Pregenerated sensors for SETMAR (Mus musculus)
Ensembl gene IDs: ENSMUSG00000034639Ensembl transcript IDs: ENSMUST00000049246.7, ENSMUST00000138140.3
Found 104 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TCTAAGGGGCCATATATAGTGAACTGTCATAGGGCAGGAAAGTGGTaGATGACTGGGCCCCACAGTAACAAGGCTTTCGTGGTGGGCTAC | + |
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Preference number: 1 (lower is better) Translates to: SKGPYIVNCHRAGKW*MTGPHSNKAFVVGY Trigger: GTAGCCCACCACGAAAGCCTTGTTACTGTGGGGCCCAGTCATGCACCACTTTCCTGCCCTATGACAGTTCACTATATATGGCCCCTTAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000138140.3 |
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| 3UTR GCA 90 bp | CATGGCGAAGACAAGAGCAAGTGCCAGGGACACATGGAGTTTCGATaGAAGCACATCCAGGGAAGGTTATTTGTGTGGGGTCAATGTCTG | + |
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Preference number: 1 (lower is better) Translates to: HGEDKSKCQGHMEFR*KHIQGRLFVWGQCL Trigger: CAGACATTGACCCCACACAAATAACCTTCCCTGGATGTGCTTGCATCGAAACTCCATGTGTCCCTGGCACTTGCTCTTGTCTTCGCCATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138140.3 |
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| 3UTR GCA 90 bp | GAAGGAAGTGTAGGCCATTCTGGACCACCCTATTTCTGCAGCGCATaGCACACTGGCACAGAACATTGCATTCAAAAACTGGCTTGGCGT | + |
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Preference number: 1 (lower is better) Translates to: EGSVGHSGPPYFCSA*HTGTEHCIQKLAWR Trigger: ACGCCAAGCCAGTTTTTGAATGCAATGTTCTGTGCCAGTGTGGCATGCGCTGCAGAAATAGGGTGGTCCAGAATGGCCTACACTTCCTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000138140.3 |
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| 3UTR GCA 90 bp | ACACCTGGAGAAGGAAGTGTAGGCCATTCTGGACCACCCTATTTCTaGAGCGCATGCCACACTGGCACAGAACATTGCATTCAAAAACTG | + |
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Preference number: 1 (lower is better) Translates to: TPGEGSVGHSGPPYF*SACHTGTEHCIQKL Trigger: CAGTTTTTGAATGCAATGTTCTGTGCCAGTGTGGCATGCGCTGCAGAAATAGGGTGGTCCAGAATGGCCTACACTTCCTTCTCCAGGTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000138140.3 |
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| 3UTR CCA 90 bp | TGTAGGCCATTCTGGACCACCCTATTTCTGCAGCGCATGCCACACTaGCACAGAACATTGCATTCAAAAACTGGCTTGGCGTACTTTCCT | + |
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Preference number: 1 (lower is better) Translates to: CRPFWTTLFLQRMPH*HRTLHSKTGLAYFP Trigger: AGGAAAGTACGCCAAGCCAGTTTTTGAATGCAATGTTCTGTGCCAGTGTGGCATGCGCTGCAGAAATAGGGTGGTCCAGAATGGCCTACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000138140.3 |
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| 3UTR TCA 90 bp | AAGGTTATTTGTGTGGGGTCAATGTCTGCTCCAGGTCCAGCAACATaGTCAGGAGTATACACTTTAGCTGTGCAGGGATGTCCTACAGGG | + |
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Preference number: 1 (lower is better) Translates to: KVICVGSMSAPGPAT*SGVYTLAVQGCPTG Trigger: CCCTGTAGGACATCCCTGCACAGCTAAAGTGTATACTCCTGATCATGTTGCTGGACCTGGAGCAGACATTGACCCCACACAAATAACCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138140.3 |
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| 3UTR CCA 90 bp | GGCTTTAGGATGGCTGTTCCAACTCCAGCCATCAGGTCTGACTTCTaGTTTCCAAGAAGAAATACAAGGACGATGCCCAAGGATTCATCC | + |
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Preference number: 1 (lower is better) Translates to: GFRMAVPTPAIRSDF*FPRRNTRTMPKDSS Trigger: GGATGAATCCTTGGGCATCGTCCTTGTATTTCTTCTTGGAAACCAGAAGTCAGACCTGATGGCTGGAGTTGGAACAGCCATCCTAAAGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049246.7 ENSMUST00000138140.3 |
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| 3UTR CCA 90 bp | CACATGGAGTTTCGATGCAAGCACATCCAGGGAAGGTTATTTGTGTaGGGTCAATGTCTGCTCCAGGTCCAGCAACATGATCAGGAGTAT | + |
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Preference number: 1 (lower is better) Translates to: HMEFRCKHIQGRLFV*GQCLLQVQQHDQEY Trigger: ATACTCCTGATCATGTTGCTGGACCTGGAGCAGACATTGACCCCACACAAATAACCTTCCCTGGATGTGCTTGCATCGAAACTCCATGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138140.3 |
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| 3UTR CCA 90 bp | GTAGTTATTCTCATGGCGAAGACAAGAGCAAGTGCCAGGGACACATaGAGTTTCGATGCAAGCACATCCAGGGAAGGTTATTTGTGTGGG | + |
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Preference number: 1 (lower is better) Translates to: VVILMAKTRASARDT*SFDASTSREGYLCG Trigger: CCCACACAAATAACCTTCCCTGGATGTGCTTGCATCGAAACTCCATGTGTCCCTGGCACTTGCTCTTGTCTTCGCCATGAGAATAACTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138140.3 |
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| 3UTR GCA 90 bp | GATGCAAGCACATCCAGGGAAGGTTATTTGTGTGGGGTCAATGTCTaGTCCAGGTCCAGCAACATGATCAGGAGTATACACTTTAGCTGT | + |
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Preference number: 1 (lower is better) Translates to: DASTSREGYLCGVNV*SRSSNMIRSIHFSC Trigger: ACAGCTAAAGTGTATACTCCTGATCATGTTGCTGGACCTGGAGCAGACATTGACCCCACACAAATAACCTTCCCTGGATGTGCTTGCATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138140.3 |
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| 3UTR CCA 90 bp | GTTCTTCTCCTGGCAAAATATCTTTGGCTGCGAAAAGTGCCAGCTTaGGTACCATTGAGTCAATTCGGACAGGAATCATCAACAGATTTG | + |
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Preference number: 1 (lower is better) Translates to: VLLLAKYLWLRKVPA*VPLSQFGQESSTDL Trigger: CAAATCTGTTGATGATTCCTGTCCGAATTGACTCAATGGTACCCAAGCTGGCACTTTTCGCAGCCAAAGATATTTTGCCAGGAGAAGAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000138140.3 |
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| 3UTR CCA 90 bp | TTCCTGAATAGTCGTAAGAGAGTTCTTCTCCTGGCAAAATATCTTTaGCTGCGAAAAGTGCCAGCTTGGGTACCATTGAGTCAATTCGGA | + |
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Preference number: 1 (lower is better) Translates to: FLNSRKRVLLLAKYL*LRKVPAWVPLSQFG Trigger: TCCGAATTGACTCAATGGTACCCAAGCTGGCACTTTTCGCAGCCAAAGATATTTTGCCAGGAGAAGAACTCTCTTACGACTATTCAGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000138140.3 |
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| 3UTR TCA 90 bp | TGGCAAAATATCTTTGGCTGCGAAAAGTGCCAGCTTGGGTACCATTaGGTCAATTCGGACAGGAATCATCAACAGATTTGGTTCACAAGA | + |
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Preference number: 1 (lower is better) Translates to: WQNIFGCEKCQLGYH*VNSDRNHQQIWFTR Trigger: TCTTGTGAACCAAATCTGTTGATGATTCCTGTCCGAATTGACTCAATGGTACCCAAGCTGGCACTTTTCGCAGCCAAAGATATTTTGCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000138140.3 |
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| 3UTR GCA 90 bp | CCATCAGGTCTGACTTCTGGTTTCCAAGAAGAAATACAAGGACGATaGCCAAGGATTCATCCTGTTTGCTTGTATCCTGTTAGTTACAAC | + |
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Preference number: 1 (lower is better) Translates to: PSGLTSGFQEEIQGR*PRIHPVCLYPVSYN Trigger: GTTGTAACTAACAGGATACAAGCAAACAGGATGAATCCTTGGGCATCGTCCTTGTATTTCTTCTTGGAAACCAGAAGTCAGACCTGATGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049246.7 ENSMUST00000138140.3 |
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| 3UTR TCA 90 bp | TATCTTTTCTTTGTCTTTACTACTTACTTGGTTAAGGAATCTTCCTaGATAGTCGTAAGAGAGTTCTTCTCCTGGCAAAATATCTTTGGC | + |
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Preference number: 1 (lower is better) Translates to: YLFFVFTTYLVKESS*IVVREFFSWQNIFG Trigger: GCCAAAGATATTTTGCCAGGAGAAGAACTCTCTTACGACTATTCAGGAAGATTCCTTAACCAAGTAAGTAGTAAAGACAAAGAAAAGATA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000138140.3 |
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| 3UTR-3UTR TCA 90 bp | GGAAGTGTAGGCCATTCTGGACCACCCTATTTCTGCAGCGCATGCCACACTGGCGATGTCCTACAGGGATaGAAGAGATGCTCCTGTCCA | + |
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Preference number: 2 (lower is better) Translates to: GSVGHSGPPYFCSACHTGDVLQG*KRCSCP Trigger: TGGACAGGAGCATCTCTTTCATCCCTGTAGGACATC...GCCAGTGTGGCATGCGCTGCAGAAATAGGGTGGTCCAGAATGGCCTACACTTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138140.3 |
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| 3UTR-3UTR GCA 90 bp | AGTGCAGAGGCATCCATCCAGTCAGGACTAGCAGTATTTTTCTCCAGTGCCAGAAGGGCAGGAAAGTGGTaGATGACTGGGCCCCACAGT | + |
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Preference number: 2 (lower is better) Translates to: SAEASIQSGLAVFFSSARRAGKW*MTGPHS Trigger: ACTGTGGGGCCCAGTCATGCACCACTTTCCTGCCCT...TCTGGCACTGGAGAAAAATACTGCTAGTCCTGACTGGATGGATGCCTCTGCACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000138140.3 |
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| 3UTR-3UTR GCA 90 bp | GCCAGGGTCGTCCTGGCTTTAGGATGGCTGTTCCAACTCCAGCCATCAGGTCTGACTGGCACAGAACATTaGATTCAAAAACTGGCTTGG | + |
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Preference number: 2 (lower is better) Translates to: ARVVLALGWLFQLQPSGLTGTEH*IQKLAW Trigger: CCAAGCCAGTTTTTGAATGCAATGTTCTGTGCCAGT...CAGACCTGATGGCTGGAGTTGGAACAGCCATCCTAAAGCCAGGACGACCCTGGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000138140.3 |
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| 3UTR CAA 90 bp | AGGGACACATGGAGTTTCGATGCAAGCACATCCAGGGAAGGTTATTaGTGTGGGGTCAATGTCTGCTCCAGGTCCAGCAACATGATCAGG | + |
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Preference number: 2 (lower is better) Translates to: RDTWSFDASTSREGY*CGVNVCSRSSNMIR Trigger: CCTGATCATGTTGCTGGACCTGGAGCAGACATTGACCCCACACAAATAACCTTCCCTGGATGTGCTTGCATCGAAACTCCATGTGTCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138140.3 |
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| 3UTR CAA 90 bp | TGGACCACCCTATTTCTGCAGCGCATGCCACACTGGCACAGAACATaGCATTCAAAAACTGGCTTGGCGTACTTTCCTTCGGATCCCACA | + |
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Preference number: 2 (lower is better) Translates to: WTTLFLQRMPHWHRT*HSKTGLAYFPSDPT Trigger: TGTGGGATCCGAAGGAAAGTACGCCAAGCCAGTTTTTGAATGCAATGTTCTGTGCCAGTGTGGCATGCGCTGCAGAAATAGGGTGGTCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000138140.3 |
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| 3UTR-3UTR TCA 90 bp | GTCGTCCTGGCTTTAGGATGGCTGTTCCAACTCCAGCCATCAGGTCTGACTTCTTGGGAGAGAGTGTATTaGTGGACATTCTATCTGGGC | + |
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Preference number: 2 (lower is better) Translates to: VVLALGWLFQLQPSGLTSWERVY*WTFYLG Trigger: GCCCAGATAGAATGTCCATCAATACACTCTCTCCCA...AGAAGTCAGACCTGATGGCTGGAGTTGGAACAGCCATCCTAAAGCCAGGACGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049246.7 ENSMUST00000138140.3 |
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| 3UTR-3UTR TCA 90 bp | GGCATCCATCCAGTCAGGACTAGCAGTATTTTTCTCCAGTGCCAGATACCTTGTATGCTTGGCTCCCTCTaGTTTCTGTCTGCAAAGGGG | + |
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Preference number: 2 (lower is better) Translates to: GIHPVRTSSIFLQCQIPCMLGSL*FLSAKG Trigger: CCCCTTTGCAGACAGAAATCAGAGGGAGCCAAGCAT...ACAAGGTATCTGGCACTGGAGAAAAATACTGCTAGTCCTGACTGGATGGATGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049246.7 ENSMUST00000138140.3 |
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| 3UTR-3UTR TCA 90 bp | TGCACTTCAGAGAATCCTAACACCTCCCCAGCATACTCACAGACAAATCTTCCCATGCTTGGCTCCCTCTaGTTTCTGTCTGCAAAGGGG | + |
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Preference number: 2 (lower is better) Translates to: CTSENPNTSPAYSQTNLPMLGSL*FLSAKG Trigger: CCCCTTTGCAGACAGAAATCAGAGGGAGCCAAGCAT...GGGAAGATTTGTCTGTGAGTATGCTGGGGAGGTGTTAGGATTCTCTGAAGTGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138140.3 |
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| 3UTR-3UTR TCA 90 bp | AGTGCAGAGGCATCCATCCAGTCAGGACTAGCAGTATTTTTCTCCAGTGCCAGATCTGGGCCAAATTGCTaGGTTGAATGTGGGAACCTG | + |
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Preference number: 2 (lower is better) Translates to: SAEASIQSGLAVFFSSARSGPNC*VECGNL Trigger: CAGGTTCCCACATTCAACTCAGCAATTTGGCCCAGA...TCTGGCACTGGAGAAAAATACTGCTAGTCCTGACTGGATGGATGCCTCTGCACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049246.7 ENSMUST00000138140.3 |
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| 3UTR-3UTR TCA 90 bp | AGTGCAGAGGCATCCATCCAGTCAGGACTAGCAGTATTTTTCTCCAGTGCCAGATTGATTTGCTCTGAATaGCCCTTTGCCAGGGTCGTC | + |
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Preference number: 2 (lower is better) Translates to: SAEASIQSGLAVFFSSARLICSE*PFARVV Trigger: GACGACCCTGGCAAAGGGTCATTCAGAGCAAATCAA...TCTGGCACTGGAGAAAAATACTGCTAGTCCTGACTGGATGGATGCCTCTGCACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049246.7 ENSMUST00000138140.3 |
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| 3UTR CAA 90 bp | CAGCGCATGCCACACTGGCACAGAACATTGCATTCAAAAACTGGCTaGGCGTACTTTCCTTCGGATCCCACATCCCTAAGGCATAAATTG | + |
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Preference number: 2 (lower is better) Translates to: QRMPHWHRTLHSKTG*AYFPSDPTSLRHKL Trigger: CAATTTATGCCTTAGGGATGTGGGATCCGAAGGAAAGTACGCCAAGCCAGTTTTTGAATGCAATGTTCTGTGCCAGTGTGGCATGCGCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000138140.3 |
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| 3UTR-3UTR TCA 90 bp | AGTTATTCTCATGGCGAAGACAAGAGCAAGTGCCAGGGACACATGGAGTTTCGAACAAGATGCGGACTATaGGGTAGCCTTCCCTTGAGA | + |
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Preference number: 2 (lower is better) Translates to: SYSHGEDKSKCQGHMEFRTRCGL*GSLPLR Trigger: TCTCAAGGGAAGGCTACCTCATAGTCCGCATCTTGT...TCGAAACTCCATGTGTCCCTGGCACTTGCTCTTGTCTTCGCCATGAGAATAACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138140.3 |
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| 3UTR-3UTR CCA 90 bp | CAGCCATCAGGTCTGACTTCTGGTTTCCAAGAAGAAATACAAGGACGATGCCCAAGTGCCAGGGACACATaGAGTTTCGATGCAAGCACA | + |
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Preference number: 2 (lower is better) Translates to: QPSGLTSGFQEEIQGRCPSARDT*SFDAST Trigger: TGTGCTTGCATCGAAACTCCATGTGTCCCTGGCACT...TGGGCATCGTCCTTGTATTTCTTCTTGGAAACCAGAAGTCAGACCTGATGGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138140.3 |
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| 3UTR-3UTR GCA 90 bp | TGGGTACCATTGAGTCAATTCGGACAGGAATCATCAACAGATTTGGTTCACAAGCTCCTCACCTACAAGTaGAGAGGCATCCATCCAGTC | + |
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Preference number: 2 (lower is better) Translates to: WVPLSQFGQESSTDLVHKLLTYK*RGIHPV Trigger: GACTGGATGGATGCCTCTGCACTTGTAGGTGAGGAG...CTTGTGAACCAAATCTGTTGATGATTCCTGTCCGAATTGACTCAATGGTACCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138140.3 |
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| 3UTR-3UTR GCA 90 bp | TGCCACACTGGCACAGAACATTGCATTCAAAAACTGGCTTGGCGTACTTTCCTTGAAGACAAGAGCAAGTaGCAGGGACACATGGAGTTT | + |
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Preference number: 2 (lower is better) Translates to: CHTGTEHCIQKLAWRTFLEDKSK*QGHMEF Trigger: AAACTCCATGTGTCCCTGGCACTTGCTCTTGTCTTC...AAGGAAAGTACGCCAAGCCAGTTTTTGAATGCAATGTTCTGTGCCAGTGTGGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000138140.3 |
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| 3UTR-3UTR TCA 90 bp | GGATTCATCCTGTTTGCTTGTATCCTGTTAGTTACAACATACCCACTTACCCACTCCAGCCATCAGGTCTaGCTTCTGGTTTCCAAGAAG | + |
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Preference number: 2 (lower is better) Translates to: GFILFACILLVTTYPLTHSSHQV*LLVSKK Trigger: CTTCTTGGAAACCAGAAGTCAGACCTGATGGCTGGA...GTGGGTAAGTGGGTATGTTGTAACTAACAGGATACAAGCAAACAGGATGAATCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049246.7 ENSMUST00000138140.3 |
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| 3UTR CAA 90 bp | CTGGCAAAATATCTTTGGCTGCGAAAAGTGCCAGCTTGGGTACCATaGAGTCAATTCGGACAGGAATCATCAACAGATTTGGTTCACAAG | + |
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Preference number: 2 (lower is better) Translates to: LAKYLWLRKVPAWVP*SQFGQESSTDLVHK Trigger: CTTGTGAACCAAATCTGTTGATGATTCCTGTCCGAATTGACTCAATGGTACCCAAGCTGGCACTTTTCGCAGCCAAAGATATTTTGCCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000138140.3 |
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| 3UTR-3UTR TCA 90 bp | TTCACAAGAATGGTTGAGGAATCTCCCAATATTTCCTATGTAGGTAGGGTCGACCTTGTTGATTTGCTCTaGATGACCCTTTGCCAGGGT | + |
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Preference number: 2 (lower is better) Translates to: FTRMVEESPNISYVGRVDLVDLL*MTLCQG Trigger: ACCCTGGCAAAGGGTCATTCAGAGCAAATCAACAAG...GTCGACCCTACCTACATAGGAAATATTGGGAGATTCCTCAACCATTCTTGTGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138140.3 |
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| 3UTR-3UTR CCA 90 bp | TACAAAGACAAGTATTCTGGGAGAGAGTGTATTGATGGACATTCTATCTGGGCCGGAAGGTTATTTGTGTaGGGTCAATGTCTGCTCCAG | + |
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Preference number: 2 (lower is better) Translates to: YKDKYSGRECIDGHSIWAGRLFV*GQCLLQ Trigger: CTGGAGCAGACATTGACCCCACACAAATAACCTTCC...GGCCCAGATAGAATGTCCATCAATACACTCTCTCCCAGAATACTTGTCTTTGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138140.3 |
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| 3UTR-3UTR CCA 90 bp | TGCAGAGGCATCCATCCAGTCAGGACTAGCAGTATTTTTCTCCAGTGCCAGATAATTGCATTCAAAAACTaGCTTGGCGTACTTTCCTTC | + |
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Preference number: 2 (lower is better) Translates to: CRGIHPVRTSSIFLQCQIIAFKN*LGVLSF Trigger: GAAGGAAAGTACGCCAAGCCAGTTTTTGAATGCAAT...TATCTGGCACTGGAGAAAAATACTGCTAGTCCTGACTGGATGGATGCCTCTGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000138140.3 |
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| 3UTR CAA 90 bp | AGTTCTTCTCCTGGCAAAATATCTTTGGCTGCGAAAAGTGCCAGCTaGGGTACCATTGAGTCAATTCGGACAGGAATCATCAACAGATTT | + |
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Preference number: 2 (lower is better) Translates to: SSSPGKISLAAKSAS*GTIESIRTGIINRF Trigger: AAATCTGTTGATGATTCCTGTCCGAATTGACTCAATGGTACCCAAGCTGGCACTTTTCGCAGCCAAAGATATTTTGCCAGGAGAAGAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000138140.3 |
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| 3UTR-3UTR TCA 90 bp | CTTAGCTACAAAGACAAGTATTCTGGGAGAGAGTGTATTGATGGACATTCTATCACAAGATGCGGACTATaGGGTAGCCTTCCCTTGAGA | + |
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Preference number: 2 (lower is better) Translates to: LSYKDKYSGRECIDGHSITRCGL*GSLPLR Trigger: TCTCAAGGGAAGGCTACCTCATAGTCCGCATCTTGT...GATAGAATGTCCATCAATACACTCTCTCCCAGAATACTTGTCTTTGTAGCTAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049246.7 ENSMUST00000138140.3 |
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| 3UTR-3UTR TCA 90 bp | CTTAGCTACAAAGACAAGTATTCTGGGAGAGAGTGTATTGATGGACATTCTATCTCCAGCCATCAGGTCTaGCTTCTGGTTTCCAAGAAG | + |
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Preference number: 2 (lower is better) Translates to: LSYKDKYSGRECIDGHSISSHQV*LLVSKK Trigger: CTTCTTGGAAACCAGAAGTCAGACCTGATGGCTGGA...GATAGAATGTCCATCAATACACTCTCTCCCAGAATACTTGTCTTTGTAGCTAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049246.7 ENSMUST00000138140.3 |
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| 3UTR CAA 90 bp | CAAGAAGAAATACAAGGACGATGCCCAAGGATTCATCCTGTTTGCTaGTATCCTGTTAGTTACAACATACCCACTTACCCACACTTAGCT | + |
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Preference number: 2 (lower is better) Translates to: QEEIQGRCPRIHPVC*YPVSYNIPTYPHLA Trigger: AGCTAAGTGTGGGTAAGTGGGTATGTTGTAACTAACAGGATACAAGCAAACAGGATGAATCCTTGGGCATCGTCCTTGTATTTCTTCTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049246.7 ENSMUST00000138140.3 |
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| 3UTR-3UTR TCA 90 bp | CTTAGCTACAAAGACAAGTATTCTGGGAGAGAGTGTATTGATGGACATTCTATCCTTGTTGATTTGCTCTaGATGACCCTTTGCCAGGGT | + |
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Preference number: 2 (lower is better) Translates to: LSYKDKYSGRECIDGHSILVDLL*MTLCQG Trigger: ACCCTGGCAAAGGGTCATTCAGAGCAAATCAACAAG...GATAGAATGTCCATCAATACACTCTCTCCCAGAATACTTGTCTTTGTAGCTAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049246.7 ENSMUST00000138140.3 |
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| 3UTR-3UTR CCA 90 bp | TACAAAGACAAGTATTCTGGGAGAGAGTGTATTGATGGACATTCTATCTGGGCCTTATCACTTAATGCTTaGCTCCCTCTGATTTCTGTC | + |
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Preference number: 2 (lower is better) Translates to: YKDKYSGRECIDGHSIWALSLNA*LPLISV Trigger: GACAGAAATCAGAGGGAGCCAAGCATTAAGTGATAA...GGCCCAGATAGAATGTCCATCAATACACTCTCTCCCAGAATACTTGTCTTTGTA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049246.7 ENSMUST00000138140.3 |
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| 3UTR-3UTR CAA 90 bp | GCCAGGGTCGTCCTGGCTTTAGGATGGCTGTTCCAACTCCAGCCATCAGGTCTGCTGGGAGAGAGTGTATaGATGGACATTCTATCTGGG | + |
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Preference number: 3 (lower is better) Translates to: ARVVLALGWLFQLQPSGLLGESV*MDILSG Trigger: CCCAGATAGAATGTCCATCAATACACTCTCTCCCAG...CAGACCTGATGGCTGGAGTTGGAACAGCCATCCTAAAGCCAGGACGACCCTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049246.7 ENSMUST00000138140.3 |
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| 3UTR-3UTR CAA 90 bp | CAGCCATCAGGTCTGACTTCTGGTTTCCAAGAAGAAATACAAGGACGATGCCCAGGGCTGGGCAACCCCTaGTCTTACAGGGATGAACAA | + |
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Preference number: 3 (lower is better) Translates to: QPSGLTSGFQEEIQGRCPGLGNP*SYRDEQ Trigger: TTGTTCATCCCTGTAAGACAAGGGGTTGCCCAGCCC...TGGGCATCGTCCTTGTATTTCTTCTTGGAAACCAGAAGTCAGACCTGATGGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049246.7 ENSMUST00000138140.3 |
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| 3UTR TCA 72 bp | ATTGATGGACATTCTATCTGGGCCAAATTGCTGAGTTaGATGTGGGAACCTGGCAGGGCTGGGCAACCCCTT | + |
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Preference number: 3 (lower is better) Translates to: IDGHSIWAKLLS*MWEPGRAGQPL Trigger: AAGGGGTTGCCCAGCCCTGCCAGGTTCCCACATTCAACTCAGCAATTTGGCCCAGATAGAATGTCCATCAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049246.7 ENSMUST00000138140.3 |
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| 3UTR GCA 72 bp | GACAAGAGCAAGTGCCAGGGACACATGGAGTTTCGATaGAAGCACATCCAGGGAAGGTTATTTGTGTGGGGT | + |
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Preference number: 3 (lower is better) Translates to: DKSKCQGHMEFR*KHIQGRLFVWG Trigger: ACCCCACACAAATAACCTTCCCTGGATGTGCTTGCATCGAAACTCCATGTGTCCCTGGCACTTGCTCTTGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138140.3 |
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| 3UTR GCA 72 bp | GAAGGAAGTGTAGGCCATTCTGGACCACCCTATTTCTaGAGCGCATGCCACACTGGCACAGAACATTGCATT | + |
|
Preference number: 3 (lower is better) Translates to: EGSVGHSGPPYF*SACHTGTEHCI Trigger: AATGCAATGTTCTGTGCCAGTGTGGCATGCGCTGCAGAAATAGGGTGGTCCAGAATGGCCTACACTTCCTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138140.3 |
||
| 3UTR CCA 72 bp | CTCATGGCGAAGACAAGAGCAAGTGCCAGGGACACATaGAGTTTCGATGCAAGCACATCCAGGGAAGGTTAT | + |
|
Preference number: 3 (lower is better) Translates to: LMAKTRASARDT*SFDASTSREGY Trigger: ATAACCTTCCCTGGATGTGCTTGCATCGAAACTCCATGTGTCCCTGGCACTTGCTCTTGTCTTCGCCATGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138140.3 |
||
| 3UTR CCA 72 bp | TTCTGGACCACCCTATTTCTGCAGCGCATGCCACACTaGCACAGAACATTGCATTCAAAAACTGGCTTGGCG | + |
|
Preference number: 3 (lower is better) Translates to: FWTTLFLQRMPH*HRTLHSKTGLA Trigger: CGCCAAGCCAGTTTTTGAATGCAATGTTCTGTGCCAGTGTGGCATGCGCTGCAGAAATAGGGTGGTCCAGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000138140.3 |
||
| 3UTR CCA 72 bp | GGGCCATATATAGTGAACTGTCATAGGGCAGGAAAGTaGTGCATGACTGGGCCCCACAGTAACAAGGCTTTC | + |
|
Preference number: 3 (lower is better) Translates to: GPYIVNCHRAGK*CMTGPHSNKAF Trigger: GAAAGCCTTGTTACTGTGGGGCCCAGTCATGCACCACTTTCCTGCCCTATGACAGTTCACTATATATGGCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138140.3 |
||
| 3UTR TCA 72 bp | AGTGTATTGATGGACATTCTATCTGGGCCAAATTGCTaGGTTGAATGTGGGAACCTGGCAGGGCTGGGCAAC | + |
|
Preference number: 3 (lower is better) Translates to: SVLMDILSGPNC*VECGNLAGLGN Trigger: GTTGCCCAGCCCTGCCAGGTTCCCACATTCAACTCAGCAATTTGGCCCAGATAGAATGTCCATCAATACACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049246.7 ENSMUST00000138140.3 |
||
| 3UTR TCA 72 bp | TGTGTGGGGTCAATGTCTGCTCCAGGTCCAGCAACATaGTCAGGAGTATACACTTTAGCTGTGCAGGGATGT | + |
|
Preference number: 3 (lower is better) Translates to: CVGSMSAPGPAT*SGVYTLAVQGC Trigger: ACATCCCTGCACAGCTAAAGTGTATACTCCTGATCATGTTGCTGGACCTGGAGCAGACATTGACCCCACACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138140.3 |
||
| 3UTR GCA 72 bp | GTAGGCCATTCTGGACCACCCTATTTCTGCAGCGCATaGCACACTGGCACAGAACATTGCATTCAAAAACTG | + |
|
Preference number: 3 (lower is better) Translates to: VGHSGPPYFCSA*HTGTEHCIQKL Trigger: CAGTTTTTGAATGCAATGTTCTGTGCCAGTGTGGCATGCGCTGCAGAAATAGGGTGGTCCAGAATGGCCTAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000138140.3 |
||
| 3UTR GCA 72 bp | CCATATATAGTGAACTGTCATAGGGCAGGAAAGTGGTaGATGACTGGGCCCCACAGTAACAAGGCTTTCGTG | + |
|
Preference number: 3 (lower is better) Translates to: PYIVNCHRAGKW*MTGPHSNKAFV Trigger: CACGAAAGCCTTGTTACTGTGGGGCCCAGTCATGCACCACTTTCCTGCCCTATGACAGTTCACTATATATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138140.3 |
||
| 3UTR GCA 72 bp | ACATCCAGGGAAGGTTATTTGTGTGGGGTCAATGTCTaGTCCAGGTCCAGCAACATGATCAGGAGTATACAC | + |
|
Preference number: 3 (lower is better) Translates to: TSREGYLCGVNV*SRSSNMIRSIH Trigger: GTGTATACTCCTGATCATGTTGCTGGACCTGGAGCAGACATTGACCCCACACAAATAACCTTCCCTGGATGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138140.3 |
||
| 3UTR CCA 72 bp | ATGGCTGTTCCAACTCCAGCCATCAGGTCTGACTTCTaGTTTCCAAGAAGAAATACAAGGACGATGCCCAAG | + |
|
Preference number: 3 (lower is better) Translates to: MAVPTPAIRSDF*FPRRNTRTMPK Trigger: CTTGGGCATCGTCCTTGTATTTCTTCTTGGAAACCAGAAGTCAGACCTGATGGCTGGAGTTGGAACAGCCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049246.7 ENSMUST00000138140.3 |
||
| 3UTR CCA 72 bp | TTTCGATGCAAGCACATCCAGGGAAGGTTATTTGTGTaGGGTCAATGTCTGCTCCAGGTCCAGCAACATGAT | + |
|
Preference number: 3 (lower is better) Translates to: FRCKHIQGRLFV*GQCLLQVQQHD Trigger: ATCATGTTGCTGGACCTGGAGCAGACATTGACCCCACACAAATAACCTTCCCTGGATGTGCTTGCATCGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138140.3 |
||
| 3UTR-3UTR CAA 90 bp | ACTCCAGCCATCAGGTCTGACTTCTGGTTTCCAAGAAGAAATACAAGGACGATGTCCCTTGAGAGTAGTTaGCTTGTAGGAGACGAACCC | + |
|
Preference number: 3 (lower is better) Translates to: TPAIRSDFWFPRRNTRTMSLESS*LVGDEP Trigger: GGGTTCGTCTCCTACAAGCAAACTACTCTCAAGGGA...CATCGTCCTTGTATTTCTTCTTGGAAACCAGAAGTCAGACCTGATGGCTGGAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049246.7 ENSMUST00000138140.3 |
||
| 3UTR TCA 72 bp | ATCTTTGGCTGCGAAAAGTGCCAGCTTGGGTACCATTaGGTCAATTCGGACAGGAATCATCAACAGATTTGG | + |
|
Preference number: 3 (lower is better) Translates to: IFGCEKCQLGYH*VNSDRNHQQIW Trigger: CCAAATCTGTTGATGATTCCTGTCCGAATTGACTCAATGGTACCCAAGCTGGCACTTTTCGCAGCCAAAGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138140.3 |
||
| 3UTR CCA 72 bp | CTGGCAAAATATCTTTGGCTGCGAAAAGTGCCAGCTTaGGTACCATTGAGTCAATTCGGACAGGAATCATCA | + |
|
Preference number: 3 (lower is better) Translates to: LAKYLWLRKVPA*VPLSQFGQESS Trigger: TGATGATTCCTGTCCGAATTGACTCAATGGTACCCAAGCTGGCACTTTTCGCAGCCAAAGATATTTTGCCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000138140.3 |
||
| 3UTR CCA 72 bp | AGTCGTAAGAGAGTTCTTCTCCTGGCAAAATATCTTTaGCTGCGAAAAGTGCCAGCTTGGGTACCATTGAGT | + |
|
Preference number: 3 (lower is better) Translates to: SRKRVLLLAKYL*LRKVPAWVPLS Trigger: ACTCAATGGTACCCAAGCTGGCACTTTTCGCAGCCAAAGATATTTTGCCAGGAGAAGAACTCTCTTACGACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000138140.3 |
||
| 3UTR-3UTR CAA 90 bp | GTCGTAAGAGAGTTCTTCTCCTGGCAAAATATCTTTGGCTGCGAAAAGTGCCAGCAGACAAATCTTCCCTaGGGTATAAATTCCAAAGTC | + |
|
Preference number: 3 (lower is better) Translates to: VVREFFSWQNIFGCEKCQQTNLP*GINSKV Trigger: GACTTTGGAATTTATACCCAAGGGAAGATTTGTCTG...CTGGCACTTTTCGCAGCCAAAGATATTTTGCCAGGAGAAGAACTCTCTTACGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000138140.3 |
||
| 3UTR GCA 72 bp | CTGACTTCTGGTTTCCAAGAAGAAATACAAGGACGATaGCCAAGGATTCATCCTGTTTGCTTGTATCCTGTT | + |
|
Preference number: 3 (lower is better) Translates to: LTSGFQEEIQGR*PRIHPVCLYPV Trigger: AACAGGATACAAGCAAACAGGATGAATCCTTGGGCATCGTCCTTGTATTTCTTCTTGGAAACCAGAAGTCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049246.7 ENSMUST00000138140.3 |
||
| 3UTR-3UTR CAA 90 bp | TGGGTACCATTGAGTCAATTCGGACAGGAATCATCAACAGATTTGGTTCACAAGATTCATCCTGTTTGCTaGTATCCTGTTAGTTACAAC | + |
|
Preference number: 3 (lower is better) Translates to: WVPLSQFGQESSTDLVHKIHPVC*YPVSYN Trigger: GTTGTAACTAACAGGATACAAGCAAACAGGATGAAT...CTTGTGAACCAAATCTGTTGATGATTCCTGTCCGAATTGACTCAATGGTACCCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138140.3 |
||
| 3UTR-3UTR CAA 90 bp | AGCTACAAAGACAAGTATTCTGGGAGAGAGTGTATTGATGGACATTCTATCTGGGGTTCACAAGAATGGTaGAGGAATCTCCCAATATTT | + |
|
Preference number: 3 (lower is better) Translates to: SYKDKYSGRECIDGHSIWGSQEW*RNLPIF Trigger: AAATATTGGGAGATTCCTCAACCATTCTTGTGAACC...CCAGATAGAATGTCCATCAATACACTCTCTCCCAGAATACTTGTCTTTGTAGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138140.3 |
||
| 3UTR TCA 72 bp | TTTGTCTTTACTACTTACTTGGTTAAGGAATCTTCCTaGATAGTCGTAAGAGAGTTCTTCTCCTGGCAAAAT | + |
|
Preference number: 3 (lower is better) Translates to: FVFTTYLVKESS*IVVREFFSWQN Trigger: ATTTTGCCAGGAGAAGAACTCTCTTACGACTATTCAGGAAGATTCCTTAACCAAGTAAGTAGTAAAGACAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138140.3 |
||
| CDS-3UTR CCA 90 bp | TTGGCTCCCTCTGATTTCTGTCTGCAAAGGGGCCGGCAGGTAGGATCTCCTTTCCATAGGGCAGGAAAGTaGTGCATGACTGGGCCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: LAPSDFCLQRGRQVGSPFHRAGK*CMTGPH Trigger: GTGGGGCCCAGTCATGCACCACTTTCCTGCCCTATG...GAAAGGAGATCCTACCTGCCGGCCCCTTTGCAGACAGAAATCAGAGGGAGCCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049246.7 |
||
| 3UTR CAA 72 bp | GTTGAATGTGGGAACCTGGCAGGGCTGGGCAACCCCTaGTCTTACAGGGATGAACAAGATGCGGACTATGAG | + |
|
Preference number: 4 (lower is better) Translates to: VECGNLAGLGNP*SYRDEQDADYE Trigger: CTCATAGTCCGCATCTTGTTCATCCCTGTAAGACAAGGGGTTGCCCAGCCCTGCCAGGTTCCCACATTCAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049246.7 ENSMUST00000138140.3 |
||
| CDS-3UTR TCA 90 bp | TGCCAGGGTCGTCCTGGCTTTAGGATGGCTGTTCCAACTCCAGCCATCAGGTCTCAGCTTGGGTACCATTaGGTCAATTCGGACAGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: CQGRPGFRMAVPTPAIRSQLGYH*VNSDRN Trigger: ATTCCTGTCCGAATTGACTCAATGGTACCCAAGCTG...AGACCTGATGGCTGGAGTTGGAACAGCCATCCTAAAGCCAGGACGACCCTGGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049246.7 |
||
| CDS-3UTR CCA 90 bp | AGGGTCGTCCTGGCTTTAGGATGGCTGTTCCAACTCCAGCCATCAGGTCTGACTCGAAAAGTGCCAGCTTaGGTACCATTGAGTCAATTC | + |
|
Preference number: 4 (lower is better) Translates to: RVVLALGWLFQLQPSGLTRKVPA*VPLSQF Trigger: GAATTGACTCAATGGTACCCAAGCTGGCACTTTTCG...AGTCAGACCTGATGGCTGGAGTTGGAACAGCCATCCTAAAGCCAGGACGACCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049246.7 |
||
| CDS-3UTR GCA 90 bp | TTATCACTTAATGCTTGGCTCCCTCTGATTTCTGTCTGCAAAGGGGCCGGCAGGGAAGACAAGAGCAAGTaGCAGGGACACATGGAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: LSLNAWLPLISVCKGAGREDKSK*QGHMEF Trigger: AAACTCCATGTGTCCCTGGCACTTGCTCTTGTCTTC...CCTGCCGGCCCCTTTGCAGACAGAAATCAGAGGGAGCCAAGCATTAAGTGATAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049246.7 |
||
| CDS-3UTR CCA 90 bp | GTCGTCCTGGCTTTAGGATGGCTGTTCCAACTCCAGCCATCAGGTCTGACTTCTGTTTTAAGAAGTAGCTaGAAAGGTTTAGGCCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: VVLALGWLFQLQPSGLTSVLRSS*KGLGLG Trigger: GCCCAGGCCTAAACCTTTCCAGCTACTTCTTAAAAC...AGAAGTCAGACCTGATGGCTGGAGTTGGAACAGCCATCCTAAAGCCAGGACGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138140.3 |
||
| 3UTR CAA 72 bp | CCACACTGGCACAGAACATTGCATTCAAAAACTGGCTaGGCGTACTTTCCTTCGGATCCCACATCCCTAAGG | + |
|
Preference number: 4 (lower is better) Translates to: PHWHRTLHSKTG*AYFPSDPTSLR Trigger: CCTTAGGGATGTGGGATCCGAAGGAAAGTACGCCAAGCCAGTTTTTGAATGCAATGTTCTGTGCCAGTGTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000138140.3 |
||
| CDS-3UTR GCA 90 bp | ACGAACCCAGATGGTATTTTATCACTTAATGCTTGGCTCCCTCTGATTTCTGTCAGGGCAGGAAAGTGGTaGATGACTGGGCCCCACAGT | + |
|
Preference number: 4 (lower is better) Translates to: TNPDGILSLNAWLPLISVRAGKW*MTGPHS Trigger: ACTGTGGGGCCCAGTCATGCACCACTTTCCTGCCCT...GACAGAAATCAGAGGGAGCCAAGCATTAAGTGATAAAATACCATCTGGGTTCGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049246.7 |
||
| CDS-3UTR CCA 90 bp | TGCAGAGGCATCCATCCAGTCAGGACTAGCAGTATTTTTCTCCAGTGCCAGATATCTGTCTGGAACACCTaGAGAAGGAAGTGTAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: CRGIHPVRTSSIFLQCQISVWNT*RRKCRP Trigger: TGGCCTACACTTCCTTCTCCAGGTGTTCCAGACAGA...TATCTGGCACTGGAGAAAAATACTGCTAGTCCTGACTGGATGGATGCCTCTGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049246.7 |
||
| 3UTR CAA 72 bp | AACACCTCCCCAGCATACTCACAGACAAATCTTCCCTaGGGTATAAATTCCAAAGTCCGAAGTCCCCAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: NTSPAYSQTNLP*GINSKVRSPQP Trigger: AGGCTGGGGACTTCGGACTTTGGAATTTATACCCAAGGGAAGATTTGTCTGTGAGTATGCTGGGGAGGTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000138140.3 |
||
| CDS-3UTR TCA 90 bp | GTCGTCCTGGCTTTAGGATGGCTGTTCCAACTCCAGCCATCAGGTCTGACTTCTGTTCACAAGAATGGTTaGGGAATCTCCCAATATTTC | + |
|
Preference number: 4 (lower is better) Translates to: VVLALGWLFQLQPSGLTSVHKNG*GISQYF Trigger: GAAATATTGGGAGATTCCTCAACCATTCTTGTGAAC...AGAAGTCAGACCTGATGGCTGGAGTTGGAACAGCCATCCTAAAGCCAGGACGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049246.7 |
||
| CDS-3UTR TCA 90 bp | TTATCACTTAATGCTTGGCTCCCTCTGATTTCTGTCTGCAAAGGGGCCGGCAGGCGACAAATGTTTCCATaGTCTGTCCACTGTAAATGT | + |
|
Preference number: 4 (lower is better) Translates to: LSLNAWLPLISVCKGAGRRQMFP*SVHCKC Trigger: ACATTTACAGTGGACAGATCATGGAAACATTTGTCG...CCTGCCGGCCCCTTTGCAGACAGAAATCAGAGGGAGCCAAGCATTAAGTGATAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049246.7 |
||
| CDS-3UTR TCA 90 bp | CACTTACCCACACTTAGCTACAAAGACAAGTATTCTGGGAGAGAGTGTATTGATCAGGAAAGTGGTGCATaGCTGGGCCCCACAGTAACA | + |
|
Preference number: 4 (lower is better) Translates to: HLPTLSYKDKYSGRECIDQESGA*LGPTVT Trigger: TGTTACTGTGGGGCCCAGTCATGCACCACTTTCCTG...ATCAATACACTCTCTCCCAGAATACTTGTCTTTGTAGCTAAGTGTGGGTAAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049246.7 |
||
| CDS-3UTR CCA 90 bp | ACTCCAGCCATCAGGTCTGACTTCTGGTTTCCAAGAAGAAATACAAGGACGATGAAGTGTAGGCCATTCTaGACCACCCTATTTCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: TPAIRSDFWFPRRNTRTMKCRPF*TTLFLQ Trigger: CTGCAGAAATAGGGTGGTCCAGAATGGCCTACACTT...CATCGTCCTTGTATTTCTTCTTGGAAACCAGAAGTCAGACCTGATGGCTGGAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049246.7 |
||
| CDS-3UTR CCA 90 bp | GTCGTCCTGGCTTTAGGATGGCTGTTCCAACTCCAGCCATCAGGTCTGACTTCTTTTGGTTCACAAGAATaGTTGAGGAATCTCCCAATA | + |
|
Preference number: 4 (lower is better) Translates to: VVLALGWLFQLQPSGLTSFGSQE*LRNLPI Trigger: TATTGGGAGATTCCTCAACCATTCTTGTGAACCAAA...AGAAGTCAGACCTGATGGCTGGAGTTGGAACAGCCATCCTAAAGCCAGGACGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049246.7 |
||
| 3UTR CAA 72 bp | CCTGGCAAAATATCTTTGGCTGCGAAAAGTGCCAGCTaGGGTACCATTGAGTCAATTCGGACAGGAATCATC | + |
|
Preference number: 4 (lower is better) Translates to: PGKISLAAKSAS*GTIESIRTGII Trigger: GATGATTCCTGTCCGAATTGACTCAATGGTACCCAAGCTGGCACTTTTCGCAGCCAAAGATATTTTGCCAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000138140.3 |
||
| CDS-3UTR GCA 90 bp | GCATCCATCCAGTCAGGACTAGCAGTATTTTTCTCCAGTGCCAGATACCTTGTTTTCCTCCTCAGATGCTaGTATCTCGAGAGAAAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: ASIQSGLAVFFSSARYLVFLLRC*YLERKL Trigger: AAGCTTTCTCTCGAGATAGCAGCATCTGAGGAGGAA...AACAAGGTATCTGGCACTGGAGAAAAATACTGCTAGTCCTGACTGGATGGATGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049246.7 ENSMUST00000138140.3 |
||
| CDS-3UTR GCA 90 bp | GTCGTAAGAGAGTTCTTCTCCTGGCAAAATATCTTTGGCTGCGAAAAGTGCCAGTTCCTCCTCAGATGCTaGTATCTCGAGAGAAAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: VVREFFSWQNIFGCEKCQFLLRC*YLERKL Trigger: AAGCTTTCTCTCGAGATAGCAGCATCTGAGGAGGAA...CTGGCACTTTTCGCAGCCAAAGATATTTTGCCAGGAGAAGAACTCTCTTACGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000138140.3 |
||
| CDS-3UTR CCA 90 bp | ACAAGTATTCTGGGAGAGAGTGTATTGATGGACATTCTATCTGGGCCAAATTGCAGTGCCAGGGACACATaGAGTTTCGATGCAAGCACA | + |
|
Preference number: 4 (lower is better) Translates to: TSILGESVLMDILSGPNCSARDT*SFDAST Trigger: TGTGCTTGCATCGAAACTCCATGTGTCCCTGGCACT...GCAATTTGGCCCAGATAGAATGTCCATCAATACACTCTCTCCCAGAATACTTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049246.7 |
||
| CDS-3UTR CCA 90 bp | ACAAGTGCAGAGGCATCCATCCAGTCAGGACTAGCAGTATTTTTCTCCAGTGCCATTGCATTCAAAAACTaGCTTGGCGTACTTTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: TSAEASIQSGLAVFFSSAIAFKN*LGVLSF Trigger: GAAGGAAAGTACGCCAAGCCAGTTTTTGAATGCAAT...GGCACTGGAGAAAAATACTGCTAGTCCTGACTGGATGGATGCCTCTGCACTTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000049246.7 |
||
| CDS-3UTR CCA 90 bp | GGATTCATCCTGTTTGCTTGTATCCTGTTAGTTACAACATACCCACTTACCCACGGAAGGTTATTTGTGTaGGGTCAATGTCTGCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: GFILFACILLVTTYPLTHGRLFV*GQCLLQ Trigger: CTGGAGCAGACATTGACCCCACACAAATAACCTTCC...GTGGGTAAGTGGGTATGTTGTAACTAACAGGATACAAGCAAACAGGATGAATCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049246.7 |
||
| 3UTR CAA 72 bp | TATCTTTGGCTGCGAAAAGTGCCAGCTTGGGTACCATaGAGTCAATTCGGACAGGAATCATCAACAGATTTG | + |
|
Preference number: 4 (lower is better) Translates to: YLWLRKVPAWVP*SQFGQESSTDL Trigger: CAAATCTGTTGATGATTCCTGTCCGAATTGACTCAATGGTACCCAAGCTGGCACTTTTCGCAGCCAAAGATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138140.3 |
||
| 3UTR CAA 72 bp | ATACAAGGACGATGCCCAAGGATTCATCCTGTTTGCTaGTATCCTGTTAGTTACAACATACCCACTTACCCA | + |
|
Preference number: 4 (lower is better) Translates to: IQGRCPRIHPVC*YPVSYNIPTYP Trigger: TGGGTAAGTGGGTATGTTGTAACTAACAGGATACAAGCAAACAGGATGAATCCTTGGGCATCGTCCTTGTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049246.7 ENSMUST00000138140.3 |
||
| CDS-3UTR GCA 90 bp | ACGAACCCAGATGGTATTTTATCACTTAATGCTTGGCTCCCTCTGATTTCTGTCACTGGCACAGAACATTaGATTCAAAAACTGGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: TNPDGILSLNAWLPLISVTGTEH*IQKLAW Trigger: CCAAGCCAGTTTTTGAATGCAATGTTCTGTGCCAGT...GACAGAAATCAGAGGGAGCCAAGCATTAAGTGATAAAATACCATCTGGGTTCGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049246.7 |
||
| CDS-3UTR TCA 90 bp | AAGTATTCTGGGAGAGAGTGTATTGATGGACATTCTATCTGGGCCAAATTGCTGGTTAAGGAATCTTCCTaGATAGTCGTAAGAGAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: KYSGRECIDGHSIWAKLLVKESS*IVVREF Trigger: GAACTCTCTTACGACTATTCAGGAAGATTCCTTAAC...CAGCAATTTGGCCCAGATAGAATGTCCATCAATACACTCTCTCCCAGAATACTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049246.7 |
||
| CDS-3UTR CCA 90 bp | ACGAACCCAGATGGTATTTTATCACTTAATGCTTGGCTCCCTCTGATTTCTGTCAATCATCAACAGATTTaGTTCACAAGAATGGTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: TNPDGILSLNAWLPLISVNHQQI*FTRMVE Trigger: CTCAACCATTCTTGTGAACCAAATCTGTTGATGATT...GACAGAAATCAGAGGGAGCCAAGCATTAAGTGATAAAATACCATCTGGGTTCGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049246.7 |
||
| CDS TCA 90 bp | AAGGTTATTTGTGTGGGGTCAATGTCTGCTCCAGGTCCAGCAACATaGTCAGGAGTATACTGGAAAGGTTTAGGCCTGGGCTCCGCCCCC | + |
|
Preference number: 5 (lower is better) Translates to: KVICVGSMSAPGPAT*SGVYWKGLGLGSAP Trigger: GGGGGCGGAGCCCAGGCCTAAACCTTTCCAGTATACTCCTGATCATGTTGCTGGACCTGGAGCAGACATTGACCCCACACAAATAACCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049246.7 |
||
| CDS-3UTR CAA 90 bp | TGCAGAGGCATCCATCCAGTCAGGACTAGCAGTATTTTTCTCCAGTGCCAGATATCCAGGGAAGGTTATTaGTGTGGGGTCAATGTCTGC | + |
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Preference number: 5 (lower is better) Translates to: CRGIHPVRTSSIFLQCQISREGY*CGVNVC Trigger: GCAGACATTGACCCCACACAAATAACCTTCCCTGGA...TATCTGGCACTGGAGAAAAATACTGCTAGTCCTGACTGGATGGATGCCTCTGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049246.7 |
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| CDS GCA 90 bp | GATGCAAGCACATCCAGGGAAGGTTATTTGTGTGGGGTCAATGTCTaGTCCAGGTCCAGCAACATGATCAGGAGTATACTGGAAAGGTTT | + |
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Preference number: 5 (lower is better) Translates to: DASTSREGYLCGVNV*SRSSNMIRSILERF Trigger: AAACCTTTCCAGTATACTCCTGATCATGTTGCTGGACCTGGAGCAGACATTGACCCCACACAAATAACCTTCCCTGGATGTGCTTGCATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049246.7 |
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| CDS-3UTR CAA 90 bp | CAGCCATCAGGTCTGACTTCTGGTTTCCAAGAAGAAATACAAGGACGATGCCCACATTCAAAAACTGGCTaGGCGTACTTTCCTTCGGAT | + |
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Preference number: 5 (lower is better) Translates to: QPSGLTSGFQEEIQGRCPHSKTG*AYFPSD Trigger: ATCCGAAGGAAAGTACGCCAAGCCAGTTTTTGAATG...TGGGCATCGTCCTTGTATTTCTTCTTGGAAACCAGAAGTCAGACCTGATGGCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049246.7 |
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| CDS-3UTR CAA 90 bp | CAGCCATCAGGTCTGACTTCTGGTTTCCAAGAAGAAATACAAGGACGATGCCCACACTGGCACAGAACATaGCATTCAAAAACTGGCTTG | + |
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Preference number: 5 (lower is better) Translates to: QPSGLTSGFQEEIQGRCPHWHRT*HSKTGL Trigger: CAAGCCAGTTTTTGAATGCAATGTTCTGTGCCAGTG...TGGGCATCGTCCTTGTATTTCTTCTTGGAAACCAGAAGTCAGACCTGATGGCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049246.7 |
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| CDS-3UTR CAA 90 bp | TGCAGAGGCATCCATCCAGTCAGGACTAGCAGTATTTTTCTCCAGTGCCAGATACAGACAAATCTTCCCTaGGGTATAAATTCCAAAGTC | + |
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Preference number: 5 (lower is better) Translates to: CRGIHPVRTSSIFLQCQIQTNLP*GINSKV Trigger: GACTTTGGAATTTATACCCAAGGGAAGATTTGTCTG...TATCTGGCACTGGAGAAAAATACTGCTAGTCCTGACTGGATGGATGCCTCTGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049246.7 |
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| CDS-3UTR CAA 90 bp | CCTACAAGTGCAGAGGCATCCATCCAGTCAGGACTAGCAGTATTTTTCTCCAGTGGTTCACAAGAATGGTaGAGGAATCTCCCAATATTT | + |
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Preference number: 5 (lower is better) Translates to: PTSAEASIQSGLAVFFSSGSQEW*RNLPIF Trigger: AAATATTGGGAGATTCCTCAACCATTCTTGTGAACC...ACTGGAGAAAAATACTGCTAGTCCTGACTGGATGGATGCCTCTGCACTTGTAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049246.7 |
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| CDS-3UTR CAA 90 bp | GGATTCATCCTGTTTGCTTGTATCCTGTTAGTTACAACATACCCACTTACCCACGCGAAAAGTGCCAGCTaGGGTACCATTGAGTCAATT | + |
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Preference number: 5 (lower is better) Translates to: GFILFACILLVTTYPLTHAKSAS*GTIESI Trigger: AATTGACTCAATGGTACCCAAGCTGGCACTTTTCGC...GTGGGTAAGTGGGTATGTTGTAACTAACAGGATACAAGCAAACAGGATGAATCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049246.7 |
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| CDS CAA 90 bp | CCACAAGCTCACAGGCAAGTTCTCCAGGCCGCACGCTACATCTTGTaGTTCTGTCGGGGCTACAGATTCCTCCTCAGATGCTGCTATCTC | + |
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Preference number: 6 (lower is better) Translates to: PQAHRQVLQAARYIL*FCRGYRFLLRCCYL Trigger: GAGATAGCAGCATCTGAGGAGGAATCTGTAGCCCCGACAGAACAACAAGATGTAGCGTGCGGCCTGGAGAACTTGCCTGTGAGCTTGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049246.7 ENSMUST00000138140.3 |
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| CDS CAA 90 bp | AGGCCACAAGCTCACAGGCAAGTTCTCCAGGCCGCACGCTACATCTaGTTGTTCTGTCGGGGCTACAGATTCCTCCTCAGATGCTGCTAT | + |
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Preference number: 6 (lower is better) Translates to: RPQAHRQVLQAARYI*LFCRGYRFLLRCCY Trigger: ATAGCAGCATCTGAGGAGGAATCTGTAGCCCCGACAGAACAACAAGATGTAGCGTGCGGCCTGGAGAACTTGCCTGTGAGCTTGTGGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049246.7 ENSMUST00000138140.3 |
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| CDS TCA 72 bp | TGTGTGGGGTCAATGTCTGCTCCAGGTCCAGCAACATaGTCAGGAGTATACTGGAAAGGTTTAGGCCTGGGC | + |
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Preference number: 6 (lower is better) Translates to: CVGSMSAPGPAT*SGVYWKGLGLG Trigger: GCCCAGGCCTAAACCTTTCCAGTATACTCCTGATCATGTTGCTGGACCTGGAGCAGACATTGACCCCACACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049246.7 |
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| CDS GCA 72 bp | TTGTTCTGTCGGGGCTACAGATTCCTCCTCAGATGCTaGTATCTCGAGAGAAAGCTTCTCCACACCTTCCGC | + |
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Preference number: 6 (lower is better) Translates to: LFCRGYRFLLRC*YLERKLLHTFR Trigger: GCGGAAGGTGTGGAGAAGCTTTCTCTCGAGATAGCAGCATCTGAGGAGGAATCTGTAGCCCCGACAGAACAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049246.7 ENSMUST00000138140.3 |
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| CDS GCA 72 bp | ACATCCAGGGAAGGTTATTTGTGTGGGGTCAATGTCTaGTCCAGGTCCAGCAACATGATCAGGAGTATACTG | + |
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Preference number: 6 (lower is better) Translates to: TSREGYLCGVNV*SRSSNMIRSIL Trigger: CAGTATACTCCTGATCATGTTGCTGGACCTGGAGCAGACATTGACCCCACACAAATAACCTTCCCTGGATGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049246.7 |
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