCAGGCTGGCCTATGGTGGCTTGGGCTGTGCCCTGTCCTCTTCAAGCTTTTTaGGGGTACGGAACTCTCGAG | + |
|
Preference number: 4 (lower is better) Translates to: QSMKKTPGWPMVAWAVPCPLQAF*GYGTLE Trigger: CTCGAGAGTTCCGTACCCGCAAAAAGCTTGAAGAGG...ACAGGGCACAGCCCAAGCCACCATAGGCCAGCCTGGAGTCTTTTTCATGCTCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000113485.9 ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000131252.8 |
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| CDS-3UTR GCA 90 bp | GCCAAGGTCGAAGAGGGTGGCCAGGCCCTGCCCCCACACTGTAAGGTTAAAGACTCTGTAATAAGGGTGTaGCGCTCCTCTTCAAGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: AKVEEGGQALPPHCKVKDSVIRV*RSSSSF Trigger: AAAGCTTGAAGAGGAGCGGCACACCCTTATTACAGA...GTCTTTAACCTTACAGTGTGGGGGCAGGGCCTGGCCACCCTCTTCGACCTTGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131252.8 |
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| CDS-3UTR GCA 90 bp | TGGAGCCAGTGTGTTCCGATTCCGTCCACAAAAATAACTCAGGCTGCTTTGCCGTTGTGCTGCATGGGATaGCCACCATGCCCACCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: WSQCVPIPSTKITQAALPLCCMG*PPCPPV Trigger: GACAGGTGGGCATGGTGGGCATCCCATGCAGCACAA...CGGCAAAGCAGCCTGAGTTATTTTTGTGGACGGAATCGGAACACACTGGCTCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000113487.8 ENSMUST00000124667.2 ENSMUST00000131252.8 |
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| CDS-3UTR GCA 90 bp | CTATCTGCAGCAGAAGACCGGGGAGAGCATCTCCTTGGACGGAGTCTGAAGAAACCATTTGGGTTGTGCTaGATGGGATGCCCACCATGC | + |
|
Preference number: 4 (lower is better) Translates to: LSAAEDRGEHLLGRSLKKPFGLC*MGCPPC Trigger: GCATGGTGGGCATCCCATGCAGCACAACCCAAATGG...TTTCTTCAGACTCCGTCCAAGGAGATGCTCTCCCCGGTCTTCTGCTGCAGATAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000125516.8 ENSMUST00000131252.8 |
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| CDS-3UTR GCA 90 bp | AATAGCCAAAGCCTGTACCTAAACCATTTGCCCCTCTCCCTTTGGGAGGAGAGGGCTGCTGAGGCTGTCTaGCTGGAAGGGTCACCAATG | + |
|
Preference number: 4 (lower is better) Translates to: NSQSLYLNHLPLSLWEERAAEAV*LEGSPM Trigger: CATTGGTGACCCTTCCAGGCAGACAGCCTCAGCAGC...CCTCTCCTCCCAAAGGGAGAGGGGCAAATGGTTTAGGTACAGGCTTTGGCTATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113489.8 ENSMUST00000125516.8 |
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| CDS-3UTR GCA 90 bp | AGCAGAAGACCGGGGAGAGCATCTCCTTGGACGGAGTCTGAAGAAAGGAAAAGAGGCTGCTGCTGCTGCTaGTTTTCCTTGATGCAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: SRRPGRASPWTESEERKRGCCCC*FSLMQA Trigger: CGCCTGCATCAAGGAAAAGCAGCAGCAGCAGCAGCC...TCTTTTCCTTTCTTCAGACTCCGTCCAAGGAGATGCTCTCCCCGGTCTTCTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000125516.8 |
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| CDS-3UTR CCA 90 bp | TTTCACAATATGGAGCCAGTGTGTTCCGATTCCGTCCACAAAAATAACTCAGGCGGAAGTCCAGCGGCGTaGCGTTCGCTCCGGTCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: FHNMEPVCSDSVHKNNSGGSPAA*RSLRSP Trigger: TGGCGACCGGAGCGAACGCCACGCCGCTGGACTTCC...GCCTGAGTTATTTTTGTGGACGGAATCGGAACACACTGGCTCCATATTGTGAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000113485.9 ENSMUST00000113487.8 ENSMUST00000131252.8 |
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| CDS-3UTR CCA 90 bp | AGGATCCTATCTGCAGCAGAAGACCGGGGAGAGCATCTCCTTGGACGGAGTCTGTGCTCCATTGTGTCTTaGTTCCATCGGCTCCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RILSAAEDRGEHLLGRSLCSIVS*FHRLLF Trigger: GAAGAGGAGCCGATGGAACCAAGACACAATGGAGCA...CAGACTCCGTCCAAGGAGATGCTCTCCCCGGTCTTCTGCTGCAGATAGGATCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113485.9 ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000131252.8 |
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| CDS-3UTR CCA 90 bp | ATGGAGACAAGGGAAGGATCCTATCTGCAGCAGAAGACCGGGGAGAGCATCTCCCTCGCTGTTGTAGATTaGTTCAGGGGAAGGGGACCT | + |
|
Preference number: 4 (lower is better) Translates to: METREGSYLQQKTGESISLAVVD*FRGRGP Trigger: AGGTCCCCTTCCCCTGAACCAATCTACAACAGCGAG...GGAGATGCTCTCCCCGGTCTTCTGCTGCAGATAGGATCCTTCCCTTGTCTCCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000113485.9 ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000131252.8 |
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| CDS-3UTR CCA 90 bp | TCGATGCTACAGGTGCCAGGAAAGCTCAAGCTGGCGCCCCACTACCACTGCCCGCTTGTAATCTGCAGGTaGTTTAAAGTCTGGGTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: SMLQVPGKLKLAPHYHCPLVICR*FKVWVE Trigger: CTCAACCCAGACTTTAAACCACCTGCAGATTACAAG...CGGGCAGTGGTAGTGGGGCGCCAGCTTGAGCTTTCCTGGCACCTGTAGCATCGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113485.9 ENSMUST00000131252.8 |
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| CDS-3UTR CCA 90 bp | GGGAAGGATCCTATCTGCAGCAGAAGACCGGGGAGAGCATCTCCTTGGACGGAGAGGCTCATCTTCGCCTaGCAACATCTGACCATCTTT | + |
|
Preference number: 4 (lower is better) Translates to: GKDPICSRRPGRASPWTERLIFA*QHLTIF Trigger: AAAGATGGTCAGATGTTGCCAGGCGAAGATGAGCCT...CTCCGTCCAAGGAGATGCTCTCCCCGGTCTTCTGCTGCAGATAGGATCCTTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000131252.8 |
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| CDS-3UTR CCA 90 bp | GAGCATGAAAAAGACTCCAGGCTGGCCTATGGTGGCTTGGGCTGTGCCCTGTACAGAATTCATCCAGGGTaGGCGGCTCTGAGTTGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: EHEKDSRLAYGGLGCALYRIHPG*AALSCR Trigger: TCTACAACTCAGAGCCGCCCACCCTGGATGAATTCT...GTACAGGGCACAGCCCAAGCCACCATAGGCCAGCCTGGAGTCTTTTTCATGCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000131252.8 |
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| CDS-3UTR CCA 90 bp | AAGCCTGTACCTAAACCATTTGCCCCTCTCCCTTTGGGAGGAGAGGAATGGAGATTGGGTTGTGCTGCATaGGATGCCCACCATGCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: KPVPKPFAPLPLGGEEWRLGCAA*DAHHAH Trigger: GTGGGCATGGTGGGCATCCCATGCAGCACAACCCAA...TCTCCATTCCTCTCCTCCCAAAGGGAGAGGGGCAAATGGTTTAGGTACAGGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000125516.8 ENSMUST00000131252.8 |
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| CDS-3UTR CCA 90 bp | CCGATTCCGTCCACAAAAATAACTCAGGCTGCTTTGCCGAACCATCCTGTCCACTTGGGTTGTGCTGCATaGGATGCCCACCATGCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: PIPSTKITQAALPNHPVHLGCAA*DAHHAH Trigger: GTGGGCATGGTGGGCATCCCATGCAGCACAACCCAA...GTGGACAGGATGGTTCGGCAAAGCAGCCTGAGTTATTTTTGTGGACGGAATCGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000113487.8 ENSMUST00000124667.2 ENSMUST00000131252.8 |
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| CDS-3UTR CCA 90 bp | ATCCTATCTGCAGCAGAAGACCGGGGAGAGCATCTCCTTGGACGGAGTCTGAAGTGGTGGTGGTCCATTTaGGTTGTGCTGCATGGGATG | + |
|
Preference number: 4 (lower is better) Translates to: ILSAAEDRGEHLLGRSLKWWWSI*VVLHGM Trigger: CATCCCATGCAGCACAACCCAAATGGACCACCACCA...CTTCAGACTCCGTCCAAGGAGATGCTCTCCCCGGTCTTCTGCTGCAGATAGGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000125516.8 ENSMUST00000131252.8 |
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| CDS-3UTR CCA 90 bp | GAGAGGAATGGAGACAAGGGAAGGATCCTATCTGCAGCAGAAGACCGGGGAGAGCTGCATCCAAGGTGGTaGTGGTCCATTTGGGTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: ERNGDKGRILSAAEDRGELHPRW*WSIWVV Trigger: CACAACCCAAATGGACCACCACCACCTTGGATGCAG...CTCTCCCCGGTCTTCTGCTGCAGATAGGATCCTTCCCTTGTCTCCATTCCTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000125516.8 ENSMUST00000131252.8 |
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| CDS-3UTR CCA 90 bp | ATCCTATCTGCAGCAGAAGACCGGGGAGAGCATCTCCTTGGACGGAGTCTGAAGTGGCTGCATCCAAGGTaGTGGTGGTCCATTTGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: ILSAAEDRGEHLLGRSLKWLHPR*WWSIWV Trigger: AACCCAAATGGACCACCACCACCTTGGATGCAGCCA...CTTCAGACTCCGTCCAAGGAGATGCTCTCCCCGGTCTTCTGCTGCAGATAGGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000125516.8 ENSMUST00000131252.8 |
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| CDS-3UTR CCA 90 bp | AAGCCTGTACCTAAACCATTTGCCCCTCTCCCTTTGGGAGGAGAGGAATGGAGAGTTCATCGGTGGTGGTaGTGGCTGCATCCAAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: KPVPKPFAPLPLGGEEWRVHRWW*WLHPRW Trigger: CCACCTTGGATGCAGCCACCACCACCACCGATGAAC...TCTCCATTCCTCTCCTCCCAAAGGGAGAGGGGCAAATGGTTTAGGTACAGGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000125516.8 ENSMUST00000131252.8 |
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| CDS-3UTR CCA 90 bp | CCGATTCCGTCCACAAAAATAACTCAGGCTGCTTTGCCGAACCATCCTGTCCACGTTCATCGGTGGTGGTaGTGGCTGCATCCAAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: PIPSTKITQAALPNHPVHVHRWW*WLHPRW Trigger: CCACCTTGGATGCAGCCACCACCACCACCGATGAAC...GTGGACAGGATGGTTCGGCAAAGCAGCCTGAGTTATTTTTGTGGACGGAATCGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000113487.8 ENSMUST00000124667.2 ENSMUST00000131252.8 |
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| CDS-3UTR CCA 90 bp | TGGAGCCAGTGTGTTCCGATTCCGTCCACAAAAATAACTCAGGCTGCTTTGCCGCTGGTTCATCGGTGGTaGTGGTGGCTGCATCCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: WSQCVPIPSTKITQAALPLVHRW*WWLHPR Trigger: CCTTGGATGCAGCCACCACCACCACCGATGAACCAG...CGGCAAAGCAGCCTGAGTTATTTTTGTGGACGGAATCGGAACACACTGGCTCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000113487.8 ENSMUST00000124667.2 ENSMUST00000131252.8 |
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| CDS-3UTR CCA 90 bp | ATATGGAGCCAGTGTGTTCCGATTCCGTCCACAAAAATAACTCAGGCTGCTTTGAAGCCATACTGCTGCTaGGCGGAGGGGGTGGCGGAG | + |
|
Preference number: 4 (lower is better) Translates to: IWSQCVPIPSTKITQAALKPYCC*AEGVAE Trigger: CTCCGCCACCCCCTCCGCCCAGCAGCAGTATGGCTT...CAAAGCAGCCTGAGTTATTTTTGTGGACGGAATCGGAACACACTGGCTCCATAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000113487.8 ENSMUST00000124667.2 ENSMUST00000131252.8 |
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| CDS-3UTR TCA 90 bp | AATGGAGACAAGGGAAGGATCCTATCTGCAGCAGAAGACCGGGGAGAGCATCTCTCGCCTGGCAACATCTaGCCATCTTTACGCCCAACT | + |
|
Preference number: 4 (lower is better) Translates to: NGDKGRILSAAEDRGEHLSPGNI*PSLRPT Trigger: AGTTGGGCGTAAAGATGGTCAGATGTTGCCAGGCGA...GAGATGCTCTCCCCGGTCTTCTGCTGCAGATAGGATCCTTCCCTTGTCTCCATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000131252.8 |
||
| CDS-3UTR TCA 90 bp | ATCTGCAGCAGAAGACCGGGGAGAGCATCTCCTTGGACGGAGTCTGAAGAAAGGCCATCGTATTGGCAGTaGCTAGAGCATGAAGAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: ICSRRPGRASPWTESEERPSYWQ*LEHEEA Trigger: AGCCTCTTCATGCTCTAGTCACTGCCAATACGATGG...CCTTTCTTCAGACTCCGTCCAAGGAGATGCTCTCCCCGGTCTTCTGCTGCAGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000131252.8 |
||
| CDS-3UTR TCA 90 bp | GGAGAGGAATGGAGACAAGGGAAGGATCCTATCTGCAGCAGAAGACCGGGGAGACCATCGTATTGGCAGTaGCTAGAGCATGAAGAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: GEEWRQGKDPICSRRPGRPSYWQ*LEHEEA Trigger: AGCCTCTTCATGCTCTAGTCACTGCCAATACGATGG...TCTCCCCGGTCTTCTGCTGCAGATAGGATCCTTCCCTTGTCTCCATTCCTCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000131252.8 |
||
| CDS-3UTR TCA 90 bp | CTATCTGCAGCAGAAGACCGGGGAGAGCATCTCCTTGGACGGAGTCTGAAGAAAGGGTCGCCAGGCCTCTaGAATTTGCAATCAGAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LSAAEDRGEHLLGRSLKKGSPGL*NLQSEA Trigger: TGCTTCTGATTGCAAATTTCAGAGGCCTGGCGACCC...TTTCTTCAGACTCCGTCCAAGGAGATGCTCTCCCCGGTCTTCTGCTGCAGATAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000131252.8 |
||
| CDS-3UTR TCA 90 bp | GAGAGGAATGGAGACAAGGGAAGGATCCTATCTGCAGCAGAAGACCGGGGAGAGGTAGGGCCGATTCTCTaGAGGACCAGAATTCATCCA | + |
|
Preference number: 4 (lower is better) Translates to: ERNGDKGRILSAAEDRGEVGPIL*RTRIHP Trigger: TGGATGAATTCTGGTCCTTCAGAGAATCGGCCCTAC...CTCTCCCCGGTCTTCTGCTGCAGATAGGATCCTTCCCTTGTCTCCATTCCTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000125516.8 ENSMUST00000131252.8 |
||
| CDS-3UTR TCA 90 bp | GAGGAATGGAGACAAGGGAAGGATCCTATCTGCAGCAGAAGACCGGGGAGAGCAGTAGGGCCGATTCTCTaGAGGACCAGAATTCATCCA | + |
|
Preference number: 4 (lower is better) Translates to: EEWRQGKDPICSRRPGRAVGPIL*RTRIHP Trigger: TGGATGAATTCTGGTCCTTCAGAGAATCGGCCCTAC...TGCTCTCCCCGGTCTTCTGCTGCAGATAGGATCCTTCCCTTGTCTCCATTCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000125516.8 ENSMUST00000131252.8 |
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| CDS-3UTR TCA 90 bp | GAGGAGAGGAATGGAGACAAGGGAAGGATCCTATCTGCAGCAGAAGACCGGGGAGTAGGGCCGATTCTCTaGAGGACCAGAATTCATCCA | + |
|
Preference number: 4 (lower is better) Translates to: EERNGDKGRILSAAEDRGVGPIL*RTRIHP Trigger: TGGATGAATTCTGGTCCTTCAGAGAATCGGCCCTAC...TCCCCGGTCTTCTGCTGCAGATAGGATCCTTCCCTTGTCTCCATTCCTCTCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000125516.8 ENSMUST00000131252.8 |
||
| CDS-3UTR TCA 90 bp | AATAGCCAAAGCCTGTACCTAAACCATTTGCCCCTCTCCCTTTGGGAGGAGAGGGTACTTCCCAGGTACTaGTCCATTGGAGGAGGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: NSQSLYLNHLPLSLWEERVLPRY*SIGGGP Trigger: TGGCCCTCCTCCAATGGATCAGTACCTGGGAAGTAC...CCTCTCCTCCCAAAGGGAGAGGGGCAAATGGTTTAGGTACAGGCTTTGGCTATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000113487.8 ENSMUST00000125516.8 ENSMUST00000131252.8 |
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| CDS-3UTR GCA 90 bp | ATCCTATCTGCAGCAGAAGACCGGGGAGAGCATCTCCTTGGACGGAGTCTGAAGCCTCTTCAAGCTTTTTaGGGGTACGGAACTCTCGAG | + |
|
Preference number: 4 (lower is better) Translates to: ILSAAEDRGEHLLGRSLKPLQAF*GYGTLE Trigger: CTCGAGAGTTCCGTACCCGCAAAAAGCTTGAAGAGG...CTTCAGACTCCGTCCAAGGAGATGCTCTCCCCGGTCTTCTGCTGCAGATAGGAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000113485.9 ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000131252.8 |
||
| CDS-3UTR GCA 90 bp | GAGGAATGGAGACAAGGGAAGGATCCTATCTGCAGCAGAAGACCGGGGAGAGCACATCTTCCCGTAGAGTaGCATTCAAGCGAGCCAACT | + |
|
Preference number: 4 (lower is better) Translates to: EEWRQGKDPICSRRPGRAHLPVE*HSSEPT Trigger: AGTTGGCTCGCTTGAATGGCACTCTACGGGAAGATG...TGCTCTCCCCGGTCTTCTGCTGCAGATAGGATCCTTCCCTTGTCTCCATTCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000131252.8 |
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| CDS-3UTR GCA 90 bp | GCAGAAGACCGGGGAGAGCATCTCCTTGGACGGAGTCTGAAGAAAGGAAAAGATCGCGTCTCTGAGCTCTaGCAGGGCCTTAAGATCCTA | + |
|
Preference number: 4 (lower is better) Translates to: AEDRGEHLLGRSLKKGKDRVSEL*QGLKIL Trigger: TAGGATCTTAAGGCCCTGGCAGAGCTCAGAGACGCG...ATCTTTTCCTTTCTTCAGACTCCGTCCAAGGAGATGCTCTCCCCGGTCTTCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000131252.8 |
||
| CDS-3UTR GCA 90 bp | ATTAATAGCCAAAGCCTGTACCTAAACCATTTGCCCCTCTCCCTTTGGGAGGAGAGCAGCAGGTCTTGGTaGACTAGCCAGGGGCGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: INSQSLYLNHLPLSLWEESSRSW*TSQGRG Trigger: ACCACGCCCCTGGCTAGTGCACCAAGACCTGCTGCT...CTCCTCCCAAAGGGAGAGGGGCAAATGGTTTAGGTACAGGCTTTGGCTATTAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000125516.8 ENSMUST00000131252.8 |
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| CDS-3UTR GCA 90 bp | AGCAGAAGACCGGGGAGAGCATCTCCTTGGACGGAGTCTGAAGAAAGGAAAAGAGACCACCTCCATGCATaGCATGGTAGGGCCGATTCT | + |
|
Preference number: 4 (lower is better) Translates to: SRRPGRASPWTESEERKRDHLHA*HGRADS Trigger: AGAATCGGCCCTACCATGGCATGCATGGAGGTGGTC...TCTTTTCCTTTCTTCAGACTCCGTCCAAGGAGATGCTCTCCCCGGTCTTCTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000125516.8 ENSMUST00000131252.8 |
||
| CDS-3UTR GCA 90 bp | CCGATTCCGTCCACAAAAATAACTCAGGCTGCTTTGCCGAACCATCCTGTCCACGACCACCTCCATGCATaGCATGGTAGGGCCGATTCT | + |
|
Preference number: 4 (lower is better) Translates to: PIPSTKITQAALPNHPVHDHLHA*HGRADS Trigger: AGAATCGGCCCTACCATGGCATGCATGGAGGTGGTC...GTGGACAGGATGGTTCGGCAAAGCAGCCTGAGTTATTTTTGTGGACGGAATCGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000113487.8 ENSMUST00000124667.2 ENSMUST00000131252.8 |
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| CDS-3UTR GCA 90 bp | GTTCCGATTCCGTCCACAAAAATAACTCAGGCTGCTTTGCCGAACCATCCTGTCTTGTGCTGCATGGGATaGCCACCATGCCCACCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: VPIPSTKITQAALPNHPVLCCMG*PPCPPV Trigger: GACAGGTGGGCATGGTGGGCATCCCATGCAGCACAA...GACAGGATGGTTCGGCAAAGCAGCCTGAGTTATTTTTGTGGACGGAATCGGAAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000113487.8 ENSMUST00000124667.2 ENSMUST00000131252.8 |
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| CDS-3UTR GCA 90 bp | GCAGAAGACCGGGGAGAGCATCTCCTTGGACGGAGTCTGAAGAAAGGAAAAGATCCATTTGGGTTGTGCTaGATGGGATGCCCACCATGC | + |
|
Preference number: 4 (lower is better) Translates to: AEDRGEHLLGRSLKKGKDPFGLC*MGCPPC Trigger: GCATGGTGGGCATCCCATGCAGCACAACCCAAATGG...ATCTTTTCCTTTCTTCAGACTCCGTCCAAGGAGATGCTCTCCCCGGTCTTCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000125516.8 ENSMUST00000131252.8 |
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| CDS-3UTR GCA 90 bp | GCAGAAGACCGGGGAGAGCATCTCCTTGGACGGAGTCTGAAGAAAGGAAAAGATGGTCCATTTGGGTTGTaGTGCATGGGATGCCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: AEDRGEHLLGRSLKKGKDGPFGL*CMGCPP Trigger: TGGTGGGCATCCCATGCAGCACAACCCAAATGGACC...ATCTTTTCCTTTCTTCAGACTCCGTCCAAGGAGATGCTCTCCCCGGTCTTCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000125516.8 ENSMUST00000131252.8 |
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| CDS-3UTR GCA 90 bp | GCAGAAGACCGGGGAGAGCATCTCCTTGGACGGAGTCTGAAGAAAGGAAAAGATGGAGGCTGCTGCTGCTaGTGCTTTTCCTTGATGCAG | + |
|
Preference number: 4 (lower is better) Translates to: AEDRGEHLLGRSLKKGKDGGCCC*CFSLMQ Trigger: CTGCATCAAGGAAAAGCAGCAGCAGCAGCAGCCTCC...ATCTTTTCCTTTCTTCAGACTCCGTCCAAGGAGATGCTCTCCCCGGTCTTCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000125516.8 |
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| CDS-3UTR CCA 90 bp | AAGGAAGGGGCAAAGCAGCAGAACGAAGAACAAGGGACACAAGCCCCAGACACTCTCGCTGTTGTAGATTaGTTCAGGGGAAGGGGACCT | + |
|
Preference number: 4 (lower is better) Translates to: KEGAKQQNEEQGTQAPDTLAVVD*FRGRGP Trigger: AGGTCCCCTTCCCCTGAACCAATCTACAACAGCGAG...AGTGTCTGGGGCTTGTGTCCCTTGTTCTTCGTTCTGCTGCTTTGCCCCTTCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000113485.9 ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000131252.8 |
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| CDS-3UTR CCA 90 bp | CCAAAGCCTGTACCTAAACCATTTGCCCCTCTCCCTTTGGGAGGAGAGGAATGGGCTCACACGTGTTGCTaGAGGCTTGTAATCTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: PKPVPKPFAPLPLGGEEWAHTCC*RLVICR Trigger: CCTGCAGATTACAAGCCTCCAGCAACACGTGTGAGC...CCATTCCTCTCCTCCCAAAGGGAGAGGGGCAAATGGTTTAGGTACAGGCTTTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000131252.8 |
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| CDS-3UTR CCA 90 bp | AAGGAAGGGGCAAAGCAGCAGAACGAAGAACAAGGGACACAAGCCCCAGACACTGCTCACACGTGTTGCTaGAGGCTTGTAATCTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: KEGAKQQNEEQGTQAPDTAHTCC*RLVICR Trigger: CCTGCAGATTACAAGCCTCCAGCAACACGTGTGAGC...AGTGTCTGGGGCTTGTGTCCCTTGTTCTTCGTTCTGCTGCTTTGCCCCTTCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000131252.8 |
||
| CDS-3UTR CCA 90 bp | GGAAGGAAGGGGCAAAGCAGCAGAACGAAGAACAAGGGACACAAGCCCCAGACAATCGTTCTGGTCCTCTaGGGTCTCAATACCCTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: GRKGQSSRTKNKGHKPQTIVLVL*GLNTLL Trigger: AAGCAGGGTATTGAGACCCCAGAGGACCAGAACGAT...TGTCTGGGGCTTGTGTCCCTTGTTCTTCGTTCTGCTGCTTTGCCCCTTCCTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000131252.8 |
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| CDS-3UTR CCA 90 bp | AGGATCCTATCTGCAGCAGAAGACCGGGGAGAGCATCTCCTTGGACGGAGTCTGTTCCGTAGATCGTTCTaGTCCTCTGGGGTCTCAATA | + |
|
Preference number: 4 (lower is better) Translates to: RILSAAEDRGEHLLGRSLFRRSF*SSGVSI Trigger: TATTGAGACCCCAGAGGACCAGAACGATCTACGGAA...CAGACTCCGTCCAAGGAGATGCTCTCCCCGGTCTTCTGCTGCAGATAGGATCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000131252.8 |
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| CDS-3UTR CCA 90 bp | ATTAATAGCCAAAGCCTGTACCTAAACCATTTGCCCCTCTCCCTTTGGGAGGAGAGGAGCAGCAGGTCTTaGTGCACTAGCCAGGGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: INSQSLYLNHLPLSLWEERSSRS*CTSQGR Trigger: ACGCCCCTGGCTAGTGCACCAAGACCTGCTGCTCCT...CTCCTCCCAAAGGGAGAGGGGCAAATGGTTTAGGTACAGGCTTTGGCTATTAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000125516.8 ENSMUST00000131252.8 |
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| CDS-3UTR CCA 90 bp | AATGGAGACAAGGGAAGGATCCTATCTGCAGCAGAAGACCGGGGAGAGCATCTCTGGTGGTGGTCCATTTaGGTTGTGCTGCATGGGATG | + |
|
Preference number: 4 (lower is better) Translates to: NGDKGRILSAAEDRGEHLWWWSI*VVLHGM Trigger: CATCCCATGCAGCACAACCCAAATGGACCACCACCA...GAGATGCTCTCCCCGGTCTTCTGCTGCAGATAGGATCCTTCCCTTGTCTCCATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000125516.8 ENSMUST00000131252.8 |
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| CDS-3UTR CCA 90 bp | ATGGAGCCAGTGTGTTCCGATTCCGTCCACAAAAATAACTCAGGCTGCTTTGCCCTGGTTCATCGGTGGTaGTGGTGGCTGCATCCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: MEPVCSDSVHKNNSGCFALVHRW*WWLHPR Trigger: CCTTGGATGCAGCCACCACCACCACCGATGAACCAG...GGCAAAGCAGCCTGAGTTATTTTTGTGGACGGAATCGGAACACACTGGCTCCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000113487.8 ENSMUST00000124667.2 ENSMUST00000131252.8 |
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| CDS-3UTR CCA 90 bp | CAGTGTGTTCCGATTCCGTCCACAAAAATAACTCAGGCTGCTTTGCCGAACCATGCCCTGGTTCATCGGTaGTGGTGGTGGCTGCATCCA | + |
|
Preference number: 4 (lower is better) Translates to: QCVPIPSTKITQAALPNHALVHR*WWWLHP Trigger: TGGATGCAGCCACCACCACCACCGATGAACCAGGGC...ATGGTTCGGCAAAGCAGCCTGAGTTATTTTTGTGGACGGAATCGGAACACACTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000113487.8 ENSMUST00000124667.2 ENSMUST00000131252.8 |
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| CDS-3UTR CCA 90 bp | GAGCCAGTGTGTTCCGATTCCGTCCACAAAAATAACTCAGGCTGCTTTGCCGAACAGGTACTGATCCATTaGAGGAGGGCCATGGTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: EPVCSDSVHKNNSGCFAEQVLIH*RRAMVP Trigger: GGGCACCATGGCCCTCCTCCAATGGATCAGTACCTG...TTCGGCAAAGCAGCCTGAGTTATTTTTGTGGACGGAATCGGAACACACTGGCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000113487.8 ENSMUST00000131252.8 |
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| CDS-3UTR CCA 90 bp | GTTCCGATTCCGTCCACAAAAATAACTCAGGCTGCTTTGCCGAACCATCCTGTCATGGCAAGGGGGTGCTaGAAGCCATACTGCTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: VPIPSTKITQAALPNHPVMARGC*KPYCCW Trigger: CCAGCAGCAGTATGGCTTCCAGCACCCCCTTGCCAT...GACAGGATGGTTCGGCAAAGCAGCCTGAGTTATTTTTGTGGACGGAATCGGAAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000113487.8 ENSMUST00000124667.2 ENSMUST00000131252.8 |
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| CDS-3UTR CCA 90 bp | GTTCCGATTCCGTCCACAAAAATAACTCAGGCTGCTTTGCCGAACCATCCTGTCGGATCTTTGCTGCCATaGCAAGGGGGTGCTGGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: VPIPSTKITQAALPNHPVGSLLP*QGGAGS Trigger: GCTTCCAGCACCCCCTTGCCATGGCAGCAAAGATCC...GACAGGATGGTTCGGCAAAGCAGCCTGAGTTATTTTTGTGGACGGAATCGGAAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000113487.8 ENSMUST00000124667.2 |
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| CDS-3UTR CCA 90 bp | AAGCCTGTACCTAAACCATTTGCCCCTCTCCCTTTGGGAGGAGAGGAATGGAGATGGAAGGGTCACCAATaGGCGCGGAAAGTCCTCACT | + |
|
Preference number: 4 (lower is better) Translates to: KPVPKPFAPLPLGGEEWRWKGHQ*ARKVLT Trigger: AGTGAGGACTTTCCGCGCCCATTGGTGACCCTTCCA...TCTCCATTCCTCTCCTCCCAAAGGGAGAGGGGCAAATGGTTTAGGTACAGGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113489.8 ENSMUST00000125516.8 |
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| CDS-3UTR TCA 90 bp | GCAGAAGACCGGGGAGAGCATCTCCTTGGACGGAGTCTGAAGAAAGGAAAAGATGGGTCGCCAGGCCTCTaGAATTTGCAATCAGAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: AEDRGEHLLGRSLKKGKDGSPGL*NLQSEA Trigger: TGCTTCTGATTGCAAATTTCAGAGGCCTGGCGACCC...ATCTTTTCCTTTCTTCAGACTCCGTCCAAGGAGATGCTCTCCCCGGTCTTCTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000131252.8 |
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| CDS-3UTR GCA 90 bp | GGTGACCAGAGCATGAAAAAGACTCCAGGCTGGCCTATGGTGGCTTGGGCTGTGGGAATCACTGTCTTCTaGTCCATTGTGTCTTGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: GDQSMKKTPGWPMVAWAVGITVF*SIVSWF Trigger: GAACCAAGACACAATGGAGCAGAAGACAGTGATTCC...CACAGCCCAAGCCACCATAGGCCAGCCTGGAGTCTTTTTCATGCTCTGGTCACC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000113485.9 ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000131252.8 |
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| CDS-3UTR GCA 90 bp | ACAATCACATGCGTGCATCCCAATGTCTGGCTCCATATGGTGAGGTTCGGCGTGCCTCTTCAAGCTTTTTaGGGGTACGGAACTCTCGAG | + |
|
Preference number: 4 (lower is better) Translates to: TITCVHPNVWLHMVRFGVPLQAF*GYGTLE Trigger: CTCGAGAGTTCCGTACCCGCAAAAAGCTTGAAGAGG...CACGCCGAACCTCACCATATGGAGCCAGACATTGGGATGCACGCATGTGATTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000113485.9 ENSMUST00000131252.8 |
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| CDS-3UTR GCA 90 bp | AGGATCCTATCTGCAGCAGAAGACCGGGGAGAGCATCTCCTTGGACGGAGTCTGTCTGTAATAAGGGTGTaGCGCTCCTCTTCAAGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: RILSAAEDRGEHLLGRSLSVIRV*RSSSSF Trigger: AAAGCTTGAAGAGGAGCGGCACACCCTTATTACAGA...CAGACTCCGTCCAAGGAGATGCTCTCCCCGGTCTTCTGCTGCAGATAGGATCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113485.9 ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000131252.8 |
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| CDS-3UTR GCA 90 bp | AGGAAGGGGCAAAGCAGCAGAACGAAGAACAAGGGACACAAGCCCCAGACACTGGCCAACTCTCGAAGCTaGATTTTCCGTAGATCGTTC | + |
|
Preference number: 4 (lower is better) Translates to: RKGQSSRTKNKGHKPQTLANSRS*IFRRSF Trigger: GAACGATCTACGGAAAATGCAGCTTCGAGAGTTGGC...CAGTGTCTGGGGCTTGTGTCCCTTGTTCTTCGTTCTGCTGCTTTGCCCCTTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000131252.8 |
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| CDS-3UTR GCA 90 bp | GAGCCAGTGTGTTCCGATTCCGTCCACAAAAATAACTCAGGCTGCTTTGCCGAACCATTTGGGTTGTGCTaGATGGGATGCCCACCATGC | + |
|
Preference number: 4 (lower is better) Translates to: EPVCSDSVHKNNSGCFAEPFGLC*MGCPPC Trigger: GCATGGTGGGCATCCCATGCAGCACAACCCAAATGG...TTCGGCAAAGCAGCCTGAGTTATTTTTGTGGACGGAATCGGAACACACTGGCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000113487.8 ENSMUST00000124667.2 ENSMUST00000131252.8 |
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| CDS-3UTR GCA 90 bp | CCAGTGTGTTCCGATTCCGTCCACAAAAATAACTCAGGCTGCTTTGCCGAACCAGGTCCATTTGGGTTGTaGTGCATGGGATGCCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: PVCSDSVHKNNSGCFAEPGPFGL*CMGCPP Trigger: TGGTGGGCATCCCATGCAGCACAACCCAAATGGACC...TGGTTCGGCAAAGCAGCCTGAGTTATTTTTGTGGACGGAATCGGAACACACTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000113487.8 ENSMUST00000124667.2 ENSMUST00000131252.8 |
||
| CDS-3UTR GCA 90 bp | ATGGAGCCAGTGTGTTCCGATTCCGTCCACAAAAATAACTCAGGCTGCTTTGCCGGTCCATTTGGGTTGTaGTGCATGGGATGCCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: MEPVCSDSVHKNNSGCFAGPFGL*CMGCPP Trigger: TGGTGGGCATCCCATGCAGCACAACCCAAATGGACC...GGCAAAGCAGCCTGAGTTATTTTTGTGGACGGAATCGGAACACACTGGCTCCAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000113487.8 ENSMUST00000124667.2 ENSMUST00000131252.8 |
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| CDS-3UTR GCA 90 bp | ATATGGAGCCAGTGTGTTCCGATTCCGTCCACAAAAATAACTCAGGCTGCTTTGGCCATGGCAAGGGGGTaGTGGAAGCCATACTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: IWSQCVPIPSTKITQAALAMARG*WKPYCC Trigger: GCAGCAGTATGGCTTCCAGCACCCCCTTGCCATGGC...CAAAGCAGCCTGAGTTATTTTTGTGGACGGAATCGGAACACACTGGCTCCATAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000113487.8 ENSMUST00000124667.2 ENSMUST00000131252.8 |
||
| CDS-3UTR CCA 90 bp | AATGGAGACAAGGGAAGGATCCTATCTGCAGCAGAAGACCGGGGAGAGCATCTCTGCTCCATTGTGTCTTaGTTCCATCGGCTCCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: NGDKGRILSAAEDRGEHLCSIVS*FHRLLF Trigger: GAAGAGGAGCCGATGGAACCAAGACACAATGGAGCA...GAGATGCTCTCCCCGGTCTTCTGCTGCAGATAGGATCCTTCCCTTGTCTCCATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113485.9 ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000131252.8 |
||
| CDS-3UTR CCA 90 bp | CTATCTGCAGCAGAAGACCGGGGAGAGCATCTCCTTGGACGGAGTCTGAAGAAAAGAATTCATCCAGGGTaGGCGGCTCTGAGTTGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: LSAAEDRGEHLLGRSLKKRIHPG*AALSCR Trigger: TCTACAACTCAGAGCCGCCCACCCTGGATGAATTCT...TTTCTTCAGACTCCGTCCAAGGAGATGCTCTCCCCGGTCTTCTGCTGCAGATAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000125516.8 ENSMUST00000131252.8 |
||
| CDS-3UTR CCA 90 bp | TTAAGTCGGGCAGCAGCTAGGAGACACAAATCCTATCTAGAGCTCATCAATGTGCATCGGTGGTGGTGGTaGCTGCATCCAAGGTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LSRAAARRHKSYLELINVHRWWW*LHPRWW Trigger: CCACCACCTTGGATGCAGCCACCACCACCACCGATG...CACATTGATGAGCTCTAGATAGGATTTGTGTCTCCTAGCTGCTGCCCGACTTAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131252.8 |
||
| CDS-3UTR CCA 90 bp | TGTGTTCCGATTCCGTCCACAAAAATAACTCAGGCTGCTTTGCCGAACCATCCTGGATCTTTGCTGCCATaGCAAGGGGGTGCTGGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: CVPIPSTKITQAALPNHPGSLLP*QGGAGS Trigger: GCTTCCAGCACCCCCTTGCCATGGCAGCAAAGATCC...AGGATGGTTCGGCAAAGCAGCCTGAGTTATTTTTGTGGACGGAATCGGAACACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000113487.8 ENSMUST00000124667.2 |
||
| CDS-3UTR TCA 90 bp | GGTGACCAGAGCATGAAAAAGACTCCAGGCTGGCCTATGGTGGCTTGGGCTGTGGCTTCAGGATGTTTCTaGTCTGTTCTACTGCCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: GDQSMKKTPGWPMVAWAVASGCF*SVLLPF Trigger: AAAAGGCAGTAGAACAGATCAGAAACATCCTGAAGC...CACAGCCCAAGCCACCATAGGCCAGCCTGGAGTCTTTTTCATGCTCTGGTCACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000131252.8 |
||
| CDS-3UTR TCA 90 bp | CCGATTCCGTCCACAAAAATAACTCAGGCTGCTTTGCCGAACCATCCTGTCCACGTAGGGCCGATTCTCTaGAGGACCAGAATTCATCCA | + |
|
Preference number: 4 (lower is better) Translates to: PIPSTKITQAALPNHPVHVGPIL*RTRIHP Trigger: TGGATGAATTCTGGTCCTTCAGAGAATCGGCCCTAC...GTGGACAGGATGGTTCGGCAAAGCAGCCTGAGTTATTTTTGTGGACGGAATCGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000113487.8 ENSMUST00000124667.2 ENSMUST00000131252.8 |
||
| CDS-3UTR GCA 90 bp | GGAGAGGAATGGAGACAAGGGAAGGATCCTATCTGCAGCAGAAGACCGGGGAGAGGAATCACTGTCTTCTaGTCCATTGTGTCTTGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: GEEWRQGKDPICSRRPGRGITVF*SIVSWF Trigger: GAACCAAGACACAATGGAGCAGAAGACAGTGATTCC...TCTCCCCGGTCTTCTGCTGCAGATAGGATCCTTCCCTTGTCTCCATTCCTCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113485.9 ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000131252.8 |
||
| CDS-3UTR GCA 90 bp | CTGTGCCCTGTACTGCTGGCAGGAGTGCAGGAAGATGTGAATCCCACTGCCAAAGGAATCACTGTCTTCTaGTCCATTGTGTCTTGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: LCPVLLAGVQEDVNPTAKGITVF*SIVSWF Trigger: GAACCAAGACACAATGGAGCAGAAGACAGTGATTCC...TTTGGCAGTGGGATTCACATCTTCCTGCACTCCTGCCAGCAGTACAGGGCACAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000113485.9 ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000131252.8 |
||
| CDS-3UTR GCA 90 bp | TGTGTTCCGATTCCGTCCACAAAAATAACTCAGGCTGCTTTGCCGAACCATCCTCCATTTGGGTTGTGCTaGATGGGATGCCCACCATGC | + |
|
Preference number: 4 (lower is better) Translates to: CVPIPSTKITQAALPNHPPFGLC*MGCPPC Trigger: GCATGGTGGGCATCCCATGCAGCACAACCCAAATGG...AGGATGGTTCGGCAAAGCAGCCTGAGTTATTTTTGTGGACGGAATCGGAACACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000113487.8 ENSMUST00000124667.2 ENSMUST00000131252.8 |
||
| CDS-3UTR GCA 90 bp | AATATGGAGCCAGTGTGTTCCGATTCCGTCCACAAAAATAACTCAGGCTGCTTTGGAGGCTGCTGCTGCTaGTGCTGCCATGGAGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: NMEPVCSDSVHKNNSGCFGGCCC*CCHGGR Trigger: TCTTCCTCCATGGCAGCAGCAGCAGCAGCAGCCTCC...AAAGCAGCCTGAGTTATTTTTGTGGACGGAATCGGAACACACTGGCTCCATATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000113487.8 ENSMUST00000124667.2 ENSMUST00000131252.8 |
||
| CDS-3UTR GCA 90 bp | TTTCACAATATGGAGCCAGTGTGTTCCGATTCCGTCCACAAAAATAACTCAGGCGCCATGGCAAGGGGGTaGTGGAAGCCATACTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: FHNMEPVCSDSVHKNNSGAMARG*WKPYCC Trigger: GCAGCAGTATGGCTTCCAGCACCCCCTTGCCATGGC...GCCTGAGTTATTTTTGTGGACGGAATCGGAACACACTGGCTCCATATTGTGAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000113487.8 ENSMUST00000124667.2 ENSMUST00000131252.8 |
||
| CDS-3UTR CCA 90 bp | CAGTGTGTTCCGATTCCGTCCACAAAAATAACTCAGGCTGCTTTGCCGAACCATCTTCCTCTTCTTACTTaGGAAGTCCAGCGGCGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: QCVPIPSTKITQAALPNHLPLLT*EVQRRG Trigger: GCCACGCCGCTGGACTTCCCAAGTAAGAAGAGGAAG...ATGGTTCGGCAAAGCAGCCTGAGTTATTTTTGTGGACGGAATCGGAACACACTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000113485.9 ENSMUST00000113487.8 ENSMUST00000131252.8 |
||
| CDS-3UTR CCA 90 bp | CTATCTGCAGCAGAAGACCGGGGAGAGCATCTCCTTGGACGGAGTCTGAAGAAAAACTGTAGGCATGCCTaGAATCACTGTCTTCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LSAAEDRGEHLLGRSLKKNCRHA*NHCLLL Trigger: GAGCAGAAGACAGTGATTCCAGGCATGCCTACAGTT...TTTCTTCAGACTCCGTCCAAGGAGATGCTCTCCCCGGTCTTCTGCTGCAGATAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000113485.9 ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000131252.8 |
||
| CDS-3UTR CCA 90 bp | TGCAGCAGAAGACCGGGGAGAGCATCTCCTTGGACGGAGTCTGAAGAAAGGAAAAGGCTCATCTTCGCCTaGCAACATCTGACCATCTTT | + |
|
Preference number: 4 (lower is better) Translates to: CSRRPGRASPWTESEERKRLIFA*QHLTIF Trigger: AAAGATGGTCAGATGTTGCCAGGCGAAGATGAGCCT...TTTCCTTTCTTCAGACTCCGTCCAAGGAGATGCTCTCCCCGGTCTTCTGCTGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000131252.8 |
||
| CDS-3UTR CCA 90 bp | TTCACAATATGGAGCCAGTGTGTTCCGATTCCGTCCACAAAAATAACTCAGGCTAGGAGCAGCAGGTCTTaGTGCACTAGCCAGGGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: FTIWSQCVPIPSTKITQARSSRS*CTSQGR Trigger: ACGCCCCTGGCTAGTGCACCAAGACCTGCTGCTCCT...AGCCTGAGTTATTTTTGTGGACGGAATCGGAACACACTGGCTCCATATTGTGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000113487.8 ENSMUST00000131252.8 |
||
| CDS-3UTR CCA 90 bp | AATATGGAGCCAGTGTGTTCCGATTCCGTCCACAAAAATAACTCAGGCTGCTTTCATGAGAGACGGTGGTaGTGGGTTGCTGGCAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: NMEPVCSDSVHKNNSGCFHERRW*WVAGRS Trigger: GCTCCTGCCAGCAACCCACCACCACCGTCTCTCATG...AAAGCAGCCTGAGTTATTTTTGTGGACGGAATCGGAACACACTGGCTCCATATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000113487.8 ENSMUST00000131252.8 |
||
| CDS-3UTR CCA 90 bp | GTTCCGATTCCGTCCACAAAAATAACTCAGGCTGCTTTGCCGAACCATCCTGTCTGGTGGTGGTCCATTTaGGTTGTGCTGCATGGGATG | + |
|
Preference number: 4 (lower is better) Translates to: VPIPSTKITQAALPNHPVWWWSI*VVLHGM Trigger: CATCCCATGCAGCACAACCCAAATGGACCACCACCA...GACAGGATGGTTCGGCAAAGCAGCCTGAGTTATTTTTGTGGACGGAATCGGAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000113487.8 ENSMUST00000124667.2 ENSMUST00000131252.8 |
||
| CDS-3UTR CCA 90 bp | ATGGAGCCAGTGTGTTCCGATTCCGTCCACAAAAATAACTCAGGCTGCTTTGCCTGGTGGTGGTCCATTTaGGTTGTGCTGCATGGGATG | + |
|
Preference number: 4 (lower is better) Translates to: MEPVCSDSVHKNNSGCFAWWWSI*VVLHGM Trigger: CATCCCATGCAGCACAACCCAAATGGACCACCACCA...GGCAAAGCAGCCTGAGTTATTTTTGTGGACGGAATCGGAACACACTGGCTCCAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000113487.8 ENSMUST00000124667.2 ENSMUST00000131252.8 |
||
| CDS-3UTR CCA 90 bp | GTTCCGATTCCGTCCACAAAAATAACTCAGGCTGCTTTGCCGAACCATCCTGTCCTGCATCCAAGGTGGTaGTGGTCCATTTGGGTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: VPIPSTKITQAALPNHPVLHPRW*WSIWVV Trigger: CACAACCCAAATGGACCACCACCACCTTGGATGCAG...GACAGGATGGTTCGGCAAAGCAGCCTGAGTTATTTTTGTGGACGGAATCGGAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000113487.8 ENSMUST00000124667.2 ENSMUST00000131252.8 |
||
| CDS-3UTR CCA 90 bp | CCAGTGTGTTCCGATTCCGTCCACAAAAATAACTCAGGCTGCTTTGCCGAACCATGGCTGCATCCAAGGTaGTGGTGGTCCATTTGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: PVCSDSVHKNNSGCFAEPWLHPR*WWSIWV Trigger: AACCCAAATGGACCACCACCACCTTGGATGCAGCCA...TGGTTCGGCAAAGCAGCCTGAGTTATTTTTGTGGACGGAATCGGAACACACTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000113487.8 ENSMUST00000124667.2 ENSMUST00000131252.8 |
||
| CDS-3UTR CCA 90 bp | GGAGAGAAGACAAAGAAGACACTCGATGCTACAGGTGCCAGGAAAGCTCAAGCTTGGCTGCATCCAAGGTaGTGGTGGTCCATTTGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: GEKTKKTLDATGARKAQAWLHPR*WWSIWV Trigger: AACCCAAATGGACCACCACCACCTTGGATGCAGCCA...AGCTTGAGCTTTCCTGGCACCTGTAGCATCGAGTGTCTTCTTTGTCTTCTCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131252.8 |
||
| CDS-3UTR CCA 90 bp | AATATGGAGCCAGTGTGTTCCGATTCCGTCCACAAAAATAACTCAGGCTGCTTTCATCGGTGGTGGTGGTaGCTGCATCCAAGGTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: NMEPVCSDSVHKNNSGCFHRWWW*LHPRWW Trigger: CCACCACCTTGGATGCAGCCACCACCACCACCGATG...AAAGCAGCCTGAGTTATTTTTGTGGACGGAATCGGAACACACTGGCTCCATATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000113487.8 ENSMUST00000124667.2 ENSMUST00000131252.8 |
||
| CDS-3UTR TCA 90 bp | ATTAATAGCCAAAGCCTGTACCTAAACCATTTGCCCCTCTCCCTTTGGGAGGAGGCAGTGACTAGAGCATaGAGAGGCTCATCTTCGCCT | + |
|
Preference number: 4 (lower is better) Translates to: INSQSLYLNHLPLSLWEEAVTRA*RGSSSP Trigger: AGGCGAAGATGAGCCTCTTCATGCTCTAGTCACTGC...CTCCTCCCAAAGGGAGAGGGGCAAATGGTTTAGGTACAGGCTTTGGCTATTAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000131252.8 |
||
| CDS-3UTR GCA 90 bp | AAGGAAGGGGCAAAGCAGCAGAACGAAGAACAAGGGACACAAGCCCCAGACACTGGAATCACTGTCTTCTaGTCCATTGTGTCTTGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: KEGAKQQNEEQGTQAPDTGITVF*SIVSWF Trigger: GAACCAAGACACAATGGAGCAGAAGACAGTGATTCC...AGTGTCTGGGGCTTGTGTCCCTTGTTCTTCGTTCTGCTGCTTTGCCCCTTCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000113485.9 ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000131252.8 |
||
| CDS-3UTR GCA 90 bp | AAGGAAGGGGCAAAGCAGCAGAACGAAGAACAAGGGACACAAGCCCCAGACACTTCTGTAATAAGGGTGTaGCGCTCCTCTTCAAGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: KEGAKQQNEEQGTQAPDTSVIRV*RSSSSF Trigger: AAAGCTTGAAGAGGAGCGGCACACCCTTATTACAGA...AGTGTCTGGGGCTTGTGTCCCTTGTTCTTCGTTCTGCTGCTTTGCCCCTTCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000113485.9 ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000131252.8 |
||
| CDS-3UTR GCA 90 bp | AATGGAGACAAGGGAAGGATCCTATCTGCAGCAGAAGACCGGGGAGAGCATCTCTCTGTAATAAGGGTGTaGCGCTCCTCTTCAAGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: NGDKGRILSAAEDRGEHLSVIRV*RSSSSF Trigger: AAAGCTTGAAGAGGAGCGGCACACCCTTATTACAGA...GAGATGCTCTCCCCGGTCTTCTGCTGCAGATAGGATCCTTCCCTTGTCTCCATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113485.9 ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000131252.8 |
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| CDS-3UTR GCA 90 bp | ATCTGCAGCAGAAGACCGGGGAGAGCATCTCCTTGGACGGAGTCTGAAGAAAGGCAGGCCTCTGAAATTTaGAATCAGAAGCAATGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: ICSRRPGRASPWTESEERQASEI*NQKQCD Trigger: GTCACATTGCTTCTGATTGCAAATTTCAGAGGCCTG...CCTTTCTTCAGACTCCGTCCAAGGAGATGCTCTCCCCGGTCTTCTGCTGCAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000131252.8 |
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| CDS-3UTR CCA 90 bp | GGAGAGGAATGGAGACAAGGGAAGGATCCTATCTGCAGCAGAAGACCGGGGAGACTTGTAATCTGCAGGTaGTTTAAAGTCTGGGTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: GEEWRQGKDPICSRRPGRLVICR*FKVWVE Trigger: CTCAACCCAGACTTTAAACCACCTGCAGATTACAAG...TCTCCCCGGTCTTCTGCTGCAGATAGGATCCTTCCCTTGTCTCCATTCCTCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113485.9 ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000131252.8 |
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| CDS-3UTR CCA 90 bp | ATTAATAGCCAAAGCCTGTACCTAAACCATTTGCCCCTCTCCCTTTGGGAGGAGGCTCACACGTGTTGCTaGAGGCTTGTAATCTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: INSQSLYLNHLPLSLWEEAHTCC*RLVICR Trigger: CCTGCAGATTACAAGCCTCCAGCAACACGTGTGAGC...CTCCTCCCAAAGGGAGAGGGGCAAATGGTTTAGGTACAGGCTTTGGCTATTAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000131252.8 |
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| CDS-3UTR CCA 90 bp | GAGCCAGTGTGTTCCGATTCCGTCCACAAAAATAACTCAGGCTGCTTTGCCGAAATCGTTCTGGTCCTCTaGGGTCTCAATACCCTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: EPVCSDSVHKNNSGCFAEIVLVL*GLNTLL Trigger: AAGCAGGGTATTGAGACCCCAGAGGACCAGAACGAT...TTCGGCAAAGCAGCCTGAGTTATTTTTGTGGACGGAATCGGAACACACTGGCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000113487.8 ENSMUST00000131252.8 |
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| CDS-3UTR CCA 90 bp | ATGGAGCCAGTGTGTTCCGATTCCGTCCACAAAAATAACTCAGGCTGCTTTGCCAGAATTCATCCAGGGTaGGCGGCTCTGAGTTGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: MEPVCSDSVHKNNSGCFARIHPG*AALSCR Trigger: TCTACAACTCAGAGCCGCCCACCCTGGATGAATTCT...GGCAAAGCAGCCTGAGTTATTTTTGTGGACGGAATCGGAACACACTGGCTCCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000113487.8 ENSMUST00000124667.2 ENSMUST00000131252.8 |
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| CDS-3UTR CCA 90 bp | TTTCACAATATGGAGCCAGTGTGTTCCGATTCCGTCCACAAAAATAACTCAGGCGTTCATCGGTGGTGGTaGTGGCTGCATCCAAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: FHNMEPVCSDSVHKNNSGVHRWW*WLHPRW Trigger: CCACCTTGGATGCAGCCACCACCACCACCGATGAAC...GCCTGAGTTATTTTTGTGGACGGAATCGGAACACACTGGCTCCATATTGTGAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000113487.8 ENSMUST00000124667.2 ENSMUST00000131252.8 |
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| CDS-3UTR CCA 90 bp | TTCACAATATGGAGCCAGTGTGTTCCGATTCCGTCCACAAAAATAACTCAGGCTCTGGTTCATCGGTGGTaGTGGTGGCTGCATCCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: FTIWSQCVPIPSTKITQALVHRW*WWLHPR Trigger: CCTTGGATGCAGCCACCACCACCACCGATGAACCAG...AGCCTGAGTTATTTTTGTGGACGGAATCGGAACACACTGGCTCCATATTGTGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000113487.8 ENSMUST00000124667.2 ENSMUST00000131252.8 |
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| 3UTR CAA 72 bp | CCTGACATTAATAGCCAAAGCCTGTACCTAAACCATTaGCCCCTCTCCCTTTGGGAGGAGAGGAATGGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: PDINSQSLYLNH*PLSLWEERNGD Trigger: GTCTCCATTCCTCTCCTCCCAAAGGGAGAGGGGCAAATGGTTTAGGTACAGGCTTTGGCTATTAATGTCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113485.9 ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000131252.8 |
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| CDS-3UTR TCA 90 bp | TTTTATTCAATGGAACATTTCCCCCTTAGTGCAGTGTTGAATCAAACACAGAAACACCAGGGGCGCTGCTaGGGCTGTCTGCCTGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: FYSMEHFPLSAVLNQTQKHQGRC*GCLPGR Trigger: CCTTCCAGGCAGACAGCCTCAGCAGCGCCCCTGGTG...TTTCTGTGTTTGATTCAACACTGCACTAAGGGGGAAATGTTCCATTGAATAAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000113489.8 |
||
| CDS-3UTR GCA 90 bp | ATTAATAGCCAAAGCCTGTACCTAAACCATTTGCCCCTCTCCCTTTGGGAGGAGCCTCTTCAAGCTTTTTaGGGGTACGGAACTCTCGAG | + |
|
Preference number: 4 (lower is better) Translates to: INSQSLYLNHLPLSLWEEPLQAF*GYGTLE Trigger: CTCGAGAGTTCCGTACCCGCAAAAAGCTTGAAGAGG...CTCCTCCCAAAGGGAGAGGGGCAAATGGTTTAGGTACAGGCTTTGGCTATTAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000113485.9 ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000131252.8 |
||
| CDS-3UTR GCA 90 bp | GAGCATGAAAAAGACTCCAGGCTGGCCTATGGTGGCTTGGGCTGTGCCCTGTACTCTGATCTGTTCTACTaGCTTTTTGACATTCTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: EHEKDSRLAYGGLGCALYSDLFY*LFDILH Trigger: ATGGAGAATGTCAAAAAGGCAGTAGAACAGATCAGA...GTACAGGGCACAGCCCAAGCCACCATAGGCCAGCCTGGAGTCTTTTTCATGCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000131252.8 |
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| CDS-3UTR GCA 90 bp | TGTGTTCCGATTCCGTCCACAAAAATAACTCAGGCTGCTTTGCCGAACCATCCTCATCTTCCCGTAGAGTaGCATTCAAGCGAGCCAACT | + |
|
Preference number: 4 (lower is better) Translates to: CVPIPSTKITQAALPNHPHLPVE*HSSEPT Trigger: AGTTGGCTCGCTTGAATGGCACTCTACGGGAAGATG...AGGATGGTTCGGCAAAGCAGCCTGAGTTATTTTTGTGGACGGAATCGGAACACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000113487.8 ENSMUST00000131252.8 |
||
| CDS-3UTR CCA 90 bp | TCTTTCACTGATCCTTTCCCCCGAATCATGATCTTGGCGTTGCATTCCTTCTCACTCGCTGTTGTAGATTaGTTCAGGGGAAGGGGACCT | + |
|
Preference number: 4 (lower is better) Translates to: SFTDPFPRIMILALHSFSLAVVD*FRGRGP Trigger: AGGTCCCCTTCCCCTGAACCAATCTACAACAGCGAG...TGAGAAGGAATGCAACGCCAAGATCATGATTCGGGGGAAAGGATCAGTGAAAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000113485.9 ENSMUST00000144409.8 |
||
| CDS-3UTR GCA 90 bp | TCCTTTCCCCCGAATCATGATCTTGGCGTTGCATTCCTTCTCAATGTTCTTCAGCCTCTTCAAGCTTTTTaGGGGTACGGAACTCTCGAG | + |
|
Preference number: 4 (lower is better) Translates to: SFPPNHDLGVAFLLNVLQPLQAF*GYGTLE Trigger: CTCGAGAGTTCCGTACCCGCAAAAAGCTTGAAGAGG...CTGAAGAACATTGAGAAGGAATGCAACGCCAAGATCATGATTCGGGGGAAAGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000113485.9 ENSMUST00000144409.8 |
||
| CDS-3UTR GCA 90 bp | AAGGATCCTATCTGCAGCAGAAGACCGGGGAGAGCATCTCCTTGGACGGAGTCTTCTGATCTGTTCTACTaGCTTTTTGACATTCTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: KDPICSRRPGRASPWTESSDLFY*LFDILH Trigger: ATGGAGAATGTCAAAAAGGCAGTAGAACAGATCAGA...AGACTCCGTCCAAGGAGATGCTCTCCCCGGTCTTCTGCTGCAGATAGGATCCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000131252.8 |
||
| CDS-3UTR GCA 90 bp | ATTAATAGCCAAAGCCTGTACCTAAACCATTTGCCCCTCTCCCTTTGGGAGGAGGCCAACTCTCGAAGCTaGATTTTCCGTAGATCGTTC | + |
|
Preference number: 4 (lower is better) Translates to: INSQSLYLNHLPLSLWEEANSRS*IFRRSF Trigger: GAACGATCTACGGAAAATGCAGCTTCGAGAGTTGGC...CTCCTCCCAAAGGGAGAGGGGCAAATGGTTTAGGTACAGGCTTTGGCTATTAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000131252.8 |
||
| CDS-3UTR CCA 90 bp | ATATGGAGCCAGTGTGTTCCGATTCCGTCCACAAAAATAACTCAGGCTGCTTTGTGCTCCATTGTGTCTTaGTTCCATCGGCTCCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: IWSQCVPIPSTKITQAALCSIVS*FHRLLF Trigger: GAAGAGGAGCCGATGGAACCAAGACACAATGGAGCA...CAAAGCAGCCTGAGTTATTTTTGTGGACGGAATCGGAACACACTGGCTCCATAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000113485.9 ENSMUST00000113487.8 ENSMUST00000131252.8 |
||
| CDS-3UTR CCA 90 bp | CTCTGCCAGGGCCTTAAGATCCTATTATCATCTTCCCGTAGAGTGCCATTCAAGAACTGTAGGCATGCCTaGAATCACTGTCTTCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LCQGLKILLSSSRRVPFKNCRHA*NHCLLL Trigger: GAGCAGAAGACAGTGATTCCAGGCATGCCTACAGTT...CTTGAATGGCACTCTACGGGAAGATGATAATAGGATCTTAAGGCCCTGGCAGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113485.9 |
||
| CDS-3UTR CCA 90 bp | TTCTCAATGTTCTTCAGGGTGTTCCCTCTGGGTCCAATTAGGAGCCCCACAAAAAACTGTAGGCATGCCTaGAATCACTGTCTTCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: FSMFFRVFPLGPIRSPTKNCRHA*NHCLLL Trigger: GAGCAGAAGACAGTGATTCCAGGCATGCCTACAGTT...TTTTGTGGGGCTCCTAATTGGACCCAGAGGGAACACCCTGAAGAACATTGAGAA 48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000113485.9 ENSMUST00000144409.8 |
||
| CDS-3UTR CCA 90 bp | CTGTGCCCTGTACTGCTGGCAGGAGTGCAGGAAGATGTGAATCCCACTGCCAAACACAAAATTGATTTCTaGATATTCGTCTTGGGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: LCPVLLAGVQEDVNPTAKHKIDF*IFVLGD Trigger: ATCCCCCAAGACGAATATCCAGAAATCAATTTTGTG...TTTGGCAGTGGGATTCACATCTTCCTGCACTCCTGCCAGCAGTACAGGGCACAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000131252.8 |
||
| CDS-3UTR CCA 90 bp | ATGTCAAAGATAAACCACCTACTTATTTTGAATGTGGCTGAAGCCCTTCAACAAGAGAGACGGTGGTGGTaGGTTGCTGGCAGGAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: MSKINHLLILNVAEALQQERRWW*VAGRSS Trigger: GCTGCTCCTGCCAGCAACCCACCACCACCGTCTCTC...TTGTTGAAGGGCTTCAGCCACATTCAAAATAAGTAGGTGGTTTATCTTTGACAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000131252.8 |
||
| CDS-3UTR GCA 90 bp | TTCTCAATGTTCTTCAGGGTGTTCCCTCTGGGTCCAATTAGGAGCCCCACAAAATCTGTAATAAGGGTGTaGCGCTCCTCTTCAAGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: FSMFFRVFPLGPIRSPTKSVIRV*RSSSSF Trigger: AAAGCTTGAAGAGGAGCGGCACACCCTTATTACAGA...TTTTGTGGGGCTCCTAATTGGACCCAGAGGGAACACCCTGAAGAACATTGAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000113485.9 ENSMUST00000144409.8 |
||
| CDS-3UTR GCA 90 bp | TTTCACAATATGGAGCCAGTGTGTTCCGATTCCGTCCACAAAAATAACTCAGGCCATCTTCCCGTAGAGTaGCATTCAAGCGAGCCAACT | + |
|
Preference number: 4 (lower is better) Translates to: FHNMEPVCSDSVHKNNSGHLPVE*HSSEPT Trigger: AGTTGGCTCGCTTGAATGGCACTCTACGGGAAGATG...GCCTGAGTTATTTTTGTGGACGGAATCGGAACACACTGGCTCCATATTGTGAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000113487.8 ENSMUST00000131252.8 |
||
| CDS-3UTR GCA 90 bp | ATGGAGCCAGTGTGTTCCGATTCCGTCCACAAAAATAACTCAGGCTGCTTTGCCCAGGCCTCTGAAATTTaGAATCAGAAGCAATGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: MEPVCSDSVHKNNSGCFAQASEI*NQKQCD Trigger: GTCACATTGCTTCTGATTGCAAATTTCAGAGGCCTG...GGCAAAGCAGCCTGAGTTATTTTTGTGGACGGAATCGGAACACACTGGCTCCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000113487.8 ENSMUST00000131252.8 |
||
| CDS-3UTR CCA 90 bp | ATGGAGCCAGTGTGTTCCGATTCCGTCCACAAAAATAACTCAGGCTGCTTTGCCCTTGTAATCTGCAGGTaGTTTAAAGTCTGGGTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: MEPVCSDSVHKNNSGCFALVICR*FKVWVE Trigger: CTCAACCCAGACTTTAAACCACCTGCAGATTACAAG...GGCAAAGCAGCCTGAGTTATTTTTGTGGACGGAATCGGAACACACTGGCTCCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000113485.9 ENSMUST00000113487.8 ENSMUST00000131252.8 |
||
| CDS-3UTR CCA 90 bp | TTCACAATATGGAGCCAGTGTGTTCCGATTCCGTCCACAAAAATAACTCAGGCTATCGTTCTGGTCCTCTaGGGTCTCAATACCCTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: FTIWSQCVPIPSTKITQAIVLVL*GLNTLL Trigger: AAGCAGGGTATTGAGACCCCAGAGGACCAGAACGAT...AGCCTGAGTTATTTTTGTGGACGGAATCGGAACACACTGGCTCCATATTGTGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000113487.8 ENSMUST00000131252.8 |
||
| CDS-3UTR TCA 90 bp | CAGTGTGTTCCGATTCCGTCCACAAAAATAACTCAGGCTGCTTTGCCGAACCATGCTTCAGGATGTTTCTaGTCTGTTCTACTGCCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: QCVPIPSTKITQAALPNHASGCF*SVLLPF Trigger: AAAAGGCAGTAGAACAGATCAGAAACATCCTGAAGC...ATGGTTCGGCAAAGCAGCCTGAGTTATTTTTGTGGACGGAATCGGAACACACTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000113487.8 ENSMUST00000131252.8 |
||
| CDS-3UTR TCA 90 bp | AAGATGTCAAAGATAAACCACCTACTTATTTTGAATGTGGCTGAAGCCCTTCAATGCTTTATCCTGAGCTaGCTGAGGGTCGCCAGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: KMSKINHLLILNVAEALQCFILS*LRVARP Trigger: AGGCCTGGCGACCCTCAGTCAGCTCAGGATAAAGCA...TTGAAGGGCTTCAGCCACATTCAAAATAAGTAGGTGGTTTATCTTTGACATCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000131252.8 |
||
| CDS-3UTR GCA 90 bp | AAAAGAACGCGCATTACACATTATTATCAACATAATCACTCCATGAAGAGGGAAGGGAGGGATCTTTGCTaGCATGGCAAGGGGGTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: KRTRITHYYQHNHSMKREGRDLC*HGKGVL Trigger: CAGCACCCCCTTGCCATGGCAGCAAAGATCCCTCCC...TTCCCTCTTCATGGAGTGATTATGTTGATAATAATGTGTAATGCGCGTTCTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 |
||
| CDS-3UTR CCA 90 bp | TTCACAATATGGAGCCAGTGTGTTCCGATTCCGTCCACAAAAATAACTCAGGCTAACTGTAGGCATGCCTaGAATCACTGTCTTCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: FTIWSQCVPIPSTKITQANCRHA*NHCLLL Trigger: GAGCAGAAGACAGTGATTCCAGGCATGCCTACAGTT...AGCCTGAGTTATTTTTGTGGACGGAATCGGAACACACTGGCTCCATATTGTGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000113485.9 ENSMUST00000113487.8 ENSMUST00000131252.8 |
||
| CDS-3UTR CCA 90 bp | CAGTGTGTTCCGATTCCGTCCACAAAAATAACTCAGGCTGCTTTGCCGAACCATCTTGTAATCTGCAGGTaGTTTAAAGTCTGGGTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: QCVPIPSTKITQAALPNHLVICR*FKVWVE Trigger: CTCAACCCAGACTTTAAACCACCTGCAGATTACAAG...ATGGTTCGGCAAAGCAGCCTGAGTTATTTTTGTGGACGGAATCGGAACACACTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000113485.9 ENSMUST00000113487.8 ENSMUST00000131252.8 |
||
| CDS-3UTR CCA 90 bp | AATAGCCAAAGCCTGTACCTAAACCATTTGCCCCTCTCCCTTTGGGAGGAGAGGCACAAAATTGATTTCTaGATATTCGTCTTGGGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: NSQSLYLNHLPLSLWEERHKIDF*IFVLGD Trigger: ATCCCCCAAGACGAATATCCAGAAATCAATTTTGTG...CCTCTCCTCCCAAAGGGAGAGGGGCAAATGGTTTAGGTACAGGCTTTGGCTATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000131252.8 |
||
| CDS-3UTR CCA 90 bp | AATATGGAGCCAGTGTGTTCCGATTCCGTCCACAAAAATAACTCAGGCTGCTTTTTCCGTAGATCGTTCTaGTCCTCTGGGGTCTCAATA | + |
|
Preference number: 4 (lower is better) Translates to: NMEPVCSDSVHKNNSGCFFRRSF*SSGVSI Trigger: TATTGAGACCCCAGAGGACCAGAACGATCTACGGAA...AAAGCAGCCTGAGTTATTTTTGTGGACGGAATCGGAACACACTGGCTCCATATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000113487.8 ENSMUST00000131252.8 |
||
| CDS-3UTR CCA 90 bp | AATTTCACAATATGGAGCCAGTGTGTTCCGATTCCGTCCACAAAAATAACTCAGTGGCTGCATCCAAGGTaGTGGTGGTCCATTTGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: NFTIWSQCVPIPSTKITQWLHPR*WWSIWV Trigger: AACCCAAATGGACCACCACCACCTTGGATGCAGCCA...CTGAGTTATTTTTGTGGACGGAATCGGAACACACTGGCTCCATATTGTGAAATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000113487.8 ENSMUST00000124667.2 ENSMUST00000131252.8 |
||
| CDS-3UTR TCA 90 bp | TTTTATTCAATGGAACATTTCCCCCTTAGTGCAGTGTTGAATCAAACACAGAAACAGGGTGGGCGGCTCTaGGTTGTAGACATGAGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: FYSMEHFPLSAVLNQTQKQGGRL*VVDMRD Trigger: GTCTCTCATGTCTACAACTCAGAGCCGCCCACCCTG...TTTCTGTGTTTGATTCAACACTGCACTAAGGGGGAAATGTTCCATTGAATAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000131252.8 |
||
| CDS-3UTR GCA 90 bp | GAGCCAGTGTGTTCCGATTCCGTCCACAAAAATAACTCAGGCTGCTTTGCCGAATCTGATCTGTTCTACTaGCTTTTTGACATTCTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: EPVCSDSVHKNNSGCFAESDLFY*LFDILH Trigger: ATGGAGAATGTCAAAAAGGCAGTAGAACAGATCAGA...TTCGGCAAAGCAGCCTGAGTTATTTTTGTGGACGGAATCGGAACACACTGGCTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000113487.8 ENSMUST00000131252.8 |
||
| CDS-3UTR GCA 90 bp | AAACCAGTGAAAAGAACGCGCATTACACATTATTATCAACATAATCACTCCATGTTGTGCTGCATGGGATaGCCACCATGCCCACCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: KPVKRTRITHYYQHNHSMLCCMG*PPCPPV Trigger: GACAGGTGGGCATGGTGGGCATCCCATGCAGCACAA...CATGGAGTGATTATGTTGATAATAATGTGTAATGCGCGTTCTTTTCACTGGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000131252.8 |
||
| CDS-3UTR CCA 90 bp | CTGGCAACATCTGACCATCTTTACGCCCAACTTTCCCTTCTTTCACTGATCCTTCTTGTAATCTGCAGGTaGTTTAAAGTCTGGGTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: LATSDHLYAQLSLLSLILLVICR*FKVWVE Trigger: CTCAACCCAGACTTTAAACCACCTGCAGATTACAAG...AAGGATCAGTGAAAGAAGGGAAAGTTGGGCGTAAAGATGGTCAGATGTTGCCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113485.9 ENSMUST00000144409.8 |
||
| CDS-3UTR CCA 90 bp | ATGTCAAAGATAAACCACCTACTTATTTTGAATGTGGCTGAAGCCCTTCAACAACTGCATCCAAGGTGGTaGTGGTCCATTTGGGTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: MSKINHLLILNVAEALQQLHPRW*WSIWVV Trigger: CACAACCCAAATGGACCACCACCACCTTGGATGCAG...TTGTTGAAGGGCTTCAGCCACATTCAAAATAAGTAGGTGGTTTATCTTTGACAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000131252.8 |
||
| CDS-3UTR CCA 90 bp | AAACCAGTGAAAAGAACGCGCATTACACATTATTATCAACATAATCACTCCATGTGGTGGTGGTCCATTTaGGTTGTGCTGCATGGGATG | + |
|
Preference number: 4 (lower is better) Translates to: KPVKRTRITHYYQHNHSMWWWSI*VVLHGM Trigger: CATCCCATGCAGCACAACCCAAATGGACCACCACCA...CATGGAGTGATTATGTTGATAATAATGTGTAATGCGCGTTCTTTTCACTGGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000131252.8 |
||
| CDS-3UTR CCA 90 bp | AAAAGAACGCGCATTACACATTATTATCAACATAATCACTCCATGAAGAGGGAACTGCATCCAAGGTGGTaGTGGTCCATTTGGGTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: KRTRITHYYQHNHSMKRELHPRW*WSIWVV Trigger: CACAACCCAAATGGACCACCACCACCTTGGATGCAG...TTCCCTCTTCATGGAGTGATTATGTTGATAATAATGTGTAATGCGCGTTCTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000131252.8 |
||
| CDS-3UTR TCA 90 bp | AAACCAGTGAAAAGAACGCGCATTACACATTATTATCAACATAATCACTCCATGCCATCGTATTGGCAGTaGCTAGAGCATGAAGAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: KPVKRTRITHYYQHNHSMPSYWQ*LEHEEA Trigger: AGCCTCTTCATGCTCTAGTCACTGCCAATACGATGG...CATGGAGTGATTATGTTGATAATAATGTGTAATGCGCGTTCTTTTCACTGGTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000131252.8 |
||
| CDS-3UTR TCA 90 bp | TTTTATTCAATGGAACATTTCCCCCTTAGTGCAGTGTTGAATCAAACACAGAAAGTAGGGCCGATTCTCTaGAGGACCAGAATTCATCCA | + |
|
Preference number: 4 (lower is better) Translates to: FYSMEHFPLSAVLNQTQKVGPIL*RTRIHP Trigger: TGGATGAATTCTGGTCCTTCAGAGAATCGGCCCTAC...TTTCTGTGTTTGATTCAACACTGCACTAAGGGGGAAATGTTCCATTGAATAAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000131252.8 |
||
| CDS-3UTR CCA 90 bp | AAGATGTCAAAGATAAACCACCTACTTATTTTGAATGTGGCTGAAGCCCTTCAAAGGCTCATCTTCGCCTaGCAACATCTGACCATCTTT | + |
|
Preference number: 4 (lower is better) Translates to: KMSKINHLLILNVAEALQRLIFA*QHLTIF Trigger: AAAGATGGTCAGATGTTGCCAGGCGAAGATGAGCCT...TTGAAGGGCTTCAGCCACATTCAAAATAAGTAGGTGGTTTATCTTTGACATCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000131252.8 |
||
| CDS-3UTR CCA 90 bp | AAACCAGTGAAAAGAACGCGCATTACACATTATTATCAACATAATCACTCCATGAGAATTCATCCAGGGTaGGCGGCTCTGAGTTGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: KPVKRTRITHYYQHNHSMRIHPG*AALSCR Trigger: TCTACAACTCAGAGCCGCCCACCCTGGATGAATTCT...CATGGAGTGATTATGTTGATAATAATGTGTAATGCGCGTTCTTTTCACTGGTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000131252.8 |
||
| CDS-3UTR GCA 90 bp | ATGTCAAAGATAAACCACCTACTTATTTTGAATGTGGCTGAAGCCCTTCAACAACAGGCCTCTGAAATTTaGAATCAGAAGCAATGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: MSKINHLLILNVAEALQQQASEI*NQKQCD Trigger: GTCACATTGCTTCTGATTGCAAATTTCAGAGGCCTG...TTGTTGAAGGGCTTCAGCCACATTCAAAATAAGTAGGTGGTTTATCTTTGACAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000131252.8 |
||
| CDS-3UTR CCA 90 bp | TTTTATTCAATGGAACATTTCCCCCTTAGTGCAGTGTTGAATCAAACACAGAAACACAAAATTGATTTCTaGATATTCGTCTTGGGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: FYSMEHFPLSAVLNQTQKHKIDF*IFVLGD Trigger: ATCCCCCAAGACGAATATCCAGAAATCAATTTTGTG...TTTCTGTGTTTGATTCAACACTGCACTAAGGGGGAAATGTTCCATTGAATAAAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000131252.8 |
||
| CDS CCA 90 bp | CTGCCTGGAAGGGTCACCAATGGGCGCGGAAAGTCCTCACTCTCATaGCTCGGGCCATCGCTGCCGCGGGGAGGGATCATCATGCCGGCG | + |
|
Preference number: 5 (lower is better) Translates to: LPGRVTNGRGKSSLS*LGPSLPRGGIIMPA Trigger: CGCCGGCATGATGATCCCTCCCCGCGGCAGCGATGGCCCGAGCCATGAGAGTGAGGACTTTCCGCGCCCATTGGTGACCCTTCCAGGCAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113488.8 |
||
| CDS CCA 90 bp | GGGACCATTGGAGGAGGGCCATGGTGCCCAGGTGGGTGGGGGCCCTaGTTCATCGGTGGTGGTGGTGGCTGCATCCAAGGTGGTGGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: GTIGGGPWCPGGWGP*FIGGGGGCIQGGGG Trigger: ACCACCACCACCTTGGATGCAGCCACCACCACCACCGATGAACCAGGGCCCCCACCCACCTGGGCACCATGGCCCTCCTCCAATGGTCCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000124667.2 |
||
| CDS CCA 90 bp | GGTACCATTGGAGGAGGGCCATGGTGCCCAGGTGGGTGGGGGCCCTaGTTCATCGGTGGTGGTGGTGGCTGCATCCAAGGTGGTGGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: GTIGGGPWCPGGWGP*FIGGGGGCIQGGGG Trigger: ACCACCACCACCTTGGATGCAGCCACCACCACCACCGATGAACCAGGGCCCCCACCCACCTGGGCACCATGGCCCTCCTCCAATGGTACC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162237.2 |
||
| CDS CCA 90 bp | CTGCCTGGAAGGGTCACCAATGGGCGCGGAAAGTCCTCACTCTCATaGCTCGGGCCATCGCTGCCGCGGGGAGGGATCTTTGCTGCCATG | + |
|
Preference number: 5 (lower is better) Translates to: LPGRVTNGRGKSSLS*LGPSLPRGGIFAAM Trigger: CATGGCAGCAAAGATCCCTCCCCGCGGCAGCGATGGCCCGAGCCATGAGAGTGAGGACTTTCCGCGCCCATTGGTGACCCTTCCAGGCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113489.8 ENSMUST00000125516.8 |
||
| CDS-3UTR CAA 90 bp | GGCTGTCTGCCTGGAAGGGTCACCAATGGGCGCGGAAAGTCCTCACTCTCATGGAGCCGCCTGCTGCTGTaGCCATGGCGGGATGGACCC | + |
|
Preference number: 5 (lower is better) Translates to: GCLPGRVTNGRGKSSLSWSRLLL*PWRDGP Trigger: GGGTCCATCCCGCCATGGCAACAGCAGCAGGCGGCT...CCATGAGAGTGAGGACTTTCCGCGCCCATTGGTGACCCTTCCAGGCAGACAGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131252.8 |
||
| CDS-3UTR CAA 90 bp | GAGAGGAATGGAGACAAGGGAAGGATCCTATCTGCAGCAGAAGACCGGGGAGAGCGCGGGGAGGGATCTTaGCTGCCATGGCAAGGGGGT | + |
|
Preference number: 5 (lower is better) Translates to: ERNGDKGRILSAAEDRGERGEGS*LPWQGG Trigger: ACCCCCTTGCCATGGCAGCAAAGATCCCTCCCCGCG...CTCTCCCCGGTCTTCTGCTGCAGATAGGATCCTTCCCTTGTCTCCATTCCTCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000125516.8 |
||
| CDS-3UTR CAA 90 bp | TCAGGCTGCTTTGCCGAACCATCCTGTCCACCAGGGGCGCTGCTGAGGCTGTCTCTGCTCCATTGTGTCTaGGTTCCATCGGCTCCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: SGCFAEPSCPPGALLRLSLLHCV*VPSAPL Trigger: AAGAGGAGCCGATGGAACCAAGACACAATGGAGCAG...AGACAGCCTCAGCAGCGCCCCTGGTGGACAGGATGGTTCGGCAAAGCAGCCTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000113485.9 ENSMUST00000113487.8 ENSMUST00000131252.8 |
||
| CDS-3UTR CAA 90 bp | TGCCAGGAAAGCTCAAGCTGGCGCCCCACTACCACTGCCCGTTTCCCAAGCGAGCCAGCCCCTCCACACTaGGTACACACAGTAGTATTG | + |
|
Preference number: 5 (lower is better) Translates to: CQESSSWRPTTTARFPSEPAPPH*VHTVVL Trigger: CAATACTACTGTGTGTACCAAGTGTGGAGGGGCTGG...CTCGCTTGGGAAACGGGCAGTGGTAGTGGGGCGCCAGCTTGAGCTTTCCTGGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131252.8 |
||
| CDS-3UTR CAA 90 bp | GGGAAGGATCCTATCTGCAGCAGAAGACCGGGGAGAGCATCTCCTTGGACGGAGGGTGGTCCATTTGGGTaGTGCTGCATGGGATGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: GKDPICSRRPGRASPWTEGGPFG*CCMGCP Trigger: TGGGCATCCCATGCAGCACAACCCAAATGGACCACC...CTCCGTCCAAGGAGATGCTCTCCCCGGTCTTCTGCTGCAGATAGGATCCTTCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000125516.8 ENSMUST00000131252.8 |
||
| CDS-3UTR CAA 90 bp | AGGATCCTATCTGCAGCAGAAGACCGGGGAGAGCATCTCCTTGGACGGAGTCTGCCAGGTACTGATCCATaGGAGGAGGGCCATGGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: RILSAAEDRGEHLLGRSLPGTDP*EEGHGA Trigger: GGCACCATGGCCCTCCTCCAATGGATCAGTACCTGG...CAGACTCCGTCCAAGGAGATGCTCTCCCCGGTCTTCTGCTGCAGATAGGATCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000113487.8 ENSMUST00000125516.8 ENSMUST00000131252.8 |
||
| CDS-3UTR CAA 90 bp | AAGGAAGGGGCAAAGCAGCAGAACGAAGAACAAGGGACACAAGCCCCAGACACTCGCGGGGAGGGATCTTaGCTGCCATGGCAAGGGGGT | + |
|
Preference number: 5 (lower is better) Translates to: KEGAKQQNEEQGTQAPDTRGEGS*LPWQGG Trigger: ACCCCCTTGCCATGGCAGCAAAGATCCCTCCCCGCG...AGTGTCTGGGGCTTGTGTCCCTTGTTCTTCGTTCTGCTGCTTTGCCCCTTCCTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 |
||
| CDS-3UTR CAA 90 bp | AAGCGAGTCCAGTCACTTGGCCCAGCCCAGTGCGTGCACACACACACATGCGTGCTGCTCCATTGTGTCTaGGTTCCATCGGCTCCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: KRVQSLGPAQCVHTHTCVLLHCV*VPSAPL Trigger: AAGAGGAGCCGATGGAACCAAGACACAATGGAGCAG...CACGCATGTGTGTGTGTGCACGCACTGGGCTGGGCCAAGTGACTGGACTCGCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113485.9 ENSMUST00000131252.8 |
||
| CDS-3UTR CAA 90 bp | GGTGACCAGAGCATGAAAAAGACTCCAGGCTGGCCTATGGTGGCTTGGGCTGTGGGTGGTCCATTTGGGTaGTGCTGCATGGGATGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: GDQSMKKTPGWPMVAWAVGGPFG*CCMGCP Trigger: TGGGCATCCCATGCAGCACAACCCAAATGGACCACC...CACAGCCCAAGCCACCATAGGCCAGCCTGGAGTCTTTTTCATGCTCTGGTCACC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000131252.8 |
||
| CDS-3UTR CAA 90 bp | AAGGATCCTATCTGCAGCAGAAGACCGGGGAGAGCATCTCCTTGGACGGAGTCTCCAGGTACTGATCCATaGGAGGAGGGCCATGGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: KDPICSRRPGRASPWTESPGTDP*EEGHGA Trigger: GGCACCATGGCCCTCCTCCAATGGATCAGTACCTGG...AGACTCCGTCCAAGGAGATGCTCTCCCCGGTCTTCTGCTGCAGATAGGATCCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000113487.8 ENSMUST00000125516.8 ENSMUST00000131252.8 |
||
| CDS-3UTR CAA 90 bp | ATCTGCAGCAGAAGACCGGGGAGAGCATCTCCTTGGACGGAGTCTGAAGAAAGGCCAGGTACTGATCCATaGGAGGAGGGCCATGGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: ICSRRPGRASPWTESEERPGTDP*EEGHGA Trigger: GGCACCATGGCCCTCCTCCAATGGATCAGTACCTGG...CCTTTCTTCAGACTCCGTCCAAGGAGATGCTCTCCCCGGTCTTCTGCTGCAGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000113487.8 ENSMUST00000125516.8 ENSMUST00000131252.8 |
||
| CDS-3UTR CAA 90 bp | AAGCCTGTACCTAAACCATTTGCCCCTCTCCCTTTGGGAGGAGAGGAATGGAGACGCGGGGAGGGATCTTaGCTGCCATGGCAAGGGGGT | + |
|
Preference number: 5 (lower is better) Translates to: KPVPKPFAPLPLGGEEWRRGEGS*LPWQGG Trigger: ACCCCCTTGCCATGGCAGCAAAGATCCCTCCCCGCG...TCTCCATTCCTCTCCTCCCAAAGGGAGAGGGGCAAATGGTTTAGGTACAGGCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000125516.8 |
||
| CDS-3UTR CAA 90 bp | ATGGAGACAAGGGAAGGATCCTATCTGCAGCAGAAGACCGGGGAGAGCATCTCCCCTCGCTGTTGTAGATaGGTTCAGGGGAAGGGGACC | + |
|
Preference number: 5 (lower is better) Translates to: METREGSYLQQKTGESISPRCCR*VQGKGT Trigger: GGTCCCCTTCCCCTGAACCAATCTACAACAGCGAGG...GGAGATGCTCTCCCCGGTCTTCTGCTGCAGATAGGATCCTTCCCTTGTCTCCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000113485.9 ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000131252.8 |
||
| CDS-3UTR CAA 90 bp | AGGATCCTATCTGCAGCAGAAGACCGGGGAGAGCATCTCCTTGGACGGAGTCTGGTGGTGGTGGTCCATTaGGGTTGTGCTGCATGGGAT | + |
|
Preference number: 5 (lower is better) Translates to: RILSAAEDRGEHLLGRSLVVVVH*GCAAWD Trigger: ATCCCATGCAGCACAACCCAAATGGACCACCACCAC...CAGACTCCGTCCAAGGAGATGCTCTCCCCGGTCTTCTGCTGCAGATAGGATCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000125516.8 ENSMUST00000131252.8 |
||
| CDS-3UTR CAA 90 bp | AGGGAAGGATCCTATCTGCAGCAGAAGACCGGGGAGAGCATCTCCTTGGACGGAGGTAGTCGTCGTATTTaGCTGCCATGGCAAGGGGGT | + |
|
Preference number: 5 (lower is better) Translates to: REGSYLQQKTGESISLDGGSRRI*LPWQGG Trigger: ACCCCCTTGCCATGGCAGCAAAATACGACGACTACC...TCCGTCCAAGGAGATGCTCTCCCCGGTCTTCTGCTGCAGATAGGATCCTTCCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000131252.8 |
||
| CDS-3UTR CAA 90 bp | GGAAGGGGCAAAGCAGCAGAACGAAGAACAAGGGACACAAGCCCCAGACACTGCCTGCTCCATTGTGTCTaGGTTCCATCGGCTCCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: GRGKAAERRTRDTSPRHCLLHCV*VPSAPL Trigger: AAGAGGAGCCGATGGAACCAAGACACAATGGAGCAG...GCAGTGTCTGGGGCTTGTGTCCCTTGTTCTTCGTTCTGCTGCTTTGCCCCTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000113485.9 ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000131252.8 |
||
| CDS-3UTR CAA 90 bp | GGGAAGGATCCTATCTGCAGCAGAAGACCGGGGAGAGCATCTCCTTGGACGGAGCCCCGAATCATGATCTaGGCGTTGCATTCCTTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: GKDPICSRRPGRASPWTEPRIMI*ALHSFS Trigger: TGAGAAGGAATGCAACGCCAAGATCATGATTCGGGG...CTCCGTCCAAGGAGATGCTCTCCCCGGTCTTCTGCTGCAGATAGGATCCTTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000131252.8 |
||
| CDS-3UTR CAA 90 bp | ATCCTATCTGCAGCAGAAGACCGGGGAGAGCATCTCCTTGGACGGAGTCTGAAGGTGGTGGTGGTCCATTaGGGTTGTGCTGCATGGGAT | + |
|
Preference number: 5 (lower is better) Translates to: ILSAAEDRGEHLLGRSLKVVVVH*GCAAWD Trigger: ATCCCATGCAGCACAACCCAAATGGACCACCACCAC...CTTCAGACTCCGTCCAAGGAGATGCTCTCCCCGGTCTTCTGCTGCAGATAGGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000125516.8 ENSMUST00000131252.8 |
||
| CDS-3UTR CAA 90 bp | CAGTGTGTTCCGATTCCGTCCACAAAAATAACTCAGGCTGCTTTGCCGAACCATCGCGGGGAGGGATCTTaGCTGCCATGGCAAGGGGGT | + |
|
Preference number: 5 (lower is better) Translates to: QCVPIPSTKITQAALPNHRGEGS*LPWQGG Trigger: ACCCCCTTGCCATGGCAGCAAAGATCCCTCCCCGCG...ATGGTTCGGCAAAGCAGCCTGAGTTATTTTTGTGGACGGAATCGGAACACACTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000113487.8 ENSMUST00000124667.2 |
||
| CDS-3UTR CAA 90 bp | GGAAGGAAGGGGCAAAGCAGCAGAACGAAGAACAAGGGACACAAGCCCCAGACAGTACTGATTTACCCATaGGAGGAGGGCCATGGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: GRKGQSSRTKNKGHKPQTVLIYP*EEGHGA Trigger: GGCACCATGGCCCTCCTCCAATGGGTAAATCAGTAC...TGTCTGGGGCTTGTGTCCCTTGTTCTTCGTTCTGCTGCTTTGCCCCTTCCTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000113489.8 |
||
| CDS-3UTR CAA 90 bp | GAGGAATGGAGACAAGGGAAGGATCCTATCTGCAGCAGAAGACCGGGGAGAGCATGCTGCTGCTTTTCCTaGATGCAGGCGATAGACCCC | + |
|
Preference number: 5 (lower is better) Translates to: EEWRQGKDPICSRRPGRACCCFS*MQAIDP Trigger: GGGGTCTATCGCCTGCATCAAGGAAAAGCAGCAGCA...TGCTCTCCCCGGTCTTCTGCTGCAGATAGGATCCTTCCCTTGTCTCCATTCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125516.8 |
||
| CDS-3UTR CAA 90 bp | CCGATTCCGTCCACAAAAATAACTCAGGCTGCTTTGCCGAACCATCCTGTCCACCCTCGCTGTTGTAGATaGGTTCAGGGGAAGGGGACC | + |
|
Preference number: 5 (lower is better) Translates to: PIPSTKITQAALPNHPVHPRCCR*VQGKGT Trigger: GGTCCCCTTCCCCTGAACCAATCTACAACAGCGAGG...GTGGACAGGATGGTTCGGCAAAGCAGCCTGAGTTATTTTTGTGGACGGAATCGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000113485.9 ENSMUST00000113487.8 ENSMUST00000131252.8 |
||
| CDS-3UTR CAA 90 bp | GGAAGGGGCAAAGCAGCAGAACGAAGAACAAGGGACACAAGCCCCAGACACTGCTATCGCTCACACGTGTaGCTGGAGGCTTGTAATCTG | + |
|
Preference number: 5 (lower is better) Translates to: GRGKAAERRTRDTSPRHCYRSHV*LEACNL Trigger: CAGATTACAAGCCTCCAGCAACACGTGTGAGCGATA...GCAGTGTCTGGGGCTTGTGTCCCTTGTTCTTCGTTCTGCTGCTTTGCCCCTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000131252.8 |
||
| CDS-3UTR CAA 90 bp | AAAGCCAAGGTCGAAGAGGGTGGCCAGGCCCTGCCCCCACACTGTAAGGTTAAACCCCGAATCATGATCTaGGCGTTGCATTCCTTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: KAKVEEGGQALPPHCKVKPRIMI*ALHSFS Trigger: TGAGAAGGAATGCAACGCCAAGATCATGATTCGGGG...TTTAACCTTACAGTGTGGGGGCAGGGCCTGGCCACCCTCTTCGACCTTGGCTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000131252.8 |
||
| CDS-3UTR CAA 90 bp | ATCCTATCTGCAGCAGAAGACCGGGGAGAGCATCTCCTTGGACGGAGTCTGAAGCCAGCCCCTCCACACTaGGTACACACAGTAGTATTG | + |
|
Preference number: 5 (lower is better) Translates to: ILSAAEDRGEHLLGRSLKPAPPH*VHTVVL Trigger: CAATACTACTGTGTGTACCAAGTGTGGAGGGGCTGG...CTTCAGACTCCGTCCAAGGAGATGCTCTCCCCGGTCTTCTGCTGCAGATAGGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000131252.8 |
||
| CDS-3UTR CAA 90 bp | TGGAGCCAGTGTGTTCCGATTCCGTCCACAAAAATAACTCAGGCTGCTTTGCCGGGTGGTCCATTTGGGTaGTGCTGCATGGGATGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: WSQCVPIPSTKITQAALPGGPFG*CCMGCP Trigger: TGGGCATCCCATGCAGCACAACCCAAATGGACCACC...CGGCAAAGCAGCCTGAGTTATTTTTGTGGACGGAATCGGAACACACTGGCTCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000113487.8 ENSMUST00000124667.2 ENSMUST00000131252.8 |
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| CDS-3UTR CAA 90 bp | AAGCCTGTACCTAAACCATTTGCCCCTCTCCCTTTGGGAGGAGAGGAATGGAGAGGTGGTCCATTTGGGTaGTGCTGCATGGGATGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: KPVPKPFAPLPLGGEEWRGGPFG*CCMGCP Trigger: TGGGCATCCCATGCAGCACAACCCAAATGGACCACC...TCTCCATTCCTCTCCTCCCAAAGGGAGAGGGGCAAATGGTTTAGGTACAGGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000125516.8 ENSMUST00000131252.8 |
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| CDS-3UTR CAA 90 bp | CCGATTCCGTCCACAAAAATAACTCAGGCTGCTTTGCCGAACCATCCTGTCCACGGTGGTCCATTTGGGTaGTGCTGCATGGGATGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: PIPSTKITQAALPNHPVHGGPFG*CCMGCP Trigger: TGGGCATCCCATGCAGCACAACCCAAATGGACCACC...GTGGACAGGATGGTTCGGCAAAGCAGCCTGAGTTATTTTTGTGGACGGAATCGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000113487.8 ENSMUST00000124667.2 ENSMUST00000131252.8 |
||
| CDS-3UTR CAA 90 bp | AATGGAGACAAGGGAAGGATCCTATCTGCAGCAGAAGACCGGGGAGAGCATCTCGTGGTGGTGGTCCATTaGGGTTGTGCTGCATGGGAT | + |
|
Preference number: 5 (lower is better) Translates to: NGDKGRILSAAEDRGEHLVVVVH*GCAAWD Trigger: ATCCCATGCAGCACAACCCAAATGGACCACCACCAC...GAGATGCTCTCCCCGGTCTTCTGCTGCAGATAGGATCCTTCCCTTGTCTCCATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000125516.8 ENSMUST00000131252.8 |
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| CDS-3UTR CAA 90 bp | AGGAAGGGGCAAAGCAGCAGAACGAAGAACAAGGGACACAAGCCCCAGACACTGTCCTCTTCAAGCTTTTaGCGGGTACGGAACTCTCGA | + |
|
Preference number: 5 (lower is better) Translates to: RKGQSSRTKNKGHKPQTLSSSSF*RVRNSR Trigger: TCGAGAGTTCCGTACCCGCAAAAAGCTTGAAGAGGA...CAGTGTCTGGGGCTTGTGTCCCTTGTTCTTCGTTCTGCTGCTTTGCCCCTTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000113485.9 ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000131252.8 |
||
| CDS-3UTR CAA 90 bp | GGAGAGGAATGGAGACAAGGGAAGGATCCTATCTGCAGCAGAAGACCGGGGAGATCCTCTTCAAGCTTTTaGCGGGTACGGAACTCTCGA | + |
|
Preference number: 5 (lower is better) Translates to: GEEWRQGKDPICSRRPGRSSSSF*RVRNSR Trigger: TCGAGAGTTCCGTACCCGCAAAAAGCTTGAAGAGGA...TCTCCCCGGTCTTCTGCTGCAGATAGGATCCTTCCCTTGTCTCCATTCCTCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000113485.9 ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000131252.8 |
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| CDS-3UTR CAA 90 bp | GAGGAATGGAGACAAGGGAAGGATCCTATCTGCAGCAGAAGACCGGGGAGAGCATCCTCTTCAAGCTTTTaGCGGGTACGGAACTCTCGA | + |
|
Preference number: 5 (lower is better) Translates to: EEWRQGKDPICSRRPGRASSSSF*RVRNSR Trigger: TCGAGAGTTCCGTACCCGCAAAAAGCTTGAAGAGGA...TGCTCTCCCCGGTCTTCTGCTGCAGATAGGATCCTTCCCTTGTCTCCATTCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000113485.9 ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000131252.8 |
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| CDS-3UTR CAA 90 bp | AAGGATCCTATCTGCAGCAGAAGACCGGGGAGAGCATCTCCTTGGACGGAGTCTCCCCGAATCATGATCTaGGCGTTGCATTCCTTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: KDPICSRRPGRASPWTESPRIMI*ALHSFS Trigger: TGAGAAGGAATGCAACGCCAAGATCATGATTCGGGG...AGACTCCGTCCAAGGAGATGCTCTCCCCGGTCTTCTGCTGCAGATAGGATCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000131252.8 |
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| CDS-3UTR CAA 90 bp | AGGGTCACCAATGGGCGCGGAAAGTCCTCACTCTCATGGCTCGGGCCATCGCTGTGTTCTACTGCCTTTTaGACATTCTCCATCGTATTG | + |
|
Preference number: 5 (lower is better) Translates to: RVTNGRGKSSLSWLGPSLCSTAF*TFSIVL Trigger: CAATACGATGGAGAATGTCAAAAAGGCAGTAGAACA...CAGCGATGGCCCGAGCCATGAGAGTGAGGACTTTCCGCGCCCATTGGTGACCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131252.8 |
||
| CDS-3UTR CAA 90 bp | AATGGAGACAAGGGAAGGATCCTATCTGCAGCAGAAGACCGGGGAGAGCATCTCCCAGCCCCTCCACACTaGGTACACACAGTAGTATTG | + |
|
Preference number: 5 (lower is better) Translates to: NGDKGRILSAAEDRGEHLPAPPH*VHTVVL Trigger: CAATACTACTGTGTGTACCAAGTGTGGAGGGGCTGG...GAGATGCTCTCCCCGGTCTTCTGCTGCAGATAGGATCCTTCCCTTGTCTCCATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000131252.8 |
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| CDS-3UTR CAA 90 bp | AAGCCTGTACCTAAACCATTTGCCCCTCTCCCTTTGGGAGGAGAGGAATGGAGACTGCTCCATTGTGTCTaGGTTCCATCGGCTCCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: KPVPKPFAPLPLGGEEWRLLHCV*VPSAPL Trigger: AAGAGGAGCCGATGGAACCAAGACACAATGGAGCAG...TCTCCATTCCTCTCCTCCCAAAGGGAGAGGGGCAAATGGTTTAGGTACAGGCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113485.9 ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000131252.8 |
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| CDS-3UTR CAA 90 bp | CTATCTGCAGCAGAAGACCGGGGAGAGCATCTCCTTGGACGGAGTCTGAAGAAATCCTCTTCAAGCTTTTaGCGGGTACGGAACTCTCGA | + |
|
Preference number: 5 (lower is better) Translates to: LSAAEDRGEHLLGRSLKKSSSSF*RVRNSR Trigger: TCGAGAGTTCCGTACCCGCAAAAAGCTTGAAGAGGA...TTTCTTCAGACTCCGTCCAAGGAGATGCTCTCCCCGGTCTTCTGCTGCAGATAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000113485.9 ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000131252.8 |
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| CDS-3UTR CAA 90 bp | GGAAGGAAGGGGCAAAGCAGCAGAACGAAGAACAAGGGACACAAGCCCCAGACAGTACACACAGTAGTATaGGTAATGCTGCGCGTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: GRKGQSSRTKNKGHKPQTVHTVV*VMLRVS Trigger: AGAGACGCGCAGCATTACCAATACTACTGTGTGTAC...TGTCTGGGGCTTGTGTCCCTTGTTCTTCGTTCTGCTGCTTTGCCCCTTCCTTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000131252.8 |
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| CDS CCA 90 bp | ACTGTAGGCATGCCTGGAATCACTGTCTTCTGCTCCATTGTGTCTTaGTTCCATCGGCTCCTCTTCCTCTTCTTACTTGGGAAGTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: TVGMPGITVFCSIVS*FHRLLFLFLLGKSS Trigger: GCTGGACTTCCCAAGTAAGAAGAGGAAGAGGAGCCGATGGAACCAAGACACAATGGAGCAGAAGACAGTGATTCCAGGCATGCCTACAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000113485.9 ENSMUST00000113487.8 ENSMUST00000113488.8 ENSMUST00000113489.8 ENSMUST00000131252.8 |
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| CDS CCA 90 bp | CACACGTGTTGCTGGAGGCTTGTAATCTGCAGGTGGTTTAAAGTCTaGGTTGAGAGCAACCATCTCTGTAATAAGGGTGTGCCGCTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: HTCCWRLVICRWFKV*VESNHLCNKGVPLL Trigger: GAGGAGCGGCACACCCTTATTACAGAGATGGTTGCTCTCAACCCAGACTTTAAACCACCTGCAGATTACAAGCCTCCAGCAACACGTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000113485.9 ENSMUST00000113487.8 ENSMUST00000113488.8 ENSMUST00000113489.8 ENSMUST00000131252.8 ENSMUST00000144409.8 ENSMUST00000155973.2 |
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| CDS-3UTR CAA 90 bp | CTGGCAACATCTGACCATCTTTACGCCCAACTTTCCCTTCTTTCACTGATCCTTCCTCGCTGTTGTAGATaGGTTCAGGGGAAGGGGACC | + |
|
Preference number: 5 (lower is better) Translates to: LATSDHLYAQLSLLSLILPRCCR*VQGKGT Trigger: GGTCCCCTTCCCCTGAACCAATCTACAACAGCGAGG...AAGGATCAGTGAAAGAAGGGAAAGTTGGGCGTAAAGATGGTCAGATGTTGCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000113485.9 ENSMUST00000144409.8 |
||
| CDS-3UTR CAA 90 bp | CCGATTCCGTCCACAAAAATAACTCAGGCTGCTTTGCCGAACCATCCTGTCCACTCCCAGGTACTGATCTaGATGGAAGGAAAGAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: PIPSTKITQAALPNHPVHSQVLI*MEGKSR Trigger: CCTGCTCTTTCCTTCCATCAAGATCAGTACCTGGGA...GTGGACAGGATGGTTCGGCAAAGCAGCCTGAGTTATTTTTGTGGACGGAATCGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000124667.2 |
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| CDS GCA 90 bp | GGTTTAAAGTCTGGGTTGAGAGCAACCATCTCTGTAATAAGGGTGTaGCGCTCCTCTTCAAGCTTTTTGCGGGTACGGAACTCTCGAGTG | + |
|
Preference number: 5 (lower is better) Translates to: GLKSGLRATISVIRV*RSSSSFLRVRNSRV Trigger: CACTCGAGAGTTCCGTACCCGCAAAAAGCTTGAAGAGGAGCGGCACACCCTTATTACAGAGATGGTTGCTCTCAACCCAGACTTTAAACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000113485.9 ENSMUST00000113487.8 ENSMUST00000113488.8 ENSMUST00000113489.8 ENSMUST00000131252.8 ENSMUST00000144409.8 ENSMUST00000155973.2 |
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| CDS-3UTR CAA 90 bp | ACAAGGGAAGGATCCTATCTGCAGCAGAAGACCGGGGAGAGCATCTCCTTGGACAGGAGCCCCACAAAATaGATTTCTGGATATTCGTCT | + |
|
Preference number: 5 (lower is better) Translates to: TREGSYLQQKTGESISLDRSPTK*ISGYSS Trigger: AGACGAATATCCAGAAATCAATTTTGTGGGGCTCCT...GTCCAAGGAGATGCTCTCCCCGGTCTTCTGCTGCAGATAGGATCCTTCCCTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000131252.8 |
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| CDS-3UTR CAA 90 bp | GGAGAGGAATGGAGACAAGGGAAGGATCCTATCTGCAGCAGAAGACCGGGGAGAAGGAGCCCCACAAAATaGATTTCTGGATATTCGTCT | + |
|
Preference number: 5 (lower is better) Translates to: GEEWRQGKDPICSRRPGRRSPTK*ISGYSS Trigger: AGACGAATATCCAGAAATCAATTTTGTGGGGCTCCT...TCTCCCCGGTCTTCTGCTGCAGATAGGATCCTTCCCTTGTCTCCATTCCTCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000131252.8 |
||
| CDS-3UTR CAA 90 bp | GGGAAGGAAGGGGCAAAGCAGCAGAACGAAGAACAAGGGACACAAGCCCCAGACTGTTCTACTGCCTTTTaGACATTCTCCATCGTATTG | + |
|
Preference number: 5 (lower is better) Translates to: GKEGAKQQNEEQGTQAPDCSTAF*TFSIVL Trigger: CAATACGATGGAGAATGTCAAAAAGGCAGTAGAACA...GTCTGGGGCTTGTGTCCCTTGTTCTTCGTTCTGCTGCTTTGCCCCTTCCTTCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000131252.8 |
||
| CDS-3UTR CAA 90 bp | ATCTGCAGCAGAAGACCGGGGAGAGCATCTCCTTGGACGGAGTCTGAAGAAAGGTGTTCTACTGCCTTTTaGACATTCTCCATCGTATTG | + |
|
Preference number: 5 (lower is better) Translates to: ICSRRPGRASPWTESEERCSTAF*TFSIVL Trigger: CAATACGATGGAGAATGTCAAAAAGGCAGTAGAACA...CCTTTCTTCAGACTCCGTCCAAGGAGATGCTCTCCCCGGTCTTCTGCTGCAGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000131252.8 |
||
| CDS-3UTR CAA 90 bp | CTGGCAACATCTGACCATCTTTACGCCCAACTTTCCCTTCTTTCACTGATCCTTTCCTCTTCAAGCTTTTaGCGGGTACGGAACTCTCGA | + |
|
Preference number: 5 (lower is better) Translates to: LATSDHLYAQLSLLSLILSSSSF*RVRNSR Trigger: TCGAGAGTTCCGTACCCGCAAAAAGCTTGAAGAGGA...AAGGATCAGTGAAAGAAGGGAAAGTTGGGCGTAAAGATGGTCAGATGTTGCCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113485.9 ENSMUST00000144409.8 |
||
| CDS-3UTR CAA 90 bp | CCAGTGTGTTCCGATTCCGTCCACAAAAATAACTCAGGCTGCTTTGCCGAACCAAGGAGCCCCACAAAATaGATTTCTGGATATTCGTCT | + |
|
Preference number: 5 (lower is better) Translates to: PVCSDSVHKNNSGCFAEPRSPTK*ISGYSS Trigger: AGACGAATATCCAGAAATCAATTTTGTGGGGCTCCT...TGGTTCGGCAAAGCAGCCTGAGTTATTTTTGTGGACGGAATCGGAACACACTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000113487.8 ENSMUST00000131252.8 |
||
| CDS-3UTR CAA 90 bp | AATTTCACAATATGGAGCCAGTGTGTTCCGATTCCGTCCACAAAAATAACTCAGGTGGTGGTGGTCCATTaGGGTTGTGCTGCATGGGAT | + |
|
Preference number: 5 (lower is better) Translates to: NFTIWSQCVPIPSTKITQVVVVH*GCAAWD Trigger: ATCCCATGCAGCACAACCCAAATGGACCACCACCAC...CTGAGTTATTTTTGTGGACGGAATCGGAACACACTGGCTCCATATTGTGAAATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000113487.8 ENSMUST00000124667.2 ENSMUST00000131252.8 |
||
| CDS-3UTR CAA 90 bp | AAAAGAACGCGCATTACACATTATTATCAACATAATCACTCCATGAAGAGGGAACCTCGCTGTTGTAGATaGGTTCAGGGGAAGGGGACC | + |
|
Preference number: 5 (lower is better) Translates to: KRTRITHYYQHNHSMKREPRCCR*VQGKGT Trigger: GGTCCCCTTCCCCTGAACCAATCTACAACAGCGAGG...TTCCCTCTTCATGGAGTGATTATGTTGATAATAATGTGTAATGCGCGTTCTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000113485.9 ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000131252.8 |
||
| CDS-3UTR CAA 90 bp | AAACCAGTGAAAAGAACGCGCATTACACATTATTATCAACATAATCACTCCATGCCTCGCTGTTGTAGATaGGTTCAGGGGAAGGGGACC | + |
|
Preference number: 5 (lower is better) Translates to: KPVKRTRITHYYQHNHSMPRCCR*VQGKGT Trigger: GGTCCCCTTCCCCTGAACCAATCTACAACAGCGAGG...CATGGAGTGATTATGTTGATAATAATGTGTAATGCGCGTTCTTTTCACTGGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000113485.9 ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000131252.8 |
||
| CDS-3UTR CAA 90 bp | AAAAGAACGCGCATTACACATTATTATCAACATAATCACTCCATGAAGAGGGAACATAGTGGGGTTGCCTaGCATCTGAGGGGTTCCTGG | + |
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Preference number: 5 (lower is better) Translates to: KRTRITHYYQHNHSMKREHSGVA*HLRGSW Trigger: CCAGGAACCCCTCAGATGCAAGGCAACCCCACTATG...TTCCCTCTTCATGGAGTGATTATGTTGATAATAATGTGTAATGCGCGTTCTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000131252.8 |
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| CDS-3UTR CAA 90 bp | AAGATGTCAAAGATAAACCACCTACTTATTTTGAATGTGGCTGAAGCCCTTCAACTGTCTTCTGCTCCATaGTGTCTTGGTTCCATCGGC | + |
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Preference number: 5 (lower is better) Translates to: KMSKINHLLILNVAEALQLSSAP*CLGSIG Trigger: GCCGATGGAACCAAGACACAATGGAGCAGAAGACAG...TTGAAGGGCTTCAGCCACATTCAAAATAAGTAGGTGGTTTATCTTTGACATCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113485.9 ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000131252.8 |
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| CDS-3UTR CAA 90 bp | AGAACGCGCATTACACATTATTATCAACATAATCACTCCATGAAGAGGGAAGGATATCGCTCACACGTGTaGCTGGAGGCTTGTAATCTG | + |
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Preference number: 5 (lower is better) Translates to: RTRITHYYQHNHSMKREGYRSHV*LEACNL Trigger: CAGATTACAAGCCTCCAGCAACACGTGTGAGCGATA...TCCTTCCCTCTTCATGGAGTGATTATGTTGATAATAATGTGTAATGCGCGTTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000131252.8 |
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| CDS-3UTR CAA 90 bp | AATTTCACAATATGGAGCCAGTGTGTTCCGATTCCGTCCACAAAAATAACTCAGGTACACACAGTAGTATaGGTAATGCTGCGCGTCTCT | + |
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Preference number: 5 (lower is better) Translates to: NFTIWSQCVPIPSTKITQVHTVV*VMLRVS Trigger: AGAGACGCGCAGCATTACCAATACTACTGTGTGTAC...CTGAGTTATTTTTGTGGACGGAATCGGAACACACTGGCTCCATATTGTGAAATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000113487.8 ENSMUST00000131252.8 |
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| CDS-3UTR CAA 90 bp | AAAAGAACGCGCATTACACATTATTATCAACATAATCACTCCATGAAGAGGGAAGTACACACAGTAGTATaGGTAATGCTGCGCGTCTCT | + |
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Preference number: 5 (lower is better) Translates to: KRTRITHYYQHNHSMKREVHTVV*VMLRVS Trigger: AGAGACGCGCAGCATTACCAATACTACTGTGTGTAC...TTCCCTCTTCATGGAGTGATTATGTTGATAATAATGTGTAATGCGCGTTCTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000131252.8 |
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| CDS GCA 72 bp | GCGGAAAGTCCTCACTCTCATGGCTCGGGCCATCGCTaGCGCGGGGAGGGATCATCATGCCGGCGGAACCAG | + |
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Preference number: 6 (lower is better) Translates to: AESPHSHGSGHR*RGEGSSCRRNQ Trigger: CTGGTTCCGCCGGCATGATGATCCCTCCCCGCGGCAGCGATGGCCCGAGCCATGAGAGTGAGGACTTTCCGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113488.8 |
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| CDS GCA 72 bp | GCGGAAAGTCCTCACTCTCATGGCTCGGGCCATCGCTaGCGCGGGGAGGGATCTTTGCTGCCATGGCAAGGG | + |
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Preference number: 6 (lower is better) Translates to: AESPHSHGSGHR*RGEGSLLPWQG Trigger: CCCTTGCCATGGCAGCAAAGATCCCTCCCCGCGGCAGCGATGGCCCGAGCCATGAGAGTGAGGACTTTCCGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000113487.8 ENSMUST00000113489.8 ENSMUST00000124667.2 ENSMUST00000125516.8 |
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| CDS CCA 72 bp | AGGGTCACCAATGGGCGCGGAAAGTCCTCACTCTCATaGCTCGGGCCATCGCTGCCGCGGGGAGGGATCATC | + |
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Preference number: 6 (lower is better) Translates to: RVTNGRGKSSLS*LGPSLPRGGII Trigger: GATGATCCCTCCCCGCGGCAGCGATGGCCCGAGCCATGAGAGTGAGGACTTTCCGCGCCCATTGGTGACCCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113488.8 |
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| CDS CCA 72 bp | AGGGTCACCAATGGGCGCGGAAAGTCCTCACTCTCATaGCTCGGGCCATCGCTGCCGCGGGGAGGGATCTTT | + |
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Preference number: 6 (lower is better) Translates to: RVTNGRGKSSLS*LGPSLPRGGIF Trigger: AAAGATCCCTCCCCGCGGCAGCGATGGCCCGAGCCATGAGAGTGAGGACTTTCCGCGCCCATTGGTGACCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113489.8 ENSMUST00000125516.8 |
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| CDS CAA 90 bp | GCGATAGACCCCAGAGCCCACAGGCGTACTTCCCAGGTACTGATCTaGATGGAAGGAAAGAGCAGGGACCATTGGAGGAGGGCCATGGTG | + |
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Preference number: 6 (lower is better) Translates to: AIDPRAHRRTSQVLI*MEGKSRDHWRRAMV Trigger: CACCATGGCCCTCCTCCAATGGTCCCTGCTCTTTCCTTCCATCAAGATCAGTACCTGGGAAGTACGCCTGTGGGCTCTGGGGTCTATCGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124667.2 |
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| CDS CAA 72 bp | CCCAGAGCCCACAGGCGTACTTCCCAGGTACTGATCTaGATGGAAGGAAAGAGCAGGGACCATTGGAGGAGG | + |
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Preference number: 6 (lower is better) Translates to: PRAHRRTSQVLI*MEGKSRDHWRR Trigger: CCTCCTCCAATGGTCCCTGCTCTTTCCTTCCATCAAGATCAGTACCTGGGAAGTACGCCTGTGGGCTCTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124667.2 |
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| CDS CAA 90 bp | GCAACCATCTCTGTAATAAGGGTGTGCCGCTCCTCTTCAAGCTTTTaGCGGGTACGGAACTCTCGAGTGTTAAGCCGCTTCCCCTCGCTG | + |
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Preference number: 6 (lower is better) Translates to: ATISVIRVCRSSSSF*RVRNSRVLSRFPSL Trigger: CAGCGAGGGGAAGCGGCTTAACACTCGAGAGTTCCGTACCCGCAAAAAGCTTGAAGAGGAGCGGCACACCCTTATTACAGAGATGGTTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000113485.9 ENSMUST00000113487.8 ENSMUST00000113488.8 ENSMUST00000113489.8 ENSMUST00000131252.8 ENSMUST00000144409.8 ENSMUST00000155973.2 |
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| CDS GCA 72 bp | TCTGGGTTGAGAGCAACCATCTCTGTAATAAGGGTGTaGCGCTCCTCTTCAAGCTTTTTGCGGGTACGGAAC | + |
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Preference number: 6 (lower is better) Translates to: SGLRATISVIRV*RSSSSFLRVRN Trigger: GTTCCGTACCCGCAAAAAGCTTGAAGAGGAGCGGCACACCCTTATTACAGAGATGGTTGCTCTCAACCCAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000113485.9 ENSMUST00000113487.8 ENSMUST00000113488.8 ENSMUST00000113489.8 ENSMUST00000131252.8 ENSMUST00000144409.8 ENSMUST00000155973.2 |
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| CDS CAA 72 bp | TCTGTAATAAGGGTGTGCCGCTCCTCTTCAAGCTTTTaGCGGGTACGGAACTCTCGAGTGTTAAGCCGCTTC | + |
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Preference number: 6 (lower is better) Translates to: SVIRVCRSSSSF*RVRNSRVLSRF Trigger: GAAGCGGCTTAACACTCGAGAGTTCCGTACCCGCAAAAAGCTTGAAGAGGAGCGGCACACCCTTATTACAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000113485.9 ENSMUST00000113487.8 ENSMUST00000113488.8 ENSMUST00000113489.8 ENSMUST00000131252.8 ENSMUST00000144409.8 ENSMUST00000155973.2 |
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| CDS CAA 90 bp | AACTGTAGGCATGCCTGGAATCACTGTCTTCTGCTCCATTGTGTCTaGGTTCCATCGGCTCCTCTTCCTCTTCTTACTTGGGAAGTCCAG | + |
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Preference number: 6 (lower is better) Translates to: NCRHAWNHCLLLHCV*VPSAPLPLLTWEVQ Trigger: CTGGACTTCCCAAGTAAGAAGAGGAAGAGGAGCCGATGGAACCAAGACACAATGGAGCAGAAGACAGTGATTCCAGGCATGCCTACAGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000113485.9 ENSMUST00000113487.8 ENSMUST00000113488.8 ENSMUST00000113489.8 ENSMUST00000131252.8 |
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| CDS CCA 72 bp | ATGCCTGGAATCACTGTCTTCTGCTCCATTGTGTCTTaGTTCCATCGGCTCCTCTTCCTCTTCTTACTTGGG | + |
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Preference number: 6 (lower is better) Translates to: MPGITVFCSIVS*FHRLLFLFLLG Trigger: CCCAAGTAAGAAGAGGAAGAGGAGCCGATGGAACCAAGACACAATGGAGCAGAAGACAGTGATTCCAGGCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000113485.9 ENSMUST00000113487.8 ENSMUST00000113488.8 ENSMUST00000113489.8 ENSMUST00000131252.8 |
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| CDS GCA 72 bp | TTTATCGCTCACACGTGTTGCTGGAGGCTTGTAATCTaGAGGTGGTTTAAAGTCTGGGTTGAGAGCAACCAT | + |
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Preference number: 6 (lower is better) Translates to: FIAHTCCWRLVI*RWFKVWVESNH Trigger: ATGGTTGCTCTCAACCCAGACTTTAAACCACCTGCAGATTACAAGCCTCCAGCAACACGTGTGAGCGATAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000113487.8 ENSMUST00000113488.8 ENSMUST00000113489.8 ENSMUST00000131252.8 ENSMUST00000155973.2 |
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| CDS GCA 72 bp | GTCTTGGGGGATCATTACTTTATCGCTCACACGTGTTaGTGGAGGCTTGTAATCTGCAGGTGGTTTAAAGTC | + |
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Preference number: 6 (lower is better) Translates to: VLGDHYFIAHTC*WRLVICRWFKV Trigger: GACTTTAAACCACCTGCAGATTACAAGCCTCCAGCAACACGTGTGAGCGATAAAGTAATGATCCCCCAAGAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000113487.8 ENSMUST00000113488.8 ENSMUST00000113489.8 ENSMUST00000131252.8 ENSMUST00000155973.2 |
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| CDS CCA 72 bp | TGCTGGAGGCTTGTAATCTGCAGGTGGTTTAAAGTCTaGGTTGAGAGCAACCATCTCTGTAATAAGGGTGTG | + |
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Preference number: 6 (lower is better) Translates to: CWRLVICRWFKV*VESNHLCNKGV Trigger: CACACCCTTATTACAGAGATGGTTGCTCTCAACCCAGACTTTAAACCACCTGCAGATTACAAGCCTCCAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000113485.9 ENSMUST00000113487.8 ENSMUST00000113488.8 ENSMUST00000113489.8 ENSMUST00000131252.8 ENSMUST00000144409.8 ENSMUST00000155973.2 |
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