Pregenerated sensors for SETD4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022948Ensembl transcript IDs: ENSMUST00000023669.14, ENSMUST00000154355.3, ENSMUST00000232835.2, ENSMUST00000232870.2, ENSMUST00000233324.2, ENSMUST00000233931.2
Found 72 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GTGGAGCTGCTTATCTGCTGCAGGGAGGAACTTAACCAGCATGTCTaGCGAGACAGGAACGCAGGCGTGAGGATTGCGGACGGAGACAAA | + |
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Preference number: 1 (lower is better) Translates to: VELLICCREELNQHV*RDRNAGVRIADGDK Trigger: TTTGTCTCCGTCCGCAATCCTCACGCCTGCGTTCCTGTCTCGGCAGACATGCTGGTTAAGTTCCTCCCTGCAGCAGATAAGCAGCTCCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233324.2 |
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| 3UTR GCA 90 bp | GACACTGTCCCTTCCTTCATGTCAGAAACCTTGCGCAGCACAGCGTaGGTCTCCTCGATGACGTCAGAGCATATTTTCTGGGCCACGCCC | + |
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Preference number: 1 (lower is better) Translates to: DTVPSFMSETLRSTA*VSSMTSEHIFWATP Trigger: GGGCGTGGCCCAGAAAATATGCTCTGACGTCATCGAGGAGACGCACGCTGTGCTGCGCAAGGTTTCTGACATGAAGGAAGGGACAGTGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233324.2 |
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| 3UTR TCA 90 bp | CCTTCATGTCAGAAACCTTGCGCAGCACAGCGTGCGTCTCCTCGATaGCGTCAGAGCATATTTTCTGGGCCACGCCCAAGCTTGTCTTCT | + |
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Preference number: 1 (lower is better) Translates to: PSCQKPCAAQRASPR*RQSIFSGPRPSLSS Trigger: AGAAGACAAGCTTGGGCGTGGCCCAGAAAATATGCTCTGACGTCATCGAGGAGACGCACGCTGTGCTGCGCAAGGTTTCTGACATGAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233324.2 |
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| 3UTR TCA 90 bp | CTCTTCCATCCTCAAGGCTTCCACCAAGGAGAGCTGGCTTCTCAGTaGCACTGTCCCTTCCTTCATGTCAGAAACCTTGCGCAGCACAGC | + |
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Preference number: 1 (lower is better) Translates to: LFHPQGFHQGELASQ*HCPFLHVRNLAQHS Trigger: GCTGTGCTGCGCAAGGTTTCTGACATGAAGGAAGGGACAGTGTCACTGAGAAGCCAGCTCTCCTTGGTGGAAGCCTTGAGGATGGAAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233324.2 |
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| 3UTR CCA 90 bp | CAGGAAAAGGGGGCTAGCAAGCCACTCAGGATCTCAGCAGAAGCCTaGAGAATCCTAAGCTCTTCCATCCTCAAGGCTTCCACCAAGGAG | + |
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Preference number: 1 (lower is better) Translates to: QEKGASKPLRISAEA*RILSSSILKASTKE Trigger: CTCCTTGGTGGAAGCCTTGAGGATGGAAGAGCTTAGGATTCTCCAGGCTTCTGCTGAGATCCTGAGTGGCTTGCTAGCCCCCTTTTCCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000232835.2 ENSMUST00000233324.2 |
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| 3UTR CCA 90 bp | CGCAGCACAGCGTGCGTCTCCTCGATGACGTCAGAGCATATTTTCTaGGCCACGCCCAAGCTTGTCTTCTCGTTTGTATCGGAGATGACT | + |
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Preference number: 1 (lower is better) Translates to: RSTACVSSMTSEHIF*ATPKLVFSFVSEMT Trigger: AGTCATCTCCGATACAAACGAGAAGACAAGCTTGGGCGTGGCCCAGAAAATATGCTCTGACGTCATCGAGGAGACGCACGCTGTGCTGCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233324.2 |
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| 3UTR GCA 90 bp | ATGATCCTTCAAAATGGTTATCTTCCTGTGGAGCTGCTTATCTGCTaGAGGGAGGAACTTAACCAGCATGTCTGCCGAGACAGGAACGCA | + |
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Preference number: 1 (lower is better) Translates to: MILQNGYLPVELLIC*REELNQHVCRDRNA Trigger: TGCGTTCCTGTCTCGGCAGACATGCTGGTTAAGTTCCTCCCTGCAGCAGATAAGCAGCTCCACAGGAAGATAACCATTTTGAAGGATCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233324.2 |
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| 3UTR CAA 90 bp | ACCTTTTTCCAGGATGTGAAGCGCTCGGCTTCCAGACACAGCAACTaGAGAGCCGTGAGTAGCCTCCAGGACGGCCCATCCCATCCAAAC | + |
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Preference number: 2 (lower is better) Translates to: TFFQDVKRSASRHSN*RAVSSLQDGPSHPN Trigger: GTTTGGATGGGATGGGCCGTCCTGGAGGCTACTCACGGCTCTCAAGTTGCTGTGTCTGGAAGCCGAGCGCTTCACATCCTGGAAAAAGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000233324.2 |
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| 3UTR CAA 90 bp | AGCTGGCTTCTCAGTGACACTGTCCCTTCCTTCATGTCAGAAACCTaGCGCAGCACAGCGTGCGTCTCCTCGATGACGTCAGAGCATATT | + |
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Preference number: 2 (lower is better) Translates to: SWLLSDTVPSFMSET*RSTACVSSMTSEHI Trigger: AATATGCTCTGACGTCATCGAGGAGACGCACGCTGTGCTGCGCAAGGTTTCTGACATGAAGGAAGGGACAGTGTCACTGAGAAGCCAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233324.2 |
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| 3UTR-3UTR GCA 90 bp | CCCAAGCTTGTCTTCTCGTTTGTATCGGAGATGACTTCGCCAAGGAGCACCTTTCGCAGGCGTGAGGATTaGGGACGGAGACAAAGCCAT | + |
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Preference number: 2 (lower is better) Translates to: PKLVFSFVSEMTSPRSTFRRRED*GRRQSH Trigger: ATGGCTTTGTCTCCGTCCGCAATCCTCACGCCTGCG...AAAGGTGCTCCTTGGCGAAGTCATCTCCGATACAAACGAGAAGACAAGCTTGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233324.2 |
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| 3UTR-3UTR GCA 90 bp | GAAACCTTGCGCAGCACAGCGTGCGTCTCCTCGATGACGTCAGAGCATATTTTCATCTTCCTGTGGAGCTaGTTATCTGCTGCAGGGAGG | + |
|
Preference number: 2 (lower is better) Translates to: ETLRSTACVSSMTSEHIFIFLWS*LSAAGR Trigger: CCTCCCTGCAGCAGATAAGCAGCTCCACAGGAAGAT...GAAAATATGCTCTGACGTCATCGAGGAGACGCACGCTGTGCTGCGCAAGGTTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233324.2 |
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| 3UTR-3UTR TCA 90 bp | AGGATCTCAGCAGAAGCCTGGAGAATCCTAAGCTCTTCCATCCTCAAGGCTTCCGAGCTGGCTTCTCAGTaGCACTGTCCCTTCCTTCAT | + |
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Preference number: 2 (lower is better) Translates to: RISAEAWRILSSSILKASELASQ*HCPFLH Trigger: ATGAAGGAAGGGACAGTGTCACTGAGAAGCCAGCTC...GGAAGCCTTGAGGATGGAAGAGCTTAGGATTCTCCAGGCTTCTGCTGAGATCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000232835.2 ENSMUST00000233324.2 |
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| 3UTR-3UTR CCA 90 bp | CAGGAAAAGGGGGCTAGCAAGCCACTCAGGATCTCAGCAGAAGCCTGGAGAATCATCTCAGCAGAAGCCTaGAGAATCCTAAGCTCTTCC | + |
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Preference number: 2 (lower is better) Translates to: QEKGASKPLRISAEAWRIISAEA*RILSSS Trigger: GGAAGAGCTTAGGATTCTCCAGGCTTCTGCTGAGAT...GATTCTCCAGGCTTCTGCTGAGATCCTGAGTGGCTTGCTAGCCCCCTTTTCCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000232835.2 ENSMUST00000233324.2 |
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| 3UTR-3UTR CCA 90 bp | TGTCCCTTCCTTCATGTCAGAAACCTTGCGCAGCACAGCGTGCGTCTCCTCGATATCTCAGCAGAAGCCTaGAGAATCCTAAGCTCTTCC | + |
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Preference number: 2 (lower is better) Translates to: CPFLHVRNLAQHSVRLLDISAEA*RILSSS Trigger: GGAAGAGCTTAGGATTCTCCAGGCTTCTGCTGAGAT...ATCGAGGAGACGCACGCTGTGCTGCGCAAGGTTTCTGACATGAAGGAAGGGACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233324.2 |
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| 3UTR-3UTR TCA 90 bp | GGCCACGCCCAAGCTTGTCTTCTCGTTTGTATCGGAGATGACTTCGCCAAGGAGTTTCCTGTAAAGCCATaGTCCTTCAAAATGGTTATC | + |
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Preference number: 2 (lower is better) Translates to: GHAQACLLVCIGDDFAKEFPVKP*SFKMVI Trigger: GATAACCATTTTGAAGGATCATGGCTTTACAGGAAA...CTCCTTGGCGAAGTCATCTCCGATACAAACGAGAAGACAAGCTTGGGCGTGGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233324.2 |
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| 3UTR-3UTR CCA 90 bp | CTTGTCTTCTCGTTTGTATCGGAGATGACTTCGCCAAGGAGCACCTTTTTCCAGATGGTTATCTTCCTGTaGAGCTGCTTATCTGCTGCA | + |
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Preference number: 2 (lower is better) Translates to: LVFSFVSEMTSPRSTFFQMVIFL*SCLSAA Trigger: TGCAGCAGATAAGCAGCTCCACAGGAAGATAACCAT...CTGGAAAAAGGTGCTCCTTGGCGAAGTCATCTCCGATACAAACGAGAAGACAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000233324.2 |
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| 3UTR GCA 72 bp | GCATGTCTGCCGAGACAGGAACGCAGGCGTGAGGATTaGGGACGGAGACAAAGCCATACTCCAGGAGCAGCC | + |
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Preference number: 3 (lower is better) Translates to: ACLPRQERRRED*GRRQSHTPGAA Trigger: GGCTGCTCCTGGAGTATGGCTTTGTCTCCGTCCGCAATCCTCACGCCTGCGTTCCTGTCTCGGCAGACATGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233324.2 |
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| 3UTR TCA 72 bp | CAGAAACCTTGCGCAGCACAGCGTGCGTCTCCTCGATaGCGTCAGAGCATATTTTCTGGGCCACGCCCAAGC | + |
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Preference number: 3 (lower is better) Translates to: QKPCAAQRASPR*RQSIFSGPRPS Trigger: GCTTGGGCGTGGCCCAGAAAATATGCTCTGACGTCATCGAGGAGACGCACGCTGTGCTGCGCAAGGTTTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233324.2 |
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| 3UTR GCA 72 bp | CTTATCTGCTGCAGGGAGGAACTTAACCAGCATGTCTaGCGAGACAGGAACGCAGGCGTGAGGATTGCGGAC | + |
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Preference number: 3 (lower is better) Translates to: LICCREELNQHV*RDRNAGVRIAD Trigger: GTCCGCAATCCTCACGCCTGCGTTCCTGTCTCGGCAGACATGCTGGTTAAGTTCCTCCCTGCAGCAGATAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233324.2 |
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| 3UTR CCA 72 bp | GGGGCTAGCAAGCCACTCAGGATCTCAGCAGAAGCCTaGAGAATCCTAAGCTCTTCCATCCTCAAGGCTTCC | + |
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Preference number: 3 (lower is better) Translates to: GASKPLRISAEA*RILSSSILKAS Trigger: GGAAGCCTTGAGGATGGAAGAGCTTAGGATTCTCCAGGCTTCTGCTGAGATCCTGAGTGGCTTGCTAGCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000232835.2 ENSMUST00000233324.2 |
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| 3UTR TCA 72 bp | CCTCAAGGCTTCCACCAAGGAGAGCTGGCTTCTCAGTaGCACTGTCCCTTCCTTCATGTCAGAAACTCCAGG | + |
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Preference number: 3 (lower is better) Translates to: PQGFHQGELASQ*HCPFLHVRNSR Trigger: CCTGGAGTTTCTGACATGAAGGAAGGGACAGTGTCACTGAGAAGCCAGCTCTCCTTGGTGGAAGCCTTGAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232835.2 |
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| 3UTR TCA 72 bp | CCTCAAGGCTTCCACCAAGGAGAGCTGGCTTCTCAGTaGCACTGTCCCTTCCTTCATGTCAGAAACCTTGCG | + |
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Preference number: 3 (lower is better) Translates to: PQGFHQGELASQ*HCPFLHVRNLA Trigger: CGCAAGGTTTCTGACATGAAGGAAGGGACAGTGTCACTGAGAAGCCAGCTCTCCTTGGTGGAAGCCTTGAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233324.2 |
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| 3UTR CCA 72 bp | GCGTGCGTCTCCTCGATGACGTCAGAGCATATTTTCTaGGCCACGCCCAAGCTTGTCTTCTCGTTTGTATCG | + |
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Preference number: 3 (lower is better) Translates to: ACVSSMTSEHIF*ATPKLVFSFVS Trigger: CGATACAAACGAGAAGACAAGCTTGGGCGTGGCCCAGAAAATATGCTCTGACGTCATCGAGGAGACGCACGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233324.2 |
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| 3UTR GCA 72 bp | CCTTCCTTCATGTCAGAAACCTTGCGCAGCACAGCGTaGGTCTCCTCGATGACGTCAGAGCATATTTTCTGG | + |
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Preference number: 3 (lower is better) Translates to: PSFMSETLRSTA*VSSMTSEHIFW Trigger: CCAGAAAATATGCTCTGACGTCATCGAGGAGACGCACGCTGTGCTGCGCAAGGTTTCTGACATGAAGGAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233324.2 |
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| 3UTR-3UTR CAA 90 bp | ATTTTCTGGGCCACGCCCAAGCTTGTCTTCTCGTTTGTATCGGAGATGACTTCGTCCAGACACAGCAACTaGAGAGCCGTGAGTAGCCTC | + |
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Preference number: 3 (lower is better) Translates to: IFWATPKLVFSFVSEMTSSRHSN*RAVSSL Trigger: GAGGCTACTCACGGCTCTCAAGTTGCTGTGTCTGGA...CGAAGTCATCTCCGATACAAACGAGAAGACAAGCTTGGGCGTGGCCCAGAAAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233324.2 |
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| 3UTR GCA 72 bp | CAAAATGGTTATCTTCCTGTGGAGCTGCTTATCTGCTaGAGGGAGGAACTTAACCAGCATGTCTGCCGAGAC | + |
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Preference number: 3 (lower is better) Translates to: QNGYLPVELLIC*REELNQHVCRD Trigger: GTCTCGGCAGACATGCTGGTTAAGTTCCTCCCTGCAGCAGATAAGCAGCTCCACAGGAAGATAACCATTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233324.2 |
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| 3UTR GCA 72 bp | CTTCAAAATGGTTATCTTCCTGTGGAGCTGCTTATCTaGTGCAGGGAGGAACTTAACCAGCATGTCTGCCGA | + |
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Preference number: 3 (lower is better) Translates to: LQNGYLPVELLI*CREELNQHVCR Trigger: TCGGCAGACATGCTGGTTAAGTTCCTCCCTGCAGCAGATAAGCAGCTCCACAGGAAGATAACCATTTTGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233324.2 |
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| 3UTR CAA 72 bp | CAGGATGTGAAGCGCTCGGCTTCCAGACACAGCAACTaGAGAGCCGTGAGTAGCCTCCAGGACGGCCCATCC | + |
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Preference number: 4 (lower is better) Translates to: QDVKRSASRHSN*RAVSSLQDGPS Trigger: GGATGGGCCGTCCTGGAGGCTACTCACGGCTCTCAAGTTGCTGTGTCTGGAAGCCGAGCGCTTCACATCCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233324.2 |
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| CDS-3UTR GCA 90 bp | GGCCACGCCCAAGCTTGTCTTCTCGTTTGTATCGGAGATGACTTCGCCAAGGAGCCCTGGTGTTCACCGTaGACCAGGCCCACAGGAAGG | + |
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Preference number: 4 (lower is better) Translates to: GHAQACLLVCIGDDFAKEPWCSP*TRPTGR Trigger: CCTTCCTGTGGGCCTGGTGCACGGTGAACACCAGGG...CTCCTTGGCGAAGTCATCTCCGATACAAACGAGAAGACAAGCTTGGGCGTGGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233324.2 |
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| CDS-3UTR CCA 90 bp | GAAACCTTGCGCAGCACAGCGTGCGTCTCCTCGATGACGTCAGAGCATATTTTCGGCACTCCTGCCTCCTaGACCTCAGGTACACAGCCC | + |
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Preference number: 4 (lower is better) Translates to: ETLRSTACVSSMTSEHIFGTPAS*TSGTQP Trigger: GGGCTGTGTACCTGAGGTCCAGGAGGCAGGAGTGCC...GAAAATATGCTCTGACGTCATCGAGGAGACGCACGCTGTGCTGCGCAAGGTTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233324.2 |
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| CDS-3UTR CCA 90 bp | GAAAAGGGGGCTAGCAAGCCACTCAGGATCTCAGCAGAAGCCTGGAGAATCCTATGGGGAATCCCTGTGTaGACAGCACCCGTCCTCCCC | + |
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Preference number: 4 (lower is better) Translates to: EKGASKPLRISAEAWRILWGIPV*TAPVLP Trigger: GGGGAGGACGGGTGCTGTCCACACAGGGATTCCCCA...TAGGATTCTCCAGGCTTCTGCTGAGATCCTGAGTGGCTTGCTAGCCCCCTTTTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000232835.2 |
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| CDS-3UTR GCA 90 bp | TGTCCCTTCCTTCATGTCAGAAACCTTGCGCAGCACAGCGTGCGTCTCCTCGATGCTGTCCACAGGCTCTaGAAACAGAGGCTGCAGGGT | + |
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Preference number: 4 (lower is better) Translates to: CPFLHVRNLAQHSVRLLDAVHRL*KQRLQG Trigger: ACCCTGCAGCCTCTGTTTGCAGAGCCTGTGGACAGC...ATCGAGGAGACGCACGCTGTGCTGCGCAAGGTTTCTGACATGAAGGAAGGGACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233324.2 |
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| 3UTR CAA 72 bp | CTCAGTGACACTGTCCCTTCCTTCATGTCAGAAACCTaGCGCAGCACAGCGTGCGTCTCCTCGATGACGTCA | + |
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Preference number: 4 (lower is better) Translates to: LSDTVPSFMSET*RSTACVSSMTS Trigger: TGACGTCATCGAGGAGACGCACGCTGTGCTGCGCAAGGTTTCTGACATGAAGGAAGGGACAGTGTCACTGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233324.2 |
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| CDS-3UTR CCA 90 bp | CCATCCTCAAGGCTTCCACCAAGGAGAGCTGGCTTCTCAGTGACACTGTCCCTTAGGGAATCACTGCTCTaGGGAATCCCTGTGTGGACA | + |
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Preference number: 4 (lower is better) Translates to: PSSRLPPRRAGFSVTLSLRESLL*GIPVWT Trigger: TGTCCACACAGGGATTCCCCAGAGCAGTGATTCCCT...AAGGGACAGTGTCACTGAGAAGCCAGCTCTCCTTGGTGGAAGCCTTGAGGATGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232835.2 |
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| CDS-3UTR GCA 90 bp | GGGGCTAGCAAGCCACTCAGGATCTCAGCAGAAGCCTGGAGAATCCTAAGCTCTTCTGCAAACAGAGGCTaGAGGGTAGAGAAGAAGCCT | + |
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Preference number: 4 (lower is better) Translates to: GASKPLRISAEAWRILSSSANRG*RVEKKP Trigger: AGGCTTCTTCTCTACCCTGCAGCCTCTGTTTGCAGA...AGAGCTTAGGATTCTCCAGGCTTCTGCTGAGATCCTGAGTGGCTTGCTAGCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233324.2 |
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| CDS-3UTR GCA 90 bp | CTTGTCTTCTCGTTTGTATCGGAGATGACTTCGCCAAGGAGCACCTTTTTCCAGACACGTGTCCGGCTCTaGGGAAAGGCACTCCTGCCT | + |
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Preference number: 4 (lower is better) Translates to: LVFSFVSEMTSPRSTFFQTRVRL*GKALLP Trigger: AGGCAGGAGTGCCTTTCCGCAGAGCCGGACACGTGT...CTGGAAAAAGGTGCTCCTTGGCGAAGTCATCTCCGATACAAACGAGAAGACAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000233324.2 |
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| CDS-3UTR CCA 90 bp | CAGGAAAAGGGGGCTAGCAAGCCACTCAGGATCTCAGCAGAAGCCTGGAGAATCTCAGAGCATATTTTCTaGGCCACGCCCAAGCTTGTC | + |
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Preference number: 4 (lower is better) Translates to: QEKGASKPLRISAEAWRISEHIF*ATPKLV Trigger: GACAAGCTTGGGCGTGGCCCAGAAAATATGCTCTGA...GATTCTCCAGGCTTCTGCTGAGATCCTGAGTGGCTTGCTAGCCCCCTTTTCCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000232835.2 |
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| CDS-3UTR TCA 90 bp | CTTGTCTTCTCGTTTGTATCGGAGATGACTTCGCCAAGGAGCACCTTTTTCCAGTGCACATGTGGGCTGTaGTTCAGCAGGTCCAGGAAC | + |
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Preference number: 4 (lower is better) Translates to: LVFSFVSEMTSPRSTFFQCTCGL*FSRSRN Trigger: GTTCCTGGACCTGCTGAATCACAGCCCACATGTGCA...CTGGAAAAAGGTGCTCCTTGGCGAAGTCATCTCCGATACAAACGAGAAGACAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000233324.2 |
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| CDS CCA 90 bp | CAAGCGCACACGTGTCCGGCTCTGCGGAAAGGCACTCCTGCCTCCTaGACCTCAGGTACACAGCCCTGGTGTTCACCGTGCACCAGGCCC | + |
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Preference number: 5 (lower is better) Translates to: QAHTCPALRKGTPAS*TSGTQPWCSPCTRP Trigger: GGGCCTGGTGCACGGTGAACACCAGGGCTGTGTACCTGAGGTCCAGGAGGCAGGAGTGCCTTTCCGCAGAGCCGGACACGTGTGCGCTTG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000023669.14 ENSMUST00000154355.3 ENSMUST00000232870.2 ENSMUST00000233324.2 ENSMUST00000233931.2 |
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| CDS GCA 90 bp | AACGGAGCAAGCGCACACGTGTCCGGCTCTGCGGAAAGGCACTCCTaGCTCCTGGACCTCAGGTACACAGCCCTGGTGTTCACCGTGCAC | + |
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Preference number: 5 (lower is better) Translates to: NGASAHVSGSAERHS*LLDLRYTALVFTVH Trigger: GTGCACGGTGAACACCAGGGCTGTGTACCTGAGGTCCAGGAGGCAGGAGTGCCTTTCCGCAGAGCCGGACACGTGTGCGCTTGCTCCGTT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000023669.14 ENSMUST00000154355.3 ENSMUST00000232870.2 ENSMUST00000233324.2 ENSMUST00000233931.2 |
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| CDS GCA 90 bp | ATCCCTGTGTGGACAGCACCCGTCCTCCCCTTGCGCAGCACAGCGTaGGTCTCCTCGATGACGTCAGAGCATATTTTCTGGGCCACGCCC | + |
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Preference number: 5 (lower is better) Translates to: IPVWTAPVLPLRSTA*VSSMTSEHIFWATP Trigger: GGGCGTGGCCCAGAAAATATGCTCTGACGTCATCGAGGAGACGCACGCTGTGCTGCGCAAGGGGAGGACGGGTGCTGTCCACACAGGGAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000232835.2 |
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| CDS TCA 90 bp | CAGCACCCGTCCTCCCCTTGCGCAGCACAGCGTGCGTCTCCTCGATaGCGTCAGAGCATATTTTCTGGGCCACGCCCAAGCTTGTCTTCT | + |
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Preference number: 5 (lower is better) Translates to: QHPSSPCAAQRASPR*RQSIFSGPRPSLSS Trigger: AGAAGACAAGCTTGGGCGTGGCCCAGAAAATATGCTCTGACGTCATCGAGGAGACGCACGCTGTGCTGCGCAAGGGGAGGACGGGTGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000232835.2 |
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| CDS CCA 90 bp | CCTGCACTCGGGCTCTCTGCTCTTCCGCCTTCGCCTTTAAAGGGCTaGGAAGAAGATCTACCACTTCCGGCTCCAAACACACCGGGCAGG | + |
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Preference number: 5 (lower is better) Translates to: PALGLSALPPSPLKG*EEDLPLPAPNTPGR Trigger: CCTGCCCGGTGTGTTTGGAGCCGGAAGTGGTAGATCTTCTTCCCAGCCCTTTAAAGGCGAAGGCGGAAGAGCAGAGAGCCCGAGTGCAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023669.14 ENSMUST00000154355.3 ENSMUST00000232870.2 ENSMUST00000233931.2 |
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| CDS GCA 90 bp | GGCTGCAGGGTAGAGAAGAAGCCTCTAGCGGAGGTAAACAGGTCCTaGACTCGGGCTCTCTGCTCTTCCGCCTTCGCCTTTAAAGGGCTG | + |
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Preference number: 5 (lower is better) Translates to: GCRVEKKPLAEVNRS*TRALCSSAFAFKGL Trigger: CAGCCCTTTAAAGGCGAAGGCGGAAGAGCAGAGAGCCCGAGTGCAGGACCTGTTTACCTCCGCTAGAGGCTTCTTCTCTACCCTGCAGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023669.14 ENSMUST00000154355.3 ENSMUST00000232870.2 ENSMUST00000233931.2 |
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| CDS GCA 90 bp | GGCCCACAGGAAGGCTCGGTAGCTGAAAACGCTGTCCACAGGCTCTaGAAACAGAGGCTGCAGGGTAGAGAAGAAGCCTCTAGCGGAGGT | + |
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Preference number: 5 (lower is better) Translates to: GPQEGSVAENAVHRL*KQRLQGREEASSGG Trigger: ACCTCCGCTAGAGGCTTCTTCTCTACCCTGCAGCCTCTGTTTGCAGAGCCTGTGGACAGCGTTTTCAGCTACCGAGCCTTCCTGTGGGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000023669.14 ENSMUST00000154355.3 ENSMUST00000232870.2 ENSMUST00000233324.2 ENSMUST00000233931.2 |
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| CDS TCA 90 bp | GCTTCGAATCACAGTGTCCGTGGTGAGCAGACAGCTCTCAGGCAGTaGGATCATCACCTGGCCCTGCAACGACGCTTTGCTCATCAGCCC | + |
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Preference number: 5 (lower is better) Translates to: ASNHSVRGEQTALRQ*DHHLALQRRFAHQP Trigger: GGGCTGATGAGCAAAGCGTCGTTGCAGGGCCAGGTGATGATCTCACTGCCTGAGAGCTGTCTGCTCACCACGGACACTGTGATTCGAAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232870.2 |
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| CDS TCA 90 bp | GCTTCGAATCACAGTGTCCGTGGTGAGCAGACAGCTCTCAGGCAGTaGGATCATCACCTGGCCCTCCTGCAACGACGCTTTGCTCATCAG | + |
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Preference number: 5 (lower is better) Translates to: ASNHSVRGEQTALRQ*DHHLALLQRRFAHQ Trigger: CTGATGAGCAAAGCGTCGTTGCAGGAGGGCCAGGTGATGATCTCACTGCCTGAGAGCTGTCTGCTCACCACGGACACTGTGATTCGAAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023669.14 ENSMUST00000154355.3 ENSMUST00000233931.2 |
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| CDS TCA 90 bp | CTGGTTTTCTCGTTAAACGCCGCTTTTACCTGCACATGTGGGCTGTaGTTCAGCAGGTCCAGGAACGGAGCAAGCGCACACGTGTCCGGC | + |
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Preference number: 5 (lower is better) Translates to: LVFSLNAAFTCTCGL*FSRSRNGASAHVSG Trigger: GCCGGACACGTGTGCGCTTGCTCCGTTCCTGGACCTGCTGAATCACAGCCCACATGTGCAGGTAAAAGCGGCGTTTAACGAGAAAACCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023669.14 ENSMUST00000232870.2 ENSMUST00000233931.2 |
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| CDS GCA 90 bp | TCTCAGGCAGTGAGATCATCACCTGGCCCTCCTGCAACGACGCTTTaGTCATCAGCCCTCTTCCTGTTCCTGGAAAGCTGGCGGGTACTA | + |
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Preference number: 5 (lower is better) Translates to: SQAVRSSPGPPATTL*SSALFLFLESWRVL Trigger: TAGTACCCGCCAGCTTTCCAGGAACAGGAAGAGGGCTGATGAGCAAAGCGTCGTTGCAGGAGGGCCAGGTGATGATCTCACTGCCTGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023669.14 ENSMUST00000154355.3 ENSMUST00000233931.2 |
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| CDS GCA 90 bp | AGCTCTCAGGCAGTGAGATCATCACCTGGCCCTGCAACGACGCTTTaGTCATCAGCCCTCTTCCTGTTCCTGGAAAGCTGGCGGGTACTA | + |
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Preference number: 5 (lower is better) Translates to: SSQAVRSSPGPATTL*SSALFLFLESWRVL Trigger: TAGTACCCGCCAGCTTTCCAGGAACAGGAAGAGGGCTGATGAGCAAAGCGTCGTTGCAGGGCCAGGTGATGATCTCACTGCCTGAGAGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232870.2 |
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| CDS CCA 90 bp | GATCTACCACTTCCGGCTCCAAACACACCGGGCAGGTGTATGACTTaGGTAAGATGTCCAGGTAAGACTTCCAGAGGGACCGACAGCCGG | + |
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Preference number: 5 (lower is better) Translates to: DLPLPAPNTPGRCMT*VRCPGKTSRGTDSR Trigger: CCGGCTGTCGGTCCCTCTGGAAGTCTTACCTGGACATCTTACCCAAGTCATACACCTGCCCGGTGTGTTTGGAGCCGGAAGTGGTAGATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023669.14 ENSMUST00000154355.3 ENSMUST00000232870.2 ENSMUST00000233931.2 |
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| CDS CCA 90 bp | ATAGCACCTGGTTTTCTCGTTAAACGCCGCTTTTACCTGCACATGTaGGCTGTGATTCAGCAGGTCCAGGAACGGAGCAAGCGCACACGT | + |
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Preference number: 5 (lower is better) Translates to: IAPGFLVKRRFYLHM*AVIQQVQERSKRTR Trigger: ACGTGTGCGCTTGCTCCGTTCCTGGACCTGCTGAATCACAGCCCACATGTGCAGGTAAAAGCGGCGTTTAACGAGAAAACCAGGTGCTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023669.14 ENSMUST00000232870.2 ENSMUST00000233931.2 |
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| CDS GCA 72 bp | GTCCAGGAACGGAGCAAGCGCACACGTGTCCGGCTCTaGGGAAAGGCACTCCTGCCTCCTGGACCTCAGGTA | + |
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Preference number: 6 (lower is better) Translates to: VQERSKRTRVRL*GKALLPPGPQV Trigger: TACCTGAGGTCCAGGAGGCAGGAGTGCCTTTCCGCAGAGCCGGACACGTGTGCGCTTGCTCCGTTCCTGGAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000023669.14 ENSMUST00000154355.3 ENSMUST00000232870.2 ENSMUST00000233324.2 ENSMUST00000233931.2 |
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| CDS CAA 72 bp | TGGGGAATCCCTGTGTGGACAGCACCCGTCCTCCCCTaGCGCAGCACAGCGTGCGTCTCCTCGATGACGTCA | + |
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Preference number: 6 (lower is better) Translates to: WGIPVWTAPVLP*RSTACVSSMTS Trigger: TGACGTCATCGAGGAGACGCACGCTGTGCTGCGCAAGGGGAGGACGGGTGCTGTCCACACAGGGATTCCCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000232835.2 |
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| CDS CCA 72 bp | ACGTGTAGGGAATCACTGCTCTGGGGAATCCCTGTGTaGACAGCACCCGTCCTCCCCTTGCGCAGCACAGCG | + |
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Preference number: 6 (lower is better) Translates to: TCRESLLWGIPV*TAPVLPLRSTA Trigger: CGCTGTGCTGCGCAAGGGGAGGACGGGTGCTGTCCACACAGGGATTCCCCAGAGCAGTGATTCCCTACACGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000232835.2 |
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| CDS TCA 72 bp | TCCTCCCCTTGCGCAGCACAGCGTGCGTCTCCTCGATaGCGTCAGAGCATATTTTCTGGGCCACGCCCAAGC | + |
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Preference number: 6 (lower is better) Translates to: SSPCAAQRASPR*RQSIFSGPRPS Trigger: GCTTGGGCGTGGCCCAGAAAATATGCTCTGACGTCATCGAGGAGACGCACGCTGTGCTGCGCAAGGGGAGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000232835.2 |
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| CDS CAA 90 bp | TCACTGCTCTGGGGAATCCCTGTGTGGACAGCACCCGTCCTCCCCTaGCGCAGCACAGCGTGCGTCTCCTCGATGACGTCAGAGCATATT | + |
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Preference number: 6 (lower is better) Translates to: SLLWGIPVWTAPVLP*RSTACVSSMTSEHI Trigger: AATATGCTCTGACGTCATCGAGGAGACGCACGCTGTGCTGCGCAAGGGGAGGACGGGTGCTGTCCACACAGGGATTCCCCAGAGCAGTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000232835.2 |
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| CDS TCA 72 bp | TCACCGTGCACCAGGCCCACAGGAAGGCTCGGTAGCTaGAAACGCTGTCCACAGGCTCTGCAAACAGAGGCT | + |
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Preference number: 6 (lower is better) Translates to: SPCTRPTGRLGS*KRCPQALQTEA Trigger: AGCCTCTGTTTGCAGAGCCTGTGGACAGCGTTTTCAGCTACCGAGCCTTCCTGTGGGCCTGGTGCACGGTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000023669.14 ENSMUST00000154355.3 ENSMUST00000232870.2 ENSMUST00000233324.2 ENSMUST00000233931.2 |
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| CDS GCA 72 bp | TGGACAGCACCCGTCCTCCCCTTGCGCAGCACAGCGTaGGTCTCCTCGATGACGTCAGAGCATATTTTCTGG | + |
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Preference number: 6 (lower is better) Translates to: WTAPVLPLRSTA*VSSMTSEHIFW Trigger: CCAGAAAATATGCTCTGACGTCATCGAGGAGACGCACGCTGTGCTGCGCAAGGGGAGGACGGGTGCTGTCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000232835.2 |
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| CDS TCA 72 bp | CACAGTGTCCGTGGTGAGCAGACAGCTCTCAGGCAGTaGGATCATCACCTGGCCCTCCTGCAACGACGCTTT | + |
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Preference number: 6 (lower is better) Translates to: HSVRGEQTALRQ*DHHLALLQRRF Trigger: AAAGCGTCGTTGCAGGAGGGCCAGGTGATGATCTCACTGCCTGAGAGCTGTCTGCTCACCACGGACACTGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023669.14 ENSMUST00000154355.3 ENSMUST00000233931.2 |
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| CDS TCA 72 bp | CACAGTGTCCGTGGTGAGCAGACAGCTCTCAGGCAGTaGGATCATCACCTGGCCCTGCAACGACGCTTTGCT | + |
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Preference number: 6 (lower is better) Translates to: HSVRGEQTALRQ*DHHLALQRRFA Trigger: AGCAAAGCGTCGTTGCAGGGCCAGGTGATGATCTCACTGCCTGAGAGCTGTCTGCTCACCACGGACACTGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232870.2 |
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| CDS CCA 72 bp | GTGAGCAGACAGCTCTCAGGCAGTGAGATCATCACCTaGCCCTCCTGCAACGACGCTTTGCTCATCAGCCCT | + |
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Preference number: 6 (lower is better) Translates to: VSRQLSGSEIIT*PSCNDALLISP Trigger: AGGGCTGATGAGCAAAGCGTCGTTGCAGGAGGGCCAGGTGATGATCTCACTGCCTGAGAGCTGTCTGCTCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023669.14 ENSMUST00000154355.3 ENSMUST00000233931.2 |
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| CDS GCA 72 bp | GTGAGATCATCACCTGGCCCTCCTGCAACGACGCTTTaGTCATCAGCCCTCTTCCTGTTCCTGGAAAGCTGG | + |
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Preference number: 6 (lower is better) Translates to: VRSSPGPPATTL*SSALFLFLESW Trigger: CCAGCTTTCCAGGAACAGGAAGAGGGCTGATGAGCAAAGCGTCGTTGCAGGAGGGCCAGGTGATGATCTCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023669.14 ENSMUST00000154355.3 ENSMUST00000233931.2 |
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| CDS GCA 72 bp | CAGCTCTCAGGCAGTGAGATCATCACCTGGCCCTCCTaGAACGACGCTTTGCTCATCAGCCCTCTTCCTGTT | + |
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Preference number: 6 (lower is better) Translates to: QLSGSEIITWPS*NDALLISPLPV Trigger: AACAGGAAGAGGGCTGATGAGCAAAGCGTCGTTGCAGGAGGGCCAGGTGATGATCTCACTGCCTGAGAGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000023669.14 ENSMUST00000154355.3 ENSMUST00000233931.2 |
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| CDS GCA 72 bp | GTAGAGAAGAAGCCTCTAGCGGAGGTAAACAGGTCCTaGACTCGGGCTCTCTGCTCTTCCGCCTTCGCCTTT | + |
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Preference number: 6 (lower is better) Translates to: VEKKPLAEVNRS*TRALCSSAFAF Trigger: AAAGGCGAAGGCGGAAGAGCAGAGAGCCCGAGTGCAGGACCTGTTTACCTCCGCTAGAGGCTTCTTCTCTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023669.14 ENSMUST00000154355.3 ENSMUST00000232870.2 ENSMUST00000233931.2 |
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| CDS GCA 72 bp | GCAGTGAGATCATCACCTGGCCCTGCAACGACGCTTTaGTCATCAGCCCTCTTCCTGTTCCTGGAAAGCTGG | + |
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Preference number: 6 (lower is better) Translates to: AVRSSPGPATTL*SSALFLFLESW Trigger: CCAGCTTTCCAGGAACAGGAAGAGGGCTGATGAGCAAAGCGTCGTTGCAGGGCCAGGTGATGATCTCACTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232870.2 |
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| CDS TCA 72 bp | TCGTTAAACGCCGCTTTTACCTGCACATGTGGGCTGTaGTTCAGCAGGTCCAGGAACGGAGCAAGCGCACAC | + |
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Preference number: 6 (lower is better) Translates to: SLNAAFTCTCGL*FSRSRNGASAH Trigger: GTGTGCGCTTGCTCCGTTCCTGGACCTGCTGAATCACAGCCCACATGTGCAGGTAAAAGCGGCGTTTAACGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023669.14 ENSMUST00000232870.2 ENSMUST00000233931.2 |
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| CDS GCA 72 bp | AGACAGCTCTCAGGCAGTGAGATCATCACCTGGCCCTaGAACGACGCTTTGCTCATCAGCCCTCTTCCTGTT | + |
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Preference number: 6 (lower is better) Translates to: RQLSGSEIITWP*NDALLISPLPV Trigger: AACAGGAAGAGGGCTGATGAGCAAAGCGTCGTTGCAGGGCCAGGTGATGATCTCACTGCCTGAGAGCTGTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232870.2 |
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| CDS CCA 72 bp | CTTCCGGCTCCAAACACACCGGGCAGGTGTATGACTTaGGTAAGATGTCCAGGTAAGACTTCCAGAGGGACC | + |
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Preference number: 6 (lower is better) Translates to: LPAPNTPGRCMT*VRCPGKTSRGT Trigger: GGTCCCTCTGGAAGTCTTACCTGGACATCTTACCCAAGTCATACACCTGCCCGGTGTGTTTGGAGCCGGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023669.14 ENSMUST00000154355.3 ENSMUST00000232870.2 ENSMUST00000233931.2 |
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| CDS CCA 72 bp | GGGCTCTCTGCTCTTCCGCCTTCGCCTTTAAAGGGCTaGGAAGAAGATCTACCACTTCCGGCTCCAAACACA | + |
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Preference number: 6 (lower is better) Translates to: GLSALPPSPLKG*EEDLPLPAPNT Trigger: TGTGTTTGGAGCCGGAAGTGGTAGATCTTCTTCCCAGCCCTTTAAAGGCGAAGGCGGAAGAGCAGAGAGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000023669.14 ENSMUST00000154355.3 ENSMUST00000232870.2 ENSMUST00000233931.2 |
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| CDS GCA 72 bp | CTGAAAACGCTGTCCACAGGCTCTGCAAACAGAGGCTaGAGGGTAGAGAAGAAGCCTCTAGCGGAGGTAAAC | + |
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Preference number: 6 (lower is better) Translates to: LKTLSTGSANRG*RVEKKPLAEVN Trigger: GTTTACCTCCGCTAGAGGCTTCTTCTCTACCCTGCAGCCTCTGTTTGCAGAGCCTGTGGACAGCGTTTTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000023669.14 ENSMUST00000154355.3 ENSMUST00000232870.2 ENSMUST00000233931.2 |
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| CDS CCA 72 bp | GGTTTTCTCGTTAAACGCCGCTTTTACCTGCACATGTaGGCTGTGATTCAGCAGGTCCAGGAACGGAGCAAG | + |
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Preference number: 6 (lower is better) Translates to: GFLVKRRFYLHM*AVIQQVQERSK Trigger: CTTGCTCCGTTCCTGGACCTGCTGAATCACAGCCCACATGTGCAGGTAAAAGCGGCGTTTAACGAGAAAACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023669.14 ENSMUST00000232870.2 ENSMUST00000233931.2 |
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