Pregenerated sensors for SETDB2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000071350Ensembl transcript IDs: ENSMUST00000095775.10, ENSMUST00000111253.3, ENSMUST00000161459.8
Found 107 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTGAACAAAGGAAACAGAAGTATTAACCATAATCTCTTTGACAACTaGTATTGTTATACATTGAGCAGCTCAGTTCACGGATGGATATCA | + |
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Preference number: 1 (lower is better) Translates to: LNKGNRSINHNLFDN*YCYTLSSSVHGWIS Trigger: TGATATCCATCCGTGAACTGAGCTGCTCAATGTATAACAATATCAGTTGTCAAAGAGATTATGGTTAATACTTCTGTTTCCTTTGTTCAG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095775.10 ENSMUST00000161459.8 |
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| 3UTR CAA 90 bp | GAATTTGACCAGCGTTTGAAGGTTCGGCGGGTATCAGATTTACTCTaGTGTAAGTCTCTTGAAAGCTCAGGAAAGCTCACTGAACTCGGT | + |
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Preference number: 2 (lower is better) Translates to: EFDQRLKVRRVSDLL*CKSLESSGKLTELG Trigger: ACCGAGTTCAGTGAGCTTTCCTGAGCTTTCAAGAGACTTACACAAGAGTAAATCTGATACCCGCCGAACCTTCAAACGCTGGTCAAATTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111253.3 |
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| 3UTR-3UTR CAA 90 bp | CACAGTCAGGGGACTTATAAAAGCATGGGCTTAGGTTTCTGTATGAGCACATTAGAATTTGACCAGCGTTaGAAGGTTCGGCGGGTATCA | + |
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Preference number: 3 (lower is better) Translates to: HSQGTYKSMGLGFCMSTLEFDQR*KVRRVS Trigger: TGATACCCGCCGAACCTTCAAACGCTGGTCAAATTC...TAATGTGCTCATACAGAAACCTAAGCCCATGCTTTTATAAGTCCCCTGACTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111253.3 |
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| 3UTR-3UTR CAA 90 bp | GTGAGACACAGTCAGGGGACTTATAAAAGCATGGGCTTAGGTTTCTGTATGAGCGTATCAGATTTACTCTaGTGTAAGTCTCTTGAAAGC | + |
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Preference number: 3 (lower is better) Translates to: VRHSQGTYKSMGLGFCMSVSDLL*CKSLES Trigger: GCTTTCAAGAGACTTACACAAGAGTAAATCTGATAC...GCTCATACAGAAACCTAAGCCCATGCTTTTATAAGTCCCCTGACTGTGTCTCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111253.3 |
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| 3UTR TCA 72 bp | GGGCTTAGGTTTCTGTATGAGCACATTAAATTGTTTTaGTACTCAAGCTTCACTGACATCTCAACTGGGAGG | + |
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Preference number: 3 (lower is better) Translates to: GLRFLYEHIKLF*YSSFTDISTGR Trigger: CCTCCCAGTTGAGATGTCAGTGAAGCTTGAGTATCAAAACAATTTAATGTGCTCATACAGAAACCTAAGCCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111253.3 |
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| CDS-3UTR CCA 90 bp | ACTGACATCTCAACTGGGAGGCTGGGGTCACAGGTCACAGCCAGTCTCAGCTACCATAGTCTCCATTTGTaGCAGACCCATCCTTTATCT | + |
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Preference number: 4 (lower is better) Translates to: TDISTGRLGSQVTASLSYHSLHL*QTHPLS Trigger: AGATAAAGGATGGGTCTGCCACAAATGGAGACTATG...GTAGCTGAGACTGGCTGTGACCTGTGACCCCAGCCTCCCAGTTGAGATGTCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111253.3 |
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| CDS-3UTR CCA 90 bp | TTGAAAGCTCAGGAAAGCTCACTGAACTCGGTGGCAGAGGAGAAGGGGTCAGACGCGTGTTACTCAGAGTaGCTTCATTTACTAGATTCA | + |
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Preference number: 4 (lower is better) Translates to: LKAQESSLNSVAEEKGSDACYSE*LHLLDS Trigger: TGAATCTAGTAAATGAAGCCACTCTGAGTAACACGC...GTCTGACCCCTTCTCCTCTGCCACCGAGTTCAGTGAGCTTTCCTGAGCTTTCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111253.3 |
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| CDS-3UTR GCA 90 bp | TCTTGTGTAAGTCTCTTGAAAGCTCAGGAAAGCTCACTGAACTCGGTGGCAGAGTCCTTTTCCAGTGTTTaGGTGTTACTCAGAGTGGCT | + |
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Preference number: 4 (lower is better) Translates to: SCVSLLKAQESSLNSVAESFSSV*VLLRVA Trigger: AGCCACTCTGAGTAACACGCAAACACTGGAAAAGGA...CTCTGCCACCGAGTTCAGTGAGCTTTCCTGAGCTTTCAAGAGACTTACACAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111253.3 |
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| CDS-3UTR TCA 90 bp | TGTAATAACACTGTGATACTTGATGAGTGCCCTTATTTTGCTTCTAACCTAAGAAAGGCCTGCTGGCTTTaGGAGGCTGCAGGCTCTTCC | + |
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Preference number: 4 (lower is better) Translates to: CNNTVILDECPYFASNLRKACWL*EAAGSS Trigger: GGAAGAGCCTGCAGCCTCTCAAAGCCAGCAGGCCTT...TCTTAGGTTAGAAGCAAAATAAGGGCACTCATCAAGTATCACAGTGTTATTACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095775.10 ENSMUST00000161459.8 |
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| 3UTR CAA 72 bp | CAGCGTTTGAAGGTTCGGCGGGTATCAGATTTACTCTaGTGTAAGTCTCTTGAAAGCTCAGGAAAGCTCACT | + |
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Preference number: 4 (lower is better) Translates to: QRLKVRRVSDLL*CKSLESSGKLT Trigger: AGTGAGCTTTCCTGAGCTTTCAAGAGACTTACACAAGAGTAAATCTGATACCCGCCGAACCTTCAAACGCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111253.3 |
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| CDS-3UTR GCA 90 bp | TGTAATAACACTGTGATACTTGATGAGTGCCCTTATTTTGCTTCTAACCTAAGAGCAGAGGATTTCCTTTaGAGGCGTGGCCCCAGCTTC | + |
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Preference number: 4 (lower is better) Translates to: CNNTVILDECPYFASNLRAEDFL*RRGPSF Trigger: GAAGCTGGGGCCACGCCTGCAAAGGAAATCCTCTGC...TCTTAGGTTAGAAGCAAAATAAGGGCACTCATCAAGTATCACAGTGTTATTACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095775.10 ENSMUST00000161459.8 |
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| CDS-3UTR TCA 90 bp | TGTAATAACACTGTGATACTTGATGAGTGCCCTTATTTTGCTTCTAACCTAAGAACAGACTCTCCTTACTaGGCTGCATCAGGGAAGCAG | + |
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Preference number: 4 (lower is better) Translates to: CNNTVILDECPYFASNLRTDSPY*AASGKQ Trigger: CTGCTTCCCTGATGCAGCTCAGTAAGGAGAGTCTGT...TCTTAGGTTAGAAGCAAAATAAGGGCACTCATCAAGTATCACAGTGTTATTACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095775.10 ENSMUST00000161459.8 |
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| CDS-3UTR TCA 90 bp | TGTAATAACACTGTGATACTTGATGAGTGCCCTTATTTTGCTTCTAACCTAAGATTTGGAAGTGACATCTaGTTGGTAGCTGCAGGGGGT | + |
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Preference number: 4 (lower is better) Translates to: CNNTVILDECPYFASNLRFGSDI*LVAAGG Trigger: ACCCCCTGCAGCTACCAATCAGATGTCACTTCCAAA...TCTTAGGTTAGAAGCAAAATAAGGGCACTCATCAAGTATCACAGTGTTATTACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000095775.10 ENSMUST00000161459.8 |
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| CDS-3UTR TCA 90 bp | TGTAATAACACTGTGATACTTGATGAGTGCCCTTATTTTGCTTCTAACCTAAGATGGGGCGGCAGAATCTaGGCAAACAAATCCCATGTT | + |
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Preference number: 4 (lower is better) Translates to: CNNTVILDECPYFASNLRWGGRI*ANKSHV Trigger: AACATGGGATTTGTTTGCTCAGATTCTGCCGCCCCA...TCTTAGGTTAGAAGCAAAATAAGGGCACTCATCAAGTATCACAGTGTTATTACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095775.10 ENSMUST00000161459.8 |
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| CDS-3UTR TCA 90 bp | TGTAATAACACTGTGATACTTGATGAGTGCCCTTATTTTGCTTCTAACCTAAGATCACATACCTGTTGGTaGAGAAGGCCACCAATGGGA | + |
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Preference number: 4 (lower is better) Translates to: CNNTVILDECPYFASNLRSHTCW*RRPPMG Trigger: TCCCATTGGTGGCCTTCTTCACCAACAGGTATGTGA...TCTTAGGTTAGAAGCAAAATAAGGGCACTCATCAAGTATCACAGTGTTATTACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095775.10 ENSMUST00000161459.8 |
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| CDS-3UTR GCA 90 bp | TGTAATAACACTGTGATACTTGATGAGTGCCCTTATTTTGCTTCTAACCTAAGACATCTGATTGGTAGCTaGAGGGGGTTTTCTCCCTTC | + |
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Preference number: 4 (lower is better) Translates to: CNNTVILDECPYFASNLRHLIGS*RGFSPF Trigger: GAAGGGAGAAAACCCCCTGCAGCTACCAATCAGATG...TCTTAGGTTAGAAGCAAAATAAGGGCACTCATCAAGTATCACAGTGTTATTACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000095775.10 ENSMUST00000161459.8 |
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| CDS-3UTR GCA 90 bp | TGTAATAACACTGTGATACTTGATGAGTGCCCTTATTTTGCTTCTAACCTAAGATCTCAGGAGTGGCTCTaGGCAGTAACCTTCCTGAAT | + |
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Preference number: 4 (lower is better) Translates to: CNNTVILDECPYFASNLRSQEWL*AVTFLN Trigger: ATTCAGGAAGGTTACTGCGCAGAGCCACTCCTGAGA...TCTTAGGTTAGAAGCAAAATAAGGGCACTCATCAAGTATCACAGTGTTATTACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095775.10 ENSMUST00000161459.8 |
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| CDS-3UTR GCA 90 bp | TGTAATAACACTGTGATACTTGATGAGTGCCCTTATTTTGCTTCTAACCTAAGATCCACTATGGTTGCGTaGTTACACCTGTATGCTGGG | + |
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Preference number: 4 (lower is better) Translates to: CNNTVILDECPYFASNLRSTMVA*LHLYAG Trigger: CCCAGCATACAGGTGTAAGCACGCAACCATAGTGGA...TCTTAGGTTAGAAGCAAAATAAGGGCACTCATCAAGTATCACAGTGTTATTACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095775.10 ENSMUST00000161459.8 |
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| CDS-3UTR GCA 90 bp | TGTAATAACACTGTGATACTTGATGAGTGCCCTTATTTTGCTTCTAACCTAAGACTCTCCTTACTGAGCTaGATCAGGGAAGCAGATGGA | + |
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Preference number: 4 (lower is better) Translates to: CNNTVILDECPYFASNLRLSLLS*IREADG Trigger: TCCATCTGCTTCCCTGATGCAGCTCAGTAAGGAGAG...TCTTAGGTTAGAAGCAAAATAAGGGCACTCATCAAGTATCACAGTGTTATTACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095775.10 ENSMUST00000161459.8 |
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| CDS-3UTR CCA 90 bp | TGTAATAACACTGTGATACTTGATGAGTGCCCTTATTTTGCTTCTAACCTAAGATTTCCTTTGCAGGCGTaGCCCCAGCTTCATAACCAT | + |
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Preference number: 4 (lower is better) Translates to: CNNTVILDECPYFASNLRFPLQA*PQLHNH Trigger: ATGGTTATGAAGCTGGGGCCACGCCTGCAAAGGAAA...TCTTAGGTTAGAAGCAAAATAAGGGCACTCATCAAGTATCACAGTGTTATTACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095775.10 ENSMUST00000161459.8 |
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| CDS-3UTR TCA 90 bp | TGTAATAACACTGTGATACTTGATGAGTGCCCTTATTTTGCTTCTAACCTAAGATGTCGTCTTTGGAAGTaGCATCTGATTGGTAGCTGC | + |
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Preference number: 4 (lower is better) Translates to: CNNTVILDECPYFASNLRCRLWK*HLIGSC Trigger: GCAGCTACCAATCAGATGTCACTTCCAAAGACGACA...TCTTAGGTTAGAAGCAAAATAAGGGCACTCATCAAGTATCACAGTGTTATTACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095775.10 ENSMUST00000161459.8 |
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| CDS-3UTR TCA 90 bp | TGTAATAACACTGTGATACTTGATGAGTGCCCTTATTTTGCTTCTAACCTAAGATTTGGACAGCAACTATaGTTGAGGAAACGGCCCACA | + |
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Preference number: 4 (lower is better) Translates to: CNNTVILDECPYFASNLRFGQQL*LRKRPT Trigger: TGTGGGCCGTTTCCTCAATCATAGTTGCTGTCCAAA...TCTTAGGTTAGAAGCAAAATAAGGGCACTCATCAAGTATCACAGTGTTATTACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095775.10 ENSMUST00000161459.8 |
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| CDS-3UTR GCA 90 bp | TGTAATAACACTGTGATACTTGATGAGTGCCCTTATTTTGCTTCTAACCTAAGACCCTTTTCCAGTGTTTaGGTGTTACTCAGAGTGGCT | + |
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Preference number: 4 (lower is better) Translates to: CNNTVILDECPYFASNLRPFSSV*VLLRVA Trigger: AGCCACTCTGAGTAACACGCAAACACTGGAAAAGGG...TCTTAGGTTAGAAGCAAAATAAGGGCACTCATCAAGTATCACAGTGTTATTACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095775.10 |
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| CDS-3UTR CCA 90 bp | TGTAATAACACTGTGATACTTGATGAGTGCCCTTATTTTGCTTCTAACCTAAGACTTACACCTGTATGCTaGGGCAGAGTCTTCTCTACT | + |
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Preference number: 4 (lower is better) Translates to: CNNTVILDECPYFASNLRLTPVC*GRVFST Trigger: AGTAGAGAAGACTCTGCCCCAGCATACAGGTGTAAG...TCTTAGGTTAGAAGCAAAATAAGGGCACTCATCAAGTATCACAGTGTTATTACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095775.10 ENSMUST00000161459.8 |
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| CDS-3UTR CCA 90 bp | TGTAATAACACTGTGATACTTGATGAGTGCCCTTATTTTGCTTCTAACCTAAGACTTTGTCCTCTCACTTaGCAGCTCCTCATCACACAA | + |
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Preference number: 4 (lower is better) Translates to: CNNTVILDECPYFASNLRLCPLT*QLLITQ Trigger: TTGTGTGATGAGGAGCTGCCAAGTGAGAGGACAAAG...TCTTAGGTTAGAAGCAAAATAAGGGCACTCATCAAGTATCACAGTGTTATTACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095775.10 ENSMUST00000161459.8 |
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| CDS-3UTR TCA 90 bp | TGTAATAACACTGTGATACTTGATGAGTGCCCTTATTTTGCTTCTAACCTAAGATCATTTTGCTTTGGGTaGTTCCGAGTCAACTGGACA | + |
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Preference number: 4 (lower is better) Translates to: CNNTVILDECPYFASNLRSFCFG*FRVNWT Trigger: TGTCCAGTTGACTCGGAATCACCCAAAGCAAAATGA...TCTTAGGTTAGAAGCAAAATAAGGGCACTCATCAAGTATCACAGTGTTATTACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095775.10 ENSMUST00000161459.8 |
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| CDS-3UTR GCA 90 bp | TGTAATAACACTGTGATACTTGATGAGTGCCCTTATTTTGCTTCTAACCTAAGATGCCTTGGCATTCTTTaGTGTCAACTGAAGACATGC | + |
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Preference number: 4 (lower is better) Translates to: CNNTVILDECPYFASNLRCLGIL*CQLKTC Trigger: GCATGTCTTCAGTTGACAGCAAAGAATGCCAAGGCA...TCTTAGGTTAGAAGCAAAATAAGGGCACTCATCAAGTATCACAGTGTTATTACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095775.10 ENSMUST00000161459.8 |
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| CDS-3UTR GCA 90 bp | TGTAATAACACTGTGATACTTGATGAGTGCCCTTATTTTGCTTCTAACCTAAGATCCTTTTCCAGTGTTTaGGTGTTACTCAGAGTGGCT | + |
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Preference number: 4 (lower is better) Translates to: CNNTVILDECPYFASNLRSFSSV*VLLRVA Trigger: AGCCACTCTGAGTAACACGCAAACACTGGAAAAGGA...TCTTAGGTTAGAAGCAAAATAAGGGCACTCATCAAGTATCACAGTGTTATTACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161459.8 |
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| CDS-3UTR CCA 90 bp | TGTAATAACACTGTGATACTTGATGAGTGCCCTTATTTTGCTTCTAACCTAAGAGTCCTGGAGCAGATATaGCGATGGAAAGATATATGC | + |
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Preference number: 4 (lower is better) Translates to: CNNTVILDECPYFASNLRVLEQI*RWKDIC Trigger: GCATATATCTTTCCATCGCCATATCTGCTCCAGGAC...TCTTAGGTTAGAAGCAAAATAAGGGCACTCATCAAGTATCACAGTGTTATTACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095775.10 ENSMUST00000161459.8 |
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| CDS-3UTR CCA 90 bp | TGTAATAACACTGTGATACTTGATGAGTGCCCTTATTTTGCTTCTAACCTAAGAACAAGGGACATGCCTTaGCATTCTTTGCTGTCAACT | + |
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Preference number: 4 (lower is better) Translates to: CNNTVILDECPYFASNLRTRDMP*HSLLST Trigger: AGTTGACAGCAAAGAATGCCAAGGCATGTCCCTTGT...TCTTAGGTTAGAAGCAAAATAAGGGCACTCATCAAGTATCACAGTGTTATTACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095775.10 ENSMUST00000161459.8 |
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| CDS-3UTR CCA 90 bp | TGTAATAACACTGTGATACTTGATGAGTGCCCTTATTTTGCTTCTAACCTAAGATTGGGACTTCTTTCCTaGGACTTCAAGCACCTGTTT | + |
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Preference number: 4 (lower is better) Translates to: CNNTVILDECPYFASNLRLGLLS*DFKHLF Trigger: AAACAGGTGCTTGAAGTCCCAGGAAAGAAGTCCCAA...TCTTAGGTTAGAAGCAAAATAAGGGCACTCATCAAGTATCACAGTGTTATTACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095775.10 ENSMUST00000161459.8 |
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| CDS-3UTR CCA 90 bp | TGTAATAACACTGTGATACTTGATGAGTGCCCTTATTTTGCTTCTAACCTAAGACATCAGGGAAGCAGATaGAATCTTTGTCCTCTCACT | + |
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Preference number: 4 (lower is better) Translates to: CNNTVILDECPYFASNLRHQGSR*NLCPLT Trigger: AGTGAGAGGACAAAGATTCCATCTGCTTCCCTGATG...TCTTAGGTTAGAAGCAAAATAAGGGCACTCATCAAGTATCACAGTGTTATTACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095775.10 ENSMUST00000161459.8 |
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| CDS-3UTR CCA 90 bp | TGTAATAACACTGTGATACTTGATGAGTGCCCTTATTTTGCTTCTAACCTAAGACTGCACCCAGAGATTTaGACAGCAACTATGATTGAG | + |
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Preference number: 4 (lower is better) Translates to: CNNTVILDECPYFASNLRLHPEI*TATMIE Trigger: CTCAATCATAGTTGCTGTCCAAATCTCTGGGTGCAG...TCTTAGGTTAGAAGCAAAATAAGGGCACTCATCAAGTATCACAGTGTTATTACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095775.10 ENSMUST00000161459.8 |
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| CDS-3UTR TCA 90 bp | TGTAATAACACTGTGATACTTGATGAGTGCCCTTATTTTGCTTCTAACCTAAGAGAGTTCACGTGTTCTTaGGCTGGTTTAAATCCATTC | + |
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Preference number: 4 (lower is better) Translates to: CNNTVILDECPYFASNLREFTCS*AGLNPF Trigger: GAATGGATTTAAACCAGCTCAAGAACACGTGAACTC...TCTTAGGTTAGAAGCAAAATAAGGGCACTCATCAAGTATCACAGTGTTATTACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095775.10 ENSMUST00000161459.8 |
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| CDS-3UTR GCA 90 bp | TGTAATAACACTGTGATACTTGATGAGTGCCCTTATTTTGCTTCTAACCTAAGACGATGGAAAGATATATaGAGTGGGGCTTCCTTTTTC | + |
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Preference number: 4 (lower is better) Translates to: CNNTVILDECPYFASNLRRWKDI*SGASFF Trigger: GAAAAAGGAAGCCCCACTGCATATATCTTTCCATCG...TCTTAGGTTAGAAGCAAAATAAGGGCACTCATCAAGTATCACAGTGTTATTACA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000095775.10 ENSMUST00000161459.8 |
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| CDS-3UTR CCA 90 bp | TGTAATAACACTGTGATACTTGATGAGTGCCCTTATTTTGCTTCTAACCTAAGACATAGTCTCCATTTGTaGCAGACCCATCCTTTATCT | + |
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Preference number: 4 (lower is better) Translates to: CNNTVILDECPYFASNLRHSLHL*QTHPLS Trigger: AGATAAAGGATGGGTCTGCCACAAATGGAGACTATG...TCTTAGGTTAGAAGCAAAATAAGGGCACTCATCAAGTATCACAGTGTTATTACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095775.10 ENSMUST00000161459.8 |
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| CDS-3UTR TCA 90 bp | TGTAATAACACTGTGATACTTGATGAGTGCCCTTATTTTGCTTCTAACCTAAGAGAAAGGAATCGACACTaGTTCCACTCCATTACTAAT | + |
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Preference number: 4 (lower is better) Translates to: CNNTVILDECPYFASNLRERNRH*FHSITN Trigger: ATTAGTAATGGAGTGGAATCAGTGTCGATTCCTTTC...TCTTAGGTTAGAAGCAAAATAAGGGCACTCATCAAGTATCACAGTGTTATTACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095775.10 ENSMUST00000161459.8 |
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| CDS-3UTR TCA 90 bp | TGTAATAACACTGTGATACTTGATGAGTGCCCTTATTTTGCTTCTAACCTAAGACTCAGAACAGTCACATaGATCAGAAAACATGTTGGA | + |
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Preference number: 4 (lower is better) Translates to: CNNTVILDECPYFASNLRLRTVT*IRKHVG Trigger: TCCAACATGTTTTCTGATTCATGTGACTGTTCTGAG...TCTTAGGTTAGAAGCAAAATAAGGGCACTCATCAAGTATCACAGTGTTATTACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095775.10 ENSMUST00000161459.8 |
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| CDS-3UTR GCA 90 bp | TGTAATAACACTGTGATACTTGATGAGTGCCCTTATTTTGCTTCTAACCTAAGATCTGTTTGTTACACTTaGAGAGCAGGTTGCATTCAT | + |
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Preference number: 4 (lower is better) Translates to: CNNTVILDECPYFASNLRSVCYT*RAGCIH Trigger: ATGAATGCAACCTGCTCTGCAAGTGTAACAAACAGA...TCTTAGGTTAGAAGCAAAATAAGGGCACTCATCAAGTATCACAGTGTTATTACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095775.10 ENSMUST00000161459.8 |
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| CDS-3UTR GCA 90 bp | TGTAATAACACTGTGATACTTGATGAGTGCCCTTATTTTGCTTCTAACCTAAGATCTACAAAAACATTCTaGACCCAGAGATTTGGACAG | + |
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Preference number: 4 (lower is better) Translates to: CNNTVILDECPYFASNLRSTKTF*TQRFGQ Trigger: CTGTCCAAATCTCTGGGTGCAGAATGTTTTTGTAGA...TCTTAGGTTAGAAGCAAAATAAGGGCACTCATCAAGTATCACAGTGTTATTACA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000095775.10 ENSMUST00000161459.8 |
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| CDS-3UTR CCA 90 bp | TGTAATAACACTGTGATACTTGATGAGTGCCCTTATTTTGCTTCTAACCTAAGAGCGTGTTACTCAGAGTaGCTTCATTTACTAGATTCA | + |
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Preference number: 4 (lower is better) Translates to: CNNTVILDECPYFASNLRACYSE*LHLLDS Trigger: TGAATCTAGTAAATGAAGCCACTCTGAGTAACACGC...TCTTAGGTTAGAAGCAAAATAAGGGCACTCATCAAGTATCACAGTGTTATTACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095775.10 ENSMUST00000161459.8 |
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| CDS-3UTR CCA 90 bp | TGTAATAACACTGTGATACTTGATGAGTGCCCTTATTTTGCTTCTAACCTAAGAAACTTCATTTTGCTTTaGGTGATTCCGAGTCAACTG | + |
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Preference number: 4 (lower is better) Translates to: CNNTVILDECPYFASNLRNFILL*VIPSQL Trigger: CAGTTGACTCGGAATCACCCAAAGCAAAATGAAGTT...TCTTAGGTTAGAAGCAAAATAAGGGCACTCATCAAGTATCACAGTGTTATTACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095775.10 ENSMUST00000161459.8 |
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| CDS-3UTR GCA 90 bp | TGTAATAACACTGTGATACTTGATGAGTGCCCTTATTTTGCTTCTAACCTAAGAAGAGTCTTCTCTACTTaGAGTTATATCTATCACGTC | + |
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Preference number: 4 (lower is better) Translates to: CNNTVILDECPYFASNLRRVFST*SYIYHV Trigger: GACGTGATAGATATAACTGCAAGTAGAGAAGACTCT...TCTTAGGTTAGAAGCAAAATAAGGGCACTCATCAAGTATCACAGTGTTATTACA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095775.10 ENSMUST00000161459.8 |
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| CDS-3UTR CCA 90 bp | TGTAATAACACTGTGATACTTGATGAGTGCCCTTATTTTGCTTCTAACCTAAGACACGTGTTCTTGAGCTaGTTTAAATCCATTCTTATC | + |
|
Preference number: 4 (lower is better) Translates to: CNNTVILDECPYFASNLRHVFLS*FKSILI Trigger: GATAAGAATGGATTTAAACCAGCTCAAGAACACGTG...TCTTAGGTTAGAAGCAAAATAAGGGCACTCATCAAGTATCACAGTGTTATTACA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095775.10 ENSMUST00000161459.8 |
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| CDS-3UTR CCA 90 bp | TGTAATAACACTGTGATACTTGATGAGTGCCCTTATTTTGCTTCTAACCTAAGATTATTAAACCCACATTaGCAGAGGATTTCCTTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: CNNTVILDECPYFASNLRLLNPH*QRISFA Trigger: TGCAAAGGAAATCCTCTGCCAATGTGGGTTTAATAA...TCTTAGGTTAGAAGCAAAATAAGGGCACTCATCAAGTATCACAGTGTTATTACA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095775.10 ENSMUST00000161459.8 |
||
| CDS-3UTR GCA 90 bp | TGTAATAACACTGTGATACTTGATGAGTGCCCTTATTTTGCTTCTAACCTAAGAGAATTTTTCACAATGTaGTGTTGCTCTCTTCCATTT | + |
|
Preference number: 4 (lower is better) Translates to: CNNTVILDECPYFASNLREFFTM*CCSLPF Trigger: AAATGGAAGAGAGCAACAGCACATTGTGAAAAATTC...TCTTAGGTTAGAAGCAAAATAAGGGCACTCATCAAGTATCACAGTGTTATTACA 34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000095775.10 ENSMUST00000161459.8 |
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| CDS CCA 90 bp | ACTGAGCTGCATCAGGGAAGCAGATGGAATCTTTGTCCTCTCACTTaGCAGCTCCTCATCACACAAGGCCTGCTGGCTTTGAGAGGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: TELHQGSRWNLCPLT*QLLITQGLLALRGC Trigger: GCAGCCTCTCAAAGCCAGCAGGCCTTGTGTGATGAGGAGCTGCCAAGTGAGAGGACAAAGATTCCATCTGCTTCCCTGATGCAGCTCAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095775.10 ENSMUST00000161459.8 |
||
| CDS CCA 90 bp | CTGGCTTTGAGAGGCTGCAGGCTCTTCCTCTTGGGACTTCTTTCCTaGGACTTCAAGCACCTGTTTAGTGTCCTTACGATCCACTATGGT | + |
|
Preference number: 5 (lower is better) Translates to: LALRGCRLFLLGLLS*DFKHLFSVLTIHYG Trigger: ACCATAGTGGATCGTAAGGACACTAAACAGGTGCTTGAAGTCCCAGGAAAGAAGTCCCAAGAGGAAGAGCCTGCAGCCTCTCAAAGCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095775.10 ENSMUST00000161459.8 |
||
| CDS-3UTR CAA 90 bp | TTGAAAGCTCAGGAAAGCTCACTGAACTCGGTGGCAGAGGAGAAGGGGTCAGACATCCTTTTCCAGTGTTaGCGTGTTACTCAGAGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: LKAQESSLNSVAEEKGSDILFQC*RVTQSG Trigger: GCCACTCTGAGTAACACGCAAACACTGGAAAAGGAT...GTCTGACCCCTTCTCCTCTGCCACCGAGTTCAGTGAGCTTTCCTGAGCTTTCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111253.3 |
||
| CDS TCA 90 bp | AAGAATGAGAGTTTGTCTTTGCATGTCGTCTTTGGAAGTGACATCTaGTTGGTAGCTGCAGGGGGTTTTCTCCCTTCAAGGACAGTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: KNESLSLHVVFGSDI*LVAAGGFLPSRTVG Trigger: CCCCACTGTCCTTGAAGGGAGAAAACCCCCTGCAGCTACCAATCAGATGTCACTTCCAAAGACGACATGCAAAGACAAACTCTCATTCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000095775.10 ENSMUST00000161459.8 |
||
| CDS GCA 90 bp | CCTTCTTTTGAAGCATCCAATAGAAACAGACTCTCCTTACTGAGCTaGATCAGGGAAGCAGATGGAATCTTTGTCCTCTCACTTGGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: PSFEASNRNRLSLLS*IREADGIFVLSLGS Trigger: GCTGCCAAGTGAGAGGACAAAGATTCCATCTGCTTCCCTGATGCAGCTCAGTAAGGAGAGTCTGTTTCTATTGGATGCTTCAAAAGAAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095775.10 ENSMUST00000161459.8 |
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| CDS GCA 90 bp | TTTAGTGTCCTTACGATCCACTATGGTTGCGTGCTTACACCTGTATaGTGGGGCAGAGTCTTCTCTACTTGCAGTTATATCTATCACGTC | + |
|
Preference number: 5 (lower is better) Translates to: FSVLTIHYGCVLTPV*WGRVFSTCSYIYHV Trigger: GACGTGATAGATATAACTGCAAGTAGAGAAGACTCTGCCCCAGCATACAGGTGTAAGCACGCAACCATAGTGGATCGTAAGGACACTAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095775.10 ENSMUST00000161459.8 |
||
| CDS-3UTR CAA 90 bp | TGTAATAACACTGTGATACTTGATGAGTGCCCTTATTTTGCTTCTAACCTAAGACAAGGCCTGCTGGCTTaGAGAGGCTGCAGGCTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: CNNTVILDECPYFASNLRQGLLA*RGCRLF Trigger: GAAGAGCCTGCAGCCTCTCAAAGCCAGCAGGCCTTG...TCTTAGGTTAGAAGCAAAATAAGGGCACTCATCAAGTATCACAGTGTTATTACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095775.10 ENSMUST00000161459.8 |
||
| CDS-3UTR CAA 90 bp | TGTAATAACACTGTGATACTTGATGAGTGCCCTTATTTTGCTTCTAACCTAAGAGGCAGAGGATTTCCTTaGCAGGCGTGGCCCCAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: CNNTVILDECPYFASNLRGRGFP*QAWPQL Trigger: AAGCTGGGGCCACGCCTGCAAAGGAAATCCTCTGCC...TCTTAGGTTAGAAGCAAAATAAGGGCACTCATCAAGTATCACAGTGTTATTACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095775.10 ENSMUST00000161459.8 |
||
| CDS TCA 90 bp | CCTCTGCAGTCTTTTGTATTTATATCCAGCACATTCTCCATCCGATaGCAAGGGACATGCCTTGGCATTCTTTGCTGTCAACTGAAGACA | + |
|
Preference number: 5 (lower is better) Translates to: PLQSFVFISSTFSIR*QGTCLGILCCQLKT Trigger: TGTCTTCAGTTGACAGCAAAGAATGCCAAGGCATGTCCCTTGTCATCGGATGGAGAATGTGCTGGATATAAATACAAAAGACTGCAGAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095775.10 ENSMUST00000161459.8 |
||
| CDS-3UTR CAA 90 bp | CACAGTCAGGGGACTTATAAAAGCATGGGCTTAGGTTTCTGTATGAGCACATTACAGAGGGAACCGCACTaGATTTGTTTTCCTGTTCAC | + |
|
Preference number: 5 (lower is better) Translates to: HSQGTYKSMGLGFCMSTLQREPH*ICFPVH Trigger: GTGAACAGGAAAACAAATCAAGTGCGGTTCCCTCTG...TAATGTGCTCATACAGAAACCTAAGCCCATGCTTTTATAAGTCCCCTGACTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000111253.3 |
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| CDS-3UTR CAA 90 bp | TGTAATAACACTGTGATACTTGATGAGTGCCCTTATTTTGCTTCTAACCTAAGAAGATCACCACTAAGCTaGGGAGGGCAGTCCTCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: CNNTVILDECPYFASNLRRSPLS*GGQSSA Trigger: GGCTGAGGACTGCCCTCCCAAGCTTAGTGGTGATCT...TCTTAGGTTAGAAGCAAAATAAGGGCACTCATCAAGTATCACAGTGTTATTACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095775.10 ENSMUST00000161459.8 |
||
| CDS TCA 90 bp | CATTTCCTTCTTTTGAAGCATCCAATAGAAACAGACTCTCCTTACTaGGCTGCATCAGGGAAGCAGATGGAATCTTTGTCCTCTCACTTG | + |
|
Preference number: 5 (lower is better) Translates to: HFLLLKHPIETDSPY*AASGKQMESLSSHL Trigger: CAAGTGAGAGGACAAAGATTCCATCTGCTTCCCTGATGCAGCTCAGTAAGGAGAGTCTGTTTCTATTGGATGCTTCAAAAGAAGGAAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095775.10 ENSMUST00000161459.8 |
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| CDS-3UTR CAA 90 bp | TGTAATAACACTGTGATACTTGATGAGTGCCCTTATTTTGCTTCTAACCTAAGATGCAGGCTCTTCCTCTaGGGACTTCTTTCCTGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: CNNTVILDECPYFASNLRCRLFL*GLLSWD Trigger: GTCCCAGGAAAGAAGTCCCAAGAGGAAGAGCCTGCA...TCTTAGGTTAGAAGCAAAATAAGGGCACTCATCAAGTATCACAGTGTTATTACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095775.10 ENSMUST00000161459.8 |
||
| CDS GCA 90 bp | TCCATTAGACAAGTCCTGGAGCAGATATGGCGATGGAAAGATATATaGAGTGGGGCTTCCTTTTTCACTAAATTGTCAGCTTTATTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SIRQVLEQIWRWKDI*SGASFFTKLSALFF Trigger: GAAGAATAAAGCTGACAATTTAGTGAAAAAGGAAGCCCCACTGCATATATCTTTCCATCGCCATATCTGCTCCAGGACTTGTCTAATGGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000095775.10 ENSMUST00000161459.8 |
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| CDS CCA 90 bp | TCACAGGTGTATGATCCTTTTCCAGTGTTTGCGTGTTACTCAGAGTaGCTTCATTTACTAGATTCATTGCTTGGACATAGTCTCCATTTG | + |
|
Preference number: 5 (lower is better) Translates to: SQVYDPFPVFACYSE*LHLLDSLLGHSLHL Trigger: CAAATGGAGACTATGTCCAAGCAATGAATCTAGTAAATGAAGCCACTCTGAGTAACACGCAAACACTGGAAAAGGATCATACACCTGTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111253.3 ENSMUST00000161459.8 |
||
| CDS-3UTR CAA 90 bp | TGTAATAACACTGTGATACTTGATGAGTGCCCTTATTTTGCTTCTAACCTAAGAACCCTTTTCCAGTGTTaGCGTGTTACTCAGAGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: CNNTVILDECPYFASNLRTLFQC*RVTQSG Trigger: GCCACTCTGAGTAACACGCAAACACTGGAAAAGGGT...TCTTAGGTTAGAAGCAAAATAAGGGCACTCATCAAGTATCACAGTGTTATTACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095775.10 |
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| CDS-3UTR CAA 90 bp | TGTAATAACACTGTGATACTTGATGAGTGCCCTTATTTTGCTTCTAACCTAAGACCCTTCTTCTCACTTTaGAACACCTGTAGCCTCACC | + |
|
Preference number: 5 (lower is better) Translates to: CNNTVILDECPYFASNLRPFFSL*NTCSLT Trigger: GGTGAGGCTACAGGTGTTCAAAAGTGAGAAGAAGGG...TCTTAGGTTAGAAGCAAAATAAGGGCACTCATCAAGTATCACAGTGTTATTACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095775.10 ENSMUST00000161459.8 |
||
| CDS-3UTR CAA 90 bp | TGTAATAACACTGTGATACTTGATGAGTGCCCTTATTTTGCTTCTAACCTAAGACAGAGGGAACCGCACTaGATTTGTTTTCCTGTTCAC | + |
|
Preference number: 5 (lower is better) Translates to: CNNTVILDECPYFASNLRQREPH*ICFPVH Trigger: GTGAACAGGAAAACAAATCAAGTGCGGTTCCCTCTG...TCTTAGGTTAGAAGCAAAATAAGGGCACTCATCAAGTATCACAGTGTTATTACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095775.10 ENSMUST00000161459.8 |
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| CDS-3UTR CAA 90 bp | TGTAATAACACTGTGATACTTGATGAGTGCCCTTATTTTGCTTCTAACCTAAGACACACAAATGTCCCTTaGTCAATGTCATCCAGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: CNNTVILDECPYFASNLRHTNVP*SMSSRQ Trigger: CTGCCTGGATGACATTGACAAAGGGACATTTGTGTG...TCTTAGGTTAGAAGCAAAATAAGGGCACTCATCAAGTATCACAGTGTTATTACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095775.10 ENSMUST00000161459.8 |
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| CDS-3UTR CAA 90 bp | TGTAATAACACTGTGATACTTGATGAGTGCCCTTATTTTGCTTCTAACCTAAGAAATCTCCAGCTGGGTTaGAACTTAAGTCCTCGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: CNNTVILDECPYFASNLRNLQLG*NLSPRE Trigger: CTCACGAGGACTTAAGTTCAAACCCAGCTGGAGATT...TCTTAGGTTAGAAGCAAAATAAGGGCACTCATCAAGTATCACAGTGTTATTACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095775.10 ENSMUST00000161459.8 |
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| CDS-3UTR CAA 90 bp | TGTAATAACACTGTGATACTTGATGAGTGCCCTTATTTTGCTTCTAACCTAAGAATCCTTTTCCAGTGTTaGCGTGTTACTCAGAGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: CNNTVILDECPYFASNLRILFQC*RVTQSG Trigger: GCCACTCTGAGTAACACGCAAACACTGGAAAAGGAT...TCTTAGGTTAGAAGCAAAATAAGGGCACTCATCAAGTATCACAGTGTTATTACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161459.8 |
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| CDS-3UTR CAA 90 bp | TGTAATAACACTGTGATACTTGATGAGTGCCCTTATTTTGCTTCTAACCTAAGACTTTGCATGTCGTCTTaGGAAGTGACATCTGATTGG | + |
|
Preference number: 5 (lower is better) Translates to: CNNTVILDECPYFASNLRLCMSS*EVTSDW Trigger: CCAATCAGATGTCACTTCCAAAGACGACATGCAAAG...TCTTAGGTTAGAAGCAAAATAAGGGCACTCATCAAGTATCACAGTGTTATTACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095775.10 ENSMUST00000161459.8 |
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| CDS-3UTR CAA 90 bp | TGTAATAACACTGTGATACTTGATGAGTGCCCTTATTTTGCTTCTAACCTAAGAACGTTAGTTCTGTCCTaGCTTTCACATACCTGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: CNNTVILDECPYFASNLRTLVLS*LSHTCW Trigger: CCAACAGGTATGTGAAAGCAAGGACAGAACTAACGT...TCTTAGGTTAGAAGCAAAATAAGGGCACTCATCAAGTATCACAGTGTTATTACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095775.10 ENSMUST00000161459.8 |
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| CDS-3UTR CAA 90 bp | TGTAATAACACTGTGATACTTGATGAGTGCCCTTATTTTGCTTCTAACCTAAGATTTCACAATGTGCTGTaGCTCTCTTCCATTTTCACC | + |
|
Preference number: 5 (lower is better) Translates to: CNNTVILDECPYFASNLRFHNVL*LSSIFT Trigger: GGTGAAAATGGAAGAGAGCAACAGCACATTGTGAAA...TCTTAGGTTAGAAGCAAAATAAGGGCACTCATCAAGTATCACAGTGTTATTACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095775.10 ENSMUST00000161459.8 |
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| CDS CCA 90 bp | CAGATGATATATTCGGGGCCATACTGTATTTCTATACTTAAACCGTaGAAGTTTACTGTTGTCAATTTCATTACAGAAAGGAATCGACAC | + |
|
Preference number: 5 (lower is better) Translates to: QMIYSGPYCISILKP*KFTVVNFITERNRH Trigger: GTGTCGATTCCTTTCTGTAATGAAATTGACAACAGTAAACTTCCACGGTTTAAGTATAGAAATACAGTATGGCCCCGAATATATCATCTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095775.10 ENSMUST00000161459.8 |
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| CDS-3UTR CAA 90 bp | TGTAATAACACTGTGATACTTGATGAGTGCCCTTATTTTGCTTCTAACCTAAGAAATGAGAGTTTGTCTTaGCATGTCGTCTTTGGAAGT | + |
|
Preference number: 5 (lower is better) Translates to: CNNTVILDECPYFASNLRNESLS*HVVFGS Trigger: ACTTCCAAAGACGACATGCAAAGACAAACTCTCATT...TCTTAGGTTAGAAGCAAAATAAGGGCACTCATCAAGTATCACAGTGTTATTACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095775.10 ENSMUST00000161459.8 |
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| CDS-3UTR CAA 90 bp | TGTAATAACACTGTGATACTTGATGAGTGCCCTTATTTTGCTTCTAACCTAAGACAGAAGAATGAGAGTTaGTCTTTGCATGTCGTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: CNNTVILDECPYFASNLRQKNES*SLHVVF Trigger: AAAGACGACATGCAAAGACAAACTCTCATTCTTCTG...TCTTAGGTTAGAAGCAAAATAAGGGCACTCATCAAGTATCACAGTGTTATTACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095775.10 ENSMUST00000161459.8 |
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| CDS-3UTR CAA 90 bp | TGTAATAACACTGTGATACTTGATGAGTGCCCTTATTTTGCTTCTAACCTAAGACTGGATAACTCGGTTTaGACACATCTGTTTGTTACA | + |
|
Preference number: 5 (lower is better) Translates to: CNNTVILDECPYFASNLRLDNSV*THLFVT Trigger: TGTAACAAACAGATGTGTCAAAACCGAGTTATCCAG...TCTTAGGTTAGAAGCAAAATAAGGGCACTCATCAAGTATCACAGTGTTATTACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095775.10 ENSMUST00000161459.8 |
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| CDS-3UTR CAA 90 bp | TGTAATAACACTGTGATACTTGATGAGTGCCCTTATTTTGCTTCTAACCTAAGAAGAGTTCACGTGTTCTaGAGCTGGTTTAAATCCATT | + |
|
Preference number: 5 (lower is better) Translates to: CNNTVILDECPYFASNLRRVHVF*SWFKSI Trigger: AATGGATTTAAACCAGCTCAAGAACACGTGAACTCT...TCTTAGGTTAGAAGCAAAATAAGGGCACTCATCAAGTATCACAGTGTTATTACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095775.10 ENSMUST00000161459.8 |
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| CDS-3UTR CAA 90 bp | TGTAATAACACTGTGATACTTGATGAGTGCCCTTATTTTGCTTCTAACCTAAGACAGAGTCTTCTCTACTaGCAGTTATATCTATCACGT | + |
|
Preference number: 5 (lower is better) Translates to: CNNTVILDECPYFASNLRQSLLY*QLYLSR Trigger: ACGTGATAGATATAACTGCAAGTAGAGAAGACTCTG...TCTTAGGTTAGAAGCAAAATAAGGGCACTCATCAAGTATCACAGTGTTATTACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095775.10 ENSMUST00000161459.8 |
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| CDS TCA 90 bp | TGGAAGTTTACTGTTGTCAATTTCATTACAGAAAGGAATCGACACTaGTTCCACTCCATTACTAATATCCACGTCAGAAACAACTTCATT | + |
|
Preference number: 5 (lower is better) Translates to: WKFTVVNFITERNRH*FHSITNIHVRNNFI Trigger: AATGAAGTTGTTTCTGACGTGGATATTAGTAATGGAGTGGAATCAGTGTCGATTCCTTTCTGTAATGAAATTGACAACAGTAAACTTCCA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095775.10 ENSMUST00000161459.8 |
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| CDS CAA 90 bp | TGTCCTCTCACTTGGCAGCTCCTCATCACACAAGGCCTGCTGGCTTaGAGAGGCTGCAGGCTCTTCCTCTTGGGACTTCTTTCCTGGGAC | + |
|
Preference number: 6 (lower is better) Translates to: CPLTWQLLITQGLLA*RGCRLFLLGLLSWD Trigger: GTCCCAGGAAAGAAGTCCCAAGAGGAAGAGCCTGCAGCCTCTCAAAGCCAGCAGGCCTTGTGTGATGAGGAGCTGCCAAGTGAGAGGACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095775.10 ENSMUST00000161459.8 |
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| CDS TCA 72 bp | CTTGGCAGCTCCTCATCACACAAGGCCTGCTGGCTTTaGGAGGCTGCAGGCTCTTCCTCTTGGGACTTCTTT | + |
|
Preference number: 6 (lower is better) Translates to: LGSSSSHKACWL*EAAGSSSWDFF Trigger: AAAGAAGTCCCAAGAGGAAGAGCCTGCAGCCTCTCAAAGCCAGCAGGCCTTGTGTGATGAGGAGCTGCCAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095775.10 ENSMUST00000161459.8 |
||
| CDS CAA 72 bp | GGCCTGCTGGCTTTGAGAGGCTGCAGGCTCTTCCTCTaGGGACTTCTTTCCTGGGACTTCAAGCACCTGTTT | + |
|
Preference number: 6 (lower is better) Translates to: GLLALRGCRLFL*GLLSWDFKHLF Trigger: AAACAGGTGCTTGAAGTCCCAGGAAAGAAGTCCCAAGAGGAAGAGCCTGCAGCCTCTCAAAGCCAGCAGGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095775.10 ENSMUST00000161459.8 |
||
| CDS CAA 72 bp | ACTTGGCAGCTCCTCATCACACAAGGCCTGCTGGCTTaGAGAGGCTGCAGGCTCTTCCTCTTGGGACTTCTT | + |
|
Preference number: 6 (lower is better) Translates to: TWQLLITQGLLA*RGCRLFLLGLL Trigger: AAGAAGTCCCAAGAGGAAGAGCCTGCAGCCTCTCAAAGCCAGCAGGCCTTGTGTGATGAGGAGCTGCCAAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095775.10 ENSMUST00000161459.8 |
||
| CDS CCA 72 bp | CATCAGGGAAGCAGATGGAATCTTTGTCCTCTCACTTaGCAGCTCCTCATCACACAAGGCCTGCTGGCTTTG | + |
|
Preference number: 6 (lower is better) Translates to: HQGSRWNLCPLT*QLLITQGLLAL Trigger: CAAAGCCAGCAGGCCTTGTGTGATGAGGAGCTGCCAAGTGAGAGGACAAAGATTCCATCTGCTTCCCTGATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095775.10 ENSMUST00000161459.8 |
||
| CDS CAA 72 bp | GCATCAGGGAAGCAGATGGAATCTTTGTCCTCTCACTaGGCAGCTCCTCATCACACAAGGCCTGCTGGCTTT | + |
|
Preference number: 6 (lower is better) Translates to: ASGKQMESLSSH*AAPHHTRPAGF Trigger: AAAGCCAGCAGGCCTTGTGTGATGAGGAGCTGCCAAGTGAGAGGACAAAGATTCCATCTGCTTCCCTGATGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095775.10 ENSMUST00000161459.8 |
||
| CDS CCA 72 bp | CAGACTCTCCTTACTGAGCTGCATCAGGGAAGCAGATaGAATCTTTGTCCTCTCACTTGGCAGCTCCTCATC | + |
|
Preference number: 6 (lower is better) Translates to: QTLLTELHQGSR*NLCPLTWQLLI Trigger: GATGAGGAGCTGCCAAGTGAGAGGACAAAGATTCCATCTGCTTCCCTGATGCAGCTCAGTAAGGAGAGTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095775.10 ENSMUST00000161459.8 |
||
| CDS TCA 72 bp | AGCCTCACCCGGACACCATGCTGGATAACTCGGTTTTaGCACATCTGTTTGTTACACTTGCAGAGCAGGTTG | + |
|
Preference number: 6 (lower is better) Translates to: SLTRTPCWITRF*HICLLHLQSRL Trigger: CAACCTGCTCTGCAAGTGTAACAAACAGATGTGTCAAAACCGAGTTATCCAGCATGGTGTCCGGGTGAGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095775.10 ENSMUST00000161459.8 |
||
| CDS GCA 72 bp | AAGCACCTGTTTAGTGTCCTTACGATCCACTATGGTTaGGTGCTTACACCTGTATGCTGGGGCAGAGTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: KHLFSVLTIHYG*VLTPVCWGRVF Trigger: GAAGACTCTGCCCCAGCATACAGGTGTAAGCACGCAACCATAGTGGATCGTAAGGACACTAAACAGGTGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095775.10 ENSMUST00000161459.8 |
||
| CDS TCA 72 bp | AGTTTGTCTTTGCATGTCGTCTTTGGAAGTGACATCTaGTTGGTAGCTGCAGGGGGTTTTCTCCCTTCAAGG | + |
|
Preference number: 6 (lower is better) Translates to: SLSLHVVFGSDI*LVAAGGFLPSR Trigger: CCTTGAAGGGAGAAAACCCCCTGCAGCTACCAATCAGATGTCACTTCCAAAGACGACATGCAAAGACAAACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000095775.10 ENSMUST00000161459.8 |
||
| CDS CCA 72 bp | AGTGGGGTTTCCATTAGACAAGTCCTGGAGCAGATATaGCGATGGAAAGATATATGCAGTGGGGCTTCCTTT | + |
|
Preference number: 6 (lower is better) Translates to: SGVSIRQVLEQI*RWKDICSGASF Trigger: AAAGGAAGCCCCACTGCATATATCTTTCCATCGCCATATCTGCTCCAGGACTTGTCTAATGGAAACCCCACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000095775.10 ENSMUST00000161459.8 |
||
| CDS CCA 72 bp | CCTTCAAGGACAGTGGGGTTTCCATTAGACAAGTCCTaGAGCAGATATGGCGATGGAAAGATATATGCAGTG | + |
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Preference number: 6 (lower is better) Translates to: PSRTVGFPLDKS*SRYGDGKIYAV Trigger: CACTGCATATATCTTTCCATCGCCATATCTGCTCCAGGACTTGTCTAATGGAAACCCCACTGTCCTTGAAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095775.10 ENSMUST00000161459.8 |
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| CDS CCA 72 bp | CAGCACATTCTCCATCCGATGACAAGGGACATGCCTTaGCATTCTTTGCTGTCAACTGAAGACATGCACATT | + |
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Preference number: 6 (lower is better) Translates to: QHILHPMTRDMP*HSLLSTEDMHI Trigger: AATGTGCATGTCTTCAGTTGACAGCAAAGAATGCCAAGGCATGTCCCTTGTCATCGGATGGAGAATGTGCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095775.10 ENSMUST00000161459.8 |
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| CDS CAA 72 bp | GAAATATTTCTATGGTTCATTTCCACAGCGGGCTCTTaGAGATCACCACTAAGCTTGGGAGGGCAGTCCTCA | + |
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Preference number: 6 (lower is better) Translates to: EIFLWFISTAGS*RSPLSLGGQSS Trigger: TGAGGACTGCCCTCCCAAGCTTAGTGGTGATCTCAAAGAGCCCGCTGTGGAAATGAACCATAGAAATATTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095775.10 ENSMUST00000161459.8 |
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| CDS CAA 72 bp | CTCGTGAGCTCTCCTAGCTTCAGAGTTCACGTGTTCTaGAGCTGGTTTAAATCCATTCTTATCTTCTGGGGC | + |
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Preference number: 6 (lower is better) Translates to: LVSSPSFRVHVF*SWFKSILIFWG Trigger: GCCCCAGAAGATAAGAATGGATTTAAACCAGCTCAAGAACACGTGAACTCTGAAGCTAGGAGAGCTCACGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095775.10 ENSMUST00000161459.8 |
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| CDS CAA 90 bp | CGGATAACATATACATACGGGATAGTACAGCCCTTAGGACAGGAGTaGTCACATGATGCAGAGGGAACCGCACTTGATTTGTTTTCCTGT | + |
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Preference number: 6 (lower is better) Translates to: RITYTYGIVQPLGQE*SHDAEGTALDLFSC Trigger: ACAGGAAAACAAATCAAGTGCGGTTCCCTCTGCATCATGTGACAACTCCTGTCCTAAGGGCTGTACTATCCCGTATGTATATGTTATCCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111253.3 |
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| CDS GCA 72 bp | GAAGCATCCAATAGAAACAGACTCTCCTTACTGAGCTaGATCAGGGAAGCAGATGGAATCTTTGTCCTCTCA | + |
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Preference number: 6 (lower is better) Translates to: EASNRNRLSLLS*IREADGIFVLS Trigger: TGAGAGGACAAAGATTCCATCTGCTTCCCTGATGCAGCTCAGTAAGGAGAGTCTGTTTCTATTGGATGCTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095775.10 ENSMUST00000161459.8 |
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| CDS CCA 72 bp | ACGATCCACTATGGTTGCGTGCTTACACCTGTATGCTaGGGCAGAGTCTTCTCTACTTGCAGTTATATCTAT | + |
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Preference number: 6 (lower is better) Translates to: TIHYGCVLTPVC*GRVFSTCSYIY Trigger: ATAGATATAACTGCAAGTAGAGAAGACTCTGCCCCAGCATACAGGTGTAAGCACGCAACCATAGTGGATCGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095775.10 ENSMUST00000161459.8 |
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| CDS CAA 72 bp | GCTTACACCTGTATGCTGGGGCAGAGTCTTCTCTACTaGCAGTTATATCTATCACGTCTGATTCAGTCAGCT | + |
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Preference number: 6 (lower is better) Translates to: AYTCMLGQSLLY*QLYLSRLIQSA Trigger: AGCTGACTGAATCAGACGTGATAGATATAACTGCAAGTAGAGAAGACTCTGCCCCAGCATACAGGTGTAAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095775.10 ENSMUST00000161459.8 |
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| CDS TCA 72 bp | CTTTTGAAGCATCCAATAGAAACAGACTCTCCTTACTaGGCTGCATCAGGGAAGCAGATGGAATCTTTGTCC | + |
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Preference number: 6 (lower is better) Translates to: LLKHPIETDSPY*AASGKQMESLS Trigger: GGACAAAGATTCCATCTGCTTCCCTGATGCAGCTCAGTAAGGAGAGTCTGTTTCTATTGGATGCTTCAAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095775.10 ENSMUST00000161459.8 |
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| CDS TCA 72 bp | CATTCTGCACCCAGAGATTTGGACAGCAACTATGATTaGGGAAACGGCCCACATTTCCTTCTTTTGAAGCAT | + |
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Preference number: 6 (lower is better) Translates to: HSAPRDLDSNYD*GNGPHFLLLKH Trigger: ATGCTTCAAAAGAAGGAAATGTGGGCCGTTTCCTCAATCATAGTTGCTGTCCAAATCTCTGGGTGCAGAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095775.10 ENSMUST00000161459.8 |
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| CDS GCA 72 bp | CAAGTCCTGGAGCAGATATGGCGATGGAAAGATATATaGAGTGGGGCTTCCTTTTTCACTAAATTGTCAGCT | + |
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Preference number: 6 (lower is better) Translates to: QVLEQIWRWKDI*SGASFFTKLSA Trigger: AGCTGACAATTTAGTGAAAAAGGAAGCCCCACTGCATATATCTTTCCATCGCCATATCTGCTCCAGGACTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000095775.10 ENSMUST00000161459.8 |
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| CDS CCA 72 bp | GTTTCCATTAGACAAGTCCTGGAGCAGATATGGCGATaGAAAGATATATGCAGTGGGGCTTCCTTTTTCACT | + |
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Preference number: 6 (lower is better) Translates to: VSIRQVLEQIWR*KDICSGASFFT Trigger: AGTGAAAAAGGAAGCCCCACTGCATATATCTTTCCATCGCCATATCTGCTCCAGGACTTGTCTAATGGAAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000095775.10 ENSMUST00000161459.8 |
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| CDS CAA 72 bp | GCGTGTTACTCAGAGTGGCTTCATTTACTAGATTCATaGCTTGGACATAGTCTCCATTTGTGGCAGACCCAT | + |
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Preference number: 6 (lower is better) Translates to: ACYSEWLHLLDS*LGHSLHLWQTH Trigger: ATGGGTCTGCCACAAATGGAGACTATGTCCAAGCAATGAATCTAGTAAATGAAGCCACTCTGAGTAACACGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095775.10 ENSMUST00000111253.3 ENSMUST00000161459.8 |
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| CDS CAA 90 bp | CCAGTGTTTGCGTGTTACTCAGAGTGGCTTCATTTACTAGATTCATaGCTTGGACATAGTCTCCATTTGTGGCAGACCCATCCTTTATCT | + |
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Preference number: 6 (lower is better) Translates to: PVFACYSEWLHLLDS*LGHSLHLWQTHPLS Trigger: AGATAAAGGATGGGTCTGCCACAAATGGAGACTATGTCCAAGCAATGAATCTAGTAAATGAAGCCACTCTGAGTAACACGCAAACACTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000095775.10 ENSMUST00000111253.3 ENSMUST00000161459.8 |
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| CDS TCA 72 bp | AGAGTCTTCTCTACTTGCAGTTATATCTATCACGTCTaGTTCAGTCAGCTGTGTGTCTTCAGAATCTCCAGC | + |
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Preference number: 6 (lower is better) Translates to: RVFSTCSYIYHV*FSQLCVFRISS Trigger: GCTGGAGATTCTGAAGACACACAGCTGACTGAATCAGACGTGATAGATATAACTGCAAGTAGAGAAGACTCT 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095775.10 ENSMUST00000161459.8 |
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| CDS TCA 72 bp | TTTAAATCCATTCTTATCTTCTGGGGCGGCAGAATCTaGGCAAACAAATCCCATGTTTTTCTCACTGTAATG | + |
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Preference number: 6 (lower is better) Translates to: FKSILIFWGGRI*ANKSHVFLTVM Trigger: CATTACAGTGAGAAAAACATGGGATTTGTTTGCTCAGATTCTGCCGCCCCAGAAGATAAGAATGGATTTAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000095775.10 ENSMUST00000161459.8 |
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| CDS TCA 72 bp | ACTGTTGTCAATTTCATTACAGAAAGGAATCGACACTaGTTCCACTCCATTACTAATATCCACGTCAGAAAC | + |
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Preference number: 6 (lower is better) Translates to: TVVNFITERNRH*FHSITNIHVRN Trigger: GTTTCTGACGTGGATATTAGTAATGGAGTGGAATCAGTGTCGATTCCTTTCTGTAATGAAATTGACAACAGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000095775.10 ENSMUST00000161459.8 |
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| CDS CCA 72 bp | ACTAATATCCACGTCAGAAACAACTTCATTTTGCTTTaGGTGATTCCGAGTCAACTGGACATAAGTATTGAA | + |
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Preference number: 6 (lower is better) Translates to: TNIHVRNNFILL*VIPSQLDISIE Trigger: TTCAATACTTATGTCCAGTTGACTCGGAATCACCCAAAGCAAAATGAAGTTGTTTCTGACGTGGATATTAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000095775.10 ENSMUST00000161459.8 |
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| CDS CAA 72 bp | AAAGATATATGCAGTGGGGCTTCCTTTTTCACTAAATaGTCAGCTTTATTCTTCACAGGGAGGAATACTTTT | + |
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Preference number: 6 (lower is better) Translates to: KDICSGASFFTK*SALFFTGRNTF Trigger: AAAAGTATTCCTCCCTGTGAAGAATAAAGCTGACAATTTAGTGAAAAAGGAAGCCCCACTGCATATATCTTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000095775.10 ENSMUST00000161459.8 |
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