RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SETD2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000044791

Ensembl transcript IDs: ENSMUST00000153838.8, ENSMUST00000196814.5, ENSMUST00000197399.2, ENSMUST00000197655.2, ENSMUST00000198823.2, ENSMUST00000200460.5

Found 647 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGAAACTTCCACAGAGGCTGCCACATGCGGCACCACTGGCACAGATaGGGGAGCAGCAAGGGATTCTGTAGAATGTCCTACCAAGGGCTG +
Preference number: 1 (lower is better)
Translates to: GNFHRGCHMRHHWHR*GSSKGFCRMSYQGL
Trigger: CAGCCCTTGGTAGGACATTCTACAGAATCCCTTGCTGCTCCCCCATCTGTGCCAGTGGTGCCGCATGTGGCAGCCTCTGTGGAAGTTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000196814.5
3UTR CCA 90 bp TGCAGCTTACAGCTGACACCTGCAGGTTTGAACTGCTCAGGATGGTaGGTCATCACATCAGTAGCACAGCCTTGGCCGTGGGGTAGGGCA +
Preference number: 1 (lower is better)
Translates to: CSLQLTPAGLNCSGW*VITSVAQPWPWGRA
Trigger: TGCCCTACCCCACGGCCAAGGCTGTGCTACTGATGTGATGACCCACCATCCTGAGCAGTTCAAACCTGCAGGTGTCAGCTGTAAGCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
ENSMUST00000197399.2
ENSMUST00000200460.5
3UTR CCA 90 bp TGCTCAGGATGGTGGGTCATCACATCAGTAGCACAGCCTTGGCCGTaGGGTAGGGCAGAAGCCACAGGATTCATCCTTTCCGCTCATACT +
Preference number: 1 (lower is better)
Translates to: CSGWWVITSVAQPWP*GRAEATGFILSAHT
Trigger: AGTATGAGCGGAAAGGATGAATCCTGTGGCTTCTGCCCTACCCCACGGCCAAGGCTGTGCTACTGATGTGATGACCCACCATCCTGAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
ENSMUST00000197399.2
ENSMUST00000200460.5
3UTR CCA 90 bp TTGAACTGCTCAGGATGGTGGGTCATCACATCAGTAGCACAGCCTTaGCCGTGGGGTAGGGCAGAAGCCACAGGATTCATCCTTTCCGCT +
Preference number: 1 (lower is better)
Translates to: LNCSGWWVITSVAQP*PWGRAEATGFILSA
Trigger: AGCGGAAAGGATGAATCCTGTGGCTTCTGCCCTACCCCACGGCCAAGGCTGTGCTACTGATGTGATGACCCACCATCCTGAGCAGTTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
ENSMUST00000197399.2
ENSMUST00000200460.5
3UTR CCA 90 bp CTGAGAACTGGAAACTTCCACAGAGGCTGCCACATGCGGCACCACTaGCACAGATGGGGGAGCAGCAAGGGATTCTGTAGAATGTCCTAC +
Preference number: 1 (lower is better)
Translates to: LRTGNFHRGCHMRHH*HRWGSSKGFCRMSY
Trigger: GTAGGACATTCTACAGAATCCCTTGCTGCTCCCCCATCTGTGCCAGTGGTGCCGCATGTGGCAGCCTCTGTGGAAGTTTCCAGTTCTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000196814.5
3UTR GCA 90 bp CTGACTTCAATAGTGGCTTCACTCTCAACTTTGGACTCGCACAGCTaGTGTGGGAGGAGCTGCTGGGACTGCAGCTCTTCATCCTCTTCC +
Preference number: 1 (lower is better)
Translates to: LTSIVASLSTLDSHS*CGRSCWDCSSSSSS
Trigger: GGAAGAGGATGAAGAGCTGCAGTCCCAGCAGCTCCTCCCACAGCAGCTGTGCGAGTCCAAAGTTGAGAGTGAAGCCACTATTGAAGTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000196814.5
3UTR CCA 90 bp TTTTGCAGCTTACAGCTGACACCTGCAGGTTTGAACTGCTCAGGATaGTGGGTCATCACATCAGTAGCACAGCCTTGGCCGTGGGGTAGG +
Preference number: 1 (lower is better)
Translates to: FCSLQLTPAGLNCSG*WVITSVAQPWPWGR
Trigger: CCTACCCCACGGCCAAGGCTGTGCTACTGATGTGATGACCCACCATCCTGAGCAGTTCAAACCTGCAGGTGTCAGCTGTAAGCTGCAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
ENSMUST00000197399.2
ENSMUST00000200460.5
3UTR CCA 90 bp TCACTCTCAACTTTGGACTCGCACAGCTGCTGTGGGAGGAGCTGCTaGGACTGCAGCTCTTCATCCTCTTCCACAGTGACAGTCTCTAAC +
Preference number: 1 (lower is better)
Translates to: SLSTLDSHSCCGRSC*DCSSSSSSTVTVSN
Trigger: GTTAGAGACTGTCACTGTGGAAGAGGATGAAGAGCTGCAGTCCCAGCAGCTCCTCCCACAGCAGCTGTGCGAGTCCAAAGTTGAGAGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000196814.5
3UTR TCA 90 bp CCGTCGCCAAGCTCTGCCATCCAGATCCACAACAGTGACAACCCATaGCGTTCCAGAAATGACTTGAGGCAGGACTGTGAGTGTGTGTTC +
Preference number: 1 (lower is better)
Translates to: PSPSSAIQIHNSDNP*RSRNDLRQDCECVF
Trigger: GAACACACACTCACAGTCCTGCCTCAAGTCATTTCTGGAACGTCATGGGTTGTCACTGTTGTGGATCTGGATGGCAGAGCTTGGCGACGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000196814.5
3UTR TCA 90 bp TCACGGCTGCAGTTGGCTGTACCACCACTCCTTGTGGGTGAGCTGTaGAAATCTGCTGTCCCTGGATATACTGAAGACTTGGCTGGGCAT +
Preference number: 1 (lower is better)
Translates to: SRLQLAVPPLLVGEL*KSAVPGYTEDLAGH
Trigger: ATGCCCAGCCAAGTCTTCAGTATATCCAGGGACAGCAGATTTTCACAGCTCACCCACAAGGAGTGGTGGTACAGCCAACTGCAGCCGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000196814.5
3UTR GCA 90 bp AGAGCTCACTTTTGCAGCTTACAGCTGACACCTGCAGGTTTGAACTaGTCAGGATGGTGGGTCATCACATCAGTAGCACAGCCTTGGCCG +
Preference number: 1 (lower is better)
Translates to: RAHFCSLQLTPAGLN*SGWWVITSVAQPWP
Trigger: CGGCCAAGGCTGTGCTACTGATGTGATGACCCACCATCCTGAGCAGTTCAAACCTGCAGGTGTCAGCTGTAAGCTGCAAAAGTGAGCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
ENSMUST00000197399.2
ENSMUST00000200460.5
3UTR CCA 90 bp AGCATTAGGGTTGCTGGGATCCACATAGGCTTGCATGGGGTAACCTaGTGGGTACCCAGCAAAGGGGTGATGAGAGGCATTATATCCCAG +
Preference number: 1 (lower is better)
Translates to: SIRVAGIHIGLHGVT*WVPSKGVMRGIISQ
Trigger: CTGGGATATAATGCCTCTCATCACCCCTTTGCTGGGTACCCACCAGGTTACCCCATGCAAGCCTATGTGGATCCCAGCAACCCTAATGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000196814.5
ENSMUST00000197655.2
3UTR TCA 90 bp TCCGTGCTCGGCTTGGCAGAAGGGTCCGGTGTATTAAGCGGTGTGTaGGCACGTGATGTATTCTCACTAGAATACCCGTCTCCTTCACTT +
Preference number: 1 (lower is better)
Translates to: SVLGLAEGSGVLSGV*ARDVFSLEYPSPSL
Trigger: AAGTGAAGGAGACGGGTATTCTAGTGAGAATACATCACGTGCTCACACACCGCTTAATACACCGGACCCTTCTGCCAAGCCGAGCACGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000196814.5
3UTR CCA 90 bp ATTAGGGTTGCTGGGATCCACATAGGCTTGCATGGGGTAACCTGGTaGGTACCCAGCAAAGGGGTGATGAGAGGCATTATATCCCAGAGA +
Preference number: 1 (lower is better)
Translates to: IRVAGIHIGLHGVTW*VPSKGVMRGIISQR
Trigger: TCTCTGGGATATAATGCCTCTCATCACCCCTTTGCTGGGTACCCACCAGGTTACCCCATGCAAGCCTATGTGGATCCCAGCAACCCTAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000196814.5
ENSMUST00000197655.2
3UTR CCA 90 bp TCCCAGGTCCATTTCAGCTTCATGCTCAAGGCTGGCATCATCTCCTaGGCTTTCCCAAGTAGGAGGATCCCACTGAGTCTGTCTTGTGAT +
Preference number: 1 (lower is better)
Translates to: SQVHFSFMLKAGIIS*AFPSRRIPLSLSCD
Trigger: ATCACAAGACAGACTCAGTGGGATCCTCCTACTTGGGAAAGCCCAGGAGATGATGCCAGCCTTGAGCATGAAGCTGAAATGGACCTGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000196814.5
3UTR CCA 90 bp ATGGCCTGTAACTGTTACACCAACAGCTCACAACTAGGGGTCATTTaGAGACAGAGCTCACTTTTGCAGCTTACAGCTGACACCTGCAGG +
Preference number: 1 (lower is better)
Translates to: MACNCYTNSSQLGVI*RQSSLLQLTADTCR
Trigger: CCTGCAGGTGTCAGCTGTAAGCTGCAAAAGTGAGCTCTGTCTCCAAATGACCCCTAGTTGTGAGCTGTTGGTGTAACAGTTACAGGCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
ENSMUST00000200460.5
3UTR CCA 90 bp AGTCTTGGTGTACAACACTTTCATTCTGAGCTACATACTGAGAACTaGAAACTTCCACAGAGGCTGCCACATGCGGCACCACTGGCACAG +
Preference number: 1 (lower is better)
Translates to: SLGVQHFHSELHTEN*KLPQRLPHAAPLAQ
Trigger: CTGTGCCAGTGGTGCCGCATGTGGCAGCCTCTGTGGAAGTTTCCAGTTCTCAGTATGTAGCTCAGAATGAAAGTGTTGTACACCAAGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000196814.5
3UTR TCA 90 bp TCCTCGGGGTTCTTACAGTACTTCAGCTCCTTATTCATAACTCCATaGGTCAGCTTTCGGGCGAGGTGCTTGAAATCTTCAGTGGTGGTG +
Preference number: 1 (lower is better)
Translates to: SSGFLQYFSSLFITP*VSFRARCLKSSVVV
Trigger: CACCACCACTGAAGATTTCAAGCACCTCGCCCGAAAGCTGACTCATGGAGTTATGAATAAGGAGCTGAAGTACTGTAAGAACCCCGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000196814.5
ENSMUST00000197399.2
3UTR TCA 90 bp TTGTGCAGGAGAATACTGCTGTTGTACACTGACAGACTGTTGGTTTaGCTCCCAGACATTGTAATTCTGTCCTTGGACTGGGCCTGGAGC +
Preference number: 1 (lower is better)
Translates to: LCRRILLLYTDRLLV*LPDIVILSLDWAWS
Trigger: GCTCCAGGCCCAGTCCAAGGACAGAATTACAATGTCTGGGAGTCAAACCAACAGTCTGTCAGTGTACAACAGCAGTATTCTCCTGCACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000196814.5
3UTR CCA 90 bp GTCCTTGGACTGGGCCTGGAGCTTGTACTGGCATTACAGGAACATTaGAGTCTTGGTGTACAACACTTTCATTCTGAGCTACATACTGAG +
Preference number: 1 (lower is better)
Translates to: VLGLGLELVLALQEH*SLGVQHFHSELHTE
Trigger: CTCAGTATGTAGCTCAGAATGAAAGTGTTGTACACCAAGACTCCAATGTTCCTGTAATGCCAGTACAAGCTCCAGGCCCAGTCCAAGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000196814.5
3UTR TCA 90 bp ACGCTAGGGTCTTGTTTTTCTTCAGCACGAAGTTGGAAATGGAGTTaGGAAAAGGAGACACATGGTCAGCTGGTGATGTTAACAAGCTCC +
Preference number: 1 (lower is better)
Translates to: TLGSCFSSARSWKWS*EKETHGQLVMLTSS
Trigger: GGAGCTTGTTAACATCACCAGCTGACCATGTGTCTCCTTTTCTCAACTCCATTTCCAACTTCGTGCTGAAGAAAAACAAGACCCTAGCGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000196814.5
3UTR CCA 90 bp CCAGACATTGTAATTCTGTCCTTGGACTGGGCCTGGAGCTTGTACTaGCATTACAGGAACATTGGAGTCTTGGTGTACAACACTTTCATT +
Preference number: 1 (lower is better)
Translates to: PDIVILSLDWAWSLY*HYRNIGVLVYNTFI
Trigger: AATGAAAGTGTTGTACACCAAGACTCCAATGTTCCTGTAATGCCAGTACAAGCTCCAGGCCCAGTCCAAGGACAGAATTACAATGTCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000196814.5
3UTR CCA 90 bp TGGCTTCTCTCACTTTCAACATCAGACACTCCCTCTTCTTCATCTTaGGATGGTGTTTCCTCAGCAATAGTTTCTTCTAGTTTTGTGCCA +
Preference number: 1 (lower is better)
Translates to: WLLSLSTSDTPSSSS*DGVSSAIVSSSFVP
Trigger: TGGCACAAAACTAGAAGAAACTATTGCTGAGGAAACACCATCCCAAGATGAAGAAGAGGGAGTGTCTGATGTTGAAAGTGAGAGAAGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000196814.5
3UTR CCA 90 bp TTGGTAGCCAAATCACTTATATCCACTGTTTTATCTGGTGGCTCCTaGCTTCTCTCACTTTCAACATCAGACACTCCCTCTTCTTCATCT +
Preference number: 1 (lower is better)
Translates to: LVAKSLISTVLSGGS*LLSLSTSDTPSSSS
Trigger: AGATGAAGAAGAGGGAGTGTCTGATGTTGAAAGTGAGAGAAGCCAGGAGCCACCAGATAAAACAGTGGATATAAGTGATTTGGCTACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000196814.5
3UTR CCA 90 bp TCCAAAGTTTCAATTCTAACCATGAGCCGGGATAAACTAAGAACCTaGTTCTTATCAGAGAGGCCTTCACCATTTTCCATCAGTGCTTCA +
Preference number: 1 (lower is better)
Translates to: SKVSILTMSRDKLRT*FLSERPSPFSISAS
Trigger: TGAAGCACTGATGGAAAATGGTGAAGGCCTCTCTGATAAGAACCAGGTTCTTAGTTTATCCCGGCTCATGGTTAGAATTGAAACTTTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000196814.5
3UTR TCA 90 bp ATATGGTTGTTTGAGATTGTGCAGGAGAATACTGCTGTTGTACACTaGCAGACTGTTGGTTTGACTCCCAGACATTGTAATTCTGTCCTT +
Preference number: 1 (lower is better)
Translates to: IWLFEIVQENTAVVH*QTVGLTPRHCNSVL
Trigger: AAGGACAGAATTACAATGTCTGGGAGTCAAACCAACAGTCTGTCAGTGTACAACAGCAGTATTCTCCTGCACAATCTCAAACAACCATAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000196814.5
3UTR-3UTR GCA 90 bp AGGGTAAAGGATCTGGGGGAGGTGCGCATGGGTCTGTGCGCTGACAGCACCGCCCCTGCAGGTTTGAACTaGTCAGGATGGTGGGTCATC +
Preference number: 2 (lower is better)
Translates to: RVKDLGEVRMGLCADSTAPAGLN*SGWWVI
Trigger: GATGACCCACCATCCTGAGCAGTTCAAACCTGCAGG...GGCGGTGCTGTCAGCGCACAGACCCATGCGCACCTCCCCCAGATCCTTTACCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
ENSMUST00000200460.5
3UTR-3UTR TCA 90 bp CCGTGGGGTAGGGCAGAAGCCACAGGATTCATCCTTTCCGCTCATACTCCACTCGGGGAGACCCAGATTTaGGAATGGGGTCGTGTGGCC +
Preference number: 2 (lower is better)
Translates to: PWGRAEATGFILSAHTPLGETQI*EWGRVA
Trigger: GGCCACACGACCCCATTCTCAAATCTGGGTCTCCCC...GAGTGGAGTATGAGCGGAAAGGATGAATCCTGTGGCTTCTGCCCTACCCCACGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
ENSMUST00000200460.5
3UTR-3UTR TCA 90 bp CTGGCCTTTTTGTTCCCCGCTCATATGCAGAAGAGGGTGGTGACAGAGAGCCCCGCCCCGGCAGTTGGCTaGCCCACAGAAACACTTCTG +
Preference number: 2 (lower is better)
Translates to: LAFLFPAHMQKRVVTESPAPAVG*PTETLL
Trigger: CAGAAGTGTTTCTGTGGGTCAGCCAACTGCCGGGGC...GGGGCTCTCTGTCACCACCCTCTTCTGCATATGAGCGGGGAACAAAAAGGCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000196814.5
3UTR-3UTR GCA 90 bp CGTGTGGCCAAGGTCTTCCCTAGGCTACTGCCTCTGATGGCCTGTAACTGTTACAGGATCTGGGGGAGGTaGGCATGGGTCTGTGCGCTG +
Preference number: 2 (lower is better)
Translates to: RVAKVFPRLLPLMACNCYRIWGR*AWVCAL
Trigger: CAGCGCACAGACCCATGCGCACCTCCCCCAGATCCT...GTAACAGTTACAGGCCATCAGAGGCAGTAGCCTAGGGAAGACCTTGGCCACACG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
ENSMUST00000200460.5
3UTR-3UTR TCA 90 bp CATGCTAGGTGTGGGCAGAAGCACCTTTCCAGCATTAGGGTTGCTGGGATCCACGGGGAGACCCAGATTTaGGAATGGGGTCGTGTGGCC +
Preference number: 2 (lower is better)
Translates to: HARCGQKHLSSIRVAGIHGETQI*EWGRVA
Trigger: GGCCACACGACCCCATTCTCAAATCTGGGTCTCCCC...GTGGATCCCAGCAACCCTAATGCTGGAAAGGTGCTTCTGCCCACACCTAGCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000196814.5
3UTR-3UTR GCA 90 bp CAGCTGACACCTGCAGGTTTGAACTGCTCAGGATGGTGGGTCATCACATCAGTAAGGATCTGGGGGAGGTaGGCATGGGTCTGTGCGCTG +
Preference number: 2 (lower is better)
Translates to: QLTPAGLNCSGWWVITSVRIWGR*AWVCAL
Trigger: CAGCGCACAGACCCATGCGCACCTCCCCCAGATCCT...TACTGATGTGATGACCCACCATCCTGAGCAGTTCAAACCTGCAGGTGTCAGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
ENSMUST00000200460.5
3UTR-3UTR CCA 90 bp AGCTTACAGCTGACACCTGCAGGTTTGAACTGCTCAGGATGGTGGGTCATCACATGGGGGAGGTGCGCATaGGTCTGTGCGCTGACAGCA +
Preference number: 2 (lower is better)
Translates to: SLQLTPAGLNCSGWWVITWGRCA*VCALTA
Trigger: TGCTGTCAGCGCACAGACCCATGCGCACCTCCCCCA...TGTGATGACCCACCATCCTGAGCAGTTCAAACCTGCAGGTGTCAGCTGTAAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
ENSMUST00000200460.5
3UTR CAA 90 bp CCATTTCAGGTGGCTGTAAGGACTGAGGCTGCCCTGGTGCAACTATaGAAGTCACGGCTGCAGTTGGCTGTACCACCACTCCTTGTGGGT +
Preference number: 2 (lower is better)
Translates to: PFQVAVRTEAALVQL*KSRLQLAVPPLLVG
Trigger: ACCCACAAGGAGTGGTGGTACAGCCAACTGCAGCCGTGACTTCAATAGTTGCACCAGGGCAGCCTCAGTCCTTACAGCCACCTGAAATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000196814.5
3UTR-3UTR GCA 90 bp GGTGATCCTGCCCACCTTGCAGTCAGGTTTCCGGTAAGGATTCAGGCACTGGACCCTGCAGGTTTGAACTaGTCAGGATGGTGGGTCATC +
Preference number: 2 (lower is better)
Translates to: GDPAHLAVRFPVRIQALDPAGLN*SGWWVI
Trigger: GATGACCCACCATCCTGAGCAGTTCAAACCTGCAGG...GTCCAGTGCCTGAATCCTTACCGGAAACCTGACTGCAAGGTGGGCAGGATCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000196814.5
ENSMUST00000197399.2
3UTR-3UTR GCA 90 bp TTACAGCTGACACCTGCAGGTTTGAACTGCTCAGGATGGTGGGTCATCACATCAGTGCGCATGGGTCTGTaGGCTGACAGCACCGCCAAG +
Preference number: 2 (lower is better)
Translates to: LQLTPAGLNCSGWWVITSVRMGL*ADSTAK
Trigger: CTTGGCGGTGCTGTCAGCGCACAGACCCATGCGCAC...TGATGTGATGACCCACCATCCTGAGCAGTTCAAACCTGCAGGTGTCAGCTGTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
ENSMUST00000200460.5
3UTR CAA 90 bp CAGAAGCACCTTTCCAGCATTAGGGTTGCTGGGATCCACATAGGCTaGCATGGGGTAACCTGGTGGGTACCCAGCAAAGGGGTGATGAGA +
Preference number: 2 (lower is better)
Translates to: QKHLSSIRVAGIHIG*HGVTWWVPSKGVMR
Trigger: TCTCATCACCCCTTTGCTGGGTACCCACCAGGTTACCCCATGCAAGCCTATGTGGATCCCAGCAACCCTAATGCTGGAAAGGTGCTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000196814.5
ENSMUST00000197655.2
3UTR-3UTR TCA 90 bp GGCTTGCATGGGGTAACCTGGTGGGTACCCAGCAAAGGGGTGATGAGAGGCATTGTCTTTGGAGCTGTTTaGTCTCTGAAGGCAGCAGCA +
Preference number: 2 (lower is better)
Translates to: GLHGVTWWVPSKGVMRGIVFGAV*SLKAAA
Trigger: TGCTGCTGCCTTCAGAGATCAAACAGCTCCAAAGAC...AATGCCTCTCATCACCCCTTTGCTGGGTACCCACCAGGTTACCCCATGCAAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000196814.5
ENSMUST00000197655.2
3UTR-3UTR CCA 90 bp TCATCTGGCCTTTTTGTTCCCCGCTCATATGCAGAAGAGGGTGGTGACAGAGAGTCAGTAGCACAGCCTTaGCCGTGGGGTAGGGCAGAA +
Preference number: 2 (lower is better)
Translates to: SSGLFVPRSYAEEGGDRESVAQP*PWGRAE
Trigger: TTCTGCCCTACCCCACGGCCAAGGCTGTGCTACTGA...CTCTCTGTCACCACCCTCTTCTGCATATGAGCGGGGAACAAAAAGGCCAGATGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000196814.5
3UTR-3UTR TCA 90 bp GTTTCTTCTAGTTTTGTGCCATTGCTGTCTTTGGGCTCTGTCTCCGTGTCTGCCTGCAGAAGAGGGTGGTaGCAGAGAGCCCCGTCGTTT +
Preference number: 2 (lower is better)
Translates to: VSSSFVPLLSLGSVSVSACRRGW*QRAPSF
Trigger: AAACGACGGGGCTCTCTGTCACCACCCTCTTCTGCA...GGCAGACACGGAGACAGAGCCCAAAGACAGCAATGGCACAAAACTAGAAGAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000196814.5
3UTR-3UTR GCA 90 bp GGGCAGAAGCCACAGGATTCATCCTTTCCGCTCATACTCCACTCTGGCCTGAGGGACAGAGCTCACTTTTaGAGCTTACAGCTGACACCT +
Preference number: 2 (lower is better)
Translates to: GQKPQDSSFPLILHSGLRDRAHF*SLQLTP
Trigger: AGGTGTCAGCTGTAAGCTGCAAAAGTGAGCTCTGTC...CCTCAGGCCAGAGTGGAGTATGAGCGGAAAGGATGAATCCTGTGGCTTCTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
ENSMUST00000197399.2
ENSMUST00000200460.5
3UTR-3UTR GCA 90 bp GGGGTAGGGCAGAAGCCACAGGATTCATCCTTTCCGCTCATACTCCACTCTGGCGACAGAGCTCACTTTTaGAGCTTACAGCTGACACCT +
Preference number: 2 (lower is better)
Translates to: GVGQKPQDSSFPLILHSGDRAHF*SLQLTP
Trigger: AGGTGTCAGCTGTAAGCTGCAAAAGTGAGCTCTGTC...GCCAGAGTGGAGTATGAGCGGAAAGGATGAATCCTGTGGCTTCTGCCCTACCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
ENSMUST00000197399.2
ENSMUST00000200460.5
3UTR-3UTR CCA 90 bp GAAGACTTGGCTGGGCATAACTCTGCACAATTGGAGGAGTTGTCTGTGAATAAGTGGGGGAGGTGCGCATaGGTCTGTGCGCTGACAGCA +
Preference number: 2 (lower is better)
Translates to: EDLAGHNSAQLEELSVNKWGRCA*VCALTA
Trigger: TGCTGTCAGCGCACAGACCCATGCGCACCTCCCCCA...CTTATTCACAGACAACTCCTCCAATTGTGCAGAGTTATGCCCAGCCAAGTCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000196814.5
3UTR CAA 90 bp GGAGACAGAGCTCACTTTTGCAGCTTACAGCTGACACCTGCAGGTTaGAACTGCTCAGGATGGTGGGTCATCACATCAGTAGCACAGCCT +
Preference number: 2 (lower is better)
Translates to: GDRAHFCSLQLTPAG*NCSGWWVITSVAQP
Trigger: AGGCTGTGCTACTGATGTGATGACCCACCATCCTGAGCAGTTCAAACCTGCAGGTGTCAGCTGTAAGCTGCAAAAGTGAGCTCTGTCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
ENSMUST00000197399.2
ENSMUST00000200460.5
3UTR-3UTR TCA 90 bp TTCAGTGGTGGTGATCCTGCCCACCTTGCAGTCAGGTTTCCGGTAAGGATTCAGAGCTCCTTGCTGCCCTaGGAAGCTTTAGATCTTTCC +
Preference number: 2 (lower is better)
Translates to: FSGGDPAHLAVRFPVRIQSSLLP*EALDLS
Trigger: GGAAAGATCTAAAGCTTCTCAGGGCAGCAAGGAGCT...CTGAATCCTTACCGGAAACCTGACTGCAAGGTGGGCAGGATCACCACCACTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000196814.5
3UTR-3UTR GCA 90 bp CACATGCGGCACCACTGGCACAGATGGGGGAGCAGCAAGGGATTCTGTAGAATGTTCTTTGCTTTTCTTTaGCAGCTCACTGGAGGTGTC +
Preference number: 2 (lower is better)
Translates to: HMRHHWHRWGSSKGFCRMFFAFL*QLTGGV
Trigger: GACACCTCCAGTGAGCTGGCAAAGAAAAGCAAAGAA...CATTCTACAGAATCCCTTGCTGCTCCCCCATCTGTGCCAGTGGTGCCGCATGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000196814.5
3UTR-3UTR GCA 90 bp TGGGATCCACATAGGCTTGCATGGGGTAACCTGGTGGGTACCCAGCAAAGGGGTCTAGTTTTGTGCCATTaGTGTCTTTGGGCTCTGTCT +
Preference number: 2 (lower is better)
Translates to: WDPHRLAWGNLVGTQQRGLVLCH*CLWALS
Trigger: AGACAGAGCCCAAAGACAGCAATGGCACAAAACTAG...ACCCCTTTGCTGGGTACCCACCAGGTTACCCCATGCAAGCCTATGTGGATCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000196814.5
3UTR-3UTR CCA 90 bp GGGGTAGGGCAGAAGCCACAGGATTCATCCTTTCCGCTCATACTCCACTCTGGCCAACTAGGGGTCATTTaGAGACAGAGCTCACTTTTG +
Preference number: 2 (lower is better)
Translates to: GVGQKPQDSSFPLILHSGQLGVI*RQSSLL
Trigger: CAAAAGTGAGCTCTGTCTCCAAATGACCCCTAGTTG...GCCAGAGTGGAGTATGAGCGGAAAGGATGAATCCTGTGGCTTCTGCCCTACCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
ENSMUST00000200460.5
3UTR-3UTR TCA 90 bp GGCAGCCTGCGTTGGGATATTTACATGATAACAAATCCAACCTTGCAGGAGAATGGGGAGACCCAGATTTaGGAATGGGGTCGTGTGGCC +
Preference number: 2 (lower is better)
Translates to: GSLRWDIYMITNPTLQENGETQI*EWGRVA
Trigger: GGCCACACGACCCCATTCTCAAATCTGGGTCTCCCC...ATTCTCCTGCAAGGTTGGATTTGTTATCATGTAAATATCCCAACGCAGGCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
ENSMUST00000200460.5
3UTR-3UTR TCA 90 bp TCTTGTTCAAACAACTTCCTGCGCTCCTCTGTAGAAAGTTTGTTTCGGTCTTTACATGGGTCTGTGCGCTaGCAGCACCGCCAAGGGGGA +
Preference number: 2 (lower is better)
Translates to: SCSNNFLRSSVESLFRSLHGSVR*QHRQGG
Trigger: TCCCCCTTGGCGGTGCTGTCAGCGCACAGACCCATG...TAAAGACCGAAACAAACTTTCTACAGAGGAGCGCAGGAAGTTGTTTGAACAAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000196814.5
3UTR-3UTR TCA 90 bp CGTGTGGCCAAGGTCTTCCCTAGGCTACTGCCTCTGATGGCCTGTAACTGTTACTCAGTCTGCGGAATATaGGTTTCTTGGGAGTATCTG +
Preference number: 2 (lower is better)
Translates to: RVAKVFPRLLPLMACNCYSVCGI*VSWEYL
Trigger: CAGATACTCCCAAGAAACTCATATTCCGCAGACTGA...GTAACAGTTACAGGCCATCAGAGGCAGTAGCCTAGGGAAGACCTTGGCCACACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000196814.5
3UTR-3UTR CCA 90 bp CATGCTAGGTGTGGGCAGAAGCACCTTTCCAGCATTAGGGTTGCTGGGATCCACATCATATCTGTCATCTaGCCTTTTTGTTCCCCGCTC +
Preference number: 2 (lower is better)
Translates to: HARCGQKHLSSIRVAGIHIISVI*PFCSPL
Trigger: GAGCGGGGAACAAAAAGGCCAGATGACAGATATGAT...GTGGATCCCAGCAACCCTAATGCTGGAAAGGTGCTTCTGCCCACACCTAGCATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000196814.5
ENSMUST00000197655.2
3UTR CAA 90 bp ACCAACAGCTCACAACTAGGGGTCATTTGGAGACAGAGCTCACTTTaGCAGCTTACAGCTGACACCTGCAGGTTTGAACTGCTCAGGATG +
Preference number: 2 (lower is better)
Translates to: TNSSQLGVIWRQSSL*QLTADTCRFELLRM
Trigger: CATCCTGAGCAGTTCAAACCTGCAGGTGTCAGCTGTAAGCTGCAAAAGTGAGCTCTGTCTCCAAATGACCCCTAGTTGTGAGCTGTTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
ENSMUST00000200460.5
3UTR-3UTR TCA 90 bp GCTCTGCCATCCAGATCCACAACAGTGACAACCCATGACGTTCCAGAAATGACTGAGCTGTTTGATCTCTaGAGGCAGCAGCATCTCTTC +
Preference number: 2 (lower is better)
Translates to: ALPSRSTTVTTHDVPEMTELFDL*RQQHLF
Trigger: GAAGAGATGCTGCTGCCTTCAGAGATCAAACAGCTC...AGTCATTTCTGGAACGTCATGGGTTGTCACTGTTGTGGATCTGGATGGCAGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000196814.5
3UTR-3UTR TCA 90 bp GGTGATCCTGCCCACCTTGCAGTCAGGTTTCCGGTAAGGATTCAGGCACTGGACATGTCACATGATGGATaGTGGAAGAGAGTACAAGAT +
Preference number: 2 (lower is better)
Translates to: GDPAHLAVRFPVRIQALDMSHDG*WKRVQD
Trigger: ATCTTGTACTCTCTTCCATCATCCATCATGTGACAT...GTCCAGTGCCTGAATCCTTACCGGAAACCTGACTGCAAGGTGGGCAGGATCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000197399.2
3UTR-3UTR TCA 90 bp TGGGATCCACATAGGCTTGCATGGGGTAACCTGGTGGGTACCCAGCAAAGGGGTTTTGGTTCACAGCTATaGTTCATGAAACGAGAGCAA +
Preference number: 2 (lower is better)
Translates to: WDPHRLAWGNLVGTQQRGFGSQL*FMKREQ
Trigger: TTGCTCTCGTTTCATGAATCATAGCTGTGAACCAAA...ACCCCTTTGCTGGGTACCCACCAGGTTACCCCATGCAAGCCTATGTGGATCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000196814.5
3UTR-3UTR TCA 90 bp CATGCTAGGTGTGGGCAGAAGCACCTTTCCAGCATTAGGGTTGCTGGGATCCACCCACAGAAACACTTCTaGGCTTCTTTGCCATATCTT +
Preference number: 2 (lower is better)
Translates to: HARCGQKHLSSIRVAGIHPQKHF*ASLPYL
Trigger: AAGATATGGCAAAGAAGCTCAGAAGTGTTTCTGTGG...GTGGATCCCAGCAACCCTAATGCTGGAAAGGTGCTTCTGCCCACACCTAGCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000196814.5
3UTR-3UTR TCA 90 bp AGCTCACTTTTGCAGCTTACAGCTGACACCTGCAGGTTTGAACTGCTCAGGATGGTTCCAGAAATGACTTaGGGCAGGACTGTGAGTGTG +
Preference number: 2 (lower is better)
Translates to: SSLLQLTADTCRFELLRMVPEMT*GRTVSV
Trigger: CACACTCACAGTCCTGCCTCAAGTCATTTCTGGAAC...CATCCTGAGCAGTTCAAACCTGCAGGTGTCAGCTGTAAGCTGCAAAAGTGAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000196814.5
3UTR-3UTR TCA 90 bp TTCAGTGGTGGTGATCCTGCCCACCTTGCAGTCAGGTTTCCGGTAAGGATTCAGCGGTGTGTGAGCACGTaGTGTATTCTCACTAGAATA +
Preference number: 2 (lower is better)
Translates to: FSGGDPAHLAVRFPVRIQRCVST*CILTRI
Trigger: TATTCTAGTGAGAATACATCACGTGCTCACACACCG...CTGAATCCTTACCGGAAACCTGACTGCAAGGTGGGCAGGATCACCACCACTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000196814.5
3UTR-3UTR GCA 90 bp AGCTCACTTTTGCAGCTTACAGCTGACACCTGCAGGTTTGAACTGCTCAGGATGCTTACAGCTGACACCTaGAGGTTTGAACTGCTCAGG +
Preference number: 2 (lower is better)
Translates to: SSLLQLTADTCRFELLRMLTADT*RFELLR
Trigger: CCTGAGCAGTTCAAACCTGCAGGTGTCAGCTGTAAG...CATCCTGAGCAGTTCAAACCTGCAGGTGTCAGCTGTAAGCTGCAAAAGTGAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
ENSMUST00000197399.2
ENSMUST00000200460.5
3UTR-3UTR CCA 90 bp CTCGGGGTTCTTACAGTACTTCAGCTCCTTATTCATAACTCCATGAGTCAGCTTTCAGTAGCACAGCCTTaGCCGTGGGGTAGGGCAGAA +
Preference number: 2 (lower is better)
Translates to: LGVLTVLQLLIHNSMSQLSVAQP*PWGRAE
Trigger: TTCTGCCCTACCCCACGGCCAAGGCTGTGCTACTGA...AAGCTGACTCATGGAGTTATGAATAAGGAGCTGAAGTACTGTAAGAACCCCGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000196814.5
ENSMUST00000197399.2
3UTR-3UTR CCA 90 bp CCTTGGACTGGGCCTGGAGCTTGTACTGGCATTACAGGAACATTGGAGTCTTGGATCATATCTGTCATCTaGCCTTTTTGTTCCCCGCTC +
Preference number: 2 (lower is better)
Translates to: PWTGPGACTGITGTLESWIISVI*PFCSPL
Trigger: GAGCGGGGAACAAAAAGGCCAGATGACAGATATGAT...CCAAGACTCCAATGTTCCTGTAATGCCAGTACAAGCTCCAGGCCCAGTCCAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000196814.5
3UTR CAA 90 bp CTGCATCTGTTGCTGTTGCTTCTGAGCTTCCCTCTGTGCCACCTCTaGTTCAAACAACTTCCTGCGCTCCTCTGTAGAAAGTTTGTTTCG +
Preference number: 2 (lower is better)
Translates to: LHLLLLLLSFPLCHL*FKQLPALLCRKFVS
Trigger: CGAAACAAACTTTCTACAGAGGAGCGCAGGAAGTTGTTTGAACAAGAGGTGGCACAGAGGGAAGCTCAGAAGCAACAGCAACAGATGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000196814.5
ENSMUST00000197655.2
3UTR-3UTR TCA 90 bp CGTGTGGCCAAGGTCTTCCCTAGGCTACTGCCTCTGATGGCCTGTAACTGTTACCACTGGACAATGAACTaGGACATCTCTTTTCTGAAT +
Preference number: 2 (lower is better)
Translates to: RVAKVFPRLLPLMACNCYHWTMN*DISFLN
Trigger: ATTCAGAAAAGAGATGTCTCAGTTCATTGTCCAGTG...GTAACAGTTACAGGCCATCAGAGGCAGTAGCCTAGGGAAGACCTTGGCCACACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000196814.5
3UTR-3UTR GCA 90 bp TTTCACATTCTCATTGCACTCCAGGTCCTCGGGGTTCTTACAGTACTTCAGCTCCTTACAGCTGACACCTaGAGGTTTGAACTGCTCAGG +
Preference number: 2 (lower is better)
Translates to: FHILIALQVLGVLTVLQLLTADT*RFELLR
Trigger: CCTGAGCAGTTCAAACCTGCAGGTGTCAGCTGTAAG...GAGCTGAAGTACTGTAAGAACCCCGAGGACCTGGAGTGCAATGAGAATGTGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000196814.5
ENSMUST00000197399.2
3UTR-3UTR GCA 90 bp GCTCTGCCATCCAGATCCACAACAGTGACAACCCATGACGTTCCAGAAATGACTGACAGAGCTCACTTTTaGAGCTTACAGCTGACACCT +
Preference number: 2 (lower is better)
Translates to: ALPSRSTTVTTHDVPEMTDRAHF*SLQLTP
Trigger: AGGTGTCAGCTGTAAGCTGCAAAAGTGAGCTCTGTC...AGTCATTTCTGGAACGTCATGGGTTGTCACTGTTGTGGATCTGGATGGCAGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000196814.5
3UTR-3UTR GCA 90 bp TCATCTGGCCTTTTTGTTCCCCGCTCATATGCAGAAGAGGGTGGTGACAGAGAGCTCGTTCAGCTACTGTaGTCTCCTTTTCAGTTTGAC +
Preference number: 2 (lower is better)
Translates to: SSGLFVPRSYAEEGGDRELVQLL*SPFQFD
Trigger: GTCAAACTGAAAAGGAGAGCACAGTAGCTGAACGAG...CTCTCTGTCACCACCCTCTTCTGCATATGAGCGGGGAACAAAAAGGCCAGATGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000196814.5
ENSMUST00000197655.2
3UTR-3UTR GCA 90 bp GGTTTTGTGTTTCACATTCTCATTGCACTCCAGGTCCTCGGGGTTCTTACAGTACTCACTGGAGGTGTCTaGTTCTGCTGTCTTGGGCTT +
Preference number: 2 (lower is better)
Translates to: GFVFHILIALQVLGVLTVLTGGV*FCCLGL
Trigger: AAGCCCAAGACAGCAGAAGCAGACACCTCCAGTGAG...TACTGTAAGAACCCCGAGGACCTGGAGTGCAATGAGAATGTGAAACACAAAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000196814.5
ENSMUST00000197399.2
3UTR-3UTR GCA 90 bp TCATCTGGCCTTTTTGTTCCCCGCTCATATGCAGAAGAGGGTGGTGACAGAGAGTTTCATCTTCCCTCCTaGAGCTCTGATACTGACTCT +
Preference number: 2 (lower is better)
Translates to: SSGLFVPRSYAEEGGDREFHLPS*SSDTDS
Trigger: AGAGTCAGTATCAGAGCTGCAGGAGGGAAGATGAAA...CTCTCTGTCACCACCCTCTTCTGCATATGAGCGGGGAACAAAAAGGCCAGATGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000196814.5
3UTR-3UTR CCA 90 bp GAAGTTGGTGTATCATATCTGTCATCTGGCCTTTTTGTTCCCCGCTCATATGCAAGTAGCCCCGGCAGTTaGCTGACCCACAGAAACACT +
Preference number: 2 (lower is better)
Translates to: EVGVSYLSSGLFVPRSYASSPGS*LTHRNT
Trigger: AGTGTTTCTGTGGGTCAGCCAACTGCCGGGGCTACT...TGCATATGAGCGGGGAACAAAAAGGCCAGATGACAGATATGATACACCAACTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000196814.5
3UTR-3UTR TCA 90 bp CTACTGCCTCTGATGGCCTGTAACTGTTACACCAACAGCTCACAACTAGGGGTCCACAGCTATGATTCATaGAACGAGAGCAATTCCCTT +
Preference number: 2 (lower is better)
Translates to: LLPLMACNCYTNSSQLGVHSYDS*NESNSL
Trigger: AAGGGAATTGCTCTCGTTTCATGAATCATAGCTGTG...GACCCCTAGTTGTGAGCTGTTGGTGTAACAGTTACAGGCCATCAGAGGCAGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000196814.5
3UTR-3UTR CCA 90 bp GGCAGCCTGCGTTGGGATATTTACATGATAACAAATCCAACCTTGCAGGAGAATTCTTTGCCAGCTCACTaGAGGTGTCTGCTTCTGCTG +
Preference number: 2 (lower is better)
Translates to: GSLRWDIYMITNPTLQENSLPAH*RCLLLL
Trigger: CAGCAGAAGCAGACACCTCCAGTGAGCTGGCAAAGA...ATTCTCCTGCAAGGTTGGATTTGTTATCATGTAAATATCCCAACGCAGGCTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000196814.5
3UTR CAA 90 bp GACTGGGCCTGGAGCTTGTACTGGCATTACAGGAACATTGGAGTCTaGGTGTACAACACTTTCATTCTGAGCTACATACTGAGAACTGGA +
Preference number: 2 (lower is better)
Translates to: DWAWSLYWHYRNIGV*VYNTFILSYILRTG
Trigger: TCCAGTTCTCAGTATGTAGCTCAGAATGAAAGTGTTGTACACCAAGACTCCAATGTTCCTGTAATGCCAGTACAAGCTCCAGGCCCAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000196814.5
3UTR-3UTR TCA 90 bp GGCAGCCTGCGTTGGGATATTTACATGATAACAAATCCAACCTTGCAGGAGAATGTCTTTGGAGCTGTTTaGTCTCTGAAGGCAGCAGCA +
Preference number: 2 (lower is better)
Translates to: GSLRWDIYMITNPTLQENVFGAV*SLKAAA
Trigger: TGCTGCTGCCTTCAGAGATCAAACAGCTCCAAAGAC...ATTCTCCTGCAAGGTTGGATTTGTTATCATGTAAATATCCCAACGCAGGCTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000196814.5
3UTR-3UTR TCA 90 bp TTACAGCTGACACCTGCAGGTTTGAACTGCTCAGGATGGTGGGTCATCACATCATGTGAGTGTGTGTTCTaGATGAGCTTAAGACAGGTA +
Preference number: 2 (lower is better)
Translates to: LQLTPAGLNCSGWWVITSCECVF*MSLRQV
Trigger: TACCTGTCTTAAGCTCATTCAGAACACACACTCACA...TGATGTGATGACCCACCATCCTGAGCAGTTCAAACCTGCAGGTGTCAGCTGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000196814.5
3UTR-3UTR GCA 90 bp AAACCACAAGGCAGCCTGCGTTGGGATATTTACATGATAACAAATCCAACCTTGCCTGCAGGTTTGAACTaGTCAGGATGGTGGGTCATC +
Preference number: 2 (lower is better)
Translates to: KPQGSLRWDIYMITNPTLPAGLN*SGWWVI
Trigger: GATGACCCACCATCCTGAGCAGTTCAAACCTGCAGG...CAAGGTTGGATTTGTTATCATGTAAATATCCCAACGCAGGCTGCCTTGTGGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
ENSMUST00000200460.5
3UTR-3UTR GCA 90 bp TGTTTCACATTCTCATTGCACTCCAGGTCCTCGGGGTTCTTACAGTACTTCAGCTTCTTTGCTTTTCTTTaGCAGCTCACTGGAGGTGTC +
Preference number: 2 (lower is better)
Translates to: CFTFSLHSRSSGFLQYFSFFAFL*QLTGGV
Trigger: GACACCTCCAGTGAGCTGGCAAAGAAAAGCAAAGAA...GCTGAAGTACTGTAAGAACCCCGAGGACCTGGAGTGCAATGAGAATGTGAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000196814.5
ENSMUST00000197399.2
3UTR-3UTR CCA 90 bp GCTAGGGTCTTGTTTTTCTTCAGCACGAAGTTGGAAATGGAGTTGAGAAAAGGATGCCATTGCTGTCTTTaGGCTCTGTCTCCGTGTCTG +
Preference number: 2 (lower is better)
Translates to: ARVLFFFSTKLEMELRKGCHCCL*ALSPCL
Trigger: CAGACACGGAGACAGAGCCCAAAGACAGCAATGGCA...TCCTTTTCTCAACTCCATTTCCAACTTCGTGCTGAAGAAAAACAAGACCCTAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000196814.5
3UTR CAA 90 bp ACAGCCCCAAACTTCTGCATGTACTTCTTGATGTACTCCTTGGTTTaGTGTTTCACATTCTCATTGCACTCCAGGTCCTCGGGGTTCTTA +
Preference number: 2 (lower is better)
Translates to: TAPNFCMYFLMYSLV*CFTFSLHSRSSGFL
Trigger: TAAGAACCCCGAGGACCTGGAGTGCAATGAGAATGTGAAACACAAAACCAAGGAGTACATCAAGAAGTACATGCAGAAGTTTGGGGCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000196814.5
ENSMUST00000197399.2
3UTR-3UTR TCA 90 bp CTCACTTTCAACATCAGACACTCCCTCTTCTTCATCTTGGGATGGTGTTTCCTCTCAGGCACTGGACAATaGACTGAGACATCTCTTTTC +
Preference number: 2 (lower is better)
Translates to: LTFNIRHSLFFILGWCFLSGTGQ*TETSLF
Trigger: GAAAAGAGATGTCTCAGTTCATTGTCCAGTGCCTGA...GAGGAAACACCATCCCAAGATGAAGAAGAGGGAGTGTCTGATGTTGAAAGTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000196814.5
3UTR-3UTR TCA 90 bp CTTACAGTACTTCAGCTCCTTATTCATAACTCCATGAGTCAGCTTTCGGGCGAGTCAGGCACTGGACAATaGACTGAGACATCTCTTTTC +
Preference number: 2 (lower is better)
Translates to: LTVLQLLIHNSMSQLSGESGTGQ*TETSLF
Trigger: GAAAAGAGATGTCTCAGTTCATTGTCCAGTGCCTGA...CTCGCCCGAAAGCTGACTCATGGAGTTATGAATAAGGAGCTGAAGTACTGTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000196814.5
ENSMUST00000197399.2
3UTR-3UTR GCA 90 bp GGCAGCCTGCGTTGGGATATTTACATGATAACAAATCCAACCTTGCAGGAGAATGACAGAGCTCACTTTTaGAGCTTACAGCTGACACCT +
Preference number: 2 (lower is better)
Translates to: GSLRWDIYMITNPTLQENDRAHF*SLQLTP
Trigger: AGGTGTCAGCTGTAAGCTGCAAAAGTGAGCTCTGTC...ATTCTCCTGCAAGGTTGGATTTGTTATCATGTAAATATCCCAACGCAGGCTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
ENSMUST00000200460.5
3UTR-3UTR CCA 90 bp TTGCTGTTGCTTCTGAGCTTCCCTCTGTGCCACCTCTTGTTCAAACAACTTCCTCCTGTTAGGAGTCTTTaGAGCTGTTTGATCTCTGAA +
Preference number: 2 (lower is better)
Translates to: LLLLLSFPLCHLLFKQLPPVRSL*SCLISE
Trigger: TTCAGAGATCAAACAGCTCCAAAGACTCCTAACAGG...AGGAAGTTGTTTGAACAAGAGGTGGCACAGAGGGAAGCTCAGAAGCAACAGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000196814.5
ENSMUST00000197655.2
3UTR CAA 90 bp CTTATCAACATAGCACAAGGCGGCCAAACCACAAGGCAGCCTGCGTaGGGATATTTACATGATAACAAATCCAACCTTGCAGGAGAATTT +
Preference number: 2 (lower is better)
Translates to: LINIAQGGQTTRQPA*GYLHDNKSNLAGEF
Trigger: AAATTCTCCTGCAAGGTTGGATTTGTTATCATGTAAATATCCCAACGCAGGCTGCCTTGTGGTTTGGCCGCCTTGTGCTATGTTGATAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
ENSMUST00000200460.5
3UTR-3UTR GCA 90 bp GAAGTTGGTGTATCATATCTGTCATCTGGCCTTTTTGTTCCCCGCTCATATGCACTCGTTCAGCTACTGTaGTCTCCTTTTCAGTTTGAC +
Preference number: 2 (lower is better)
Translates to: EVGVSYLSSGLFVPRSYALVQLL*SPFQFD
Trigger: GTCAAACTGAAAAGGAGAGCACAGTAGCTGAACGAG...TGCATATGAGCGGGGAACAAAAAGGCCAGATGACAGATATGATACACCAACTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000196814.5
ENSMUST00000197655.2
3UTR-3UTR GCA 90 bp TTGCTGTTGCTTCTGAGCTTCCCTCTGTGCCACCTCTTGTTCAAACAACTTCCTACTTCTGAGCTTCTTTaGCATATCTTTGGAACTGGT +
Preference number: 2 (lower is better)
Translates to: LLLLLSFPLCHLLFKQLPTSELL*HIFGTG
Trigger: ACCAGTTCCAAAGATATGGCAAAGAAGCTCAGAAGT...AGGAAGTTGTTTGAACAAGAGGTGGCACAGAGGGAAGCTCAGAAGCAACAGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000196814.5
3UTR CAA 90 bp ATGTACTTCTTGATGTACTCCTTGGTTTTGTGTTTCACATTCTCATaGCACTCCAGGTCCTCGGGGTTCTTACAGTACTTCAGCTCCTTA +
Preference number: 2 (lower is better)
Translates to: MYFLMYSLVLCFTFS*HSRSSGFLQYFSSL
Trigger: TAAGGAGCTGAAGTACTGTAAGAACCCCGAGGACCTGGAGTGCAATGAGAATGTGAAACACAAAACCAAGGAGTACATCAAGAAGTACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000196814.5
ENSMUST00000197399.2
3UTR CAA 90 bp ATGCTATTTTCACTTATAATCTTCAGTCTGCGGAATATGAGTTTCTaGGGAGTATCTGTATCCATTTCCGTGCTCGGCTTGGCAGAAGGG +
Preference number: 2 (lower is better)
Translates to: MLFSLIIFSLRNMSF*GVSVSISVLGLAEG
Trigger: CCCTTCTGCCAAGCCGAGCACGGAAATGGATACAGATACTCCCAAGAAACTCATATTCCGCAGACTGAAGATTATAAGTGAAAATAGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000196814.5
3UTR CAA 90 bp CTTGCTGCCCTGAGAAGCTTTAGATCTTTCCAACTGTCTAGTAACTaGGTAGCCAAATCACTTATATCCACTGTTTTATCTGGTGGCTCC +
Preference number: 2 (lower is better)
Translates to: LAALRSFRSFQLSSN*VAKSLISTVLSGGS
Trigger: GGAGCCACCAGATAAAACAGTGGATATAAGTGATTTGGCTACCAAGTTACTAGACAGTTGGAAAGATCTAAAGCTTCTCAGGGCAGCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000196814.5
3UTR-3UTR TCA 90 bp CTTATTCATAACTCCATGAGTCAGCTTTCGGGCGAGGTGCTTGAAATCTTCAGTCACTGGACAATGAACTaGGACATCTCTTTTCTGAAT +
Preference number: 2 (lower is better)
Translates to: LIHNSMSQLSGEVLEIFSHWTMN*DISFLN
Trigger: ATTCAGAAAAGAGATGTCTCAGTTCATTGTCCAGTG...ACTGAAGATTTCAAGCACCTCGCCCGAAAGCTGACTCATGGAGTTATGAATAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000196814.5
ENSMUST00000197399.2
3UTR-3UTR CCA 90 bp GGCAGCCTGCGTTGGGATATTTACATGATAACAAATCCAACCTTGCAGGAGAATGATAAACTAAGAACCTaGTTCTTATCAGAGAGGCCT +
Preference number: 2 (lower is better)
Translates to: GSLRWDIYMITNPTLQENDKLRT*FLSERP
Trigger: AGGCCTCTCTGATAAGAACCAGGTTCTTAGTTTATC...ATTCTCCTGCAAGGTTGGATTTGTTATCATGTAAATATCCCAACGCAGGCTGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000196814.5
3UTR-3UTR CCA 90 bp GAAGACTTGGCTGGGCATAACTCTGCACAATTGGAGGAGTTGTCTGTGAATAAGAGTTTGACTTTTCTTTaGAATCCGATACACCTCCTA +
Preference number: 2 (lower is better)
Translates to: EDLAGHNSAQLEELSVNKSLTFL*NPIHLL
Trigger: TAGGAGGTGTATCGGATTCCAAAGAAAAGTCAAACT...CTTATTCACAGACAACTCCTCCAATTGTGCAGAGTTATGCCCAGCCAAGTCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000196814.5
3UTR CAA 90 bp TTGGAGGAGTTGTCTGTGAATAAGGCGAGGTCACACTATAGACAGTaGAACATGTCTGTCCTTGATAATATATGGTTGTTTGAGATTGTG +
Preference number: 2 (lower is better)
Translates to: LEELSVNKARSHYRQ*NMSVLDNIWLFEIV
Trigger: CACAATCTCAAACAACCATATATTATCAAGGACAGACATGTTCAACTGTCTATAGTGTGACCTCGCCTTATTCACAGACAACTCCTCCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000196814.5
3UTR-3UTR CCA 90 bp ATGCTATTTTCACTTATAATCTTCAGTCTGCGGAATATGAGTTTCTTGGGAGTACTGGGTTTCACAGTTTaGTTCACAGCTATGATTCAT +
Preference number: 2 (lower is better)
Translates to: MLFSLIIFSLRNMSFLGVLGFTV*FTAMIH
Trigger: ATGAATCATAGCTGTGAACCAAACTGTGAAACCCAG...TACTCCCAAGAAACTCATATTCCGCAGACTGAAGATTATAAGTGAAAATAGCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000196814.5
3UTR-3UTR CAA 90 bp CCGTGGGGTAGGGCAGAAGCCACAGGATTCATCCTTTCCGCTCATACTCCACTCGGGGGAGACCCAGATTaGAGAATGGGGTCGTGTGGC +
Preference number: 3 (lower is better)
Translates to: PWGRAEATGFILSAHTPLGGDPD*RMGSCG
Trigger: GCCACACGACCCCATTCTCAAATCTGGGTCTCCCCC...GAGTGGAGTATGAGCGGAAAGGATGAATCCTGTGGCTTCTGCCCTACCCCACGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
ENSMUST00000200460.5
3UTR CCA 72 bp CACAGAGGCTGCCACATGCGGCACCACTGGCACAGATaGGGGAGCAGCAAGGGATTCTGTAGAATGTCCTAC +
Preference number: 3 (lower is better)
Translates to: HRGCHMRHHWHR*GSSKGFCRMSY
Trigger: GTAGGACATTCTACAGAATCCCTTGCTGCTCCCCCATCTGTGCCAGTGGTGCCGCATGTGGCAGCCTCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000196814.5
3UTR CCA 72 bp GGAAACTTCCACAGAGGCTGCCACATGCGGCACCACTaGCACAGATGGGGGAGCAGCAAGGGATTCTGTAGA +
Preference number: 3 (lower is better)
Translates to: GNFHRGCHMRHH*HRWGSSKGFCR
Trigger: TCTACAGAATCCCTTGCTGCTCCCCCATCTGTGCCAGTGGTGCCGCATGTGGCAGCCTCTGTGGAAGTTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000196814.5
3UTR CCA 72 bp TGGTGGGTCATCACATCAGTAGCACAGCCTTGGCCGTaGGGTAGGGCAGAAGCCACAGGATTCATCCTTTCC +
Preference number: 3 (lower is better)
Translates to: WWVITSVAQPWP*GRAEATGFILS
Trigger: GGAAAGGATGAATCCTGTGGCTTCTGCCCTACCCCACGGCCAAGGCTGTGCTACTGATGTGATGACCCACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
ENSMUST00000197399.2
ENSMUST00000200460.5
3UTR CCA 72 bp TCAGGATGGTGGGTCATCACATCAGTAGCACAGCCTTaGCCGTGGGGTAGGGCAGAAGCCACAGGATTCATC +
Preference number: 3 (lower is better)
Translates to: SGWWVITSVAQP*PWGRAEATGFI
Trigger: GATGAATCCTGTGGCTTCTGCCCTACCCCACGGCCAAGGCTGTGCTACTGATGTGATGACCCACCATCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
ENSMUST00000197399.2
ENSMUST00000200460.5
3UTR GCA 72 bp ATAGTGGCTTCACTCTCAACTTTGGACTCGCACAGCTaGTGTGGGAGGAGCTGCTGGGACTGCAGCTCTTCA +
Preference number: 3 (lower is better)
Translates to: IVASLSTLDSHS*CGRSCWDCSSS
Trigger: TGAAGAGCTGCAGTCCCAGCAGCTCCTCCCACAGCAGCTGTGCGAGTCCAAAGTTGAGAGTGAAGCCACTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000196814.5
3UTR CCA 72 bp GTTGCTGGGATCCACATAGGCTTGCATGGGGTAACCTaGTGGGTACCCAGCAAAGGGGTGATGAGAGGCATT +
Preference number: 3 (lower is better)
Translates to: VAGIHIGLHGVT*WVPSKGVMRGI
Trigger: AATGCCTCTCATCACCCCTTTGCTGGGTACCCACCAGGTTACCCCATGCAAGCCTATGTGGATCCCAGCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000196814.5
ENSMUST00000197655.2
3UTR-3UTR CAA 90 bp CCCGGCCGTCGCCAAGCTCTGCCATCCAGATCCACAACAGTGACAACCCATGACACAACTAGGGGTCATTaGGAGACAGAGCTCACTTTT +
Preference number: 3 (lower is better)
Translates to: PGRRQALPSRSTTVTTHDTTRGH*ETELTF
Trigger: AAAAGTGAGCTCTGTCTCCAAATGACCCCTAGTTGT...GTCATGGGTTGTCACTGTTGTGGATCTGGATGGCAGAGCTTGGCGACGGCCGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000196814.5
3UTR-3UTR CAA 90 bp GTTGCTGTTGCTTCTGAGCTTCCCTCTGTGCCACCTCTTGTTCAAACAACTTCCGGGGGAGACCCAGATTaGAGAATGGGGTCGTGTGGC +
Preference number: 3 (lower is better)
Translates to: VAVASELPSVPPLVQTTSGGDPD*RMGSCG
Trigger: GCCACACGACCCCATTCTCAAATCTGGGTCTCCCCC...GGAAGTTGTTTGAACAAGAGGTGGCACAGAGGGAAGCTCAGAAGCAACAGCAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000196814.5
3UTR CCA 72 bp CATTTCAGCTTCATGCTCAAGGCTGGCATCATCTCCTaGGCTTTCCCAAGTAGGAGGATCCCACTGAGTCTG +
Preference number: 3 (lower is better)
Translates to: HFSFMLKAGIIS*AFPSRRIPLSL
Trigger: CAGACTCAGTGGGATCCTCCTACTTGGGAAAGCCCAGGAGATGATGCCAGCCTTGAGCATGAAGCTGAAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000196814.5
3UTR-3UTR CAA 90 bp GGGCAGAAGCCACAGGATTCATCCTTTCCGCTCATACTCCACTCTGGCCTGAGGACAACTAGGGGTCATTaGGAGACAGAGCTCACTTTT +
Preference number: 3 (lower is better)
Translates to: GQKPQDSSFPLILHSGLRTTRGH*ETELTF
Trigger: AAAAGTGAGCTCTGTCTCCAAATGACCCCTAGTTGT...CCTCAGGCCAGAGTGGAGTATGAGCGGAAAGGATGAATCCTGTGGCTTCTGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
ENSMUST00000200460.5
3UTR-3UTR CAA 90 bp TCACTTTTGCAGCTTACAGCTGACACCTGCAGGTTTGAACTGCTCAGGATGGTGTTTCGGGCGAGGTGCTaGAAATCTTCAGTGGTGGTG +
Preference number: 3 (lower is better)
Translates to: SLLQLTADTCRFELLRMVFRARC*KSSVVV
Trigger: CACCACCACTGAAGATTTCAAGCACCTCGCCCGAAA...CACCATCCTGAGCAGTTCAAACCTGCAGGTGTCAGCTGTAAGCTGCAAAAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000196814.5
ENSMUST00000197399.2
3UTR TCA 72 bp AGCTCTGCCATCCAGATCCACAACAGTGACAACCCATaGCGTTCCAGAAATGACTTGAGGCAGGACTGTGAG +
Preference number: 3 (lower is better)
Translates to: SSAIQIHNSDNP*RSRNDLRQDCE
Trigger: CTCACAGTCCTGCCTCAAGTCATTTCTGGAACGTCATGGGTTGTCACTGTTGTGGATCTGGATGGCAGAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000196814.5
3UTR TCA 72 bp GGCTTGGCAGAAGGGTCCGGTGTATTAAGCGGTGTGTaGGCACGTGATGTATTCTCACTAGAATACCCGTCT +
Preference number: 3 (lower is better)
Translates to: GLAEGSGVLSGV*ARDVFSLEYPS
Trigger: AGACGGGTATTCTAGTGAGAATACATCACGTGCTCACACACCGCTTAATACACCGGACCCTTCTGCCAAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000196814.5
3UTR GCA 72 bp AGACAGAGCTCACTTTTGCAGCTTACAGCTGACACCTaGAGGTTTGAACTGCTCAGGATGGTGGGTCATCAC +
Preference number: 3 (lower is better)
Translates to: RQSSLLQLTADT*RFELLRMVGHH
Trigger: GTGATGACCCACCATCCTGAGCAGTTCAAACCTGCAGGTGTCAGCTGTAAGCTGCAAAAGTGAGCTCTGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
ENSMUST00000197399.2
ENSMUST00000200460.5
3UTR-3UTR CAA 90 bp TCTGGCCTTTTTGTTCCCCGCTCATATGCAGAAGAGGGTGGTGACAGAGAGCCCCAGTTTGACTTTTCTTaGGAATCCGATACACCTCCA +
Preference number: 3 (lower is better)
Translates to: SGLFVPRSYAEEGGDREPQFDFS*ESDTPP
Trigger: TGGAGGTGTATCGGATTCCAAAGAAAAGTCAAACTG...GGGCTCTCTGTCACCACCCTCTTCTGCATATGAGCGGGGAACAAAAAGGCCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000197655.2
3UTR TCA 72 bp GAATCCGATACACCTCCAAAACAAGGCCGGCGCCAGTaGGTTAACCACCTCTGTCCTCTTTTCACCTATTAC +
Preference number: 3 (lower is better)
Translates to: ESDTPPKQGRRQ*VNHLCPLFTYY
Trigger: GTAATAGGTGAAAAGAGGACAGAGGTGGTTAACTCACTGGCGCCGGCCTTGTTTTGGAGGTGTATCGGATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000197655.2
3UTR TCA 72 bp CAGTTGGCTGTACCACCACTCCTTGTGGGTGAGCTGTaGAAATCTGCTGTCCCTGGATATACTGAAGACTTG +
Preference number: 3 (lower is better)
Translates to: QLAVPPLLVGEL*KSAVPGYTEDL
Trigger: CAAGTCTTCAGTATATCCAGGGACAGCAGATTTTCACAGCTCACCCACAAGGAGTGGTGGTACAGCCAACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000196814.5
3UTR GCA 72 bp TTTTGCAGCTTACAGCTGACACCTGCAGGTTTGAACTaGTCAGGATGGTGGGTCATCACATCAGTAGCACAG +
Preference number: 3 (lower is better)
Translates to: FCSLQLTPAGLN*SGWWVITSVAQ
Trigger: CTGTGCTACTGATGTGATGACCCACCATCCTGAGCAGTTCAAACCTGCAGGTGTCAGCTGTAAGCTGCAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
ENSMUST00000197399.2
ENSMUST00000200460.5
3UTR CCA 72 bp CTCCCAGACATTGTAATTCTGTCCTTGGACTGGGCCTaGAGCTTGTACTGGCATTACAGGAACATTGGAGTC +
Preference number: 3 (lower is better)
Translates to: LPDIVILSLDWA*SLYWHYRNIGV
Trigger: GACTCCAATGTTCCTGTAATGCCAGTACAAGCTCCAGGCCCAGTCCAAGGACAGAATTACAATGTCTGGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000196814.5
3UTR-3UTR CAA 90 bp GAAGACTTGGCTGGGCATAACTCTGCACAATTGGAGGAGTTGTCTGTGAATAAGTTTCGGGCGAGGTGCTaGAAATCTTCAGTGGTGGTG +
Preference number: 3 (lower is better)
Translates to: EDLAGHNSAQLEELSVNKFRARC*KSSVVV
Trigger: CACCACCACTGAAGATTTCAAGCACCTCGCCCGAAA...CTTATTCACAGACAACTCCTCCAATTGTGCAGAGTTATGCCCAGCCAAGTCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000196814.5
3UTR-3UTR CAA 90 bp GTGGGTAACTTACTGACTTCAATAGTGGCTTCACTCTCAACTTTGGACTCGCACTGTTTCACATTCTCATaGCACTCCAGGTCCTCGGGG +
Preference number: 3 (lower is better)
Translates to: VGNLLTSIVASLSTLDSHCFTFS*HSRSSG
Trigger: CCCCGAGGACCTGGAGTGCAATGAGAATGTGAAACA...GTGCGAGTCCAAAGTTGAGAGTGAAGCCACTATTGAAGTCAGTAAGTTACCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000196814.5
3UTR TCA 72 bp CTCTCTCTAGACCTGTTAGGAGTCTTTGGAGCTGTTTaGTCTCTGAAGGCAGCAGCATCTCTTCCTCGTTCA +
Preference number: 3 (lower is better)
Translates to: LSLDLLGVFGAV*SLKAAASLPRS
Trigger: TGAACGAGGAAGAGATGCTGCTGCCTTCAGAGATCAAACAGCTCCAAAGACTCCTAACAGGTCTAGAGAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000196814.5
ENSMUST00000197655.2
3UTR TCA 72 bp AGAGGCATTATATCCCAGAGAGTCAAAGGGGAGTGGTaGTGTCATCCCCAAGTTCTGCATCTGTTGCTGTTG +
Preference number: 3 (lower is better)
Translates to: RGIISQRVKGEW*CHPQVLHLLLL
Trigger: CAACAGCAACAGATGCAGAACTTGGGGATGACATCACCACTCCCCTTTGACTCTCTGGGATATAATGCCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000196814.5
ENSMUST00000197655.2
3UTR TCA 72 bp AGGATTCATCCTTTCCGCTCATACTCCACTCTGGCCTaGGGTCACTCTAGTTCAGTGTCCTCTTTAGGTTTG +
Preference number: 3 (lower is better)
Translates to: RIHPFRSYSTLA*GHSSSVSSLGL
Trigger: CAAACCTAAAGAGGACACTGAACTAGAGTGACCTCAGGCCAGAGTGGAGTATGAGCGGAAAGGATGAATCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000196814.5
ENSMUST00000197399.2
3UTR TCA 72 bp AGAAGGGTCCGGTGTATTAAGCGGTGTGTGAGCACGTaGTGTATTCTCACTAGAATACCCGTCTCCTTCACT +
Preference number: 3 (lower is better)
Translates to: RRVRCIKRCVST*CILTRIPVSFT
Trigger: AGTGAAGGAGACGGGTATTCTAGTGAGAATACATCACGTGCTCACACACCGCTTAATACACCGGACCCTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000196814.5
3UTR CCA 72 bp GTACAACACTTTCATTCTGAGCTACATACTGAGAACTaGAAACTTCCACAGAGGCTGCCACATGCGGCACCA +
Preference number: 3 (lower is better)
Translates to: VQHFHSELHTEN*KLPQRLPHAAP
Trigger: TGGTGCCGCATGTGGCAGCCTCTGTGGAAGTTTCCAGTTCTCAGTATGTAGCTCAGAATGAAAGTGTTGTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000196814.5
3UTR CCA 72 bp GTAATTCTGTCCTTGGACTGGGCCTGGAGCTTGTACTaGCATTACAGGAACATTGGAGTCTTGGTGTACAAC +
Preference number: 3 (lower is better)
Translates to: VILSLDWAWSLY*HYRNIGVLVYN
Trigger: GTTGTACACCAAGACTCCAATGTTCCTGTAATGCCAGTACAAGCTCCAGGCCCAGTCCAAGGACAGAATTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000196814.5
3UTR-3UTR CAA 90 bp AGCTTACAGCTGACACCTGCAGGTTTGAACTGCTCAGGATGGTGGGTCATCACATCACAAAGTCTTTCCTaGATTCCAGCACATAGATGC +
Preference number: 3 (lower is better)
Translates to: SLQLTPAGLNCSGWWVITSQSLS*IPAHRC
Trigger: GCATCTATGTGCTGGAATCAAGGAAAGACTTTGTGA...TGTGATGACCCACCATCCTGAGCAGTTCAAACCTGCAGGTGTCAGCTGTAAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
ENSMUST00000200460.5
3UTR-3UTR CAA 90 bp GTGGGTAACTTACTGACTTCAATAGTGGCTTCACTCTCAACTTTGGACTCGCACTCCTCTTTGCCATCCTaGCATTCTAGCTCACTAGTG +
Preference number: 3 (lower is better)
Translates to: VGNLLTSIVASLSTLDSHSSLPS*HSSSLV
Trigger: CACTAGTGAGCTAGAATGCAAGGATGGCAAAGAGGA...GTGCGAGTCCAAAGTTGAGAGTGAAGCCACTATTGAAGTCAGTAAGTTACCCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000196814.5
3UTR TCA 72 bp TTATTTGTTACAACCATTTCAGGTGGCTGTAAGGACTaGGGCTGCCCTGGTGCAACTATTGAAGTCACGGCT +
Preference number: 3 (lower is better)
Translates to: LFVTTISGGCKD*GCPGATIEVTA
Trigger: AGCCGTGACTTCAATAGTTGCACCAGGGCAGCCTCAGTCCTTACAGCCACCTGAAATGGTTGTAACAAATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000196814.5
3UTR CCA 72 bp AACTGTTACACCAACAGCTCACAACTAGGGGTCATTTaGAGACAGAGCTCACTTTTGCAGCTTACAGCTGAC +
Preference number: 3 (lower is better)
Translates to: NCYTNSSQLGVI*RQSSLLQLTAD
Trigger: GTCAGCTGTAAGCTGCAAAAGTGAGCTCTGTCTCCAAATGACCCCTAGTTGTGAGCTGTTGGTGTAACAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
ENSMUST00000200460.5
3UTR CCA 72 bp CTGGGCCTGGAGCTTGTACTGGCATTACAGGAACATTaGAGTCTTGGTGTACAACACTTTCATTCTGAGCTA +
Preference number: 3 (lower is better)
Translates to: LGLELVLALQEH*SLGVQHFHSEL
Trigger: TAGCTCAGAATGAAAGTGTTGTACACCAAGACTCCAATGTTCCTGTAATGCCAGTACAAGCTCCAGGCCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000196814.5
3UTR-3UTR CAA 90 bp CTCGGGGTTCTTACAGTACTTCAGCTCCTTATTCATAACTCCATGAGTCAGCTTCTTCTTTGCTTTTCTTaGCCAGCTCACTGGAGGTGT +
Preference number: 3 (lower is better)
Translates to: LGVLTVLQLLIHNSMSQLLLCFS*PAHWRC
Trigger: ACACCTCCAGTGAGCTGGCAAAGAAAAGCAAAGAAG...AAGCTGACTCATGGAGTTATGAATAAGGAGCTGAAGTACTGTAAGAACCCCGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000196814.5
ENSMUST00000197399.2
3UTR-3UTR CAA 90 bp CAGCTGACACCTGCAGGTTTGAACTGCTCAGGATGGTGGGTCATCACATCAGTATTCTTGATGTACTCCTaGGTTTTGTGTTTCACATTC +
Preference number: 3 (lower is better)
Translates to: QLTPAGLNCSGWWVITSVFLMYS*VLCFTF
Trigger: GAATGTGAAACACAAAACCAAGGAGTACATCAAGAA...TACTGATGTGATGACCCACCATCCTGAGCAGTTCAAACCTGCAGGTGTCAGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000196814.5
ENSMUST00000197399.2
3UTR TCA 72 bp GGTCAGCTGGTGATGTTAACAAGCTCCTTGCTGCCCTaGGAAGCTTTAGATCTTTCCAACTGTCTAGTAACT +
Preference number: 3 (lower is better)
Translates to: GQLVMLTSSLLP*EALDLSNCLVT
Trigger: AGTTACTAGACAGTTGGAAAGATCTAAAGCTTCTCAGGGCAGCAAGGAGCTTGTTAACATCACCAGCTGACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000196814.5
3UTR TCA 72 bp AGAATACTGCTGTTGTACACTGACAGACTGTTGGTTTaGCTCCCAGACATTGTAATTCTGTCCTTGGACTGG +
Preference number: 3 (lower is better)
Translates to: RILLLYTDRLLV*LPDIVILSLDW
Trigger: CCAGTCCAAGGACAGAATTACAATGTCTGGGAGTCAAACCAACAGTCTGTCAGTGTACAACAGCAGTATTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000196814.5
3UTR GCA 72 bp CCACCTCTGTCCTCTTTTCACCTATTACACTTTTCATaGATCATCCAACTTCCCAACCATCTTCCTGTTTCT +
Preference number: 3 (lower is better)
Translates to: PPLSSFHLLHFS*IIQLPNHLPVS
Trigger: AGAAACAGGAAGATGGTTGGGAAGTTGGATGATGCATGAAAAGTGTAATAGGTGAAAAGAGGACAGAGGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000197655.2
3UTR CCA 72 bp TCAATTCTAACCATGAGCCGGGATAAACTAAGAACCTaGTTCTTATCAGAGAGGCCTTCACCATTTTCCATC +
Preference number: 3 (lower is better)
Translates to: SILTMSRDKLRT*FLSERPSPFSI
Trigger: GATGGAAAATGGTGAAGGCCTCTCTGATAAGAACCAGGTTCTTAGTTTATCCCGGCTCATGGTTAGAATTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000196814.5
3UTR CCA 72 bp AAATCACTTATATCCACTGTTTTATCTGGTGGCTCCTaGCTTCTCTCACTTTCAACATCAGACACTCCCTCT +
Preference number: 3 (lower is better)
Translates to: KSLISTVLSGGS*LLSLSTSDTPS
Trigger: AGAGGGAGTGTCTGATGTTGAAAGTGAGAGAAGCCAGGAGCCACCAGATAAAACAGTGGATATAAGTGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000196814.5
3UTR TCA 72 bp TCTTGTTTTTCTTCAGCACGAAGTTGGAAATGGAGTTaGGAAAAGGAGACACATGGTCAGCTGGTGATGTTA +
Preference number: 3 (lower is better)
Translates to: SCFSSARSWKWS*EKETHGQLVML
Trigger: TAACATCACCAGCTGACCATGTGTCTCCTTTTCTCAACTCCATTTCCAACTTCGTGCTGAAGAAAAACAAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000196814.5
3UTR TCA 72 bp TTTGAGATTGTGCAGGAGAATACTGCTGTTGTACACTaGCAGACTGTTGGTTTGACTCCCAGACATTGTAAT +
Preference number: 3 (lower is better)
Translates to: FEIVQENTAVVH*QTVGLTPRHCN
Trigger: ATTACAATGTCTGGGAGTCAAACCAACAGTCTGTCAGTGTACAACAGCAGTATTCTCCTGCACAATCTCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000196814.5
3UTR GCA 72 bp CTTTGGAATCCGATACACCTCCTATTACACTTTTCATaGATCATCCAACTTCCCAACCATCTTCCTGTTTCT +
Preference number: 3 (lower is better)
Translates to: LWNPIHLLLHFS*IIQLPNHLPVS
Trigger: AGAAACAGGAAGATGGTTGGGAAGTTGGATGATGCATGAAAAGTGTAATAGGAGGTGTATCGGATTCCAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000196814.5
3UTR TCA 72 bp CAGGAGAATTTATACTATCCTCACAAAGTCTTTCCTTaGTTCCAGCACATAGATGCTAACAGCAAACAAAAA +
Preference number: 3 (lower is better)
Translates to: QENLYYPHKVFP*FQHIDANSKQK
Trigger: TTTTTGTTTGCTGTTAGCATCTATGTGCTGGAATCAAGGAAAGACTTTGTGAGGATAGTATAAATTCTCCTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
ENSMUST00000200460.5
CDS-3UTR TCA 90 bp GAGGTGCGCATGGGTCTGTGCGCTGACAGCACCGCCAAGGGGGAGACCCAGATTGGTGGCTGTAAGGACTaGGGCTGCCCTGGTGCAACT +
Preference number: 4 (lower is better)
Translates to: EVRMGLCADSTAKGETQIGGCKD*GCPGAT
Trigger: AGTTGCACCAGGGCAGCCTCAGTCCTTACAGCCACC...AATCTGGGTCTCCCCCTTGGCGGTGCTGTCAGCGCACAGACCCATGCGCACCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS-3UTR GCA 90 bp AGGGTAAAGGATCTGGGGGAGGTGCGCATGGGTCTGTGCGCTGACAGCACCGCCTGCTGTGGGAGGAGCTaGTGGGACTGCAGCTCTTCA +
Preference number: 4 (lower is better)
Translates to: RVKDLGEVRMGLCADSTACCGRS*WDCSSS
Trigger: TGAAGAGCTGCAGTCCCAGCAGCTCCTCCCACAGCA...GGCGGTGCTGTCAGCGCACAGACCCATGCGCACCTCCCCCAGATCCTTTACCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS-3UTR GCA 90 bp AGGGTAAAGGATCTGGGGGAGGTGCGCATGGGTCTGTGCGCTGACAGCACCGCCCTCTGTCTCCGTGTCTaGCTCCGGTTCAGATGTGGG +
Preference number: 4 (lower is better)
Translates to: RVKDLGEVRMGLCADSTALCLRV*LRFRCG
Trigger: CCCACATCTGAACCGGAGGCAGACACGGAGACAGAG...GGCGGTGCTGTCAGCGCACAGACCCATGCGCACCTCCCCCAGATCCTTTACCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS-3UTR GCA 90 bp TGGGTCTGTGCGCTGACAGCACCGCCAAGGGGGAGACCCAGATTTGAGAATGGGGCCGTCGCCAAGCTCTaGCATCCAGATCCACAACAG +
Preference number: 4 (lower is better)
Translates to: WVCALTAPPRGRPRFENGAVAKL*HPDPQQ
Trigger: CTGTTGTGGATCTGGATGGCAGAGCTTGGCGACGGC...CCCATTCTCAAATCTGGGTCTCCCCCTTGGCGGTGCTGTCAGCGCACAGACCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000153838.8
CDS-3UTR CCA 90 bp GGGCAGAAGCCACAGGATTCATCCTTTCCGCTCATACTCCACTCTGGCCTGAGGCACATGCGGCACCACTaGCACAGATGGGGGAGCAGC +
Preference number: 4 (lower is better)
Translates to: GQKPQDSSFPLILHSGLRHMRHH*HRWGSS
Trigger: GCTGCTCCCCCATCTGTGCCAGTGGTGCCGCATGTG...CCTCAGGCCAGAGTGGAGTATGAGCGGAAAGGATGAATCCTGTGGCTTCTGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS-3UTR TCA 90 bp GAGGTGCGCATGGGTCTGTGCGCTGACAGCACCGCCAAGGGGGAGACCCAGATTGTCTTTGGAGCTGTTTaGTCTCTGAAGGCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: EVRMGLCADSTAKGETQIVFGAV*SLKAAA
Trigger: TGCTGCTGCCTTCAGAGATCAAACAGCTCCAAAGAC...AATCTGGGTCTCCCCCTTGGCGGTGCTGTCAGCGCACAGACCCATGCGCACCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS-3UTR GCA 90 bp TGGGTCTGTGCGCTGACAGCACCGCCAAGGGGGAGACCCAGATTTGAGAATGGGAGGAGCTGCTGGGACTaGAGCTCTTCATCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: WVCALTAPPRGRPRFENGRSCWD*SSSSSS
Trigger: GGAAGAGGATGAAGAGCTGCAGTCCCAGCAGCTCCT...CCCATTCTCAAATCTGGGTCTCCCCCTTGGCGGTGCTGTCAGCGCACAGACCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS-3UTR CCA 90 bp AGGGTAAAGGATCTGGGGGAGGTGCGCATGGGTCTGTGCGCTGACAGCACCGCCGCATCTTCCCCAGCTTaGCAAATTCTTTCCACCGCT +
Preference number: 4 (lower is better)
Translates to: RVKDLGEVRMGLCADSTAASSPA*QILSTA
Trigger: AGCGGTGGAAAGAATTTGCCAAGCTGGGGAAGATGC...GGCGGTGCTGTCAGCGCACAGACCCATGCGCACCTCCCCCAGATCCTTTACCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS-3UTR CCA 90 bp TGGGTCTGTGCGCTGACAGCACCGCCAAGGGGGAGACCCAGATTTGAGAATGGGTTGCATGGGGTAACCTaGTGGGTACCCAGCAAAGGG +
Preference number: 4 (lower is better)
Translates to: WVCALTAPPRGRPRFENGLHGVT*WVPSKG
Trigger: CCCTTTGCTGGGTACCCACCAGGTTACCCCATGCAA...CCCATTCTCAAATCTGGGTCTCCCCCTTGGCGGTGCTGTCAGCGCACAGACCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS-3UTR GCA 90 bp GGGGTAGGGCAGAAGCCACAGGATTCATCCTTTCCGCTCATACTCCACTCTGGCTGCTGTGGGAGGAGCTaGTGGGACTGCAGCTCTTCA +
Preference number: 4 (lower is better)
Translates to: GVGQKPQDSSFPLILHSGCCGRS*WDCSSS
Trigger: TGAAGAGCTGCAGTCCCAGCAGCTCCTCCCACAGCA...GCCAGAGTGGAGTATGAGCGGAAAGGATGAATCCTGTGGCTTCTGCCCTACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS-3UTR CCA 90 bp TGGGTCTGTGCGCTGACAGCACCGCCAAGGGGGAGACCCAGATTTGAGAATGGGTCTTTGCCAGCTCACTaGAGGTGTCTGCTTCTGCTG +
Preference number: 4 (lower is better)
Translates to: WVCALTAPPRGRPRFENGSLPAH*RCLLLL
Trigger: CAGCAGAAGCAGACACCTCCAGTGAGCTGGCAAAGA...CCCATTCTCAAATCTGGGTCTCCCCCTTGGCGGTGCTGTCAGCGCACAGACCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS-3UTR TCA 90 bp AGGTTTGAACTGCTCAGGATGGTGGGTCATCACATCAGTAGCACAGCCTTGGCCGCCCCGGCAGTTGGCTaGCCCACAGAAACACTTCTG +
Preference number: 4 (lower is better)
Translates to: RFELLRMVGHHISSTALAAPAVG*PTETLL
Trigger: CAGAAGTGTTTCTGTGGGTCAGCCAACTGCCGGGGC...GGCCAAGGCTGTGCTACTGATGTGATGACCCACCATCCTGAGCAGTTCAAACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000153838.8
CDS-3UTR TCA 90 bp GGGGTAGGGCAGAAGCCACAGGATTCATCCTTTCCGCTCATACTCCACTCTGGCCCCTGGTGCAACTATTaGAGTCACGGCTGCAGTTGG +
Preference number: 4 (lower is better)
Translates to: GVGQKPQDSSFPLILHSGPWCNY*SHGCSW
Trigger: CCAACTGCAGCCGTGACTTCAATAGTTGCACCAGGG...GCCAGAGTGGAGTATGAGCGGAAAGGATGAATCCTGTGGCTTCTGCCCTACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS-3UTR GCA 90 bp TGGGATCCACATAGGCTTGCATGGGGTAACCTGGTGGGTACCCAGCAAAGGGGTAGGAGCTGCTGGGACTaGAGCTCTTCATCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: WDPHRLAWGNLVGTQQRGRSCWD*SSSSSS
Trigger: GGAAGAGGATGAAGAGCTGCAGTCCCAGCAGCTCCT...ACCCCTTTGCTGGGTACCCACCAGGTTACCCCATGCAAGCCTATGTGGATCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000197655.2
CDS-3UTR GCA 90 bp CGTGTGGCCAAGGTCTTCCCTAGGCTACTGCCTCTGATGGCCTGTAACTGTTACAACTTCCACAGAGGCTaGCACATGCGGCACCACTGG +
Preference number: 4 (lower is better)
Translates to: RVAKVFPRLLPLMACNCYNFHRG*HMRHHW
Trigger: CCAGTGGTGCCGCATGTGGCAGCCTCTGTGGAAGTT...GTAACAGTTACAGGCCATCAGAGGCAGTAGCCTAGGGAAGACCTTGGCCACACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS-3UTR CCA 90 bp AGGGCAGAAGCCACAGGATTCATCCTTTCCGCTCATACTCCACTCTGGCCTGAGCATGGGGTAACCTGGTaGGTACCCAGCAAAGGGGTG +
Preference number: 4 (lower is better)
Translates to: RAEATGFILSAHTPLWPEHGVTW*VPSKGV
Trigger: CACCCCTTTGCTGGGTACCCACCAGGTTACCCCATG...CTCAGGCCAGAGTGGAGTATGAGCGGAAAGGATGAATCCTGTGGCTTCTGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS-3UTR CCA 90 bp GGGCAGAAGCCACAGGATTCATCCTTTCCGCTCATACTCCACTCTGGCCTGAGGTTGCATGGGGTAACCTaGTGGGTACCCAGCAAAGGG +
Preference number: 4 (lower is better)
Translates to: GQKPQDSSFPLILHSGLRLHGVT*WVPSKG
Trigger: CCCTTTGCTGGGTACCCACCAGGTTACCCCATGCAA...CCTCAGGCCAGAGTGGAGTATGAGCGGAAAGGATGAATCCTGTGGCTTCTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS-3UTR CCA 90 bp AGCTTACAGCTGACACCTGCAGGTTTGAACTGCTCAGGATGGTGGGTCATCACACACATGCGGCACCACTaGCACAGATGGGGGAGCAGC +
Preference number: 4 (lower is better)
Translates to: SLQLTPAGLNCSGWWVITHMRHH*HRWGSS
Trigger: GCTGCTCCCCCATCTGTGCCAGTGGTGCCGCATGTG...TGTGATGACCCACCATCCTGAGCAGTTCAAACCTGCAGGTGTCAGCTGTAAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
3UTR CAA 72 bp GTGGCTGTAAGGACTGAGGCTGCCCTGGTGCAACTATaGAAGTCACGGCTGCAGTTGGCTGTACCACCACTC +
Preference number: 4 (lower is better)
Translates to: VAVRTEAALVQL*KSRLQLAVPPL
Trigger: GAGTGGTGGTACAGCCAACTGCAGCCGTGACTTCAATAGTTGCACCAGGGCAGCCTCAGTCCTTACAGCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000196814.5
CDS-3UTR TCA 90 bp GGGCAGAAGCCACAGGATTCATCCTTTCCGCTCATACTCCACTCTGGCCTGAGGCCCACCCTAGGTTTCTaGGCTCTTCTGATGAGTGCA +
Preference number: 4 (lower is better)
Translates to: GQKPQDSSFPLILHSGLRPTLGF*ALLMSA
Trigger: TGCACTCATCAGAAGAGCTCAGAAACCTAGGGTGGG...CCTCAGGCCAGAGTGGAGTATGAGCGGAAAGGATGAATCCTGTGGCTTCTGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS-3UTR TCA 90 bp CCGTGGGGTAGGGCAGAAGCCACAGGATTCATCCTTTCCGCTCATACTCCACTCGTCAAAGGGGAGTGGTaGTGTCATCCCCAAGTTCTG +
Preference number: 4 (lower is better)
Translates to: PWGRAEATGFILSAHTPLVKGEW*CHPQVL
Trigger: CAGAACTTGGGGATGACATCACCACTCCCCTTTGAC...GAGTGGAGTATGAGCGGAAAGGATGAATCCTGTGGCTTCTGCCCTACCCCACGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS-3UTR TCA 90 bp GACACCTGCAGGTTTGAACTGCTCAGGATGGTGGGTCATCACATCAGTAGCACAGGTGGCTGTAAGGACTaGGGCTGCCCTGGTGCAACT +
Preference number: 4 (lower is better)
Translates to: DTCRFELLRMVGHHISSTGGCKD*GCPGAT
Trigger: AGTTGCACCAGGGCAGCCTCAGTCCTTACAGCCACC...TGTGCTACTGATGTGATGACCCACCATCCTGAGCAGTTCAAACCTGCAGGTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS-3UTR TCA 90 bp CCGTGGGGTAGGGCAGAAGCCACAGGATTCATCCTTTCCGCTCATACTCCACTCAATCTTCAGTGGTGGTaGTCCTGCCCACCTTGCAGT +
Preference number: 4 (lower is better)
Translates to: PWGRAEATGFILSAHTPLNLQWW*SCPPCS
Trigger: ACTGCAAGGTGGGCAGGATCACCACCACTGAAGATT...GAGTGGAGTATGAGCGGAAAGGATGAATCCTGTGGCTTCTGCCCTACCCCACGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS-3UTR GCA 90 bp GAGGTGCGCATGGGTCTGTGCGCTGACAGCACCGCCAAGGGGGAGACCCAGATTCTGAGTCCCTTTCTCTaGATCTACCAACATTCTGAA +
Preference number: 4 (lower is better)
Translates to: EVRMGLCADSTAKGETQILSPFL*IYQHSE
Trigger: TTCAGAATGTTGGTAGATGCAGAGAAAGGGACTCAG...AATCTGGGTCTCCCCCTTGGCGGTGCTGTCAGCGCACAGACCCATGCGCACCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS-3UTR GCA 90 bp GGGCAGAAGCCACAGGATTCATCCTTTCCGCTCATACTCCACTCTGGCCTGAGGCACAGGTTCCATAGCTaGTGTCAGGCTGCTGGTATG +
Preference number: 4 (lower is better)
Translates to: GQKPQDSSFPLILHSGLRHRFHS*CQAAGM
Trigger: CATACCAGCAGCCTGACAGCAGCTATGGAACCTGTG...CCTCAGGCCAGAGTGGAGTATGAGCGGAAAGGATGAATCCTGTGGCTTCTGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS-3UTR GCA 90 bp TGGGTCTGTGCGCTGACAGCACCGCCAAGGGGGAGACCCAGATTTGAGAATGGGGGTGTACACTCACACTaGATTCGCTTAATATCCCGG +
Preference number: 4 (lower is better)
Translates to: WVCALTAPPRGRPRFENGGVHSH*IRLISR
Trigger: CCGGGATATTAAGCGAATGCAGTGTGAGTGTACACC...CCCATTCTCAAATCTGGGTCTCCCCCTTGGCGGTGCTGTCAGCGCACAGACCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS-3UTR GCA 90 bp AGGGCAGAAGCCACAGGATTCATCCTTTCCGCTCATACTCCACTCTGGCCTGAGAGGAGCTGCTGGGACTaGAGCTCTTCATCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: RAEATGFILSAHTPLWPERSCWD*SSSSSS
Trigger: GGAAGAGGATGAAGAGCTGCAGTCCCAGCAGCTCCT...CTCAGGCCAGAGTGGAGTATGAGCGGAAAGGATGAATCCTGTGGCTTCTGCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS-3UTR CCA 90 bp GAGGTGCGCATGGGTCTGTGCGCTGACAGCACCGCCAAGGGGGAGACCCAGATTCTGGAGTCGGTTTCTTaGAATACTGCTATCATCAGA +
Preference number: 4 (lower is better)
Translates to: EVRMGLCADSTAKGETQILESVS*NTAIIR
Trigger: TCTGATGATAGCAGTATTCCAAGAAACCGACTCCAG...AATCTGGGTCTCCCCCTTGGCGGTGCTGTCAGCGCACAGACCCATGCGCACCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS-3UTR CCA 90 bp ATGCTAGGTGTGGGCAGAAGCACCTTTCCAGCATTAGGGTTGCTGGGATCCACATGTGGGAGGAGCTGCTaGGACTGCAGCTCTTCATCC +
Preference number: 4 (lower is better)
Translates to: MLGVGRSTFPALGLLGSTCGRSC*DCSSSS
Trigger: GGATGAAGAGCTGCAGTCCCAGCAGCTCCTCCCACA...TGTGGATCCCAGCAACCCTAATGCTGGAAAGGTGCTTCTGCCCACACCTAGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000197655.2
CDS-3UTR CCA 90 bp GGCTTGCATGGGGTAACCTGGTGGGTACCCAGCAAAGGGGTGATGAGAGGCATTTGCCATTGCTGTCTTTaGGCTCTGTCTCCGTGTCTG +
Preference number: 4 (lower is better)
Translates to: GLHGVTWWVPSKGVMRGICHCCL*ALSPCL
Trigger: CAGACACGGAGACAGAGCCCAAAGACAGCAATGGCA...AATGCCTCTCATCACCCCTTTGCTGGGTACCCACCAGGTTACCCCATGCAAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000197655.2
CDS-3UTR CCA 90 bp AGGGCAGAAGCCACAGGATTCATCCTTTCCGCTCATACTCCACTCTGGCCTGAGGCTGGCATCATCTCCTaGGCTTTCCCAAGTAGGAGG +
Preference number: 4 (lower is better)
Translates to: RAEATGFILSAHTPLWPEAGIIS*AFPSRR
Trigger: CCTCCTACTTGGGAAAGCCCAGGAGATGATGCCAGC...CTCAGGCCAGAGTGGAGTATGAGCGGAAAGGATGAATCCTGTGGCTTCTGCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000153838.8
ENSMUST00000197399.2
ENSMUST00000200460.5
3UTR CAA 72 bp CTTTCCAGCATTAGGGTTGCTGGGATCCACATAGGCTaGCATGGGGTAACCTGGTGGGTACCCAGCAAAGGG +
Preference number: 4 (lower is better)
Translates to: LSSIRVAGIHIG*HGVTWWVPSKG
Trigger: CCCTTTGCTGGGTACCCACCAGGTTACCCCATGCAAGCCTATGTGGATCCCAGCAACCCTAATGCTGGAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000196814.5
ENSMUST00000197655.2
CDS-3UTR TCA 90 bp CTACTGCCTCTGATGGCCTGTAACTGTTACACCAACAGCTCACAACTAGGGGTCGGGTTTGAGTCTACTTaGAGAGGGGGAGCTGGGGAG +
Preference number: 4 (lower is better)
Translates to: LLPLMACNCYTNSSQLGVGFEST*RGGAGE
Trigger: CTCCCCAGCTCCCCCTCTTCAAGTAGACTCAAACCC...GACCCCTAGTTGTGAGCTGTTGGTGTAACAGTTACAGGCCATCAGAGGCAGTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000153838.8
CDS-3UTR TCA 90 bp TGGGTCTGTGCGCTGACAGCACCGCCAAGGGGGAGACCCAGATTTGAGAATGGGTATCTTAGAGCCATCTaGAACCTCTTCTTCCTTCCC +
Preference number: 4 (lower is better)
Translates to: WVCALTAPPRGRPRFENGYLRAI*NLFFLP
Trigger: GGGAAGGAAGAAGAGGTTTCAGATGGCTCTAAGATA...CCCATTCTCAAATCTGGGTCTCCCCCTTGGCGGTGCTGTCAGCGCACAGACCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS-3UTR TCA 90 bp CTACTGCCTCTGATGGCCTGTAACTGTTACACCAACAGCTCACAACTAGGGGTCTGCAGAAGAGGGTGGTaGCAGAGAGCCCCGTCGTTT +
Preference number: 4 (lower is better)
Translates to: LLPLMACNCYTNSSQLGVCRRGW*QRAPSF
Trigger: AAACGACGGGGCTCTCTGTCACCACCCTCTTCTGCA...GACCCCTAGTTGTGAGCTGTTGGTGTAACAGTTACAGGCCATCAGAGGCAGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS-3UTR TCA 90 bp GCAGGTTTGAACTGCTCAGGATGGTGGGTCATCACATCAGTAGCACAGCCTTGGTGTTGCTGTTGCTTCTaGGCTTCCCTCTGTGCCACC +
Preference number: 4 (lower is better)
Translates to: AGLNCSGWWVITSVAQPWCCCCF*ASLCAT
Trigger: GGTGGCACAGAGGGAAGCTCAGAAGCAACAGCAACA...CCAAGGCTGTGCTACTGATGTGATGACCCACCATCCTGAGCAGTTCAAACCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS-3UTR TCA 90 bp GGGGTAGGGCAGAAGCCACAGGATTCATCCTTTCCGCTCATACTCCACTCTGGCTGGAGGAGTTGTCTGTaGATAAGGCGAGGTCACACT +
Preference number: 4 (lower is better)
Translates to: GVGQKPQDSSFPLILHSGWRSCL*IRRGHT
Trigger: AGTGTGACCTCGCCTTATTCACAGACAACTCCTCCA...GCCAGAGTGGAGTATGAGCGGAAAGGATGAATCCTGTGGCTTCTGCCCTACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS-3UTR TCA 90 bp AGGTTTGAACTGCTCAGGATGGTGGGTCATCACATCAGTAGCACAGCCTTGGCCCCCTGGTGCAACTATTaGAGTCACGGCTGCAGTTGG +
Preference number: 4 (lower is better)
Translates to: RFELLRMVGHHISSTALAPWCNY*SHGCSW
Trigger: CCAACTGCAGCCGTGACTTCAATAGTTGCACCAGGG...GGCCAAGGCTGTGCTACTGATGTGATGACCCACCATCCTGAGCAGTTCAAACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS-3UTR GCA 90 bp CTGTCATCTGGCCTTTTTGTTCCCCGCTCATATGCAGAAGAGGGTGGTGACAGACTCTGTCTCCGTGTCTaGCTCCGGTTCAGATGTGGG +
Preference number: 4 (lower is better)
Translates to: LSSGLFVPRSYAEEGGDRLCLRV*LRFRCG
Trigger: CCCACATCTGAACCGGAGGCAGACACGGAGACAGAG...TCTGTCACCACCCTCTTCTGCATATGAGCGGGGAACAAAAAGGCCAGATGACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000197655.2
CDS-3UTR GCA 90 bp CAGCTGACACCTGCAGGTTTGAACTGCTCAGGATGGTGGGTCATCACATCAGTAAACTTCCACAGAGGCTaGCACATGCGGCACCACTGG +
Preference number: 4 (lower is better)
Translates to: QLTPAGLNCSGWWVITSVNFHRG*HMRHHW
Trigger: CCAGTGGTGCCGCATGTGGCAGCCTCTGTGGAAGTT...TACTGATGTGATGACCCACCATCCTGAGCAGTTCAAACCTGCAGGTGTCAGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS-3UTR GCA 90 bp TGGGTCTGTGCGCTGACAGCACCGCCAAGGGGGAGACCCAGATTTGAGAATGGGTGTGCAGGAGAATACTaGTGTTGTACACTGACAGAC +
Preference number: 4 (lower is better)
Translates to: WVCALTAPPRGRPRFENGCAGEY*CCTLTD
Trigger: GTCTGTCAGTGTACAACAGCAGTATTCTCCTGCACA...CCCATTCTCAAATCTGGGTCTCCCCCTTGGCGGTGCTGTCAGCGCACAGACCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS-3UTR CCA 90 bp GGGCAGAAGCCACAGGATTCATCCTTTCCGCTCATACTCCACTCTGGCCTGAGGACTTGCAGCCAGCTGTaGCCTAGATGTCACATGAAG +
Preference number: 4 (lower is better)
Translates to: GQKPQDSSFPLILHSGLRTCSQL*PRCHMK
Trigger: CTTCATGTGACATCTAGGCCACAGCTGGCTGCAAGT...CCTCAGGCCAGAGTGGAGTATGAGCGGAAAGGATGAATCCTGTGGCTTCTGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000153838.8
CDS-3UTR CCA 90 bp GAGGTGCGCATGGGTCTGTGCGCTGACAGCACCGCCAAGGGGGAGACCCAGATTGCTCTGAAGTCCGTTTaGATTCTCTTTCTAGTTTTG +
Preference number: 4 (lower is better)
Translates to: EVRMGLCADSTAKGETQIALKSV*ILFLVL
Trigger: CAAAACTAGAAAGAGAATCCAAACGGACTTCAGAGC...AATCTGGGTCTCCCCCTTGGCGGTGCTGTCAGCGCACAGACCCATGCGCACCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS-3UTR CCA 90 bp GACACCTGCAGGTTTGAACTGCTCAGGATGGTGGGTCATCACATCAGTAGCACAGCTGCTGGTATGTGGTaGTGGGCCTTTCCTGTTGGG +
Preference number: 4 (lower is better)
Translates to: DTCRFELLRMVGHHISSTAAGMW*WAFPVG
Trigger: CCCAACAGGAAAGGCCCACCACCACATACCAGCAGC...TGTGCTACTGATGTGATGACCCACCATCCTGAGCAGTTCAAACCTGCAGGTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS-3UTR CCA 90 bp CTGGTGGGTACCCAGCAAAGGGGTGATGAGAGGCATTATATCCCAGAGAGTCAAGCTGCTGGTATGTGGTaGTGGGCCTTTCCTGTTGGG +
Preference number: 4 (lower is better)
Translates to: LVGTQQRGDERHYIPESQAAGMW*WAFPVG
Trigger: CCCAACAGGAAAGGCCCACCACCACATACCAGCAGC...TTGACTCTCTGGGATATAATGCCTCTCATCACCCCTTTGCTGGGTACCCACCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000196814.5
CDS-3UTR CCA 90 bp GAGGTGCGCATGGGTCTGTGCGCTGACAGCACCGCCAAGGGGGAGACCCAGATTCTGGGTTTCACAGTTTaGTTCACAGCTATGATTCAT +
Preference number: 4 (lower is better)
Translates to: EVRMGLCADSTAKGETQILGFTV*FTAMIH
Trigger: ATGAATCATAGCTGTGAACCAAACTGTGAAACCCAG...AATCTGGGTCTCCCCCTTGGCGGTGCTGTCAGCGCACAGACCCATGCGCACCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000153838.8
CDS-3UTR CCA 90 bp AGGGTAAAGGATCTGGGGGAGGTGCGCATGGGTCTGTGCGCTGACAGCACCGCCTTCACAGTCCATTTCTaGGTTTCACAGTTTGGTTCA +
Preference number: 4 (lower is better)
Translates to: RVKDLGEVRMGLCADSTAFTVHF*VSQFGS
Trigger: TGAACCAAACTGTGAAACCCAGAAATGGACTGTGAA...GGCGGTGCTGTCAGCGCACAGACCCATGCGCACCTCCCCCAGATCCTTTACCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000153838.8
CDS-3UTR CCA 90 bp GACACCTGCAGGTTTGAACTGCTCAGGATGGTGGGTCATCACATCAGTAGCACATGTGGGAGGAGCTGCTaGGACTGCAGCTCTTCATCC +
Preference number: 4 (lower is better)
Translates to: DTCRFELLRMVGHHISSTCGRSC*DCSSSS
Trigger: GGATGAAGAGCTGCAGTCCCAGCAGCTCCTCCCACA...TGTGCTACTGATGTGATGACCCACCATCCTGAGCAGTTCAAACCTGCAGGTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS-3UTR CCA 90 bp GCAGGTTTGAACTGCTCAGGATGGTGGGTCATCACATCAGTAGCACAGCCTTGGCCACATAGGCTTGCATaGGGTAACCTGGTGGGTACC +
Preference number: 4 (lower is better)
Translates to: AGLNCSGWWVITSVAQPWPHRLA*GNLVGT
Trigger: GGTACCCACCAGGTTACCCCATGCAAGCCTATGTGG...CCAAGGCTGTGCTACTGATGTGATGACCCACCATCCTGAGCAGTTCAAACCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS-3UTR CCA 90 bp CGTGTGGCCAAGGTCTTCCCTAGGCTACTGCCTCTGATGGCCTGTAACTGTTACTCCTTGGACTGGGCCTaGAGCTTGTACTGGCATTAC +
Preference number: 4 (lower is better)
Translates to: RVAKVFPRLLPLMACNCYSLDWA*SLYWHY
Trigger: GTAATGCCAGTACAAGCTCCAGGCCCAGTCCAAGGA...GTAACAGTTACAGGCCATCAGAGGCAGTAGCCTAGGGAAGACCTTGGCCACACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS-3UTR CCA 90 bp AGGGCAGAAGCCACAGGATTCATCCTTTCCGCTCATACTCCACTCTGGCCTGAGTCCTTGGACTGGGCCTaGAGCTTGTACTGGCATTAC +
Preference number: 4 (lower is better)
Translates to: RAEATGFILSAHTPLWPESLDWA*SLYWHY
Trigger: GTAATGCCAGTACAAGCTCCAGGCCCAGTCCAAGGA...CTCAGGCCAGAGTGGAGTATGAGCGGAAAGGATGAATCCTGTGGCTTCTGCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS-3UTR CCA 90 bp TGGGTCTGTGCGCTGACAGCACCGCCAAGGGGGAGACCCAGATTTGAGAATGGGGATATACTGAAGACTTaGCTGGGCATAACTCTGCAC +
Preference number: 4 (lower is better)
Translates to: WVCALTAPPRGRPRFENGDILKT*LGITLH
Trigger: GTGCAGAGTTATGCCCAGCCAAGTCTTCAGTATATC...CCCATTCTCAAATCTGGGTCTCCCCCTTGGCGGTGCTGTCAGCGCACAGACCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS-3UTR CCA 90 bp AGGTTTGAACTGCTCAGGATGGTGGGTCATCACATCAGTAGCACAGCCTTGGCCAGTCACGGCTGCAGTTaGCTGTACCACCACTCCTTG +
Preference number: 4 (lower is better)
Translates to: RFELLRMVGHHISSTALASHGCS*LYHHSL
Trigger: CAAGGAGTGGTGGTACAGCCAACTGCAGCCGTGACT...GGCCAAGGCTGTGCTACTGATGTGATGACCCACCATCCTGAGCAGTTCAAACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS-3UTR CCA 90 bp GGGCAGAAGCCACAGGATTCATCCTTTCCGCTCATACTCCACTCTGGCCTGAGGCTTCATGCTCAAGGCTaGCATCATCTCCTGGGCTTT +
Preference number: 4 (lower is better)
Translates to: GQKPQDSSFPLILHSGLRLHAQG*HHLLGF
Trigger: AAAGCCCAGGAGATGATGCCAGCCTTGAGCATGAAG...CCTCAGGCCAGAGTGGAGTATGAGCGGAAAGGATGAATCCTGTGGCTTCTGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000153838.8
ENSMUST00000197399.2
ENSMUST00000200460.5
CDS-3UTR TCA 90 bp CCGTGGGGTAGGGCAGAAGCCACAGGATTCATCCTTTCCGCTCATACTCCACTCGAATTCCCTTCTTCTTaGGCCTCTTGCAAAGACTGC +
Preference number: 4 (lower is better)
Translates to: PWGRAEATGFILSAHTPLEFPSS*ASCKDC
Trigger: GCAGTCTTTGCAAGAGGCTCAAGAAGAAGGGAATTC...GAGTGGAGTATGAGCGGAAAGGATGAATCCTGTGGCTTCTGCCCTACCCCACGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS-3UTR TCA 90 bp AGAGCTCACTTTTGCAGCTTACAGCTGACACCTGCAGGTTTGAACTGCTCAGGATGCAGAAGAGGGTGGTaGCAGAGAGCCCCGTCGTTT +
Preference number: 4 (lower is better)
Translates to: RAHFCSLQLTPAGLNCSGCRRGW*QRAPSF
Trigger: AAACGACGGGGCTCTCTGTCACCACCCTCTTCTGCA...TCCTGAGCAGTTCAAACCTGCAGGTGTCAGCTGTAAGCTGCAAAAGTGAGCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS-3UTR TCA 90 bp TGGGTCTGTGCGCTGACAGCACCGCCAAGGGGGAGACCCAGATTTGAGAATGGGGACAGACTGTTGGTTTaGCTCCCAGACATTGTAATT +
Preference number: 4 (lower is better)
Translates to: WVCALTAPPRGRPRFENGDRLLV*LPDIVI
Trigger: AATTACAATGTCTGGGAGTCAAACCAACAGTCTGTC...CCCATTCTCAAATCTGGGTCTCCCCCTTGGCGGTGCTGTCAGCGCACAGACCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS-3UTR TCA 90 bp TCTGGCCTTTTTGTTCCCCGCTCATATGCAGAAGAGGGTGGTGACAGAGAGCCCAGCTCCTTGCTGCCCTaGGAAGCTTTAGATCTTTCC +
Preference number: 4 (lower is better)
Translates to: SGLFVPRSYAEEGGDREPSSLLP*EALDLS
Trigger: GGAAAGATCTAAAGCTTCTCAGGGCAGCAAGGAGCT...GGGCTCTCTGTCACCACCCTCTTCTGCATATGAGCGGGGAACAAAAAGGCCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000197655.2
CDS-3UTR GCA 90 bp GAGGTGCGCATGGGTCTGTGCGCTGACAGCACCGCCAAGGGGGAGACCCAGATTGGTTTCTTGGAATACTaGTATCATCAGACTCTGTAT +
Preference number: 4 (lower is better)
Translates to: EVRMGLCADSTAKGETQIGFLEY*YHQTLY
Trigger: ATACAGAGTCTGATGATAGCAGTATTCCAAGAAACC...AATCTGGGTCTCCCCCTTGGCGGTGCTGTCAGCGCACAGACCCATGCGCACCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS-3UTR GCA 90 bp TCACTTTTGCAGCTTACAGCTGACACCTGCAGGTTTGAACTGCTCAGGATGGTGCTCTGTCTCCGTGTCTaGCTCCGGTTCAGATGTGGG +
Preference number: 4 (lower is better)
Translates to: SLLQLTADTCRFELLRMVLCLRV*LRFRCG
Trigger: CCCACATCTGAACCGGAGGCAGACACGGAGACAGAG...CACCATCCTGAGCAGTTCAAACCTGCAGGTGTCAGCTGTAAGCTGCAAAAGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS-3UTR GCA 90 bp GGGGTAGGGCAGAAGCCACAGGATTCATCCTTTCCGCTCATACTCCACTCTGGCCTGAGCTTCCCTCTGTaGCACCTCTTGTTCAAACAA +
Preference number: 4 (lower is better)
Translates to: GVGQKPQDSSFPLILHSGLSFPL*HLLFKQ
Trigger: TTGTTTGAACAAGAGGTGGCACAGAGGGAAGCTCAG...GCCAGAGTGGAGTATGAGCGGAAAGGATGAATCCTGTGGCTTCTGCCCTACCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS-3UTR CCA 90 bp CCCGGCCGTCGCCAAGCTCTGCCATCCAGATCCACAACAGTGACAACCCATGACACAACCACAACAGACTaGAGTCGGTTTCTTGGAATA +
Preference number: 4 (lower is better)
Translates to: PGRRQALPSRSTTVTTHDTTTTD*SRFLGI
Trigger: TATTCCAAGAAACCGACTCCAGTCTGTTGTGGTTGT...GTCATGGGTTGTCACTGTTGTGGATCTGGATGGCAGAGCTTGGCGACGGCCGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000196814.5
CDS-3UTR CCA 90 bp CCGTGGGGTAGGGCAGAAGCCACAGGATTCATCCTTTCCGCTCATACTCCACTCATCCACTGTTTTATCTaGTGGCTCCTGGCTTCTCTC +
Preference number: 4 (lower is better)
Translates to: PWGRAEATGFILSAHTPLIHCFI*WLLASL
Trigger: GAGAGAAGCCAGGAGCCACCAGATAAAACAGTGGAT...GAGTGGAGTATGAGCGGAAAGGATGAATCCTGTGGCTTCTGCCCTACCCCACGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS-3UTR CCA 90 bp TCACTTTTGCAGCTTACAGCTGACACCTGCAGGTTTGAACTGCTCAGGATGGTGCATGGGGTAACCTGGTaGGTACCCAGCAAAGGGGTG +
Preference number: 4 (lower is better)
Translates to: SLLQLTADTCRFELLRMVHGVTW*VPSKGV
Trigger: CACCCCTTTGCTGGGTACCCACCAGGTTACCCCATG...CACCATCCTGAGCAGTTCAAACCTGCAGGTGTCAGCTGTAAGCTGCAAAAGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS-3UTR CCA 90 bp GGGGTAGGGCAGAAGCCACAGGATTCATCCTTTCCGCTCATACTCCACTCTGGCTACCACCACTCCTTGTaGGTGAGCTGTGAAAATCTG +
Preference number: 4 (lower is better)
Translates to: GVGQKPQDSSFPLILHSGYHHSL*VSCENL
Trigger: CAGATTTTCACAGCTCACCCACAAGGAGTGGTGGTA...GCCAGAGTGGAGTATGAGCGGAAAGGATGAATCCTGTGGCTTCTGCCCTACCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS-3UTR CCA 90 bp AGCTTACAGCTGACACCTGCAGGTTTGAACTGCTCAGGATGGTGGGTCATCACAAGTCACGGCTGCAGTTaGCTGTACCACCACTCCTTG +
Preference number: 4 (lower is better)
Translates to: SLQLTPAGLNCSGWWVITSHGCS*LYHHSL
Trigger: CAAGGAGTGGTGGTACAGCCAACTGCAGCCGTGACT...TGTGATGACCCACCATCCTGAGCAGTTCAAACCTGCAGGTGTCAGCTGTAAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS-3UTR CCA 90 bp CACTTTTGCAGCTTACAGCTGACACCTGCAGGTTTGAACTGCTCAGGATGGTGGGCTGGCATCATCTCCTaGGCTTTCCCAAGTAGGAGG +
Preference number: 4 (lower is better)
Translates to: HFCSLQLTPAGLNCSGWWAGIIS*AFPSRR
Trigger: CCTCCTACTTGGGAAAGCCCAGGAGATGATGCCAGC...CCACCATCCTGAGCAGTTCAAACCTGCAGGTGTCAGCTGTAAGCTGCAAAAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000153838.8
ENSMUST00000197399.2
ENSMUST00000200460.5
CDS-3UTR TCA 90 bp CCCGGCCGTCGCCAAGCTCTGCCATCCAGATCCACAACAGTGACAACCCATGACAAATCATGTGATCTTTaGCTGGAAGAAGTCCGTACA +
Preference number: 4 (lower is better)
Translates to: PGRRQALPSRSTTVTTHDKSCDL*LEEVRT
Trigger: TGTACGGACTTCTTCCAGTCAAAGATCACATGATTT...GTCATGGGTTGTCACTGTTGTGGATCTGGATGGCAGAGCTTGGCGACGGCCGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000196814.5
CDS-3UTR TCA 90 bp GCTCTGCCATCCAGATCCACAACAGTGACAACCCATGACGTTCCAGAAATGACTCTCATCTTCAGAGTCTaGGCTCTCCCGTGCCCTGTT +
Preference number: 4 (lower is better)
Translates to: ALPSRSTTVTTHDVPEMTLIFRV*ALPCPV
Trigger: AACAGGGCACGGGAGAGCTCAGACTCTGAAGATGAG...AGTCATTTCTGGAACGTCATGGGTTGTCACTGTTGTGGATCTGGATGGCAGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000196814.5
CDS-3UTR TCA 90 bp CGTGTGGCCAAGGTCTTCCCTAGGCTACTGCCTCTGATGGCCTGTAACTGTTACTTCACATCTTATTCCTaGCGGAGGACTCTGGAGAGA +
Preference number: 4 (lower is better)
Translates to: RVAKVFPRLLPLMACNCYFTSYS*RRTLER
Trigger: TCTCTCCAGAGTCCTCCGTCAGGAATAAGATGTGAA...GTAACAGTTACAGGCCATCAGAGGCAGTAGCCTAGGGAAGACCTTGGCCACACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS-3UTR TCA 90 bp CACATGCGGCACCACTGGCACAGATGGGGGAGCAGCAAGGGATTCTGTAGAATGTGTGATCCACTTCGTTaGTCCCAATGTTCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: HMRHHWHRWGSSKGFCRMCDPLR*SQCSSS
Trigger: AGAAGAGGAACATTGGGATCAACGAAGTGGATCACA...CATTCTACAGAATCCCTTGCTGCTCCCCCATCTGTGCCAGTGGTGCCGCATGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000196814.5
CDS-3UTR TCA 90 bp AGGTTTGAACTGCTCAGGATGGTGGGTCATCACATCAGTAGCACAGCCTTGGCCGTTCCAGAAATGACTTaGGGCAGGACTGTGAGTGTG +
Preference number: 4 (lower is better)
Translates to: RFELLRMVGHHISSTALAVPEMT*GRTVSV
Trigger: CACACTCACAGTCCTGCCTCAAGTCATTTCTGGAAC...GGCCAAGGCTGTGCTACTGATGTGATGACCCACCATCCTGAGCAGTTCAAACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000153838.8
CDS-3UTR TCA 90 bp CCGTGGGGTAGGGCAGAAGCCACAGGATTCATCCTTTCCGCTCATACTCCACTCCGGTGTGTGAGCACGTaGTGTATTCTCACTAGAATA +
Preference number: 4 (lower is better)
Translates to: PWGRAEATGFILSAHTPLRCVST*CILTRI
Trigger: TATTCTAGTGAGAATACATCACGTGCTCACACACCG...GAGTGGAGTATGAGCGGAAAGGATGAATCCTGTGGCTTCTGCCCTACCCCACGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS-3UTR TCA 90 bp GGGCAGAAGCCACAGGATTCATCCTTTCCGCTCATACTCCACTCTGGCCTGAGGTCAGTCTGCGGAATATaGGTTTCTTGGGAGTATCTG +
Preference number: 4 (lower is better)
Translates to: GQKPQDSSFPLILHSGLRSVCGI*VSWEYL
Trigger: CAGATACTCCCAAGAAACTCATATTCCGCAGACTGA...CCTCAGGCCAGAGTGGAGTATGAGCGGAAAGGATGAATCCTGTGGCTTCTGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS-3UTR TCA 90 bp CACTTTTGCAGCTTACAGCTGACACCTGCAGGTTTGAACTGCTCAGGATGGTGGCTTGTGGGTGAGCTGTaGAAATCTGCTGTCCCTGGA +
Preference number: 4 (lower is better)
Translates to: HFCSLQLTPAGLNCSGWWLVGEL*KSAVPG
Trigger: TCCAGGGACAGCAGATTTTCACAGCTCACCCACAAG...CCACCATCCTGAGCAGTTCAAACCTGCAGGTGTCAGCTGTAAGCTGCAAAAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS-3UTR TCA 90 bp GCAGGTTTGAACTGCTCAGGATGGTGGGTCATCACATCAGTAGCACAGCCTTGGACCACTCCTTGTGGGTaGGCTGTGAAAATCTGCTGT +
Preference number: 4 (lower is better)
Translates to: AGLNCSGWWVITSVAQPWTTPCG*AVKICC
Trigger: ACAGCAGATTTTCACAGCTCACCCACAAGGAGTGGT...CCAAGGCTGTGCTACTGATGTGATGACCCACCATCCTGAGCAGTTCAAACCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS-3UTR TCA 90 bp CCGTGGGGTAGGGCAGAAGCCACAGGATTCATCCTTTCCGCTCATACTCCACTCTCAGGCACTGGACAATaGACTGAGACATCTCTTTTC +
Preference number: 4 (lower is better)
Translates to: PWGRAEATGFILSAHTPLSGTGQ*TETSLF
Trigger: GAAAAGAGATGTCTCAGTTCATTGTCCAGTGCCTGA...GAGTGGAGTATGAGCGGAAAGGATGAATCCTGTGGCTTCTGCCCTACCCCACGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS-3UTR GCA 90 bp AGGGTAAAGGATCTGGGGGAGGTGCGCATGGGTCTGTGCGCTGACAGCACCGCCCTGAACCAAGAAATGTaGCTTCAAATTGTGAAGATT +
Preference number: 4 (lower is better)
Translates to: RVKDLGEVRMGLCADSTALNQEM*LQIVKI
Trigger: AATCTTCACAATTTGAAGGCACATTTCTTGGTTCAG...GGCGGTGCTGTCAGCGCACAGACCCATGCGCACCTCCCCCAGATCCTTTACCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS-3UTR GCA 90 bp CCGTGGGGTAGGGCAGAAGCCACAGGATTCATCCTTTCCGCTCATACTCCACTCCTAGTTTTGTGCCATTaGTGTCTTTGGGCTCTGTCT +
Preference number: 4 (lower is better)
Translates to: PWGRAEATGFILSAHTPLLVLCH*CLWALS
Trigger: AGACAGAGCCCAAAGACAGCAATGGCACAAAACTAG...GAGTGGAGTATGAGCGGAAAGGATGAATCCTGTGGCTTCTGCCCTACCCCACGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS-3UTR GCA 90 bp GGGGTAGGGCAGAAGCCACAGGATTCATCCTTTCCGCTCATACTCCACTCTGGCTCCATTTCAGCTTCATaGTCAAGGCTGGCATCATCT +
Preference number: 4 (lower is better)
Translates to: GVGQKPQDSSFPLILHSGSISAS*SRLASS
Trigger: AGATGATGCCAGCCTTGAGCATGAAGCTGAAATGGA...GCCAGAGTGGAGTATGAGCGGAAAGGATGAATCCTGTGGCTTCTGCCCTACCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000153838.8
ENSMUST00000197399.2
ENSMUST00000200460.5
CDS-3UTR CCA 90 bp GCAGGTTTGAACTGCTCAGGATGGTGGGTCATCACATCAGTAGCACAGCCTTGGTTGAAGAGGGGGAGCTaGGGAGTTTGGAGAATCACT +
Preference number: 4 (lower is better)
Translates to: AGLNCSGWWVITSVAQPWLKRGS*GVWRIT
Trigger: AGTGATTCTCCAAACTCCCCAGCTCCCCCTCTTCAA...CCAAGGCTGTGCTACTGATGTGATGACCCACCATCCTGAGCAGTTCAAACCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000153838.8
CDS-3UTR CCA 90 bp GGGCAGAAGCCACAGGATTCATCCTTTCCGCTCATACTCCACTCTGGCCTGAGGCACTCTCGATTTTGGTaGCGAAGATTCTTCTGTAGC +
Preference number: 4 (lower is better)
Translates to: GQKPQDSSFPLILHSGLRHSRFW*RRFFCS
Trigger: GCTACAGAAGAATCTTCGCCACCAAAATCGAGAGTG...CCTCAGGCCAGAGTGGAGTATGAGCGGAAAGGATGAATCCTGTGGCTTCTGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000153838.8
CDS-3UTR CCA 90 bp AGCTCACTTTTGCAGCTTACAGCTGACACCTGCAGGTTTGAACTGCTCAGGATGCAGGCTGCTGGTATGTaGTGGTGGGCCTTTCCTGTT +
Preference number: 4 (lower is better)
Translates to: SSLLQLTADTCRFELLRMQAAGM*WWAFPV
Trigger: AACAGGAAAGGCCCACCACCACATACCAGCAGCCTG...CATCCTGAGCAGTTCAAACCTGCAGGTGTCAGCTGTAAGCTGCAAAAGTGAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS-3UTR CCA 90 bp GCTCTGCCATCCAGATCCACAACAGTGACAACCCATGACGTTCCAGAAATGACTCAGGCTGCTGGTATGTaGTGGTGGGCCTTTCCTGTT +
Preference number: 4 (lower is better)
Translates to: ALPSRSTTVTTHDVPEMTQAAGM*WWAFPV
Trigger: AACAGGAAAGGCCCACCACCACATACCAGCAGCCTG...AGTCATTTCTGGAACGTCATGGGTTGTCACTGTTGTGGATCTGGATGGCAGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000196814.5
CDS-3UTR CCA 90 bp GCTAGGTGTGGGCAGAAGCACCTTTCCAGCATTAGGGTTGCTGGGATCCACATAATCAGTTCTGAGTGCTaGGGCACAGATGATTCTCCC +
Preference number: 4 (lower is better)
Translates to: ARCGQKHLSSIRVAGIHIISSEC*GTDDSP
Trigger: GGGAGAATCATCTGTGCCCCAGCACTCAGAACTGAT...TATGTGGATCCCAGCAACCCTAATGCTGGAAAGGTGCTTCTGCCCACACCTAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000196814.5
CDS-3UTR CCA 90 bp CGCTCATATGCAGAAGAGGGTGGTGACAGAGAGCCCCGTCGTTTCCTTTTCTCTGCATCTTCCCCAGCTTaGCAAATTCTTTCCACCGCT +
Preference number: 4 (lower is better)
Translates to: RSYAEEGGDREPRRFLFSASSPA*QILSTA
Trigger: AGCGGTGGAAAGAATTTGCCAAGCTGGGGAAGATGC...AGAGAAAAGGAAACGACGGGGCTCTCTGTCACCACCCTCTTCTGCATATGAGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000196814.5
CDS-3UTR CCA 90 bp GGGCAGAAGCCACAGGATTCATCCTTTCCGCTCATACTCCACTCTGGCCTGAGGTTATCTGGTGGCTCCTaGCTTCTCTCACTTTCAACA +
Preference number: 4 (lower is better)
Translates to: GQKPQDSSFPLILHSGLRLSGGS*LLSLST
Trigger: TGTTGAAAGTGAGAGAAGCCAGGAGCCACCAGATAA...CCTCAGGCCAGAGTGGAGTATGAGCGGAAAGGATGAATCCTGTGGCTTCTGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS-3UTR CCA 90 bp CTGGCCTTTTTGTTCCCCGCTCATATGCAGAAGAGGGTGGTGACAGAGAGCCCCTTATCTGGTGGCTCCTaGCTTCTCTCACTTTCAACA +
Preference number: 4 (lower is better)
Translates to: LAFLFPAHMQKRVVTESPLSGGS*LLSLST
Trigger: TGTTGAAAGTGAGAGAAGCCAGGAGCCACCAGATAA...GGGGCTCTCTGTCACCACCCTCTTCTGCATATGAGCGGGGAACAAAAAGGCCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000197655.2
CDS-3UTR CCA 90 bp AGAGCTCACTTTTGCAGCTTACAGCTGACACCTGCAGGTTTGAACTGCTCAGGAGCTGGCATCATCTCCTaGGCTTTCCCAAGTAGGAGG +
Preference number: 4 (lower is better)
Translates to: RAHFCSLQLTPAGLNCSGAGIIS*AFPSRR
Trigger: CCTCCTACTTGGGAAAGCCCAGGAGATGATGCCAGC...TCCTGAGCAGTTCAAACCTGCAGGTGTCAGCTGTAAGCTGCAAAAGTGAGCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000153838.8
ENSMUST00000197399.2
ENSMUST00000200460.5
CDS-3UTR CCA 90 bp TTCAGTGGTGGTGATCCTGCCCACCTTGCAGTCAGGTTTCCGGTAAGGATTCAGCTTCATGCTCAAGGCTaGCATCATCTCCTGGGCTTT +
Preference number: 4 (lower is better)
Translates to: FSGGDPAHLAVRFPVRIQLHAQG*HHLLGF
Trigger: AAAGCCCAGGAGATGATGCCAGCCTTGAGCATGAAG...CTGAATCCTTACCGGAAACCTGACTGCAAGGTGGGCAGGATCACCACCACTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000197399.2
CDS-3UTR TCA 90 bp AGGTTTGAACTGCTCAGGATGGTGGGTCATCACATCAGTAGCACAGCCTTGGCCCAAAGGGGATACCTCTaGTCCAGTCACACTATCATC +
Preference number: 4 (lower is better)
Translates to: RFELLRMVGHHISSTALAQRGYL*SSHTII
Trigger: GATGATAGTGTGACTGGATCAGAGGTATCCCCTTTG...GGCCAAGGCTGTGCTACTGATGTGATGACCCACCATCCTGAGCAGTTCAAACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS-3UTR TCA 90 bp CTGGCCTTTTTGTTCCCCGCTCATATGCAGAAGAGGGTGGTGACAGAGAGCCCCATCACTTTCATCGCTTaGACTTGCAGAAGATCCAGA +
Preference number: 4 (lower is better)
Translates to: LAFLFPAHMQKRVVTESPITFIA*TCRRSR
Trigger: TCTGGATCTTCTGCAAGTTCAAGCGATGAAAGTGAT...GGGGCTCTCTGTCACCACCCTCTTCTGCATATGAGCGGGGAACAAAAAGGCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000196814.5
CDS-3UTR TCA 90 bp GACACCTGCAGGTTTGAACTGCTCAGGATGGTGGGTCATCACATCAGTAGCACAGATCTCGAGTCTGTCTaGCTTGTACTATCAACCCCG +
Preference number: 4 (lower is better)
Translates to: DTCRFELLRMVGHHISSTDLESV*LVLSTP
Trigger: CGGGGTTGATAGTACAAGTCAGACAGACTCGAGATC...TGTGCTACTGATGTGATGACCCACCATCCTGAGCAGTTCAAACCTGCAGGTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS-3UTR TCA 90 bp TTACAGCTGACACCTGCAGGTTTGAACTGCTCAGGATGGTGGGTCATCACATCATGGAGGTCTACCTGCTaGTCTTGGATCCCAATAGCC +
Preference number: 4 (lower is better)
Translates to: LQLTPAGLNCSGWWVITSWRSTC*SWIPIA
Trigger: GGCTATTGGGATCCAAGATCAGCAGGTAGACCTCCA...TGATGTGATGACCCACCATCCTGAGCAGTTCAAACCTGCAGGTGTCAGCTGTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS-3UTR TCA 90 bp GCTTTTCTTTGCCAGCTCACTGGAGGTGTCTGCTTCTGCTGTCTTGGGCTTTTTTGGAGGTCTACCTGCTaGTCTTGGATCCCAATAGCC +
Preference number: 4 (lower is better)
Translates to: AFLCQLTGGVCFCCLGLFWRSTC*SWIPIA
Trigger: GGCTATTGGGATCCAAGATCAGCAGGTAGACCTCCA...AAAAAGCCCAAGACAGCAGAAGCAGACACCTCCAGTGAGCTGGCAAAGAAAAGC
51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000196814.5
CDS-3UTR TCA 90 bp GCTCCTGGCTTCTCTCACTTTCAACATCAGACACTCCCTCTTCTTCATCTTGGGTTCCGGTGCTTGCACTaGTCCCTTGTCCTTCTGATG +
Preference number: 4 (lower is better)
Translates to: APGFSHFQHQTLPLLHLGFRCLH*SLVLLM
Trigger: CATCAGAAGGACAAGGGATCAGTGCAAGCACCGGAA...CCCAAGATGAAGAAGAGGGAGTGTCTGATGTTGAAAGTGAGAGAAGCCAGGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000196814.5
CDS-3UTR TCA 90 bp TGGGATCCACATAGGCTTGCATGGGGTAACCTGGTGGGTACCCAGCAAAGGGGTCTGAAACCGTCTGTTTaGACAGTAATCTCCATTTGG +
Preference number: 4 (lower is better)
Translates to: WDPHRLAWGNLVGTQQRGLKPSV*TVISIW
Trigger: CCAAATGGAGATTACTGTTCAAACAGACGGTTTCAG...ACCCCTTTGCTGGGTACCCACCAGGTTACCCCATGCAAGCCTATGTGGATCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000196814.5
CDS-3UTR TCA 90 bp GACACCTGCAGGTTTGAACTGCTCAGGATGGTGGGTCATCACATCAGTAGCACAGAGCTGTTTGATCTCTaGAGGCAGCAGCATCTCTTC +
Preference number: 4 (lower is better)
Translates to: DTCRFELLRMVGHHISSTELFDL*RQQHLF
Trigger: GAAGAGATGCTGCTGCCTTCAGAGATCAAACAGCTC...TGTGCTACTGATGTGATGACCCACCATCCTGAGCAGTTCAAACCTGCAGGTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS-3UTR TCA 90 bp AGAGCTCACTTTTGCAGCTTACAGCTGACACCTGCAGGTTTGAACTGCTCAGGAGTCAAAGGGGAGTGGTaGTGTCATCCCCAAGTTCTG +
Preference number: 4 (lower is better)
Translates to: RAHFCSLQLTPAGLNCSGVKGEW*CHPQVL
Trigger: CAGAACTTGGGGATGACATCACCACTCCCCTTTGAC...TCCTGAGCAGTTCAAACCTGCAGGTGTCAGCTGTAAGCTGCAAAAGTGAGCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS-3UTR TCA 90 bp CAGCTGACACCTGCAGGTTTGAACTGCTCAGGATGGTGGGTCATCACATCAGTAACCACTCCTTGTGGGTaGGCTGTGAAAATCTGCTGT +
Preference number: 4 (lower is better)
Translates to: QLTPAGLNCSGWWVITSVTTPCG*AVKICC
Trigger: ACAGCAGATTTTCACAGCTCACCCACAAGGAGTGGT...TACTGATGTGATGACCCACCATCCTGAGCAGTTCAAACCTGCAGGTGTCAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS-3UTR GCA 90 bp AGCTCACTTTTGCAGCTTACAGCTGACACCTGCAGGTTTGAACTGCTCAGGATGTGCTGCTGTTGTACTTaGAGCCAGCTGTGGCCTAGA +
Preference number: 4 (lower is better)
Translates to: SSLLQLTADTCRFELLRMCCCCT*SQLWPR
Trigger: TCTAGGCCACAGCTGGCTGCAAGTACAACAGCAGCA...CATCCTGAGCAGTTCAAACCTGCAGGTGTCAGCTGTAAGCTGCAAAAGTGAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000153838.8
CDS-3UTR GCA 90 bp AGCTCACTTTTGCAGCTTACAGCTGACACCTGCAGGTTTGAACTGCTCAGGATGAGGAAGGGGAGATGCTaGTGTTGTACTTGCAGCCAG +
Preference number: 4 (lower is better)
Translates to: SSLLQLTADTCRFELLRMRKGRC*CCTCSQ
Trigger: CTGGCTGCAAGTACAACAGCAGCATCTCCCCTTCCT...CATCCTGAGCAGTTCAAACCTGCAGGTGTCAGCTGTAAGCTGCAAAAGTGAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000153838.8
CDS-3UTR GCA 90 bp TCACTTTTGCAGCTTACAGCTGACACCTGCAGGTTTGAACTGCTCAGGATGGTGAGGAGGAAGGGGAGATaGTGCTGTTGTACTTGCAGC +
Preference number: 4 (lower is better)
Translates to: SLLQLTADTCRFELLRMVRRKGR*CCCTCS
Trigger: GCTGCAAGTACAACAGCAGCATCTCCCCTTCCTCCT...CACCATCCTGAGCAGTTCAAACCTGCAGGTGTCAGCTGTAAGCTGCAAAAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000153838.8
CDS-3UTR GCA 90 bp TGGGTCTGTGCGCTGACAGCACCGCCAAGGGGGAGACCCAGATTTGAGAATGGGGGTTTCTTGGAATACTaGTATCATCAGACTCTGTAT +
Preference number: 4 (lower is better)
Translates to: WVCALTAPPRGRPRFENGGFLEY*YHQTLY
Trigger: ATACAGAGTCTGATGATAGCAGTATTCCAAGAAACC...CCCATTCTCAAATCTGGGTCTCCCCCTTGGCGGTGCTGTCAGCGCACAGACCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS-3UTR GCA 90 bp AGGTTTGAACTGCTCAGGATGGTGGGTCATCACATCAGTAGCACAGCCTTGGCCAGCTCTTCTGATGAGTaGAAGCCATCCATTCGGGAA +
Preference number: 4 (lower is better)
Translates to: RFELLRMVGHHISSTALASSSDE*KPSIRE
Trigger: TTCCCGAATGGATGGCTTGCACTCATCAGAAGAGCT...GGCCAAGGCTGTGCTACTGATGTGATGACCCACCATCCTGAGCAGTTCAAACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS-3UTR GCA 90 bp CGCTCATATGCAGAAGAGGGTGGTGACAGAGAGCCCCGTCGTTTCCTTTTCTCTGGTGTACACTCACACTaGATTCGCTTAATATCCCGG +
Preference number: 4 (lower is better)
Translates to: RSYAEEGGDREPRRFLFSGVHSH*IRLISR
Trigger: CCGGGATATTAAGCGAATGCAGTGTGAGTGTACACC...AGAGAAAAGGAAACGACGGGGCTCTCTGTCACCACCCTCTTCTGCATATGAGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000196814.5
CDS-3UTR GCA 90 bp GCTGGCATCATCTCCTGGGCTTTCCCAAGTAGGAGGATCCCACTGAGTCTGTCTGCAATCTTCTCCACATaGTACTTCACCTTGAGCTCT +
Preference number: 4 (lower is better)
Translates to: AGIISWAFPSRRIPLSLSAIFST*YFTLSS
Trigger: AGAGCTCAAGGTGAAGTAGCATGTGGAGAAGATTGC...AGACAGACTCAGTGGGATCCTCCTACTTGGGAAAGCCCAGGAGATGATGCCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000196814.5
CDS-3UTR GCA 90 bp TCACTTTTGCAGCTTACAGCTGACACCTGCAGGTTTGAACTGCTCAGGATGGTGCTCACTGGAGGTGTCTaGTTCTGCTGTCTTGGGCTT +
Preference number: 4 (lower is better)
Translates to: SLLQLTADTCRFELLRMVLTGGV*FCCLGL
Trigger: AAGCCCAAGACAGCAGAAGCAGACACCTCCAGTGAG...CACCATCCTGAGCAGTTCAAACCTGCAGGTGTCAGCTGTAAGCTGCAAAAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS-3UTR GCA 90 bp GGGCAGAAGCCACAGGATTCATCCTTTCCGCTCATACTCCACTCTGGCCTGAGGACAGCCCCAAACTTCTaGATGTACTTCTTGATGTAC +
Preference number: 4 (lower is better)
Translates to: GQKPQDSSFPLILHSGLRTAPNF*MYFLMY
Trigger: GTACATCAAGAAGTACATGCAGAAGTTTGGGGCTGT...CCTCAGGCCAGAGTGGAGTATGAGCGGAAAGGATGAATCCTGTGGCTTCTGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS-3UTR CCA 90 bp GGGCAGAAGCCACAGGATTCATCCTTTCCGCTCATACTCCACTCTGGCCTGAGGTTCCACTCTCGATTTTaGTGGCGAAGATTCTTCTGT +
Preference number: 4 (lower is better)
Translates to: GQKPQDSSFPLILHSGLRFHSRF*WRRFFC
Trigger: ACAGAAGAATCTTCGCCACCAAAATCGAGAGTGGAA...CCTCAGGCCAGAGTGGAGTATGAGCGGAAAGGATGAATCCTGTGGCTTCTGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000153838.8
CDS-3UTR CCA 90 bp GCTGGCATCATCTCCTGGGCTTTCCCAAGTAGGAGGATCCCACTGAGTCTGTCTCCTGTTATCAGTATATaGCCGAGAATAGCGTGTCCT +
Preference number: 4 (lower is better)
Translates to: AGIISWAFPSRRIPLSLSPVISI*PRIACP
Trigger: AGGACACGCTATTCTCGGCCATATACTGATAACAGG...AGACAGACTCAGTGGGATCCTCCTACTTGGGAAAGCCCAGGAGATGATGCCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000196814.5
CDS-3UTR CCA 90 bp CCGTGGGGTAGGGCAGAAGCCACAGGATTCATCCTTTCCGCTCATACTCCACTCTACTGTTATCATGCTTaGAATATGATGACCCCCGTC +
Preference number: 4 (lower is better)
Translates to: PWGRAEATGFILSAHTPLYCYHA*NMMTPV
Trigger: GACGGGGGTCATCATATTCCAAGCATGATAACAGTA...GAGTGGAGTATGAGCGGAAAGGATGAATCCTGTGGCTTCTGCCCTACCCCACGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS-3UTR CCA 90 bp TTTCACATTCTCATTGCACTCCAGGTCCTCGGGGTTCTTACAGTACTTCAGCTCGTGGGCCTTTCCTGTTaGGAAAAGTCCCACCCTAGG +
Preference number: 4 (lower is better)
Translates to: FHILIALQVLGVLTVLQLVGLSC*EKSHPR
Trigger: CCTAGGGTGGGACTTTTCCCAACAGGAAAGGCCCAC...GAGCTGAAGTACTGTAAGAACCCCGAGGACCTGGAGTGCAATGAGAATGTGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000196814.5
CDS-3UTR CCA 90 bp CTACTGCCTCTGATGGCCTGTAACTGTTACACCAACAGCTCACAACTAGGGGTCATCAGTTCTGAGTGCTaGGGCACAGATGATTCTCCC +
Preference number: 4 (lower is better)
Translates to: LLPLMACNCYTNSSQLGVISSEC*GTDDSP
Trigger: GGGAGAATCATCTGTGCCCCAGCACTCAGAACTGAT...GACCCCTAGTTGTGAGCTGTTGGTGTAACAGTTACAGGCCATCAGAGGCAGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS-3UTR CCA 90 bp CTTACAGCTGACACCTGCAGGTTTGAACTGCTCAGGATGGTGGGTCATCACATCTTCTTTCCACCGCTGTaGGTCCCTGAAGTCATCCAT +
Preference number: 4 (lower is better)
Translates to: LTADTCRFELLRMVGHHIFFPPL*VPEVIH
Trigger: ATGGATGACTTCAGGGACCCACAGCGGTGGAAAGAA...GATGTGATGACCCACCATCCTGAGCAGTTCAAACCTGCAGGTGTCAGCTGTAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS-3UTR CCA 90 bp AGCTCACTTTTGCAGCTTACAGCTGACACCTGCAGGTTTGAACTGCTCAGGATGTGCCATTGCTGTCTTTaGGCTCTGTCTCCGTGTCTG +
Preference number: 4 (lower is better)
Translates to: SSLLQLTADTCRFELLRMCHCCL*ALSPCL
Trigger: CAGACACGGAGACAGAGCCCAAAGACAGCAATGGCA...CATCCTGAGCAGTTCAAACCTGCAGGTGTCAGCTGTAAGCTGCAAAAGTGAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS-3UTR CCA 90 bp AGAGCTCACTTTTGCAGCTTACAGCTGACACCTGCAGGTTTGAACTGCTCAGGATGCCATTGCTGTCTTTaGGCTCTGTCTCCGTGTCTG +
Preference number: 4 (lower is better)
Translates to: RAHFCSLQLTPAGLNCSGCHCCL*ALSPCL
Trigger: CAGACACGGAGACAGAGCCCAAAGACAGCAATGGCA...TCCTGAGCAGTTCAAACCTGCAGGTGTCAGCTGTAAGCTGCAAAAGTGAGCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS-3UTR CCA 90 bp TGGAATCCGATACACCTCCAAAACAAGGCCGGCGCCAGTGAGTTAACCACCTCTATCCACTGTTTTATCTaGTGGCTCCTGGCTTCTCTC +
Preference number: 4 (lower is better)
Translates to: WNPIHLQNKAGASELTTSIHCFI*WLLASL
Trigger: GAGAGAAGCCAGGAGCCACCAGATAAAACAGTGGAT...AGAGGTGGTTAACTCACTGGCGCCGGCCTTGTTTTGGAGGTGTATCGGATTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000197655.2
CDS-3UTR CCA 90 bp GGGGTAGGGCAGAAGCCACAGGATTCATCCTTTCCGCTCATACTCCACTCTGGCCCTGTTAGGAGTCTTTaGAGCTGTTTGATCTCTGAA +
Preference number: 4 (lower is better)
Translates to: GVGQKPQDSSFPLILHSGPVRSL*SCLISE
Trigger: TTCAGAGATCAAACAGCTCCAAAGACTCCTAACAGG...GCCAGAGTGGAGTATGAGCGGAAAGGATGAATCCTGTGGCTTCTGCCCTACCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS-3UTR CCA 90 bp GCAGGTTTGAACTGCTCAGGATGGTGGGTCATCACATCAGTAGCACAGCCTTGGTTGAGACTGCTTGTCTaGGTCTCTCTCTCTAGACCT +
Preference number: 4 (lower is better)
Translates to: AGLNCSGWWVITSVAQPWLRLLV*VSLSRP
Trigger: AGGTCTAGAGAGAGAGACCCAGACAAGCAGTCTCAA...CCAAGGCTGTGCTACTGATGTGATGACCCACCATCCTGAGCAGTTCAAACCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS-3UTR CCA 90 bp CGTGTGGCCAAGGTCTTCCCTAGGCTACTGCCTCTGATGGCCTGTAACTGTTACACACTGACAGACTGTTaGTTTGACTCCCAGACATTG +
Preference number: 4 (lower is better)
Translates to: RVAKVFPRLLPLMACNCYTLTDC*FDSQTL
Trigger: CAATGTCTGGGAGTCAAACCAACAGTCTGTCAGTGT...GTAACAGTTACAGGCCATCAGAGGCAGTAGCCTAGGGAAGACCTTGGCCACACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS-3UTR CCA 90 bp AGGTTTGAACTGCTCAGGATGGTGGGTCATCACATCAGTAGCACAGCCTTGGCCTACCACCACTCCTTGTaGGTGAGCTGTGAAAATCTG +
Preference number: 4 (lower is better)
Translates to: RFELLRMVGHHISSTALAYHHSL*VSCENL
Trigger: CAGATTTTCACAGCTCACCCACAAGGAGTGGTGGTA...GGCCAAGGCTGTGCTACTGATGTGATGACCCACCATCCTGAGCAGTTCAAACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS-3UTR CCA 90 bp CTACTGCCTCTGATGGCCTGTAACTGTTACACCAACAGCTCACAACTAGGGGTCCTTCATGCTCAAGGCTaGCATCATCTCCTGGGCTTT +
Preference number: 4 (lower is better)
Translates to: LLPLMACNCYTNSSQLGVLHAQG*HHLLGF
Trigger: AAAGCCCAGGAGATGATGCCAGCCTTGAGCATGAAG...GACCCCTAGTTGTGAGCTGTTGGTGTAACAGTTACAGGCCATCAGAGGCAGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
3UTR CAA 72 bp AACTTACTGACTTCAATAGTGGCTTCACTCTCAACTTaGGACTCGCACAGCTGCTGTGGGAGGAGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: NLLTSIVASLST*DSHSCCGRSCW
Trigger: CCAGCAGCTCCTCCCACAGCAGCTGTGCGAGTCCAAAGTTGAGAGTGAAGCCACTATTGAAGTCAGTAAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000196814.5
CDS-3UTR TCA 90 bp CAGCTGACACCTGCAGGTTTGAACTGCTCAGGATGGTGGGTCATCACATCAGTAAAAACTGAAGCTGAATaGCACCTTTTGCCGTCCCTG +
Preference number: 4 (lower is better)
Translates to: QLTPAGLNCSGWWVITSVKTEAE*HLLPSL
Trigger: CAGGGACGGCAAAAGGTGTCATTCAGCTTCAGTTTT...TACTGATGTGATGACCCACCATCCTGAGCAGTTCAAACCTGCAGGTGTCAGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000153838.8
CDS-3UTR TCA 90 bp CGTGTGGCCAAGGTCTTCCCTAGGCTACTGCCTCTGATGGCCTGTAACTGTTACATCTTCATCAGACTCTaGACCAAGAAATGTGCCTTC +
Preference number: 4 (lower is better)
Translates to: RVAKVFPRLLPLMACNCYIFIRL*TKKCAF
Trigger: GAAGGCACATTTCTTGGTTCAGAGTCTGATGAAGAT...GTAACAGTTACAGGCCATCAGAGGCAGTAGCCTAGGGAAGACCTTGGCCACACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS-3UTR TCA 90 bp CTGTTACACCAACAGCTCACAACTAGGGGTCATTTGGAGACAGAGCTCACTTTTCTCATCTTCAGAGTCTaGGCTCTCCCGTGCCCTGTT +
Preference number: 4 (lower is better)
Translates to: LLHQQLTTRGHLETELTFLIFRV*ALPCPV
Trigger: AACAGGGCACGGGAGAGCTCAGACTCTGAAGATGAG...AAAAGTGAGCTCTGTCTCCAAATGACCCCTAGTTGTGAGCTGTTGGTGTAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS-3UTR TCA 90 bp GGGGTAGGGCAGAAGCCACAGGATTCATCCTTTCCGCTCATACTCCACTCTGGCCCATCAAAATGGTTATaGGAAGCTGAACTAGTGCTA +
Preference number: 4 (lower is better)
Translates to: GVGQKPQDSSFPLILHSGPSKWL*EAELVL
Trigger: TAGCACTAGTTCAGCTTCTCATAACCATTTTGATGG...GCCAGAGTGGAGTATGAGCGGAAAGGATGAATCCTGTGGCTTCTGCCCTACCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS-3UTR TCA 90 bp GGGCAGAAGCCACAGGATTCATCCTTTCCGCTCATACTCCACTCTGGCCTGAGGCCATCAAAATGGTTATaGGAAGCTGAACTAGTGCTA +
Preference number: 4 (lower is better)
Translates to: GQKPQDSSFPLILHSGLRPSKWL*EAELVL
Trigger: TAGCACTAGTTCAGCTTCTCATAACCATTTTGATGG...CCTCAGGCCAGAGTGGAGTATGAGCGGAAAGGATGAATCCTGTGGCTTCTGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS-3UTR TCA 90 bp CACTTTTGCAGCTTACAGCTGACACCTGCAGGTTTGAACTGCTCAGGATGGTGGTTCACATCTTATTCCTaGCGGAGGACTCTGGAGAGA +
Preference number: 4 (lower is better)
Translates to: HFCSLQLTPAGLNCSGWWFTSYS*RRTLER
Trigger: TCTCTCCAGAGTCCTCCGTCAGGAATAAGATGTGAA...CCACCATCCTGAGCAGTTCAAACCTGCAGGTGTCAGCTGTAAGCTGCAAAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS-3UTR TCA 90 bp AGCTCACTTTTGCAGCTTACAGCTGACACCTGCAGGTTTGAACTGCTCAGGATGGCAATGTCAGGCAGGTaGTTATCTGCTTTCCTGCCA +
Preference number: 4 (lower is better)
Translates to: SSLLQLTADTCRFELLRMAMSGR*LSAFLP
Trigger: TGGCAGGAAAGCAGATAATCACCTGCCTGACATTGC...CATCCTGAGCAGTTCAAACCTGCAGGTGTCAGCTGTAAGCTGCAAAAGTGAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS-3UTR TCA 90 bp AGAGCTCACTTTTGCAGCTTACAGCTGACACCTGCAGGTTTGAACTGCTCAGGAGCAATGTCAGGCAGGTaGTTATCTGCTTTCCTGCCA +
Preference number: 4 (lower is better)
Translates to: RAHFCSLQLTPAGLNCSGAMSGR*LSAFLP
Trigger: TGGCAGGAAAGCAGATAATCACCTGCCTGACATTGC...TCCTGAGCAGTTCAAACCTGCAGGTGTCAGCTGTAAGCTGCAAAAGTGAGCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS-3UTR TCA 90 bp AGGGCAGAAGCCACAGGATTCATCCTTTCCGCTCATACTCCACTCTGGCCTGAGCACAGCTATGATTCATaGAACGAGAGCAATTCCCTT +
Preference number: 4 (lower is better)
Translates to: RAEATGFILSAHTPLWPEHSYDS*NESNSL
Trigger: AAGGGAATTGCTCTCGTTTCATGAATCATAGCTGTG...CTCAGGCCAGAGTGGAGTATGAGCGGAAAGGATGAATCCTGTGGCTTCTGCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000153838.8
CDS-3UTR TCA 90 bp GCAGGTTTGAACTGCTCAGGATGGTGGGTCATCACATCAGTAGCACAGCCTTGGAACAGTGACAACCCATaGCGTTCCAGAAATGACTTG +
Preference number: 4 (lower is better)
Translates to: AGLNCSGWWVITSVAQPWNSDNP*RSRNDL
Trigger: CAAGTCATTTCTGGAACGTCATGGGTTGTCACTGTT...CCAAGGCTGTGCTACTGATGTGATGACCCACCATCCTGAGCAGTTCAAACCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000153838.8
CDS-3UTR TCA 90 bp CAGCTGACACCTGCAGGTTTGAACTGCTCAGGATGGTGGGTCATCACATCAGTAGTGACAGTCTCTAACTaGTCAAGGTCCTCTTTGCCA +
Preference number: 4 (lower is better)
Translates to: QLTPAGLNCSGWWVITSVVTVSN*SRSSLP
Trigger: TGGCAAAGAGGACCTTGATCAGTTAGAGACTGTCAC...TACTGATGTGATGACCCACCATCCTGAGCAGTTCAAACCTGCAGGTGTCAGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS-3UTR TCA 90 bp TTACAGCTGACACCTGCAGGTTTGAACTGCTCAGGATGGTGGGTCATCACATCAGAGCTGTTTGATCTCTaGAGGCAGCAGCATCTCTTC +
Preference number: 4 (lower is better)
Translates to: LQLTPAGLNCSGWWVITSELFDL*RQQHLF
Trigger: GAAGAGATGCTGCTGCCTTCAGAGATCAAACAGCTC...TGATGTGATGACCCACCATCCTGAGCAGTTCAAACCTGCAGGTGTCAGCTGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS-3UTR TCA 90 bp AGAGCTCACTTTTGCAGCTTACAGCTGACACCTGCAGGTTTGAACTGCTCAGGAGTCTTTGGAGCTGTTTaGTCTCTGAAGGCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: RAHFCSLQLTPAGLNCSGVFGAV*SLKAAA
Trigger: TGCTGCTGCCTTCAGAGATCAAACAGCTCCAAAGAC...TCCTGAGCAGTTCAAACCTGCAGGTGTCAGCTGTAAGCTGCAAAAGTGAGCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS-3UTR TCA 90 bp TTACACCAACAGCTCACAACTAGGGGTCATTTGGAGACAGAGCTCACTTTTGCATGTTGCTGTTGCTTCTaGGCTTCCCTCTGTGCCACC +
Preference number: 4 (lower is better)
Translates to: LHQQLTTRGHLETELTFACCCCF*ASLCAT
Trigger: GGTGGCACAGAGGGAAGCTCAGAAGCAACAGCAACA...TGCAAAAGTGAGCTCTGTCTCCAAATGACCCCTAGTTGTGAGCTGTTGGTGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS-3UTR TCA 90 bp GCAGGTTTGAACTGCTCAGGATGGTGGGTCATCACATCAGTAGCACAGCCTTGGACTGCTGTTGTACACTaGCAGACTGTTGGTTTGACT +
Preference number: 4 (lower is better)
Translates to: AGLNCSGWWVITSVAQPWTAVVH*QTVGLT
Trigger: AGTCAAACCAACAGTCTGTCAGTGTACAACAGCAGT...CCAAGGCTGTGCTACTGATGTGATGACCCACCATCCTGAGCAGTTCAAACCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS-3UTR TCA 90 bp GGGGTAGGGCAGAAGCCACAGGATTCATCCTTTCCGCTCATACTCCACTCTGGCCACACTATAGACAGTTaGACATGTCTGTCCTTGATA +
Preference number: 4 (lower is better)
Translates to: GVGQKPQDSSFPLILHSGHTIDS*TCLSLI
Trigger: TATCAAGGACAGACATGTTCAACTGTCTATAGTGTG...GCCAGAGTGGAGTATGAGCGGAAAGGATGAATCCTGTGGCTTCTGCCCTACCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS-3UTR TCA 90 bp TTACAGCTGACACCTGCAGGTTTGAACTGCTCAGGATGGTGGGTCATCACATCATGGAGGAGTTGTCTGTaGATAAGGCGAGGTCACACT +
Preference number: 4 (lower is better)
Translates to: LQLTPAGLNCSGWWVITSWRSCL*IRRGHT
Trigger: AGTGTGACCTCGCCTTATTCACAGACAACTCCTCCA...TGATGTGATGACCCACCATCCTGAGCAGTTCAAACCTGCAGGTGTCAGCTGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS-3UTR TCA 90 bp CCGTGGGGTAGGGCAGAAGCCACAGGATTCATCCTTTCCGCTCATACTCCACTCCACTGGACAATGAACTaGGACATCTCTTTTCTGAAT +
Preference number: 4 (lower is better)
Translates to: PWGRAEATGFILSAHTPLHWTMN*DISFLN
Trigger: ATTCAGAAAAGAGATGTCTCAGTTCATTGTCCAGTG...GAGTGGAGTATGAGCGGAAAGGATGAATCCTGTGGCTTCTGCCCTACCCCACGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS-3UTR GCA 90 bp GGGGTAGGGCAGAAGCCACAGGATTCATCCTTTCCGCTCATACTCCACTCTGGCAGAAGTACAAAATGTTaGCACATCAGCTTCTGTCTC +
Preference number: 4 (lower is better)
Translates to: GVGQKPQDSSFPLILHSGRSTKC*HISFCL
Trigger: GAGACAGAAGCTGATGTGGCAACATTTTGTACTTCT...GCCAGAGTGGAGTATGAGCGGAAAGGATGAATCCTGTGGCTTCTGCCCTACCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS-3UTR GCA 90 bp CCGTGGGGTAGGGCAGAAGCCACAGGATTCATCCTTTCCGCTCATACTCCACTCAGAAGTACAAAATGTTaGCACATCAGCTTCTGTCTC +
Preference number: 4 (lower is better)
Translates to: PWGRAEATGFILSAHTPLRSTKC*HISFCL
Trigger: GAGACAGAAGCTGATGTGGCAACATTTTGTACTTCT...GAGTGGAGTATGAGCGGAAAGGATGAATCCTGTGGCTTCTGCCCTACCCCACGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS-3UTR GCA 90 bp TTCAGTGGTGGTGATCCTGCCCACCTTGCAGTCAGGTTTCCGGTAAGGATTCAGACAGATGATTCTCCCTaGTCCATCTCCACTCTAACT +
Preference number: 4 (lower is better)
Translates to: FSGGDPAHLAVRFPVRIQTDDSP*SISTLT
Trigger: AGTTAGAGTGGAGATGGAGCAGGGAGAATCATCTGT...CTGAATCCTTACCGGAAACCTGACTGCAAGGTGGGCAGGATCACCACCACTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000196814.5
CDS-3UTR GCA 90 bp CCCGGCCGTCGCCAAGCTCTGCCATCCAGATCCACAACAGTGACAACCCATGACTATGACTTCTACATCTaGATGCTGTTTTCTCTGAAA +
Preference number: 4 (lower is better)
Translates to: PGRRQALPSRSTTVTTHDYDFYI*MLFSLK
Trigger: TTTCAGAGAAAACAGCATGCAGATGTAGAAGTCATA...GTCATGGGTTGTCACTGTTGTGGATCTGGATGGCAGAGCTTGGCGACGGCCGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000196814.5
CDS-3UTR GCA 90 bp GGGCAGAAGCCACAGGATTCATCCTTTCCGCTCATACTCCACTCTGGCCTGAGGACTTCTGAGCTTCTTTaGCATATCTTTGGAACTGGT +
Preference number: 4 (lower is better)
Translates to: GQKPQDSSFPLILHSGLRTSELL*HIFGTG
Trigger: ACCAGTTCCAAAGATATGGCAAAGAAGCTCAGAAGT...CCTCAGGCCAGAGTGGAGTATGAGCGGAAAGGATGAATCCTGTGGCTTCTGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000153838.8
CDS-3UTR GCA 90 bp AGCAGCATCTCTTCCTCGTTCAGCTACTGTGCTCTCCTTTTCAGTTTGACTTTTTGCTGTGGGAGGAGCTaGTGGGACTGCAGCTCTTCA +
Preference number: 4 (lower is better)
Translates to: SSISSSFSYCALLFSLTFCCGRS*WDCSSS
Trigger: TGAAGAGCTGCAGTCCCAGCAGCTCCTCCCACAGCA...AAAAGTCAAACTGAAAAGGAGAGCACAGTAGCTGAACGAGGAAGAGATGCTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000197655.2
CDS-3UTR GCA 90 bp GCAGGTTTGAACTGCTCAGGATGGTGGGTCATCACATCAGTAGCACAGCCTTGGTGTGCAGGAGAATACTaGTGTTGTACACTGACAGAC +
Preference number: 4 (lower is better)
Translates to: AGLNCSGWWVITSVAQPWCAGEY*CCTLTD
Trigger: GTCTGTCAGTGTACAACAGCAGTATTCTCCTGCACA...CCAAGGCTGTGCTACTGATGTGATGACCCACCATCCTGAGCAGTTCAAACCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS-3UTR CCA 90 bp TGGGATCCACATAGGCTTGCATGGGGTAACCTGGTGGGTACCCAGCAAAGGGGTGCTCTGAAGTCCGTTTaGATTCTCTTTCTAGTTTTG +
Preference number: 4 (lower is better)
Translates to: WDPHRLAWGNLVGTQQRGALKSV*ILFLVL
Trigger: CAAAACTAGAAAGAGAATCCAAACGGACTTCAGAGC...ACCCCTTTGCTGGGTACCCACCAGGTTACCCCATGCAAGCCTATGTGGATCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000196814.5
CDS-3UTR CCA 90 bp TTACACCAACAGCTCACAACTAGGGGTCATTTGGAGACAGAGCTCACTTTTGCAGTGGGCCTTTCCTGTTaGGAAAAGTCCCACCCTAGG +
Preference number: 4 (lower is better)
Translates to: LHQQLTTRGHLETELTFAVGLSC*EKSHPR
Trigger: CCTAGGGTGGGACTTTTCCCAACAGGAAAGGCCCAC...TGCAAAAGTGAGCTCTGTCTCCAAATGACCCCTAGTTGTGAGCTGTTGGTGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS-3UTR CCA 90 bp AACAGCTCACAACTAGGGGTCATTTGGAGACAGAGCTCACTTTTGCAGCTTACAAGTAGCCCCGGCAGTTaGCTGACCCACAGAAACACT +
Preference number: 4 (lower is better)
Translates to: NSSQLGVIWRQSSLLQLTSSPGS*LTHRNT
Trigger: AGTGTTTCTGTGGGTCAGCCAACTGCCGGGGCTACT...TGTAAGCTGCAAAAGTGAGCTCTGTCTCCAAATGACCCCTAGTTGTGAGCTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000153838.8
CDS-3UTR CCA 90 bp CACTTTTGCAGCTTACAGCTGACACCTGCAGGTTTGAACTGCTCAGGATGGTGGATCCACTGTTTTATCTaGTGGCTCCTGGCTTCTCTC +
Preference number: 4 (lower is better)
Translates to: HFCSLQLTPAGLNCSGWWIHCFI*WLLASL
Trigger: GAGAGAAGCCAGGAGCCACCAGATAAAACAGTGGAT...CCACCATCCTGAGCAGTTCAAACCTGCAGGTGTCAGCTGTAAGCTGCAAAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS-3UTR CCA 90 bp CACTTTTGCAGCTTACAGCTGACACCTGCAGGTTTGAACTGCTCAGGATGGTGGTTGAGACTGCTTGTCTaGGTCTCTCTCTCTAGACCT +
Preference number: 4 (lower is better)
Translates to: HFCSLQLTPAGLNCSGWWLRLLV*VSLSRP
Trigger: AGGTCTAGAGAGAGAGACCCAGACAAGCAGTCTCAA...CCACCATCCTGAGCAGTTCAAACCTGCAGGTGTCAGCTGTAAGCTGCAAAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS-3UTR CCA 90 bp AGGTTTGAACTGCTCAGGATGGTGGGTCATCACATCAGTAGCACAGCCTTGGCCATCATATCTGTCATCTaGCCTTTTTGTTCCCCGCTC +
Preference number: 4 (lower is better)
Translates to: RFELLRMVGHHISSTALAIISVI*PFCSPL
Trigger: GAGCGGGGAACAAAAAGGCCAGATGACAGATATGAT...GGCCAAGGCTGTGCTACTGATGTGATGACCCACCATCCTGAGCAGTTCAAACCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS-3UTR CCA 90 bp AGGTTTGAACTGCTCAGGATGGTGGGTCATCACATCAGTAGCACAGCCTTGGCCGTTTTCATCATAGGTTaGGGTTCCCAGGTCCATTTC +
Preference number: 4 (lower is better)
Translates to: RFELLRMVGHHISSTALAVFIIG*GSQVHF
Trigger: GAAATGGACCTGGGAACCCCAACCTATGATGAAAAC...GGCCAAGGCTGTGCTACTGATGTGATGACCCACCATCCTGAGCAGTTCAAACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000153838.8
ENSMUST00000197399.2
ENSMUST00000200460.5
3UTR CAA 72 bp TTGCTGTTGCTTCTGAGCTTCCCTCTGTGCCACCTCTaGTTCAAACAACTTCCTGCGCTCCTCTGTAGAAAG +
Preference number: 4 (lower is better)
Translates to: LLLLLSFPLCHL*FKQLPALLCRK
Trigger: CTTTCTACAGAGGAGCGCAGGAAGTTGTTTGAACAAGAGGTGGCACAGAGGGAAGCTCAGAAGCAACAGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000196814.5
ENSMUST00000197655.2
3UTR CAA 72 bp TTGGAGGGGAGGGTGGTGGCAGGTCCAGTAGATTATTaGTTACAACCATTTCAGGTGGCTGTAAGGACTGAG +
Preference number: 4 (lower is better)
Translates to: LEGRVVAGPVDY*LQPFQVAVRTE
Trigger: CTCAGTCCTTACAGCCACCTGAAATGGTTGTAACAAATAATCTACTGGACCTGCCACCACCCTCCCCTCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000196814.5
CDS-3UTR TCA 90 bp GGGGTAGGGCAGAAGCCACAGGATTCATCCTTTCCGCTCATACTCCACTCTGGCGGCCTAGATGTCACATaGAGCAAATGTTTCTTAAAA +
Preference number: 4 (lower is better)
Translates to: GVGQKPQDSSFPLILHSGGLDVT*SKCFLK
Trigger: TTTTAAGAAACATTTGCTTCATGTGACATCTAGGCC...GCCAGAGTGGAGTATGAGCGGAAAGGATGAATCCTGTGGCTTCTGCCCTACCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000153838.8
CDS-3UTR TCA 90 bp TCACTTTTGCAGCTTACAGCTGACACCTGCAGGTTTGAACTGCTCAGGATGGTGCAAAGGGGATACCTCTaGTCCAGTCACACTATCATC +
Preference number: 4 (lower is better)
Translates to: SLLQLTADTCRFELLRMVQRGYL*SSHTII
Trigger: GATGATAGTGTGACTGGATCAGAGGTATCCCCTTTG...CACCATCCTGAGCAGTTCAAACCTGCAGGTGTCAGCTGTAAGCTGCAAAAGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS-3UTR TCA 90 bp AGCTCACTTTTGCAGCTTACAGCTGACACCTGCAGGTTTGAACTGCTCAGGATGAAAGCATGCAAGCCTTaGTCAAAGGGGATACCTCTG +
Preference number: 4 (lower is better)
Translates to: SSLLQLTADTCRFELLRMKACKP*SKGIPL
Trigger: CAGAGGTATCCCCTTTGATCAAGGCTTGCATGCTTT...CATCCTGAGCAGTTCAAACCTGCAGGTGTCAGCTGTAAGCTGCAAAAGTGAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS-3UTR TCA 90 bp CTTACAGCTGACACCTGCAGGTTTGAACTGCTCAGGATGGTGGGTCATCACATCTGTGATCCACTTCGTTaGTCCCAATGTTCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: LTADTCRFELLRMVGHHICDPLR*SQCSSS
Trigger: AGAAGAGGAACATTGGGATCAACGAAGTGGATCACA...GATGTGATGACCCACCATCCTGAGCAGTTCAAACCTGCAGGTGTCAGCTGTAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS-3UTR TCA 90 bp CTGTTACACCAACAGCTCACAACTAGGGGTCATTTGGAGACAGAGCTCACTTTTTTCCGGTGCTTGCACTaGTCCCTTGTCCTTCTGATG +
Preference number: 4 (lower is better)
Translates to: LLHQQLTTRGHLETELTFFRCLH*SLVLLM
Trigger: CATCAGAAGGACAAGGGATCAGTGCAAGCACCGGAA...AAAAGTGAGCTCTGTCTCCAAATGACCCCTAGTTGTGAGCTGTTGGTGTAACAG
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS-3UTR TCA 90 bp GACACCTGCAGGTTTGAACTGCTCAGGATGGTGGGTCATCACATCAGTAGCACAGCATGCTGTTTTCTCTaGAACCGTCTGTTTGAACAG +
Preference number: 4 (lower is better)
Translates to: DTCRFELLRMVGHHISSTACCFL*NRLFEQ
Trigger: CTGTTCAAACAGACGGTTTCAGAGAAAACAGCATGC...TGTGCTACTGATGTGATGACCCACCATCCTGAGCAGTTCAAACCTGCAGGTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS-3UTR TCA 90 bp AGCTTACAGCTGACACCTGCAGGTTTGAACTGCTCAGGATGGTGGGTCATCACACGGTGTGTGAGCACGTaGTGTATTCTCACTAGAATA +
Preference number: 4 (lower is better)
Translates to: SLQLTPAGLNCSGWWVITRCVST*CILTRI
Trigger: TATTCTAGTGAGAATACATCACGTGCTCACACACCG...TGTGATGACCCACCATCCTGAGCAGTTCAAACCTGCAGGTGTCAGCTGTAAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS-3UTR TCA 90 bp CAGCTGACACCTGCAGGTTTGAACTGCTCAGGATGGTGGGTCATCACATCAGTATCAGTCTGCGGAATATaGGTTTCTTGGGAGTATCTG +
Preference number: 4 (lower is better)
Translates to: QLTPAGLNCSGWWVITSVSVCGI*VSWEYL
Trigger: CAGATACTCCCAAGAAACTCATATTCCGCAGACTGA...TACTGATGTGATGACCCACCATCCTGAGCAGTTCAAACCTGCAGGTGTCAGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS-3UTR TCA 90 bp TCACTTTTGCAGCTTACAGCTGACACCTGCAGGTTTGAACTGCTCAGGATGGTGGTGACAGTCTCTAACTaGTCAAGGTCCTCTTTGCCA +
Preference number: 4 (lower is better)
Translates to: SLLQLTADTCRFELLRMVVTVSN*SRSSLP
Trigger: TGGCAAAGAGGACCTTGATCAGTTAGAGACTGTCAC...CACCATCCTGAGCAGTTCAAACCTGCAGGTGTCAGCTGTAAGCTGCAAAAGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS-3UTR TCA 90 bp CAGTTTGACTTTTCTTTGGAATCCGATACACCTCCAAAACAAGGCCGGCGCCAGGTGACAGTCTCTAACTaGTCAAGGTCCTCTTTGCCA +
Preference number: 4 (lower is better)
Translates to: QFDFSLESDTPPKQGRRQVTVSN*SRSSLP
Trigger: TGGCAAAGAGGACCTTGATCAGTTAGAGACTGTCAC...CTGGCGCCGGCCTTGTTTTGGAGGTGTATCGGATTCCAAAGAAAAGTCAAACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000197655.2
CDS-3UTR TCA 90 bp CTGTTACACCAACAGCTCACAACTAGGGGTCATTTGGAGACAGAGCTCACTTTTCTTGTGGGTGAGCTGTaGAAATCTGCTGTCCCTGGA +
Preference number: 4 (lower is better)
Translates to: LLHQQLTTRGHLETELTFLVGEL*KSAVPG
Trigger: TCCAGGGACAGCAGATTTTCACAGCTCACCCACAAG...AAAAGTGAGCTCTGTCTCCAAATGACCCCTAGTTGTGAGCTGTTGGTGTAACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS-3UTR TCA 90 bp AGGGCAGAAGCCACAGGATTCATCCTTTCCGCTCATACTCCACTCTGGCCTGAGCACTGGACAATGAACTaGGACATCTCTTTTCTGAAT +
Preference number: 4 (lower is better)
Translates to: RAEATGFILSAHTPLWPEHWTMN*DISFLN
Trigger: ATTCAGAAAAGAGATGTCTCAGTTCATTGTCCAGTG...CTCAGGCCAGAGTGGAGTATGAGCGGAAAGGATGAATCCTGTGGCTTCTGCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS-3UTR GCA 90 bp TCACTTTTGCAGCTTACAGCTGACACCTGCAGGTTTGAACTGCTCAGGATGGTGCTGAATGACACCTTTTaGCGTCCCTGTTCCTCCAAA +
Preference number: 4 (lower is better)
Translates to: SLLQLTADTCRFELLRMVLNDTF*RPCSSK
Trigger: TTTGGAGGAACAGGGACGGCAAAAGGTGTCATTCAG...CACCATCCTGAGCAGTTCAAACCTGCAGGTGTCAGCTGTAAGCTGCAAAAGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000153838.8
CDS-3UTR GCA 90 bp CTGTTACACCAACAGCTCACAACTAGGGGTCATTTGGAGACAGAGCTCACTTTTCACAGGTTCCATAGCTaGTGTCAGGCTGCTGGTATG +
Preference number: 4 (lower is better)
Translates to: LLHQQLTTRGHLETELTFHRFHS*CQAAGM
Trigger: CATACCAGCAGCCTGACAGCAGCTATGGAACCTGTG...AAAAGTGAGCTCTGTCTCCAAATGACCCCTAGTTGTGAGCTGTTGGTGTAACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS-3UTR GCA 90 bp CAGCTGACACCTGCAGGTTTGAACTGCTCAGGATGGTGGGTCATCACATCAGTAGCAATCTTCTCCACATaGTACTTCACCTTGAGCTCT +
Preference number: 4 (lower is better)
Translates to: QLTPAGLNCSGWWVITSVAIFST*YFTLSS
Trigger: AGAGCTCAAGGTGAAGTAGCATGTGGAGAAGATTGC...TACTGATGTGATGACCCACCATCCTGAGCAGTTCAAACCTGCAGGTGTCAGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS-3UTR GCA 90 bp GACACCTGCAGGTTTGAACTGCTCAGGATGGTGGGTCATCACATCAGTAGCACATTTCATCTTCCCTCCTaGAGCTCTGATACTGACTCT +
Preference number: 4 (lower is better)
Translates to: DTCRFELLRMVGHHISSTFHLPS*SSDTDS
Trigger: AGAGTCAGTATCAGAGCTGCAGGAGGGAAGATGAAA...TGTGCTACTGATGTGATGACCCACCATCCTGAGCAGTTCAAACCTGCAGGTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000153838.8
CDS-3UTR GCA 90 bp AGAGCTCACTTTTGCAGCTTACAGCTGACACCTGCAGGTTTGAACTGCTCAGGAAGTGACGTCCGAGACTaGACTGTCCATGCTATTTTC +
Preference number: 4 (lower is better)
Translates to: RAHFCSLQLTPAGLNCSGSDVRD*TVHAIF
Trigger: GAAAATAGCATGGACAGTGCAGTCTCGGACGTCACT...TCCTGAGCAGTTCAAACCTGCAGGTGTCAGCTGTAAGCTGCAAAAGTGAGCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS-3UTR GCA 90 bp CTACTGCCTCTGATGGCCTGTAACTGTTACACCAACAGCTCACAACTAGGGGTCCTCGTTCAGCTACTGTaGTCTCCTTTTCAGTTTGAC +
Preference number: 4 (lower is better)
Translates to: LLPLMACNCYTNSSQLGVLVQLL*SPFQFD
Trigger: GTCAAACTGAAAAGGAGAGCACAGTAGCTGAACGAG...GACCCCTAGTTGTGAGCTGTTGGTGTAACAGTTACAGGCCATCAGAGGCAGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000153838.8
CDS-3UTR GCA 90 bp AACAGCTCACAACTAGGGGTCATTTGGAGACAGAGCTCACTTTTGCAGCTTACACTCACTGGAGGTGTCTaGTTCTGCTGTCTTGGGCTT +
Preference number: 4 (lower is better)
Translates to: NSSQLGVIWRQSSLLQLTLTGGV*FCCLGL
Trigger: AAGCCCAAGACAGCAGAAGCAGACACCTCCAGTGAG...TGTAAGCTGCAAAAGTGAGCTCTGTCTCCAAATGACCCCTAGTTGTGAGCTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS-3UTR GCA 90 bp CTACTGCCTCTGATGGCCTGTAACTGTTACACCAACAGCTCACAACTAGGGGTCTTCTTTGCTTTTCTTTaGCAGCTCACTGGAGGTGTC +
Preference number: 4 (lower is better)
Translates to: LLPLMACNCYTNSSQLGVFFAFL*QLTGGV
Trigger: GACACCTCCAGTGAGCTGGCAAAGAAAAGCAAAGAA...GACCCCTAGTTGTGAGCTGTTGGTGTAACAGTTACAGGCCATCAGAGGCAGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS-3UTR CCA 90 bp AGGGCAGAAGCCACAGGATTCATCCTTTCCGCTCATACTCCACTCTGGCCTGAGCATGTGATCTTTGACTaGAAGAAGTCCGTACAGAAT +
Preference number: 4 (lower is better)
Translates to: RAEATGFILSAHTPLWPEHVIFD*KKSVQN
Trigger: ATTCTGTACGGACTTCTTCCAGTCAAAGATCACATG...CTCAGGCCAGAGTGGAGTATGAGCGGAAAGGATGAATCCTGTGGCTTCTGCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS-3UTR CCA 90 bp AGCTTACAGCTGACACCTGCAGGTTTGAACTGCTCAGGATGGTGGGTCATCACACCTGTTATCAGTATATaGCCGAGAATAGCGTGTCCT +
Preference number: 4 (lower is better)
Translates to: SLQLTPAGLNCSGWWVITPVISI*PRIACP
Trigger: AGGACACGCTATTCTCGGCCATATACTGATAACAGG...TGTGATGACCCACCATCCTGAGCAGTTCAAACCTGCAGGTGTCAGCTGTAAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS-3UTR CCA 90 bp GCTAGGTGTGGGCAGAAGCACCTTTCCAGCATTAGGGTTGCTGGGATCCACATACTGCCGAGACTTATTTaGGAGATCTTCAAAATCGTC +
Preference number: 4 (lower is better)
Translates to: ARCGQKHLSSIRVAGIHILPRLI*EIFKIV
Trigger: GACGATTTTGAAGATCTCCCAAATAAGTCTCGGCAG...TATGTGGATCCCAGCAACCCTAATGCTGGAAAGGTGCTTCTGCCCACACCTAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000196814.5
CDS-3UTR CCA 90 bp GAACTGGAAACTTCCACAGAGGCTGCCACATGCGGCACCACTGGCACAGATGGGGGAAGAAAAATTTATTaGACGGGCTTGAAAAATGTG +
Preference number: 4 (lower is better)
Translates to: ELETSTEAATCGTTGTDGGRKIY*TGLKNV
Trigger: CACATTTTTCAAGCCCGTCCAATAAATTTTTCTTCC...CCCATCTGTGCCAGTGGTGCCGCATGTGGCAGCCTCTGTGGAAGTTTCCAGTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENSMUST00000196814.5
CDS-3UTR CCA 90 bp CTACTGCCTCTGATGGCCTGTAACTGTTACACCAACAGCTCACAACTAGGGGTCAAGATCAAAGTAACATaGCATCTTCCCCAGCTTGGC +
Preference number: 4 (lower is better)
Translates to: LLPLMACNCYTNSSQLGVKIKVT*HLPQLG
Trigger: GCCAAGCTGGGGAAGATGCCATGTTACTTTGATCTT...GACCCCTAGTTGTGAGCTGTTGGTGTAACAGTTACAGGCCATCAGAGGCAGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS-3UTR CCA 90 bp AGGTTTGAACTGCTCAGGATGGTGGGTCATCACATCAGTAGCACAGCCTTGGCCCCTGTTAGGAGTCTTTaGAGCTGTTTGATCTCTGAA +
Preference number: 4 (lower is better)
Translates to: RFELLRMVGHHISSTALAPVRSL*SCLISE
Trigger: TTCAGAGATCAAACAGCTCCAAAGACTCCTAACAGG...GGCCAAGGCTGTGCTACTGATGTGATGACCCACCATCCTGAGCAGTTCAAACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS-3UTR CCA 90 bp CTACTGCCTCTGATGGCCTGTAACTGTTACACCAACAGCTCACAACTAGGGGTCATCATATCTGTCATCTaGCCTTTTTGTTCCCCGCTC +
Preference number: 4 (lower is better)
Translates to: LLPLMACNCYTNSSQLGVIISVI*PFCSPL
Trigger: GAGCGGGGAACAAAAAGGCCAGATGACAGATATGAT...GACCCCTAGTTGTGAGCTGTTGGTGTAACAGTTACAGGCCATCAGAGGCAGTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS-3UTR CCA 90 bp AGGTTTGAACTGCTCAGGATGGTGGGTCATCACATCAGTAGCACAGCCTTGGCCGCATTACAGGAACATTaGAGTCTTGGTGTACAACAC +
Preference number: 4 (lower is better)
Translates to: RFELLRMVGHHISSTALAALQEH*SLGVQH
Trigger: GTGTTGTACACCAAGACTCCAATGTTCCTGTAATGC...GGCCAAGGCTGTGCTACTGATGTGATGACCCACCATCCTGAGCAGTTCAAACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS-3UTR CCA 90 bp CTACTGCCTCTGATGGCCTGTAACTGTTACACCAACAGCTCACAACTAGGGGTCACACTGACAGACTGTTaGTTTGACTCCCAGACATTG +
Preference number: 4 (lower is better)
Translates to: LLPLMACNCYTNSSQLGVTLTDC*FDSQTL
Trigger: CAATGTCTGGGAGTCAAACCAACAGTCTGTCAGTGT...GACCCCTAGTTGTGAGCTGTTGGTGTAACAGTTACAGGCCATCAGAGGCAGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS-3UTR CCA 90 bp CAGCTGACACCTGCAGGTTTGAACTGCTCAGGATGGTGGGTCATCACATCAGTAGGGCTGTCTTCCAGTTaGGAGGTAAAACAATCGTTT +
Preference number: 4 (lower is better)
Translates to: QLTPAGLNCSGWWVITSVGLSSS*EVKQSF
Trigger: AAACGATTGTTTTACCTCCCAACTGGAAGACAGCCC...TACTGATGTGATGACCCACCATCCTGAGCAGTTCAAACCTGCAGGTGTCAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000153838.8
ENSMUST00000197399.2
ENSMUST00000200460.5
CDS-3UTR CCA 90 bp GACACCTGCAGGTTTGAACTGCTCAGGATGGTGGGTCATCACATCAGTAGCACAGGGCTGTCTTCCAGTTaGGAGGTAAAACAATCGTTT +
Preference number: 4 (lower is better)
Translates to: DTCRFELLRMVGHHISSTGLSSS*EVKQSF
Trigger: AAACGATTGTTTTACCTCCCAACTGGAAGACAGCCC...TGTGCTACTGATGTGATGACCCACCATCCTGAGCAGTTCAAACCTGCAGGTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000153838.8
ENSMUST00000197399.2
ENSMUST00000200460.5
CDS-3UTR CCA 90 bp AGCTTACAGCTGACACCTGCAGGTTTGAACTGCTCAGGATGGTGGGTCATCACAGTTTTCATCATAGGTTaGGGTTCCCAGGTCCATTTC +
Preference number: 4 (lower is better)
Translates to: SLQLTPAGLNCSGWWVITVFIIG*GSQVHF
Trigger: GAAATGGACCTGGGAACCCCAACCTATGATGAAAAC...TGTGATGACCCACCATCCTGAGCAGTTCAAACCTGCAGGTGTCAGCTGTAAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000153838.8
ENSMUST00000197399.2
ENSMUST00000200460.5
CDS-3UTR CCA 90 bp AACAGCTCACAACTAGGGGTCATTTGGAGACAGAGCTCACTTTTGCAGCTTACATCTTTGCCAGCTCACTaGAGGTGTCTGCTTCTGCTG +
Preference number: 4 (lower is better)
Translates to: NSSQLGVIWRQSSLLQLTSLPAH*RCLLLL
Trigger: CAGCAGAAGCAGACACCTCCAGTGAGCTGGCAAAGA...TGTAAGCTGCAAAAGTGAGCTCTGTCTCCAAATGACCCCTAGTTGTGAGCTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
3UTR CAA 72 bp TCTCTCTCTAGACCTGTTAGGAGTCTTTGGAGCTGTTaGATCTCTGAAGGCAGCAGCATCTCTTCCTCGTTC +
Preference number: 4 (lower is better)
Translates to: SLSRPVRSLWSC*ISEGSSISSSF
Trigger: GAACGAGGAAGAGATGCTGCTGCCTTCAGAGATCAAACAGCTCCAAAGACTCCTAACAGGTCTAGAGAGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000196814.5
ENSMUST00000197655.2
3UTR CAA 72 bp GACATTGTAATTCTGTCCTTGGACTGGGCCTGGAGCTaGTACTGGCATTACAGGAACATTGGAGTCTTGGTG +
Preference number: 4 (lower is better)
Translates to: DIVILSLDWAWS*YWHYRNIGVLV
Trigger: CACCAAGACTCCAATGTTCCTGTAATGCCAGTACAAGCTCCAGGCCCAGTCCAAGGACAGAATTACAATGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000196814.5
3UTR CAA 72 bp GACTTGGCTGGGCATAACTCTGCACAATTGGAGGAGTaGTCTGTGAATAAGGCGAGGTCACACTATAGACAG +
Preference number: 4 (lower is better)
Translates to: DLAGHNSAQLEE*SVNKARSHYRQ
Trigger: CTGTCTATAGTGTGACCTCGCCTTATTCACAGACAACTCCTCCAATTGTGCAGAGTTATGCCCAGCCAAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000196814.5
CDS-3UTR TCA 90 bp CTGTTACACCAACAGCTCACAACTAGGGGTCATTTGGAGACAGAGCTCACTTTTACTGGTGATTCTTTCTaGGCTCTCACGGCTACGTCT +
Preference number: 4 (lower is better)
Translates to: LLHQQLTTRGHLETELTFTGDSF*ALTATS
Trigger: AGACGTAGCCGTGAGAGCTCAGAAAGAATCACCAGT...AAAAGTGAGCTCTGTCTCCAAATGACCCCTAGTTGTGAGCTGTTGGTGTAACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000153838.8
CDS-3UTR TCA 90 bp AGGTTTGAACTGCTCAGGATGGTGGGTCATCACATCAGTAGCACAGCCTTGGCCAAATCATGTGATCTTTaGCTGGAAGAAGTCCGTACA +
Preference number: 4 (lower is better)
Translates to: RFELLRMVGHHISSTALAKSCDL*LEEVRT
Trigger: TGTACGGACTTCTTCCAGTCAAAGATCACATGATTT...GGCCAAGGCTGTGCTACTGATGTGATGACCCACCATCCTGAGCAGTTCAAACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS-3UTR TCA 90 bp AACAGCTCACAACTAGGGGTCATTTGGAGACAGAGCTCACTTTTGCAGCTTACAGATCTCGAGTCTGTCTaGCTTGTACTATCAACCCCG +
Preference number: 4 (lower is better)
Translates to: NSSQLGVIWRQSSLLQLTDLESV*LVLSTP
Trigger: CGGGGTTGATAGTACAAGTCAGACAGACTCGAGATC...TGTAAGCTGCAAAAGTGAGCTCTGTCTCCAAATGACCCCTAGTTGTGAGCTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS-3UTR TCA 90 bp CGTGTGGCCAAGGTCTTCCCTAGGCTACTGCCTCTGATGGCCTGTAACTGTTACTGTTCAGTACTTTGTTaGTACTTATGTGTACCACAG +
Preference number: 4 (lower is better)
Translates to: RVAKVFPRLLPLMACNCYCSVLC*YLCVPQ
Trigger: CTGTGGTACACATAAGTATCAACAAAGTACTGAACA...GTAACAGTTACAGGCCATCAGAGGCAGTAGCCTAGGGAAGACCTTGGCCACACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS-3UTR TCA 90 bp AGCTTACAGCTGACACCTGCAGGTTTGAACTGCTCAGGATGGTGGGTCATCACACCACAGAAACACTTCTaGGCTTCTTTGCCATATCTT +
Preference number: 4 (lower is better)
Translates to: SLQLTPAGLNCSGWWVITPQKHF*ASLPYL
Trigger: AAGATATGGCAAAGAAGCTCAGAAGTGTTTCTGTGG...TGTGATGACCCACCATCCTGAGCAGTTCAAACCTGCAGGTGTCAGCTGTAAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000153838.8
CDS-3UTR TCA 90 bp CTTACAGCTGACACCTGCAGGTTTGAACTGCTCAGGATGGTGGGTCATCACATCTCTCCTTCACTTAACTaGGGAACAGCAGTCTTAGTT +
Preference number: 4 (lower is better)
Translates to: LTADTCRFELLRMVGHHISPSLN*GTAVLV
Trigger: AACTAAGACTGCTGTTCCTCAGTTAAGTGAAGGAGA...GATGTGATGACCCACCATCCTGAGCAGTTCAAACCTGCAGGTGTCAGCTGTAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS-3UTR TCA 90 bp CACTTTTGCAGCTTACAGCTGACACCTGCAGGTTTGAACTGCTCAGGATGGTGGGACAGACTGTTGGTTTaGCTCCCAGACATTGTAATT +
Preference number: 4 (lower is better)
Translates to: HFCSLQLTPAGLNCSGWWDRLLV*LPDIVI
Trigger: AATTACAATGTCTGGGAGTCAAACCAACAGTCTGTC...CCACCATCCTGAGCAGTTCAAACCTGCAGGTGTCAGCTGTAAGCTGCAAAAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS-3UTR TCA 90 bp GCAGGTTTGAACTGCTCAGGATGGTGGGTCATCACATCAGTAGCACAGCCTTGGTCTGCATGTACTTCTTaGTGTACTCCTTGGTTTTGT +
Preference number: 4 (lower is better)
Translates to: AGLNCSGWWVITSVAQPWSACTS*CTPWFC
Trigger: ACAAAACCAAGGAGTACATCAAGAAGTACATGCAGA...CCAAGGCTGTGCTACTGATGTGATGACCCACCATCCTGAGCAGTTCAAACCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS-3UTR GCA 90 bp CTGGCCTTTTTGTTCCCCGCTCATATGCAGAAGAGGGTGGTGACAGAGAGCCCCCTGAACCAAGAAATGTaGCTTCAAATTGTGAAGATT +
Preference number: 4 (lower is better)
Translates to: LAFLFPAHMQKRVVTESPLNQEM*LQIVKI
Trigger: AATCTTCACAATTTGAAGGCACATTTCTTGGTTCAG...GGGGCTCTCTGTCACCACCCTCTTCTGCATATGAGCGGGGAACAAAAAGGCCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000196814.5
CDS-3UTR GCA 90 bp TGTTTCACATTCTCATTGCACTCCAGGTCCTCGGGGTTCTTACAGTACTTCAGCAGCTCTTCTGATGAGTaGAAGCCATCCATTCGGGAA +
Preference number: 4 (lower is better)
Translates to: CFTFSLHSRSSGFLQYFSSSSDE*KPSIRE
Trigger: TTCCCGAATGGATGGCTTGCACTCATCAGAAGAGCT...GCTGAAGTACTGTAAGAACCCCGAGGACCTGGAGTGCAATGAGAATGTGAAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000196814.5
CDS-3UTR GCA 90 bp AGAGCTCACTTTTGCAGCTTACAGCTGACACCTGCAGGTTTGAACTGCTCAGGAACAGATGATTCTCCCTaGTCCATCTCCACTCTAACT +
Preference number: 4 (lower is better)
Translates to: RAHFCSLQLTPAGLNCSGTDDSP*SISTLT
Trigger: AGTTAGAGTGGAGATGGAGCAGGGAGAATCATCTGT...TCCTGAGCAGTTCAAACCTGCAGGTGTCAGCTGTAAGCTGCAAAAGTGAGCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS-3UTR GCA 90 bp GACACCTGCAGGTTTGAACTGCTCAGGATGGTGGGTCATCACATCAGTAGCACAGGTTGTTTGAGATTGTaGAGGAGAATACTGCTGTTG +
Preference number: 4 (lower is better)
Translates to: DTCRFELLRMVGHHISSTGCLRL*RRILLL
Trigger: CAACAGCAGTATTCTCCTGCACAATCTCAAACAACC...TGTGCTACTGATGTGATGACCCACCATCCTGAGCAGTTCAAACCTGCAGGTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS-3UTR GCA 90 bp AGCTCACTTTTGCAGCTTACAGCTGACACCTGCAGGTTTGAACTGCTCAGGATGTCCATTTCAGCTTCATaGTCAAGGCTGGCATCATCT +
Preference number: 4 (lower is better)
Translates to: SSLLQLTADTCRFELLRMSISAS*SRLASS
Trigger: AGATGATGCCAGCCTTGAGCATGAAGCTGAAATGGA...CATCCTGAGCAGTTCAAACCTGCAGGTGTCAGCTGTAAGCTGCAAAAGTGAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000153838.8
ENSMUST00000197399.2
ENSMUST00000200460.5
CDS-3UTR GCA 90 bp AGAGCTCACTTTTGCAGCTTACAGCTGACACCTGCAGGTTTGAACTGCTCAGGATTCTTTGCTTTTCTTTaGCAGCTCACTGGAGGTGTC +
Preference number: 4 (lower is better)
Translates to: RAHFCSLQLTPAGLNCSGFFAFL*QLTGGV
Trigger: GACACCTCCAGTGAGCTGGCAAAGAAAAGCAAAGAA...TCCTGAGCAGTTCAAACCTGCAGGTGTCAGCTGTAAGCTGCAAAAGTGAGCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS-3UTR CCA 90 bp CACTTTTGCAGCTTACAGCTGACACCTGCAGGTTTGAACTGCTCAGGATGGTGGCTGGAGTCGGTTTCTTaGAATACTGCTATCATCAGA +
Preference number: 4 (lower is better)
Translates to: HFCSLQLTPAGLNCSGWWLESVS*NTAIIR
Trigger: TCTGATGATAGCAGTATTCCAAGAAACCGACTCCAG...CCACCATCCTGAGCAGTTCAAACCTGCAGGTGTCAGCTGTAAGCTGCAAAAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS-3UTR CCA 90 bp GCAGGTTTGAACTGCTCAGGATGGTGGGTCATCACATCAGTAGCACAGCCTTGGCAAAGTAGAATTCTTTaGCACAACCACAACAGACTG +
Preference number: 4 (lower is better)
Translates to: AGLNCSGWWVITSVAQPWQSRIL*HNHNRL
Trigger: CAGTCTGTTGTGGTTGTGCCAAAGAATTCTACTTTG...CCAAGGCTGTGCTACTGATGTGATGACCCACCATCCTGAGCAGTTCAAACCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS-3UTR CCA 90 bp TTACAGCTGACACCTGCAGGTTTGAACTGCTCAGGATGGTGGGTCATCACATCACATATGCATGTCTCCTaGTCTCTAATCCATCTTCCC +
Preference number: 4 (lower is better)
Translates to: LQLTPAGLNCSGWWVITSHMHVS*SLIHLP
Trigger: GGGAAGATGGATTAGAGACCAGGAGACATGCATATG...TGATGTGATGACCCACCATCCTGAGCAGTTCAAACCTGCAGGTGTCAGCTGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS-3UTR CCA 90 bp CAGCTGACACCTGCAGGTTTGAACTGCTCAGGATGGTGGGTCATCACATCAGTACTGCCGAGACTTATTTaGGAGATCTTCAAAATCGTC +
Preference number: 4 (lower is better)
Translates to: QLTPAGLNCSGWWVITSVLPRLI*EIFKIV
Trigger: GACGATTTTGAAGATCTCCCAAATAAGTCTCGGCAG...TACTGATGTGATGACCCACCATCCTGAGCAGTTCAAACCTGCAGGTGTCAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS-3UTR CCA 90 bp TGGTTTTGTGTTTCACATTCTCATTGCACTCCAGGTCCTCGGGGTTCTTACAGTTTCTTTCCACCGCTGTaGGTCCCTGAAGTCATCCAT +
Preference number: 4 (lower is better)
Translates to: WFCVSHSHCTPGPRGSYSFFPPL*VPEVIH
Trigger: ATGGATGACTTCAGGGACCCACAGCGGTGGAAAGAA...ACTGTAAGAACCCCGAGGACCTGGAGTGCAATGAGAATGTGAAACACAAAACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000196814.5
CDS-3UTR CCA 90 bp AGGGCAGAAGCCACAGGATTCATCCTTTCCGCTCATACTCCACTCTGGCCTGAGAGTTTGACTTTTCTTTaGAATCCGATACACCTCCTT +
Preference number: 4 (lower is better)
Translates to: RAEATGFILSAHTPLWPESLTFL*NPIHLL
Trigger: AAGGAGGTGTATCGGATTCCAAAGAAAAGTCAAACT...CTCAGGCCAGAGTGGAGTATGAGCGGAAAGGATGAATCCTGTGGCTTCTGCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS-3UTR CCA 90 bp AAACCACAAGGCAGCCTGCGTTGGGATATTTACATGATAACAAATCCAACCTTGCCACATAGGCTTGCATaGGGTAACCTGGTGGGTACC +
Preference number: 4 (lower is better)
Translates to: KPQGSLRWDIYMITNPTLPHRLA*GNLVGT
Trigger: GGTACCCACCAGGTTACCCCATGCAAGCCTATGTGG...CAAGGTTGGATTTGTTATCATGTAAATATCCCAACGCAGGCTGCCTTGTGGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS-3UTR TCA 90 bp CTCACTTTCAACATCAGACACTCCCTCTTCTTCATCTTGGGATGGTGTTTCCTCAAAGCATGCAAGCCTTaGTCAAAGGGGATACCTCTG +
Preference number: 4 (lower is better)
Translates to: LTFNIRHSLFFILGWCFLKACKP*SKGIPL
Trigger: CAGAGGTATCCCCTTTGATCAAGGCTTGCATGCTTT...GAGGAAACACCATCCCAAGATGAAGAAGAGGGAGTGTCTGATGTTGAAAGTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000196814.5
CDS-3UTR TCA 90 bp AAACCACAAGGCAGCCTGCGTTGGGATATTTACATGATAACAAATCCAACCTTGCCCACCCTAGGTTTCTaGGCTCTTCTGATGAGTGCA +
Preference number: 4 (lower is better)
Translates to: KPQGSLRWDIYMITNPTLPTLGF*ALLMSA
Trigger: TGCACTCATCAGAAGAGCTCAGAAACCTAGGGTGGG...CAAGGTTGGATTTGTTATCATGTAAATATCCCAACGCAGGCTGCCTTGTGGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS-3UTR TCA 90 bp GCTAGGTGTGGGCAGAAGCACCTTTCCAGCATTAGGGTTGCTGGGATCCACATATGTTCAGTACTTTGTTaGTACTTATGTGTACCACAG +
Preference number: 4 (lower is better)
Translates to: ARCGQKHLSSIRVAGIHICSVLC*YLCVPQ
Trigger: CTGTGGTACACATAAGTATCAACAAAGTACTGAACA...TATGTGGATCCCAGCAACCCTAATGCTGGAAAGGTGCTTCTGCCCACACCTAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000196814.5
CDS-3UTR TCA 90 bp AGCTCACTTTTGCAGCTTACAGCTGACACCTGCAGGTTTGAACTGCTCAGGATGCTGAAACCGTCTGTTTaGACAGTAATCTCCATTTGG +
Preference number: 4 (lower is better)
Translates to: SSLLQLTADTCRFELLRMLKPSV*TVISIW
Trigger: CCAAATGGAGATTACTGTTCAAACAGACGGTTTCAG...CATCCTGAGCAGTTCAAACCTGCAGGTGTCAGCTGTAAGCTGCAAAAGTGAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS-3UTR TCA 90 bp CAGCTGACACCTGCAGGTTTGAACTGCTCAGGATGGTGGGTCATCACATCAGTACACACTATAGACAGTTaGACATGTCTGTCCTTGATA +
Preference number: 4 (lower is better)
Translates to: QLTPAGLNCSGWWVITSVHTIDS*TCLSLI
Trigger: TATCAAGGACAGACATGTTCAACTGTCTATAGTGTG...TACTGATGTGATGACCCACCATCCTGAGCAGTTCAAACCTGCAGGTGTCAGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS-3UTR TCA 90 bp AAACCACAAGGCAGCCTGCGTTGGGATATTTACATGATAACAAATCCAACCTTGAATCTTCAGTGGTGGTaGTCCTGCCCACCTTGCAGT +
Preference number: 4 (lower is better)
Translates to: KPQGSLRWDIYMITNPTLNLQWW*SCPPCS
Trigger: ACTGCAAGGTGGGCAGGATCACCACCACTGAAGATT...CAAGGTTGGATTTGTTATCATGTAAATATCCCAACGCAGGCTGCCTTGTGGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS-3UTR TCA 90 bp GACACCTGCAGGTTTGAACTGCTCAGGATGGTGGGTCATCACATCAGTAGCACATCTGCATGTACTTCTTaGTGTACTCCTTGGTTTTGT +
Preference number: 4 (lower is better)
Translates to: DTCRFELLRMVGHHISSTSACTS*CTPWFC
Trigger: ACAAAACCAAGGAGTACATCAAGAAGTACATGCAGA...TGTGCTACTGATGTGATGACCCACCATCCTGAGCAGTTCAAACCTGCAGGTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS-3UTR GCA 90 bp GCAGGTTTGAACTGCTCAGGATGGTGGGTCATCACATCAGTAGCACAGCCTTGGTTTGGAGAATCACTTTaGTTTTCATTGCTAAGCGCA +
Preference number: 4 (lower is better)
Translates to: AGLNCSGWWVITSVAQPWFGESL*FSLLSA
Trigger: TGCGCTTAGCAATGAAAAGCAAAGTGATTCTCCAAA...CCAAGGCTGTGCTACTGATGTGATGACCCACCATCCTGAGCAGTTCAAACCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000153838.8
CDS-3UTR GCA 90 bp GACACCTGCAGGTTTGAACTGCTCAGGATGGTGGGTCATCACATCAGTAGCACATTGCAGGAGATGATCTaGTTGTTCCTTCAAAGTTTG +
Preference number: 4 (lower is better)
Translates to: DTCRFELLRMVGHHISSTLQEMI*LFLQSL
Trigger: CAAACTTTGAAGGAACAAGCAGATCATCTCCTGCAA...TGTGCTACTGATGTGATGACCCACCATCCTGAGCAGTTCAAACCTGCAGGTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000153838.8
CDS-3UTR GCA 90 bp AGCTCACTTTTGCAGCTTACAGCTGACACCTGCAGGTTTGAACTGCTCAGGATGCTGAGTCCCTTTCTCTaGATCTACCAACATTCTGAA +
Preference number: 4 (lower is better)
Translates to: SSLLQLTADTCRFELLRMLSPFL*IYQHSE
Trigger: TTCAGAATGTTGGTAGATGCAGAGAAAGGGACTCAG...CATCCTGAGCAGTTCAAACCTGCAGGTGTCAGCTGTAAGCTGCAAAAGTGAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS-3UTR GCA 90 bp CTTACAGCTGACACCTGCAGGTTTGAACTGCTCAGGATGGTGGGTCATCACATCGCCTCTTGCAAAGACTaGCCAGATAACACATTATTA +
Preference number: 4 (lower is better)
Translates to: LTADTCRFELLRMVGHHIASCKD*PDNTLL
Trigger: TAATAATGTGTTATCTGGGCAGTCTTTGCAAGAGGC...GATGTGATGACCCACCATCCTGAGCAGTTCAAACCTGCAGGTGTCAGCTGTAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS-3UTR GCA 90 bp GGCAGCCTGCGTTGGGATATTTACATGATAACAAATCCAACCTTGCAGGAGAATCCCATCAGTTCTGAGTaGTGGGGCACAGATGATTCT +
Preference number: 4 (lower is better)
Translates to: GSLRWDIYMITNPTLQENPISSE*WGTDDS
Trigger: AGAATCATCTGTGCCCCAGCACTCAGAACTGATGGG...ATTCTCCTGCAAGGTTGGATTTGTTATCATGTAAATATCCCAACGCAGGCTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS-3UTR GCA 90 bp CTTATTCATAACTCCATGAGTCAGCTTTCGGGCGAGGTGCTTGAAATCTTCAGTCCCATCAGTTCTGAGTaGTGGGGCACAGATGATTCT +
Preference number: 4 (lower is better)
Translates to: LIHNSMSQLSGEVLEIFSPISSE*WGTDDS
Trigger: AGAATCATCTGTGCCCCAGCACTCAGAACTGATGGG...ACTGAAGATTTCAAGCACCTCGCCCGAAAGCTGACTCATGGAGTTATGAATAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000196814.5
CDS-3UTR GCA 90 bp CGTGTGGCCAAGGTCTTCCCTAGGCTACTGCCTCTGATGGCCTGTAACTGTTACTATGACTTCTACATCTaGATGCTGTTTTCTCTGAAA +
Preference number: 4 (lower is better)
Translates to: RVAKVFPRLLPLMACNCYYDFYI*MLFSLK
Trigger: TTTCAGAGAAAACAGCATGCAGATGTAGAAGTCATA...GTAACAGTTACAGGCCATCAGAGGCAGTAGCCTAGGGAAGACCTTGGCCACACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS-3UTR GCA 90 bp TTACAGCTGACACCTGCAGGTTTGAACTGCTCAGGATGGTGGGTCATCACATCAGATGTTTTTGTTCCGTaGATATTCTTTCACCCGAGC +
Preference number: 4 (lower is better)
Translates to: LQLTPAGLNCSGWWVITSDVFVP*IFFHPS
Trigger: GCTCGGGTGAAAGAATATGCACGGAACAAAAACATC...TGATGTGATGACCCACCATCCTGAGCAGTTCAAACCTGCAGGTGTCAGCTGTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000153838.8
CDS-3UTR GCA 90 bp AACAGCTCACAACTAGGGGTCATTTGGAGACAGAGCTCACTTTTGCAGCTTACAAGTGACGTCCGAGACTaGACTGTCCATGCTATTTTC +
Preference number: 4 (lower is better)
Translates to: NSSQLGVIWRQSSLLQLTSDVRD*TVHAIF
Trigger: GAAAATAGCATGGACAGTGCAGTCTCGGACGTCACT...TGTAAGCTGCAAAAGTGAGCTCTGTCTCCAAATGACCCCTAGTTGTGAGCTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS-3UTR GCA 90 bp ACCACAAGGCAGCCTGCGTTGGGATATTTACATGATAACAAATCCAACCTTGCAGTTTCACATTCTCATTaGACTCCAGGTCCTCGGGGT +
Preference number: 4 (lower is better)
Translates to: TTRQPALGYLHDNKSNLAVSHSH*TPGPRG
Trigger: ACCCCGAGGACCTGGAGTGCAATGAGAATGTGAAAC...TGCAAGGTTGGATTTGTTATCATGTAAATATCCCAACGCAGGCTGCCTTGTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS-3UTR GCA 90 bp AGAGCTCACTTTTGCAGCTTACAGCTGACACCTGCAGGTTTGAACTGCTCAGGAACAGCCCCAAACTTCTaGATGTACTTCTTGATGTAC +
Preference number: 4 (lower is better)
Translates to: RAHFCSLQLTPAGLNCSGTAPNF*MYFLMY
Trigger: GTACATCAAGAAGTACATGCAGAAGTTTGGGGCTGT...TCCTGAGCAGTTCAAACCTGCAGGTGTCAGCTGTAAGCTGCAAAAGTGAGCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS-3UTR CCA 90 bp TTACACCAACAGCTCACAACTAGGGGTCATTTGGAGACAGAGCTCACTTTTGCAGGGAGCTGGGGAGTTTaGAGAATCACTTTGCTTTTC +
Preference number: 4 (lower is better)
Translates to: LHQQLTTRGHLETELTFAGSWGV*RITLLF
Trigger: GAAAAGCAAAGTGATTCTCCAAACTCCCCAGCTCCC...TGCAAAAGTGAGCTCTGTCTCCAAATGACCCCTAGTTGTGAGCTGTTGGTGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000153838.8
CDS-3UTR CCA 90 bp TCTAGACCTGTTAGGAGTCTTTGGAGCTGTTTGATCTCTGAAGGCAGCAGCATCAAGATCAAAGTAACATaGCATCTTCCCCAGCTTGGC +
Preference number: 4 (lower is better)
Translates to: SRPVRSLWSCLISEGSSIKIKVT*HLPQLG
Trigger: GCCAAGCTGGGGAAGATGCCATGTTACTTTGATCTT...GATGCTGCTGCCTTCAGAGATCAAACAGCTCCAAAGACTCCTAACAGGTCTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000196814.5
CDS-3UTR CCA 90 bp AGGTTTGAACTGCTCAGGATGGTGGGTCATCACATCAGTAGCACAGCCTTGGCCAGTTTGACTTTTCTTTaGAATCCGATACACCTCCTT +
Preference number: 4 (lower is better)
Translates to: RFELLRMVGHHISSTALASLTFL*NPIHLL
Trigger: AAGGAGGTGTATCGGATTCCAAAGAAAAGTCAAACT...GGCCAAGGCTGTGCTACTGATGTGATGACCCACCATCCTGAGCAGTTCAAACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS-3UTR CCA 90 bp AGGGCAGAAGCCACAGGATTCATCCTTTCCGCTCATACTCCACTCTGGCCTGAGTTTTTGATGTCTTCATaGGGTTTTCATCATAGGTTG +
Preference number: 4 (lower is better)
Translates to: RAEATGFILSAHTPLWPEFLMSS*GFHHRL
Trigger: CAACCTATGATGAAAACCCCATGAAGACATCAAAAA...CTCAGGCCAGAGTGGAGTATGAGCGGAAAGGATGAATCCTGTGGCTTCTGCCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS-3UTR TCA 90 bp AACAGCTCACAACTAGGGGTCATTTGGAGACAGAGCTCACTTTTGCAGCTTACATATCTTAGAGCCATCTaGAACCTCTTCTTCCTTCCC +
Preference number: 4 (lower is better)
Translates to: NSSQLGVIWRQSSLLQLTYLRAI*NLFFLP
Trigger: GGGAAGGAAGAAGAGGTTTCAGATGGCTCTAAGATA...TGTAAGCTGCAAAAGTGAGCTCTGTCTCCAAATGACCCCTAGTTGTGAGCTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS-3UTR TCA 90 bp CTTACAGCTGACACCTGCAGGTTTGAACTGCTCAGGATGGTGGGTCATCACATCGATCCCTTGTCCTTCTaGTGGAAGAAAAATTTATTG +
Preference number: 4 (lower is better)
Translates to: LTADTCRFELLRMVGHHIDPLSF*WKKNLL
Trigger: CAATAAATTTTTCTTCCATCAGAAGGACAAGGGATC...GATGTGATGACCCACCATCCTGAGCAGTTCAAACCTGCAGGTGTCAGCTGTAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS-3UTR TCA 90 bp TCATCTGGCCTTTTTGTTCCCCGCTCATATGCAGAAGAGGGTGGTGACAGAGAGGATCCCTTGTCCTTCTaGTGGAAGAAAAATTTATTG +
Preference number: 4 (lower is better)
Translates to: SSGLFVPRSYAEEGGDREDPLSF*WKKNLL
Trigger: CAATAAATTTTTCTTCCATCAGAAGGACAAGGGATC...CTCTCTGTCACCACCCTCTTCTGCATATGAGCGGGGAACAAAAAGGCCAGATGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000196814.5
CDS-3UTR TCA 90 bp TCACTTTTGCAGCTTACAGCTGACACCTGCAGGTTTGAACTGCTCAGGATGGTGGCTTTAAACTCTTTATaGTCAAGTACCTCTCCACAG +
Preference number: 4 (lower is better)
Translates to: SLLQLTADTCRFELLRMVALNSL*SSTSPQ
Trigger: CTGTGGAGAGGTACTTGATCATAAAGAGTTTAAAGC...CACCATCCTGAGCAGTTCAAACCTGCAGGTGTCAGCTGTAAGCTGCAAAAGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000153838.8
CDS-3UTR TCA 90 bp TCACTTTTGCAGCTTACAGCTGACACCTGCAGGTTTGAACTGCTCAGGATGGTGCATTTTTCAGGGCCATaGAGTAGTAGTGGATGTTTT +
Preference number: 4 (lower is better)
Translates to: SLLQLTADTCRFELLRMVHFSGP*SSSGCF
Trigger: AAAACATCCACTACTACTTCATGGCCCTGAAAAATG...CACCATCCTGAGCAGTTCAAACCTGCAGGTGTCAGCTGTAAGCTGCAAAAGTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000153838.8
CDS-3UTR TCA 90 bp TTACAGCTGACACCTGCAGGTTTGAACTGCTCAGGATGGTGGGTCATCACATCATTTGGTTCACAGCTATaGTTCATGAAACGAGAGCAA +
Preference number: 4 (lower is better)
Translates to: LQLTPAGLNCSGWWVITSFGSQL*FMKREQ
Trigger: TTGCTCTCGTTTCATGAATCATAGCTGTGAACCAAA...TGATGTGATGACCCACCATCCTGAGCAGTTCAAACCTGCAGGTGTCAGCTGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000153838.8
CDS-3UTR TCA 90 bp AACAGCTCACAACTAGGGGTCATTTGGAGACAGAGCTCACTTTTGCAGCTTACATCAGGCACTGGACAATaGACTGAGACATCTCTTTTC +
Preference number: 4 (lower is better)
Translates to: NSSQLGVIWRQSSLLQLTSGTGQ*TETSLF
Trigger: GAAAAGAGATGTCTCAGTTCATTGTCCAGTGCCTGA...TGTAAGCTGCAAAAGTGAGCTCTGTCTCCAAATGACCCCTAGTTGTGAGCTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS-3UTR GCA 90 bp CTACTGCCTCTGATGGCCTGTAACTGTTACACCAACAGCTCACAACTAGGGGTCGATTATCTGCTTTCCTaGCAAACTGTGAATAACAAC +
Preference number: 4 (lower is better)
Translates to: LLPLMACNCYTNSSQLGVDYLLS*QTVNNN
Trigger: GTTGTTATTCACAGTTTGGCAGGAAAGCAGATAATC...GACCCCTAGTTGTGAGCTGTTGGTGTAACAGTTACAGGCCATCAGAGGCAGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS-3UTR GCA 90 bp ACCACAAGGCAGCCTGCGTTGGGATATTTACATGATAACAAATCCAACCTTGCACTGAGCTTCCCTCTGTaGCACCTCTTGTTCAAACAA +
Preference number: 4 (lower is better)
Translates to: TTRQPALGYLHDNKSNLALSFPL*HLLFKQ
Trigger: TTGTTTGAACAAGAGGTGGCACAGAGGGAAGCTCAG...TGCAAGGTTGGATTTGTTATCATGTAAATATCCCAACGCAGGCTGCCTTGTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS-3UTR CCA 90 bp TTACAGCTGACACCTGCAGGTTTGAACTGCTCAGGATGGTGGGTCATCACATCATCTTCCTTCCCAATATaGGAATCTTCTTTTTGCAGG +
Preference number: 4 (lower is better)
Translates to: LQLTPAGLNCSGWWVITSSSFPI*ESSFCR
Trigger: CCTGCAAAAAGAAGATTCCCATATTGGGAAGGAAGA...TGATGTGATGACCCACCATCCTGAGCAGTTCAAACCTGCAGGTGTCAGCTGTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000153838.8
CDS-3UTR CCA 90 bp CACTTTTGCAGCTTACAGCTGACACCTGCAGGTTTGAACTGCTCAGGATGGTGGTTCTCTCATGCAATATaGAATTCCCTTCTTCTTGAG +
Preference number: 4 (lower is better)
Translates to: HFCSLQLTPAGLNCSGWWFSHAI*NSLLLE
Trigger: CTCAAGAAGAAGGGAATTCCATATTGCATGAGAGAA...CCACCATCCTGAGCAGTTCAAACCTGCAGGTGTCAGCTGTAAGCTGCAAAAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS-3UTR CCA 90 bp TCACTTTTGCAGCTTACAGCTGACACCTGCAGGTTTGAACTGCTCAGGATGGTGCAAAGTAGAATTCTTTaGCACAACCACAACAGACTG +
Preference number: 4 (lower is better)
Translates to: SLLQLTADTCRFELLRMVQSRIL*HNHNRL
Trigger: CAGTCTGTTGTGGTTGTGCCAAAGAATTCTACTTTG...CACCATCCTGAGCAGTTCAAACCTGCAGGTGTCAGCTGTAAGCTGCAAAAGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS-3UTR CCA 90 bp AACAGCTCACAACTAGGGGTCATTTGGAGACAGAGCTCACTTTTGCAGCTTACACATATGCATGTCTCCTaGTCTCTAATCCATCTTCCC +
Preference number: 4 (lower is better)
Translates to: NSSQLGVIWRQSSLLQLTHMHVS*SLIHLP
Trigger: GGGAAGATGGATTAGAGACCAGGAGACATGCATATG...TGTAAGCTGCAAAAGTGAGCTCTGTCTCCAAATGACCCCTAGTTGTGAGCTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS-3UTR CCA 90 bp GCAGGTTTGAACTGCTCAGGATGGTGGGTCATCACATCAGTAGCACAGCCTTGGAATTCCCTTTTTGAGTaGCATCTATTATCTCGTCAT +
Preference number: 4 (lower is better)
Translates to: AGLNCSGWWVITSVAQPWNSLFE*HLLSRH
Trigger: ATGACGAGATAATAGATGCCACTCAAAAAGGGAATT...CCAAGGCTGTGCTACTGATGTGATGACCCACCATCCTGAGCAGTTCAAACCTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000153838.8
CDS-3UTR CCA 90 bp AACAGCTCACAACTAGGGGTCATTTGGAGACAGAGCTCACTTTTGCAGCTTACATTATCTGGTGGCTCCTaGCTTCTCTCACTTTCAACA +
Preference number: 4 (lower is better)
Translates to: NSSQLGVIWRQSSLLQLTLSGGS*LLSLST
Trigger: TGTTGAAAGTGAGAGAAGCCAGGAGCCACCAGATAA...TGTAAGCTGCAAAAGTGAGCTCTGTCTCCAAATGACCCCTAGTTGTGAGCTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS-3UTR CCA 90 bp AACAGCTCACAACTAGGGGTCATTTGGAGACAGAGCTCACTTTTGCAGCTTACAGATATACTGAAGACTTaGCTGGGCATAACTCTGCAC +
Preference number: 4 (lower is better)
Translates to: NSSQLGVIWRQSSLLQLTDILKT*LGITLH
Trigger: GTGCAGAGTTATGCCCAGCCAAGTCTTCAGTATATC...TGTAAGCTGCAAAAGTGAGCTCTGTCTCCAAATGACCCCTAGTTGTGAGCTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS-3UTR CCA 90 bp TCTAGACCTGTTAGGAGTCTTTGGAGCTGTTTGATCTCTGAAGGCAGCAGCATCAGAAAAGGAGACACATaGTCAGCTGGTGATGTTAAC +
Preference number: 4 (lower is better)
Translates to: SRPVRSLWSCLISEGSSIRKGDT*SAGDVN
Trigger: GTTAACATCACCAGCTGACCATGTGTCTCCTTTTCT...GATGCTGCTGCCTTCAGAGATCAAACAGCTCCAAAGACTCCTAACAGGTCTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000197655.2
CDS-3UTR TCA 90 bp CTGTTACACCAACAGCTCACAACTAGGGGTCATTTGGAGACAGAGCTCACTTTTATCTTCATCAGACTCTaGACCAAGAAATGTGCCTTC +
Preference number: 4 (lower is better)
Translates to: LLHQQLTTRGHLETELTFIFIRL*TKKCAF
Trigger: GAAGGCACATTTCTTGGTTCAGAGTCTGATGAAGAT...AAAAGTGAGCTCTGTCTCCAAATGACCCCTAGTTGTGAGCTGTTGGTGTAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS-3UTR TCA 90 bp TTTCTCTTTATTTTGAGACTGCTTGTCTGGGTCTCTCTCTCTAGACCTGTTAGGGAATTCCCTTCTTCTTaGGCCTCTTGCAAAGACTGC +
Preference number: 4 (lower is better)
Translates to: FLFILRLLVWVSLSRPVREFPSS*ASCKDC
Trigger: GCAGTCTTTGCAAGAGGCTCAAGAAGAAGGGAATTC...CCTAACAGGTCTAGAGAGAGAGACCCAGACAAGCAGTCTCAAAATAAAGAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000196814.5
CDS-3UTR TCA 90 bp CTGTTACACCAACAGCTCACAACTAGGGGTCATTTGGAGACAGAGCTCACTTTTATCACTTTCATCGCTTaGACTTGCAGAAGATCCAGA +
Preference number: 4 (lower is better)
Translates to: LLHQQLTTRGHLETELTFITFIA*TCRRSR
Trigger: TCTGGATCTTCTGCAAGTTCAAGCGATGAAAGTGAT...AAAAGTGAGCTCTGTCTCCAAATGACCCCTAGTTGTGAGCTGTTGGTGTAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS-3UTR TCA 90 bp CTGTTACACCAACAGCTCACAACTAGGGGTCATTTGGAGACAGAGCTCACTTTTCATGCTACTTCACCTTaGGCTCTTTCATCCTTAGAA +
Preference number: 4 (lower is better)
Translates to: LLHQQLTTRGHLETELTFHATSP*ALSSLE
Trigger: TTCTAAGGATGAAAGAGCTCAAGGTGAAGTAGCATG...AAAAGTGAGCTCTGTCTCCAAATGACCCCTAGTTGTGAGCTGTTGGTGTAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS-3UTR GCA 90 bp TCACTTTTGCAGCTTACAGCTGACACCTGCAGGTTTGAACTGCTCAGGATGGTGCTTTTTATGGTTTCATaGTCTGAAGTCCGTTTGGAT +
Preference number: 4 (lower is better)
Translates to: SLLQLTADTCRFELLRMVLFMVS*SEVRLD
Trigger: ATCCAAACGGACTTCAGAGCATGAAACCATAAAAAG...CACCATCCTGAGCAGTTCAAACCTGCAGGTGTCAGCTGTAAGCTGCAAAAGTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS-3UTR GCA 90 bp TTACAGCTGACACCTGCAGGTTTGAACTGCTCAGGATGGTGGGTCATCACATCACTTTTTATGGTTTCATaGTCTGAAGTCCGTTTGGAT +
Preference number: 4 (lower is better)
Translates to: LQLTPAGLNCSGWWVITSLFMVS*SEVRLD
Trigger: ATCCAAACGGACTTCAGAGCATGAAACCATAAAAAG...TGATGTGATGACCCACCATCCTGAGCAGTTCAAACCTGCAGGTGTCAGCTGTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS-3UTR GCA 90 bp GTTGCTGTTGCTTCTGAGCTTCCCTCTGTGCCACCTCTTGTTCAAACAACTTCCGATTATCTGCTTTCCTaGCAAACTGTGAATAACAAC +
Preference number: 4 (lower is better)
Translates to: VAVASELPSVPPLVQTTSDYLLS*QTVNNN
Trigger: GTTGTTATTCACAGTTTGGCAGGAAAGCAGATAATC...GGAAGTTGTTTGAACAAGAGGTGGCACAGAGGGAAGCTCAGAAGCAACAGCAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000196814.5
CDS-3UTR GCA 90 bp TTACACCAACAGCTCACAACTAGGGGTCATTTGGAGACAGAGCTCACTTTTGCAGGTTGTTTGAGATTGTaGAGGAGAATACTGCTGTTG +
Preference number: 4 (lower is better)
Translates to: LHQQLTTRGHLETELTFAGCLRL*RRILLL
Trigger: CAACAGCAGTATTCTCCTGCACAATCTCAAACAACC...TGCAAAAGTGAGCTCTGTCTCCAAATGACCCCTAGTTGTGAGCTGTTGGTGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS-3UTR CCA 90 bp AACAGCTCACAACTAGGGGTCATTTGGAGACAGAGCTCACTTTTGCAGCTTACATTGTCTTCGTGCCTTTaGGCAAAAATCGACTTGAAG +
Preference number: 4 (lower is better)
Translates to: NSSQLGVIWRQSSLLQLTLSSCL*AKIDLK
Trigger: CTTCAAGTCGATTTTTGCCCAAAGGCACGAAGACAA...TGTAAGCTGCAAAAGTGAGCTCTGTCTCCAAATGACCCCTAGTTGTGAGCTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000153838.8
CDS-3UTR CCA 90 bp CTCACTTTCAACATCAGACACTCCCTCTTCTTCATCTTGGGATGGTGTTTCCTCTACTGTTATCATGCTTaGAATATGATGACCCCCGTC +
Preference number: 4 (lower is better)
Translates to: LTFNIRHSLFFILGWCFLYCYHA*NMMTPV
Trigger: GACGGGGGTCATCATATTCCAAGCATGATAACAGTA...GAGGAAACACCATCCCAAGATGAAGAAGAGGGAGTGTCTGATGTTGAAAGTGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000196814.5
CDS-3UTR CCA 90 bp CTGGGCCTGGAGCTTGTACTGGCATTACAGGAACATTGGAGTCTTGGTGTACAATCAGAAATATGTGTATaGCCTCTTTGTTCCTCATCT +
Preference number: 4 (lower is better)
Translates to: LGLELVLALQEHWSLGVQSEICV*PLCSSS
Trigger: AGATGAGGAACAAAGAGGCCATACACATATTTCTGA...TTGTACACCAAGACTCCAATGTTCCTGTAATGCCAGTACAAGCTCCAGGCCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000196814.5
CDS-3UTR CCA 90 bp CTGTTACACCAACAGCTCACAACTAGGGGTCATTTGGAGACAGAGCTCACTTTTACAACCACAACAGACTaGAGTCGGTTTCTTGGAATA +
Preference number: 4 (lower is better)
Translates to: LLHQQLTTRGHLETELTFTTTTD*SRFLGI
Trigger: TATTCCAAGAAACCGACTCCAGTCTGTTGTGGTTGT...AAAAGTGAGCTCTGTCTCCAAATGACCCCTAGTTGTGAGCTGTTGGTGTAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS-3UTR CCA 90 bp CTGTTACACCAACAGCTCACAACTAGGGGTCATTTGGAGACAGAGCTCACTTTTGCATTACAGGAACATTaGAGTCTTGGTGTACAACAC +
Preference number: 4 (lower is better)
Translates to: LLHQQLTTRGHLETELTFALQEH*SLGVQH
Trigger: GTGTTGTACACCAAGACTCCAATGTTCCTGTAATGC...AAAAGTGAGCTCTGTCTCCAAATGACCCCTAGTTGTGAGCTGTTGGTGTAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS-3UTR CCA 90 bp GGCAGCCTGCGTTGGGATATTTACATGATAACAAATCCAACCTTGCAGGAGAATGGGCTGTCTTCCAGTTaGGAGGTAAAACAATCGTTT +
Preference number: 4 (lower is better)
Translates to: GSLRWDIYMITNPTLQENGLSSS*EVKQSF
Trigger: AAACGATTGTTTTACCTCCCAACTGGAAGACAGCCC...ATTCTCCTGCAAGGTTGGATTTGTTATCATGTAAATATCCCAACGCAGGCTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS-3UTR CCA 90 bp GGCAGCCTGCGTTGGGATATTTACATGATAACAAATCCAACCTTGCAGGAGAATGTTTTCATCATAGGTTaGGGTTCCCAGGTCCATTTC +
Preference number: 4 (lower is better)
Translates to: GSLRWDIYMITNPTLQENVFIIG*GSQVHF
Trigger: GAAATGGACCTGGGAACCCCAACCTATGATGAAAAC...ATTCTCCTGCAAGGTTGGATTTGTTATCATGTAAATATCCCAACGCAGGCTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS-3UTR TCA 90 bp CTGTTACACCAACAGCTCACAACTAGGGGTCATTTGGAGACAGAGCTCACTTTTTTTCCTGCCAAACTGTaGATAACAACTTTCTGCACT +
Preference number: 4 (lower is better)
Translates to: LLHQQLTTRGHLETELTFFPAKL*ITTFCT
Trigger: AGTGCAGAAAGTTGTTATTCACAGTTTGGCAGGAAA...AAAAGTGAGCTCTGTCTCCAAATGACCCCTAGTTGTGAGCTGTTGGTGTAACAG
43% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS-3UTR TCA 90 bp GGTTTTGTGTTTCACATTCTCATTGCACTCCAGGTCCTCGGGGTTCTTACAGTATTTCCTGCCAAACTGTaGATAACAACTTTCTGCACT +
Preference number: 4 (lower is better)
Translates to: GFVFHILIALQVLGVLTVFPAKL*ITTFCT
Trigger: AGTGCAGAAAGTTGTTATTCACAGTTTGGCAGGAAA...TACTGTAAGAACCCCGAGGACCTGGAGTGCAATGAGAATGTGAAACACAAAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000196814.5
CDS-3UTR TCA 90 bp GGCAGCCTGCGTTGGGATATTTACATGATAACAAATCCAACCTTGCAGGAGAATTGTGAGTGTGTGTTCTaGATGAGCTTAAGACAGGTA +
Preference number: 4 (lower is better)
Translates to: GSLRWDIYMITNPTLQENCECVF*MSLRQV
Trigger: TACCTGTCTTAAGCTCATTCAGAACACACACTCACA...ATTCTCCTGCAAGGTTGGATTTGTTATCATGTAAATATCCCAACGCAGGCTGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000153838.8
CDS-3UTR GCA 90 bp GGTTTTGTGTTTCACATTCTCATTGCACTCCAGGTCCTCGGGGTTCTTACAGTAGCCTCTTGCAAAGACTaGCCAGATAACACATTATTA +
Preference number: 4 (lower is better)
Translates to: GFVFHILIALQVLGVLTVASCKD*PDNTLL
Trigger: TAATAATGTGTTATCTGGGCAGTCTTTGCAAGAGGC...TACTGTAAGAACCCCGAGGACCTGGAGTGCAATGAGAATGTGAAACACAAAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000196814.5
CDS-3UTR GCA 90 bp AAACCACAAGGCAGCCTGCGTTGGGATATTTACATGATAACAAATCCAACCTTGCTAGTTTTGTGCCATTaGTGTCTTTGGGCTCTGTCT +
Preference number: 4 (lower is better)
Translates to: KPQGSLRWDIYMITNPTLLVLCH*CLWALS
Trigger: AGACAGAGCCCAAAGACAGCAATGGCACAAAACTAG...CAAGGTTGGATTTGTTATCATGTAAATATCCCAACGCAGGCTGCCTTGTGGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS-3UTR GCA 90 bp CTCTGTCCTCTTTTCACCTATTACACTTTTCATGCATCATCCAACTTCCCAACCCTAGTTTTGTGCCATTaGTGTCTTTGGGCTCTGTCT +
Preference number: 4 (lower is better)
Translates to: LCPLFTYYTFHASSNFPTLVLCH*CLWALS
Trigger: AGACAGAGCCCAAAGACAGCAATGGCACAAAACTAG...GGTTGGGAAGTTGGATGATGCATGAAAAGTGTAATAGGTGAAAAGAGGACAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000197655.2
CDS-3UTR CCA 90 bp AACAGCTCACAACTAGGGGTCATTTGGAGACAGAGCTCACTTTTGCAGCTTACACATGTGATCTTTGACTaGAAGAAGTCCGTACAGAAT +
Preference number: 4 (lower is better)
Translates to: NSSQLGVIWRQSSLLQLTHVIFD*KKSVQN
Trigger: ATTCTGTACGGACTTCTTCCAGTCAAAGATCACATG...TGTAAGCTGCAAAAGTGAGCTCTGTCTCCAAATGACCCCTAGTTGTGAGCTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS-3UTR CCA 90 bp CTGGGCCTGGAGCTTGTACTGGCATTACAGGAACATTGGAGTCTTGGTGTACAAAACAACATCTTTTTATaGTTTCATGCTCTGAAGTCC +
Preference number: 4 (lower is better)
Translates to: LGLELVLALQEHWSLGVQNNIFL*FHALKS
Trigger: GGACTTCAGAGCATGAAACCATAAAAAGATGTTGTT...TTGTACACCAAGACTCCAATGTTCCTGTAATGCCAGTACAAGCTCCAGGCCCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000196814.5
CDS-3UTR CCA 90 bp CTGTTACACCAACAGCTCACAACTAGGGGTCATTTGGAGACAGAGCTCACTTTTGAATCCCAGTTCATTTaGGGGAGAACAACATCTTTT +
Preference number: 4 (lower is better)
Translates to: LLHQQLTTRGHLETELTFESQFI*GRTTSF
Trigger: AAAAGATGTTGTTCTCCCCCAAATGAACTGGGATTC...AAAAGTGAGCTCTGTCTCCAAATGACCCCTAGTTGTGAGCTGTTGGTGTAACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
3UTR CAA 72 bp TCACTTATAATCTTCAGTCTGCGGAATATGAGTTTCTaGGGAGTATCTGTATCCATTTCCGTGCTCGGCTTG +
Preference number: 4 (lower is better)
Translates to: SLIIFSLRNMSF*GVSVSISVLGL
Trigger: CAAGCCGAGCACGGAAATGGATACAGATACTCCCAAGAAACTCATATTCCGCAGACTGAAGATTATAAGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000196814.5
3UTR CAA 72 bp ATCTTCCTGTTTCTTCACAGAATGCACGCTAGGGTCTaGTTTTTCTTCAGCACGAAGTTGGAAATGGAGTTG +
Preference number: 4 (lower is better)
Translates to: IFLFLHRMHARV*FFFSTKLEMEL
Trigger: CAACTCCATTTCCAACTTCGTGCTGAAGAAAAACAAGACCCTAGCGTGCATTCTGTGAAGAAACAGGAAGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000196814.5
3UTR CAA 72 bp TGGAGCTTGTACTGGCATTACAGGAACATTGGAGTCTaGGTGTACAACACTTTCATTCTGAGCTACATACTG +
Preference number: 4 (lower is better)
Translates to: WSLYWHYRNIGV*VYNTFILSYIL
Trigger: CAGTATGTAGCTCAGAATGAAAGTGTTGTACACCAAGACTCCAATGTTCCTGTAATGCCAGTACAAGCTCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000196814.5
CDS-3UTR CCA 90 bp ACCACAAGGCAGCCTGCGTTGGGATATTTACATGATAACAAATCCAACCTTGCAGAATCCCAGTTCATTTaGGGGAGAACAACATCTTTT +
Preference number: 4 (lower is better)
Translates to: TTRQPALGYLHDNKSNLAESQFI*GRTTSF
Trigger: AAAAGATGTTGTTCTCCCCCAAATGAACTGGGATTC...TGCAAGGTTGGATTTGTTATCATGTAAATATCCCAACGCAGGCTGCCTTGTGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS-3UTR CCA 90 bp TTACACCAACAGCTCACAACTAGGGGTCATTTGGAGACAGAGCTCACTTTTGCATTCTCTCATGCAATATaGAATTCCCTTCTTCTTGAG +
Preference number: 4 (lower is better)
Translates to: LHQQLTTRGHLETELTFAFSHAI*NSLLLE
Trigger: CTCAAGAAGAAGGGAATTCCATATTGCATGAGAGAA...TGCAAAAGTGAGCTCTGTCTCCAAATGACCCCTAGTTGTGAGCTGTTGGTGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS-3UTR CCA 90 bp CTGTTACACCAACAGCTCACAACTAGGGGTCATTTGGAGACAGAGCTCACTTTTTCAGAAATATGTGTATaGCCTCTTTGTTCCTCATCT +
Preference number: 4 (lower is better)
Translates to: LLHQQLTTRGHLETELTFSEICV*PLCSSS
Trigger: AGATGAGGAACAAAGAGGCCATACACATATTTCTGA...AAAAGTGAGCTCTGTCTCCAAATGACCCCTAGTTGTGAGCTGTTGGTGTAACAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS-3UTR CCA 90 bp ACCACAAGGCAGCCTGCGTTGGGATATTTACATGATAACAAATCCAACCTTGCAGATAAACTAAGAACCTaGTTCTTATCAGAGAGGCCT +
Preference number: 4 (lower is better)
Translates to: TTRQPALGYLHDNKSNLADKLRT*FLSERP
Trigger: AGGCCTCTCTGATAAGAACCAGGTTCTTAGTTTATC...TGCAAGGTTGGATTTGTTATCATGTAAATATCCCAACGCAGGCTGCCTTGTGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000153838.8
CDS-3UTR CCA 90 bp AGTGTCCTCTTTAGGTTTGTAAACAGCCCCAAACTTCTGCATGTACTTCTTGATGGGGAACACACTTCATaGGGTTTTCATCATAGGTTG +
Preference number: 4 (lower is better)
Translates to: SVLFRFVNSPKLLHVLLDGEHTS*GFHHRL
Trigger: CAACCTATGATGAAAACCCCATGAAGTGTGTTCCCC...ATCAAGAAGTACATGCAGAAGTTTGGGGCTGTTTACAAACCTAAAGAGGACACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000197399.2
CDS-3UTR GCA 90 bp TTACACCAACAGCTCACAACTAGGGGTCATTTGGAGACAGAGCTCACTTTTGCAATGAAACCTGTTTTCTaGACATTTTCAATCTTTGCC +
Preference number: 4 (lower is better)
Translates to: LHQQLTTRGHLETELTFAMKPVF*TFSIFA
Trigger: GGCAAAGATTGAAAATGTGCAGAAAACAGGTTTCAT...TGCAAAAGTGAGCTCTGTCTCCAAATGACCCCTAGTTGTGAGCTGTTGGTGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000153838.8
CDS-3UTR CCA 90 bp CTGTTACACCAACAGCTCACAACTAGGGGTCATTTGGAGACAGAGCTCACTTTTTTTTTGATGTCTTCATaGGGTTTTCATCATAGGTTG +
Preference number: 4 (lower is better)
Translates to: LLHQQLTTRGHLETELTFFLMSS*GFHHRL
Trigger: CAACCTATGATGAAAACCCCATGAAGACATCAAAAA...AAAAGTGAGCTCTGTCTCCAAATGACCCCTAGTTGTGAGCTGTTGGTGTAACAG
41% GC, longest homopolymer 9 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS-3UTR TCA 90 bp AAACCACAAGGCAGCCTGCGTTGGGATATTTACATGATAACAAATCCAACCTTGTGTTCCTTCAAAGTTTaGACTGTGTGTTCTTCCAAA +
Preference number: 4 (lower is better)
Translates to: KPQGSLRWDIYMITNPTLCSFKV*TVCSSK
Trigger: TTTGGAAGAACACACAGTTCAAACTTTGAAGGAACA...CAAGGTTGGATTTGTTATCATGTAAATATCCCAACGCAGGCTGCCTTGTGGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000153838.8
CDS-3UTR TCA 90 bp CTGTCCATGCTATTTTCACTTATAATCTTCAGTCTGCGGAATATGAGTTTCTTGGCATGCTGTTTTCTCTaGAACCGTCTGTTTGAACAG +
Preference number: 4 (lower is better)
Translates to: LSMLFSLIIFSLRNMSFLACCFL*NRLFEQ
Trigger: CTGTTCAAACAGACGGTTTCAGAGAAAACAGCATGC...CAAGAAACTCATATTCCGCAGACTGAAGATTATAAGTGAAAATAGCATGGACAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000196814.5
CDS-3UTR CCA 90 bp ACCACAAGGCAGCCTGCGTTGGGATATTTACATGATAACAAATCCAACCTTGCAAACAACATCTTTTTATaGTTTCATGCTCTGAAGTCC +
Preference number: 4 (lower is better)
Translates to: TTRQPALGYLHDNKSNLANNIFL*FHALKS
Trigger: GGACTTCAGAGCATGAAACCATAAAAAGATGTTGTT...TGCAAGGTTGGATTTGTTATCATGTAAATATCCCAACGCAGGCTGCCTTGTGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS-3UTR CCA 90 bp ACCACAAGGCAGCCTGCGTTGGGATATTTACATGATAACAAATCCAACCTTGCAGGAAGAAAAATTTATTaGACGGGCTTGAAAAATGTG +
Preference number: 4 (lower is better)
Translates to: TTRQPALGYLHDNKSNLAGRKIY*TGLKNV
Trigger: CACATTTTTCAAGCCCGTCCAATAAATTTTTCTTCC...TGCAAGGTTGGATTTGTTATCATGTAAATATCCCAACGCAGGCTGCCTTGTGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS-3UTR TCA 90 bp TCTGTCCTTGATAATATATGGTTGTTTGAGATTGTGCAGGAGAATACTGCTGTTCATGCTACTTCACCTTaGGCTCTTTCATCCTTAGAA +
Preference number: 4 (lower is better)
Translates to: SVLDNIWLFEIVQENTAVHATSP*ALSSLE
Trigger: TTCTAAGGATGAAAGAGCTCAAGGTGAAGTAGCATG...AACAGCAGTATTCTCCTGCACAATCTCAAACAACCATATATTATCAAGGACAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000196814.5
3UTR CAA 72 bp AGACAGTTGAACATGTCTGTCCTTGATAATATATGGTaGTTTGAGATTGTGCAGGAGAATACTGCTGTTGTA +
Preference number: 4 (lower is better)
Translates to: RQLNMSVLDNIW*FEIVQENTAVV
Trigger: TACAACAGCAGTATTCTCCTGCACAATCTCAAACAACCATATATTATCAAGGACAGACATGTTCAACTGTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000196814.5
3UTR CAA 72 bp TTGTCTGTGAATAAGGCGAGGTCACACTATAGACAGTaGAACATGTCTGTCCTTGATAATATATGGTTGTTT +
Preference number: 4 (lower is better)
Translates to: LSVNKARSHYRQ*NMSVLDNIWLF
Trigger: AAACAACCATATATTATCAAGGACAGACATGTTCAACTGTCTATAGTGTGACCTCGCCTTATTCACAGACAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000196814.5
3UTR CAA 72 bp TGTTCAAACAACTTCCTGCGCTCCTCTGTAGAAAGTTaGTTTCGGTCTTTAATTCGTACTTTCTTTTTAGAA +
Preference number: 4 (lower is better)
Translates to: CSNNFLRSSVES*FRSLIRTFFLE
Trigger: TTCTAAAAAGAAAGTACGAATTAAAGACCGAAACAAACTTTCTACAGAGGAGCGCAGGAAGTTGTTTGAACA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000196814.5
ENSMUST00000197655.2
3UTR CAA 72 bp CTGAGAAGCTTTAGATCTTTCCAACTGTCTAGTAACTaGGTAGCCAAATCACTTATATCCACTGTTTTATCT +
Preference number: 4 (lower is better)
Translates to: LRSFRSFQLSSN*VAKSLISTVLS
Trigger: AGATAAAACAGTGGATATAAGTGATTTGGCTACCAAGTTACTAGACAGTTGGAAAGATCTAAAGCTTCTCAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000196814.5
CDS-3UTR CAA 90 bp AGGGTAAAGGATCTGGGGGAGGTGCGCATGGGTCTGTGCGCTGACAGCACCGCCCAATCGTTTTTGGTTTaGGAGGGGAGGGTGGTGGCA +
Preference number: 5 (lower is better)
Translates to: RVKDLGEVRMGLCADSTAQSFLV*EGRVVA
Trigger: TGCCACCACCCTCCCCTCCAAAACCAAAAACGATTG...GGCGGTGCTGTCAGCGCACAGACCCATGCGCACCTCCCCCAGATCCTTTACCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS-3UTR CAA 90 bp GAGGTGCGCATGGGTCTGTGCGCTGACAGCACCGCCAAGGGGGAGACCCAGATTTGTCATCTGGCCTTTTaGTTCCCCGCTCATATGCAG +
Preference number: 5 (lower is better)
Translates to: EVRMGLCADSTAKGETQICHLAF*FPAHMQ
Trigger: CTGCATATGAGCGGGGAACAAAAAGGCCAGATGACA...AATCTGGGTCTCCCCCTTGGCGGTGCTGTCAGCGCACAGACCCATGCGCACCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS-3UTR CAA 90 bp AGGGTAAAGGATCTGGGGGAGGTGCGCATGGGTCTGTGCGCTGACAGCACCGCCCTGTACCACCACTCCTaGTGGGTGAGCTGTGAAAAT +
Preference number: 5 (lower is better)
Translates to: RVKDLGEVRMGLCADSTALYHHS*WVSCEN
Trigger: ATTTTCACAGCTCACCCACAAGGAGTGGTGGTACAG...GGCGGTGCTGTCAGCGCACAGACCCATGCGCACCTCCCCCAGATCCTTTACCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS-3UTR CAA 90 bp GAGGTGCGCATGGGTCTGTGCGCTGACAGCACCGCCAAGGGGGAGACCCAGATTCCAAATCCTCACTTTTaGAAGGTGCTGAGCTCTTCT +
Preference number: 5 (lower is better)
Translates to: EVRMGLCADSTAKGETQIPNPHF*KVLSSS
Trigger: AGAAGAGCTCAGCACCTTCAAAAAGTGAGGATTTGG...AATCTGGGTCTCCCCCTTGGCGGTGCTGTCAGCGCACAGACCCATGCGCACCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS-3UTR CAA 90 bp AGGGTAAAGGATCTGGGGGAGGTGCGCATGGGTCTGTGCGCTGACAGCACCGCCGTACTGTTATCATGCTaGGAATATGATGACCCCCGT +
Preference number: 5 (lower is better)
Translates to: RVKDLGEVRMGLCADSTAVLLSC*EYDDPR
Trigger: ACGGGGGTCATCATATTCCAAGCATGATAACAGTAC...GGCGGTGCTGTCAGCGCACAGACCCATGCGCACCTCCCCCAGATCCTTTACCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS-3UTR CAA 90 bp GAGGTGCGCATGGGTCTGTGCGCTGACAGCACCGCCAAGGGGGAGACCCAGATTTGTGGCCTAGATGTTTaGGCTCTTAATGTGTCCTCT +
Preference number: 5 (lower is better)
Translates to: EVRMGLCADSTAKGETQICGLDV*ALNVSS
Trigger: AGAGGACACATTAAGAGCCAAAACATCTAGGCCACA...AATCTGGGTCTCCCCCTTGGCGGTGCTGTCAGCGCACAGACCCATGCGCACCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS-3UTR CAA 90 bp TGGGTCTGTGCGCTGACAGCACCGCCAAGGGGGAGACCCAGATTTGAGAATGGGCTTCTTTGCTTTTCTTaGCCAGCTCACTGGAGGTGT +
Preference number: 5 (lower is better)
Translates to: WVCALTAPPRGRPRFENGLLCFS*PAHWRC
Trigger: ACACCTCCAGTGAGCTGGCAAAGAAAAGCAAAGAAG...CCCATTCTCAAATCTGGGTCTCCCCCTTGGCGGTGCTGTCAGCGCACAGACCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS-3UTR CAA 90 bp CCGTGGGGTAGGGCAGAAGCCACAGGATTCATCCTTTCCGCTCATACTCCACTCTGTTTCACATTCTCATaGCACTCCAGGTCCTCGGGG +
Preference number: 5 (lower is better)
Translates to: PWGRAEATGFILSAHTPLCFTFS*HSRSSG
Trigger: CCCCGAGGACCTGGAGTGCAATGAGAATGTGAAACA...GAGTGGAGTATGAGCGGAAAGGATGAATCCTGTGGCTTCTGCCCTACCCCACGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS-3UTR CAA 90 bp GAGGTGCGCATGGGTCTGTGCGCTGACAGCACCGCCAAGGGGGAGACCCAGATTAATCGTTTAATTGATTaGATGGAGTTGGAGACCCAG +
Preference number: 5 (lower is better)
Translates to: EVRMGLCADSTAKGETQINRLID*MELETQ
Trigger: CTGGGTCTCCAACTCCATCAAATCAATTAAACGATT...AATCTGGGTCTCCCCCTTGGCGGTGCTGTCAGCGCACAGACCCATGCGCACCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS-3UTR CAA 90 bp GAACTGGAAACTTCCACAGAGGCTGCCACATGCGGCACCACTGGCACAGATGGGGGAATTCCCTTCTTCTaGAGCCTCTTGCAAAGACTG +
Preference number: 5 (lower is better)
Translates to: ELETSTEAATCGTTGTDGGIPFF*SLLQRL
Trigger: CAGTCTTTGCAAGAGGCTCAAGAAGAAGGGAATTCC...CCCATCTGTGCCAGTGGTGCCGCATGTGGCAGCCTCTGTGGAAGTTTCCAGTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000196814.5
CDS-3UTR CAA 90 bp CAGCTGACACCTGCAGGTTTGAACTGCTCAGGATGGTGGGTCATCACATCAGTAGGGATCCACATAGGCTaGCATGGGGTAACCTGGTGG +
Preference number: 5 (lower is better)
Translates to: QLTPAGLNCSGWWVITSVGIHIG*HGVTWW
Trigger: CCACCAGGTTACCCCATGCAAGCCTATGTGGATCCC...TACTGATGTGATGACCCACCATCCTGAGCAGTTCAAACCTGCAGGTGTCAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS-3UTR CAA 90 bp CACTTTTGCAGCTTACAGCTGACACCTGCAGGTTTGAACTGCTCAGGATGGTGGGGGATCCACATAGGCTaGCATGGGGTAACCTGGTGG +
Preference number: 5 (lower is better)
Translates to: HFCSLQLTPAGLNCSGWWGIHIG*HGVTWW
Trigger: CCACCAGGTTACCCCATGCAAGCCTATGTGGATCCC...CCACCATCCTGAGCAGTTCAAACCTGCAGGTGTCAGCTGTAAGCTGCAAAAGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS-3UTR CAA 90 bp AGGTTTGAACTGCTCAGGATGGTGGGTCATCACATCAGTAGCACAGCCTTGGCCGCCCTGGTGCAACTATaGAAGTCACGGCTGCAGTTG +
Preference number: 5 (lower is better)
Translates to: RFELLRMVGHHISSTALAALVQL*KSRLQL
Trigger: CAACTGCAGCCGTGACTTCAATAGTTGCACCAGGGC...GGCCAAGGCTGTGCTACTGATGTGATGACCCACCATCCTGAGCAGTTCAAACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS-3UTR CAA 90 bp AGGGCAGAAGCCACAGGATTCATCCTTTCCGCTCATACTCCACTCTGGCCTGAGCAATCGTTTTTGGTTTaGGAGGGGAGGGTGGTGGCA +
Preference number: 5 (lower is better)
Translates to: RAEATGFILSAHTPLWPEQSFLV*EGRVVA
Trigger: TGCCACCACCCTCCCCTCCAAAACCAAAAACGATTG...CTCAGGCCAGAGTGGAGTATGAGCGGAAAGGATGAATCCTGTGGCTTCTGCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS-3UTR CAA 90 bp CGTGTGGCCAAGGTCTTCCCTAGGCTACTGCCTCTGATGGCCTGTAACTGTTACTTTCGGGCGAGGTGCTaGAAATCTTCAGTGGTGGTG +
Preference number: 5 (lower is better)
Translates to: RVAKVFPRLLPLMACNCYFRARC*KSSVVV
Trigger: CACCACCACTGAAGATTTCAAGCACCTCGCCCGAAA...GTAACAGTTACAGGCCATCAGAGGCAGTAGCCTAGGGAAGACCTTGGCCACACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS GCA 90 bp TCCCTGAAGTCATCCATAGCACACGAAGGCCCCATCAGTTCTGAGTaGTGGGGCACAGATGATTCTCCCTGCTCCATCTCCACTCTAACT +
Preference number: 5 (lower is better)
Translates to: SLKSSIAHEGPISSE*WGTDDSPCSISTLT
Trigger: AGTTAGAGTGGAGATGGAGCAGGGAGAATCATCTGTGCCCCAGCACTCAGAACTGATGGGGCCTTCGTGTGCTATGGATGACTTCAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
ENSMUST00000198823.2
CDS CCA 90 bp TATGTGTACCACAGGTTCCATAGCTGCTGTCAGGCTGCTGGTATGTaGTGGTGGGCCTTTCCTGTTGGGAAAAGTCCCACCCTAGGTTTC +
Preference number: 5 (lower is better)
Translates to: YVYHRFHSCCQAAGM*WWAFPVGKSPTLGF
Trigger: GAAACCTAGGGTGGGACTTTTCCCAACAGGAAAGGCCCACCACCACATACCAGCAGCCTGACAGCAGCTATGGAACCTGTGGTACACATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS CCA 90 bp GTAACATGGCATCTTCCCCAGCTTGGCAAATTCTTTCCACCGCTGTaGGTCCCTGAAGTCATCCATAGCACACGAAGGCCCCATCAGTTC +
Preference number: 5 (lower is better)
Translates to: VTWHLPQLGKFFPPL*VPEVIHSTRRPHQF
Trigger: GAACTGATGGGGCCTTCGTGTGCTATGGATGACTTCAGGGACCCACAGCGGTGGAAAGAATTTGCCAAGCTGGGGAAGATGCCATGTTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
ENSMUST00000198823.2
CDS-3UTR CAA 90 bp GAGGTGCGCATGGGTCTGTGCGCTGACAGCACCGCCAAGGGGGAGACCCAGATTCTTCAGGGTTTTCATTaGGAGAACAGTATATATCTG +
Preference number: 5 (lower is better)
Translates to: EVRMGLCADSTAKGETQILQGFH*ENSIYL
Trigger: CAGATATATACTGTTCTCCAAATGAAAACCCTGAAG...AATCTGGGTCTCCCCCTTGGCGGTGCTGTCAGCGCACAGACCCATGCGCACCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS-3UTR CAA 90 bp TGGGATCCACATAGGCTTGCATGGGGTAACCTGGTGGGTACCCAGCAAAGGGGTTCCTCTTTGCCATCCTaGCATTCTAGCTCACTAGTG +
Preference number: 5 (lower is better)
Translates to: WDPHRLAWGNLVGTQQRGSSLPS*HSSSLV
Trigger: CACTAGTGAGCTAGAATGCAAGGATGGCAAAGAGGA...ACCCCTTTGCTGGGTACCCACCAGGTTACCCCATGCAAGCCTATGTGGATCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000197655.2
CDS-3UTR CAA 90 bp AGGTTTGAACTGCTCAGGATGGTGGGTCATCACATCAGTAGCACAGCCTTGGCCCCTCTGTGCCACCTCTaGTTCAAACAACTTCCTGCG +
Preference number: 5 (lower is better)
Translates to: RFELLRMVGHHISSTALAPLCHL*FKQLPA
Trigger: CGCAGGAAGTTGTTTGAACAAGAGGTGGCACAGAGG...GGCCAAGGCTGTGCTACTGATGTGATGACCCACCATCCTGAGCAGTTCAAACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS-3UTR CAA 90 bp GAGGTGCGCATGGGTCTGTGCGCTGACAGCACCGCCAAGGGGGAGACCCAGATTCTTGATAATATATGGTaGTTTGAGATTGTGCAGGAG +
Preference number: 5 (lower is better)
Translates to: EVRMGLCADSTAKGETQILDNIW*FEIVQE
Trigger: CTCCTGCACAATCTCAAACAACCATATATTATCAAG...AATCTGGGTCTCCCCCTTGGCGGTGCTGTCAGCGCACAGACCCATGCGCACCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS-3UTR CAA 90 bp CTACTGCCTCTGATGGCCTGTAACTGTTACACCAACAGCTCACAACTAGGGGTCAAGTCACGGCTGCAGTaGGCTGTACCACCACTCCTT +
Preference number: 5 (lower is better)
Translates to: LLPLMACNCYTNSSQLGVKSRLQ*AVPPLL
Trigger: AAGGAGTGGTGGTACAGCCAACTGCAGCCGTGACTT...GACCCCTAGTTGTGAGCTGTTGGTGTAACAGTTACAGGCCATCAGAGGCAGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS-3UTR CAA 90 bp CGTGTGGCCAAGGTCTTCCCTAGGCTACTGCCTCTGATGGCCTGTAACTGTTACCGGGCTGTCTTCCAGTaGGGAGGTAAAACAATCGTT +
Preference number: 5 (lower is better)
Translates to: RVAKVFPRLLPLMACNCYRAVFQ*GGKTIV
Trigger: AACGATTGTTTTACCTCCCAACTGGAAGACAGCCCG...GTAACAGTTACAGGCCATCAGAGGCAGTAGCCTAGGGAAGACCTTGGCCACACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS-3UTR CAA 90 bp CTGGCCTTTTTGTTCCCCGCTCATATGCAGAAGAGGGTGGTGACAGAGAGCCCCATGCACGCTAGGGTCTaGTTTTTCTTCAGCACGAAG +
Preference number: 5 (lower is better)
Translates to: LAFLFPAHMQKRVVTESPMHARV*FFFSTK
Trigger: CTTCGTGCTGAAGAAAAACAAGACCCTAGCGTGCAT...GGGGCTCTCTGTCACCACCCTCTTCTGCATATGAGCGGGGAACAAAAAGGCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENSMUST00000197655.2
CDS TCA 90 bp TGGTGGTGGGCCTTTCCTGTTGGGAAAAGTCCCACCCTAGGTTTCTaGGCTCTTCTGATGAGTGCAAGCCATCCATTCGGGAAATGTCAC +
Preference number: 5 (lower is better)
Translates to: WWWAFPVGKSPTLGF*ALLMSASHPFGKCH
Trigger: GTGACATTTCCCGAATGGATGGCTTGCACTCATCAGAAGAGCTCAGAAACCTAGGGTGGGACTTTTCCCAACAGGAAAGGCCCACCACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS CCA 90 bp CTGAAGTCATCCATAGCACACGAAGGCCCCATCAGTTCTGAGTGCTaGGGCACAGATGATTCTCCCTGCTCCATCTCCACTCTAACTTTC +
Preference number: 5 (lower is better)
Translates to: LKSSIAHEGPISSEC*GTDDSPCSISTLTF
Trigger: GAAAGTTAGAGTGGAGATGGAGCAGGGAGAATCATCTGTGCCCCAGCACTCAGAACTGATGGGGCCTTCGTGTGCTATGGATGACTTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
ENSMUST00000198823.2
CDS-3UTR CAA 90 bp TGGGTCTGTGCGCTGACAGCACCGCCAAGGGGGAGACCCAGATTTGAGAATGGGTGCTCTGAAGTCCGTTaGGATTCTCTTTCTAGTTTT +
Preference number: 5 (lower is better)
Translates to: WVCALTAPPRGRPRFENGCSEVR*DSLSSF
Trigger: AAAACTAGAAAGAGAATCCAAACGGACTTCAGAGCA...CCCATTCTCAAATCTGGGTCTCCCCCTTGGCGGTGCTGTCAGCGCACAGACCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS-3UTR CAA 90 bp TGGGTCTGTGCGCTGACAGCACCGCCAAGGGGGAGACCCAGATTTGAGAATGGGTTTCATCGCTTGAACTaGCAGAAGATCCAGAATAGT +
Preference number: 5 (lower is better)
Translates to: WVCALTAPPRGRPRFENGFHRLN*QKIQNS
Trigger: ACTATTCTGGATCTTCTGCAAGTTCAAGCGATGAAA...CCCATTCTCAAATCTGGGTCTCCCCCTTGGCGGTGCTGTCAGCGCACAGACCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS-3UTR CAA 90 bp GCAGGTTTGAACTGCTCAGGATGGTGGGTCATCACATCAGTAGCACAGCCTTGGGAGAAGAACAGGGACTaGTCTCTTCCATGGGCAAAG +
Preference number: 5 (lower is better)
Translates to: AGLNCSGWWVITSVAQPWEKNRD*SLPWAK
Trigger: CTTTGCCCATGGAAGAGACAAGTCCCTGTTCTTCTC...CCAAGGCTGTGCTACTGATGTGATGACCCACCATCCTGAGCAGTTCAAACCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS-3UTR CAA 90 bp ATGCTAGGTGTGGGCAGAAGCACCTTTCCAGCATTAGGGTTGCTGGGATCCACATCGAGTCTGTCTGACTaGTACTATCAACCCCGTCAC +
Preference number: 5 (lower is better)
Translates to: MLGVGRSTFPALGLLGSTSSLSD*YYQPRH
Trigger: GTGACGGGGTTGATAGTACAAGTCAGACAGACTCGA...TGTGGATCCCAGCAACCCTAATGCTGGAAAGGTGCTTCTGCCCACACCTAGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000196814.5
CDS-3UTR CAA 90 bp TGGGATCCACATAGGCTTGCATGGGGTAACCTGGTGGGTACCCAGCAAAGGGGTGCTGCCGAGACTTATTaGGGAGATCTTCAAAATCGT +
Preference number: 5 (lower is better)
Translates to: WDPHRLAWGNLVGTQQRGAAETY*GDLQNR
Trigger: ACGATTTTGAAGATCTCCCAAATAAGTCTCGGCAGC...ACCCCTTTGCTGGGTACCCACCAGGTTACCCCATGCAAGCCTATGTGGATCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000196814.5
CDS-3UTR CAA 90 bp AGAGCTCACTTTTGCAGCTTACAGCTGACACCTGCAGGTTTGAACTGCTCAGGAGTGCCATTGCTGTCTTaGGGCTCTGTCTCCGTGTCT +
Preference number: 5 (lower is better)
Translates to: RAHFCSLQLTPAGLNCSGVPLLS*GSVSVS
Trigger: AGACACGGAGACAGAGCCCAAAGACAGCAATGGCAC...TCCTGAGCAGTTCAAACCTGCAGGTGTCAGCTGTAAGCTGCAAAAGTGAGCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS-3UTR CAA 90 bp CAGCTGACACCTGCAGGTTTGAACTGCTCAGGATGGTGGGTCATCACATCAGTACCTCTGTGCCACCTCTaGTTCAAACAACTTCCTGCG +
Preference number: 5 (lower is better)
Translates to: QLTPAGLNCSGWWVITSVPLCHL*FKQLPA
Trigger: CGCAGGAAGTTGTTTGAACAAGAGGTGGCACAGAGG...TACTGATGTGATGACCCACCATCCTGAGCAGTTCAAACCTGCAGGTGTCAGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS-3UTR CAA 90 bp GCAGGTTTGAACTGCTCAGGATGGTGGGTCATCACATCAGTAGCACAGCCTTGGCGGGCTGTCTTCCAGTaGGGAGGTAAAACAATCGTT +
Preference number: 5 (lower is better)
Translates to: AGLNCSGWWVITSVAQPWRAVFQ*GGKTIV
Trigger: AACGATTGTTTTACCTCCCAACTGGAAGACAGCCCG...CCAAGGCTGTGCTACTGATGTGATGACCCACCATCCTGAGCAGTTCAAACCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000153838.8
ENSMUST00000197399.2
ENSMUST00000200460.5
CDS GCA 90 bp GAAGGCCCCATCAGTTCTGAGTGCTGGGGCACAGATGATTCTCCCTaGTCCATCTCCACTCTAACTTTCTTTCTAGCCTGTAGTTCACCA +
Preference number: 5 (lower is better)
Translates to: EGPISSECWGTDDSP*SISTLTFFLACSSP
Trigger: TGGTGAACTACAGGCTAGAAAGAAAGTTAGAGTGGAGATGGAGCAGGGAGAATCATCTGTGCCCCAGCACTCAGAACTGATGGGGCCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS-3UTR CAA 90 bp TTACACCAACAGCTCACAACTAGGGGTCATTTGGAGACAGAGCTCACTTTTGCAGGGGAGATGCTGCTGTaGTACTTGCAGCCAGCTGTG +
Preference number: 5 (lower is better)
Translates to: LHQQLTTRGHLETELTFAGEMLL*YLQPAV
Trigger: CACAGCTGGCTGCAAGTACAACAGCAGCATCTCCCC...TGCAAAAGTGAGCTCTGTCTCCAAATGACCCCTAGTTGTGAGCTGTTGGTGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000153838.8
CDS-3UTR CAA 90 bp GGGGTAGGGCAGAAGCCACAGGATTCATCCTTTCCGCTCATACTCCACTCTGGCATTGATTTGATGGAGTaGGAGACCCAGTCTTTTCTC +
Preference number: 5 (lower is better)
Translates to: GVGQKPQDSSFPLILHSGIDLME*ETQSFL
Trigger: GAGAAAAGACTGGGTCTCCAACTCCATCAAATCAAT...GCCAGAGTGGAGTATGAGCGGAAAGGATGAATCCTGTGGCTTCTGCCCTACCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS-3UTR CAA 90 bp TCTGGCCTTTTTGTTCCCCGCTCATATGCAGAAGAGGGTGGTGACAGAGAGCCCATCTGGTACTTGCCCTaGGATTCGATCATAAGCAAG +
Preference number: 5 (lower is better)
Translates to: SGLFVPRSYAEEGGDREPIWYLP*DSIISK
Trigger: CTTGCTTATGATCGAATCCAAGGGCAAGTACCAGAT...GGGCTCTCTGTCACCACCCTCTTCTGCATATGAGCGGGGAACAAAAAGGCCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000196814.5
CDS-3UTR CAA 90 bp TGGGATCCACATAGGCTTGCATGGGGTAACCTGGTGGGTACCCAGCAAAGGGGTACATGCTACTTCACCTaGAGCTCTTTCATCCTTAGA +
Preference number: 5 (lower is better)
Translates to: WDPHRLAWGNLVGTQQRGTCYFT*SSFILR
Trigger: TCTAAGGATGAAAGAGCTCAAGGTGAAGTAGCATGT...ACCCCTTTGCTGGGTACCCACCAGGTTACCCCATGCAAGCCTATGTGGATCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000196814.5
CDS-3UTR CAA 90 bp AGGTTTGAACTGCTCAGGATGGTGGGTCATCACATCAGTAGCACAGCCTTGGCCTCTAGTTTTGTGCCATaGCTGTCTTTGGGCTCTGTC +
Preference number: 5 (lower is better)
Translates to: RFELLRMVGHHISSTALASSFVP*LSLGSV
Trigger: GACAGAGCCCAAAGACAGCAATGGCACAAAACTAGA...GGCCAAGGCTGTGCTACTGATGTGATGACCCACCATCCTGAGCAGTTCAAACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS-3UTR CAA 90 bp CTTACAGCTGACACCTGCAGGTTTGAACTGCTCAGGATGGTGGGTCATCACATCTGTCATCTGGCCTTTTaGTTCCCCGCTCATATGCAG +
Preference number: 5 (lower is better)
Translates to: LTADTCRFELLRMVGHHICHLAF*FPAHMQ
Trigger: CTGCATATGAGCGGGGAACAAAAAGGCCAGATGACA...GATGTGATGACCCACCATCCTGAGCAGTTCAAACCTGCAGGTGTCAGCTGTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS-3UTR CAA 90 bp AGCTCACTTTTGCAGCTTACAGCTGACACCTGCAGGTTTGAACTGCTCAGGATGCTGCATCTGTTGCTGTaGCTTCTGAGCTTCCCTCTG +
Preference number: 5 (lower is better)
Translates to: SSLLQLTADTCRFELLRMLHLLL*LLSFPL
Trigger: CAGAGGGAAGCTCAGAAGCAACAGCAACAGATGCAG...CATCCTGAGCAGTTCAAACCTGCAGGTGTCAGCTGTAAGCTGCAAAAGTGAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS-3UTR CAA 90 bp TTCAGTGGTGGTGATCCTGCCCACCTTGCAGTCAGGTTTCCGGTAAGGATTCAGGGTTTTCATCATAGGTaGGGGTTCCCAGGTCCATTT +
Preference number: 5 (lower is better)
Translates to: FSGGDPAHLAVRFPVRIQGFHHR*GFPGPF
Trigger: AAATGGACCTGGGAACCCCAACCTATGATGAAAACC...CTGAATCCTTACCGGAAACCTGACTGCAAGGTGGGCAGGATCACCACCACTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000197399.2
CDS GCA 90 bp GTTCAGTACTTTGTTGATACTTATGTGTACCACAGGTTCCATAGCTaGTGTCAGGCTGCTGGTATGTGGTGGTGGGCCTTTCCTGTTGGG +
Preference number: 5 (lower is better)
Translates to: VQYFVDTYVYHRFHS*CQAAGMWWWAFPVG
Trigger: CCCAACAGGAAAGGCCCACCACCACATACCAGCAGCCTGACAGCAGCTATGGAACCTGTGGTACACATAAGTATCAACAAAGTACTGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS-3UTR CAA 90 bp AGGTTTGAACTGCTCAGGATGGTGGGTCATCACATCAGTAGCACAGCCTTGGCCCTTGAAGCAACACCTTaGAACACTGGTCCTTTGATG +
Preference number: 5 (lower is better)
Translates to: RFELLRMVGHHISSTALALEATP*NTGPLM
Trigger: CATCAAAGGACCAGTGTTCAAAGGTGTTGCTTCAAG...GGCCAAGGCTGTGCTACTGATGTGATGACCCACCATCCTGAGCAGTTCAAACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000153838.8
CDS-3UTR CAA 90 bp GAACTGGAAACTTCCACAGAGGCTGCCACATGCGGCACCACTGGCACAGATGGGTTAATTCACTACCTTTaGAACAAGGAGTCTGCAAAC +
Preference number: 5 (lower is better)
Translates to: ELETSTEAATCGTTGTDGLIHYL*NKESAN
Trigger: GTTTGCAGACTCCTTGTTCAAAAGGTAGTGAATTAA...CCCATCTGTGCCAGTGGTGCCGCATGTGGCAGCCTCTGTGGAAGTTTCCAGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000196814.5
CDS-3UTR CAA 90 bp GACACCTGCAGGTTTGAACTGCTCAGGATGGTGGGTCATCACATCAGTAGCACAGAAAGCATGCAAGCCTaGATCAAAGGGGATACCTCT +
Preference number: 5 (lower is better)
Translates to: DTCRFELLRMVGHHISSTESMQA*IKGDTS
Trigger: AGAGGTATCCCCTTTGATCAAGGCTTGCATGCTTTC...TGTGCTACTGATGTGATGACCCACCATCCTGAGCAGTTCAAACCTGCAGGTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS-3UTR CAA 90 bp CGTGTGGCCAAGGTCTTCCCTAGGCTACTGCCTCTGATGGCCTGTAACTGTTACAATCACTTTCATCGCTaGAACTTGCAGAAGATCCAG +
Preference number: 5 (lower is better)
Translates to: RVAKVFPRLLPLMACNCYNHFHR*NLQKIQ
Trigger: CTGGATCTTCTGCAAGTTCAAGCGATGAAAGTGATT...GTAACAGTTACAGGCCATCAGAGGCAGTAGCCTAGGGAAGACCTTGGCCACACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS-3UTR CAA 90 bp GGGGTAGGGCAGAAGCCACAGGATTCATCCTTTCCGCTCATACTCCACTCTGGCCGGAATATGAGTTTCTaGGGAGTATCTGTATCCATT +
Preference number: 5 (lower is better)
Translates to: GVGQKPQDSSFPLILHSGRNMSF*GVSVSI
Trigger: AATGGATACAGATACTCCCAAGAAACTCATATTCCG...GCCAGAGTGGAGTATGAGCGGAAAGGATGAATCCTGTGGCTTCTGCCCTACCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS-3UTR CAA 90 bp CAGCTGACACCTGCAGGTTTGAACTGCTCAGGATGGTGGGTCATCACATCAGTATCCTCTTTGCCATCCTaGCATTCTAGCTCACTAGTG +
Preference number: 5 (lower is better)
Translates to: QLTPAGLNCSGWWVITSVSSLPS*HSSSLV
Trigger: CACTAGTGAGCTAGAATGCAAGGATGGCAAAGAGGA...TACTGATGTGATGACCCACCATCCTGAGCAGTTCAAACCTGCAGGTGTCAGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS-3UTR CAA 90 bp TTACACCAACAGCTCACAACTAGGGGTCATTTGGAGACAGAGCTCACTTTTGCAGTGCCATTGCTGTCTTaGGGCTCTGTCTCCGTGTCT +
Preference number: 5 (lower is better)
Translates to: LHQQLTTRGHLETELTFAVPLLS*GSVSVS
Trigger: AGACACGGAGACAGAGCCCAAAGACAGCAATGGCAC...TGCAAAAGTGAGCTCTGTCTCCAAATGACCCCTAGTTGTGAGCTGTTGGTGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS-3UTR CAA 90 bp TTACAGCTGACACCTGCAGGTTTGAACTGCTCAGGATGGTGGGTCATCACATCAGCACAATTGGAGGAGTaGTCTGTGAATAAGGCGAGG +
Preference number: 5 (lower is better)
Translates to: LQLTPAGLNCSGWWVITSAQLEE*SVNKAR
Trigger: CCTCGCCTTATTCACAGACAACTCCTCCAATTGTGC...TGATGTGATGACCCACCATCCTGAGCAGTTCAAACCTGCAGGTGTCAGCTGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS-3UTR CAA 90 bp AGGGCAGAAGCCACAGGATTCATCCTTTCCGCTCATACTCCACTCTGGCCTGAGCATAACTCTGCACAATaGGAGGAGTTGTCTGTGAAT +
Preference number: 5 (lower is better)
Translates to: RAEATGFILSAHTPLWPEHNSAQ*EELSVN
Trigger: ATTCACAGACAACTCCTCCAATTGTGCAGAGTTATG...CTCAGGCCAGAGTGGAGTATGAGCGGAAAGGATGAATCCTGTGGCTTCTGCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS-3UTR CAA 90 bp CAGCTGACACCTGCAGGTTTGAACTGCTCAGGATGGTGGGTCATCACATCAGTAGGATATACTGAAGACTaGGCTGGGCATAACTCTGCA +
Preference number: 5 (lower is better)
Translates to: QLTPAGLNCSGWWVITSVGYTED*AGHNSA
Trigger: TGCAGAGTTATGCCCAGCCAAGTCTTCAGTATATCC...TACTGATGTGATGACCCACCATCCTGAGCAGTTCAAACCTGCAGGTGTCAGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS-3UTR CAA 90 bp AACAGCTCACAACTAGGGGTCATTTGGAGACAGAGCTCACTTTTGCAGCTTACAAAGTCACGGCTGCAGTaGGCTGTACCACCACTCCTT +
Preference number: 5 (lower is better)
Translates to: NSSQLGVIWRQSSLLQLTKSRLQ*AVPPLL
Trigger: AAGGAGTGGTGGTACAGCCAACTGCAGCCGTGACTT...TGTAAGCTGCAAAAGTGAGCTCTGTCTCCAAATGACCCCTAGTTGTGAGCTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS-3UTR CAA 90 bp AACAGCTCACAACTAGGGGTCATTTGGAGACAGAGCTCACTTTTGCAGCTTACAGCCCTGGTGCAACTATaGAAGTCACGGCTGCAGTTG +
Preference number: 5 (lower is better)
Translates to: NSSQLGVIWRQSSLLQLTALVQL*KSRLQL
Trigger: CAACTGCAGCCGTGACTTCAATAGTTGCACCAGGGC...TGTAAGCTGCAAAAGTGAGCTCTGTCTCCAAATGACCCCTAGTTGTGAGCTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS-3UTR CAA 90 bp AGCTTACAGCTGACACCTGCAGGTTTGAACTGCTCAGGATGGTGGGTCATCACAGGTTTTCATCATAGGTaGGGGTTCCCAGGTCCATTT +
Preference number: 5 (lower is better)
Translates to: SLQLTPAGLNCSGWWVITGFHHR*GFPGPF
Trigger: AAATGGACCTGGGAACCCCAACCTATGATGAAAACC...TGTGATGACCCACCATCCTGAGCAGTTCAAACCTGCAGGTGTCAGCTGTAAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000153838.8
ENSMUST00000197399.2
ENSMUST00000200460.5
CDS-3UTR CAA 90 bp CTACTGCCTCTGATGGCCTGTAACTGTTACACCAACAGCTCACAACTAGGGGTCCTTCTTTGCTTTTCTTaGCCAGCTCACTGGAGGTGT +
Preference number: 5 (lower is better)
Translates to: LLPLMACNCYTNSSQLGVLLCFS*PAHWRC
Trigger: ACACCTCCAGTGAGCTGGCAAAGAAAAGCAAAGAAG...GACCCCTAGTTGTGAGCTGTTGGTGTAACAGTTACAGGCCATCAGAGGCAGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS-3UTR CAA 90 bp CAGCTGACACCTGCAGGTTTGAACTGCTCAGGATGGTGGGTCATCACATCAGTAGGAATCCCAGTTCATTaGGGGGAGAACAACATCTTT +
Preference number: 5 (lower is better)
Translates to: QLTPAGLNCSGWWVITSVGIPVH*GENNIF
Trigger: AAAGATGTTGTTCTCCCCCAAATGAACTGGGATTCC...TACTGATGTGATGACCCACCATCCTGAGCAGTTCAAACCTGCAGGTGTCAGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS-3UTR CAA 90 bp TCATCTGGCCTTTTTGTTCCCCGCTCATATGCAGAAGAGGGTGGTGACAGAGAGGTACTGTTATCATGCTaGGAATATGATGACCCCCGT +
Preference number: 5 (lower is better)
Translates to: SSGLFVPRSYAEEGGDREVLLSC*EYDDPR
Trigger: ACGGGGGTCATCATATTCCAAGCATGATAACAGTAC...CTCTCTGTCACCACCCTCTTCTGCATATGAGCGGGGAACAAAAAGGCCAGATGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000196814.5
CDS-3UTR CAA 90 bp GCAGGTTTGAACTGCTCAGGATGGTGGGTCATCACATCAGTAGCACAGCCTTGGAATCACTTTCATCGCTaGAACTTGCAGAAGATCCAG +
Preference number: 5 (lower is better)
Translates to: AGLNCSGWWVITSVAQPWNHFHR*NLQKIQ
Trigger: CTGGATCTTCTGCAAGTTCAAGCGATGAAAGTGATT...CCAAGGCTGTGCTACTGATGTGATGACCCACCATCCTGAGCAGTTCAAACCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS-3UTR CAA 90 bp TTTCACATTCTCATTGCACTCCAGGTCCTCGGGGTTCTTACAGTACTTCAGCTCGAGAAGAACAGGGACTaGTCTCTTCCATGGGCAAAG +
Preference number: 5 (lower is better)
Translates to: FHILIALQVLGVLTVLQLEKNRD*SLPWAK
Trigger: CTTTGCCCATGGAAGAGACAAGTCCCTGTTCTTCTC...GAGCTGAAGTACTGTAAGAACCCCGAGGACCTGGAGTGCAATGAGAATGTGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000196814.5
CDS-3UTR CAA 90 bp CAGCTGACACCTGCAGGTTTGAACTGCTCAGGATGGTGGGTCATCACATCAGTAGCTGCCGAGACTTATTaGGGAGATCTTCAAAATCGT +
Preference number: 5 (lower is better)
Translates to: QLTPAGLNCSGWWVITSVAAETY*GDLQNR
Trigger: ACGATTTTGAAGATCTCCCAAATAAGTCTCGGCAGC...TACTGATGTGATGACCCACCATCCTGAGCAGTTCAAACCTGCAGGTGTCAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS-3UTR CAA 90 bp AGGTTTGAACTGCTCAGGATGGTGGGTCATCACATCAGTAGCACAGCCTTGGCCGCGTCTTTAATTGAATaGCTGCTTATTTCCGGTGCT +
Preference number: 5 (lower is better)
Translates to: RFELLRMVGHHISSTALAASLIE*LLISGA
Trigger: AGCACCGGAAATAAGCAGCAATTCAATTAAAGACGC...GGCCAAGGCTGTGCTACTGATGTGATGACCCACCATCCTGAGCAGTTCAAACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS-3UTR CAA 90 bp AGGTTTGAACTGCTCAGGATGGTGGGTCATCACATCAGTAGCACAGCCTTGGCCAACAGCAGTCTTAGTTaGAGACCAGCGCTGAATAAT +
Preference number: 5 (lower is better)
Translates to: RFELLRMVGHHISSTALANSSLS*RPALNN
Trigger: ATTATTCAGCGCTGGTCTCAAACTAAGACTGCTGTT...GGCCAAGGCTGTGCTACTGATGTGATGACCCACCATCCTGAGCAGTTCAAACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS-3UTR CAA 90 bp AGAGCTCACTTTTGCAGCTTACAGCTGACACCTGCAGGTTTGAACTGCTCAGGATCCTCTTTGCCATCCTaGCATTCTAGCTCACTAGTG +
Preference number: 5 (lower is better)
Translates to: RAHFCSLQLTPAGLNCSGSSLPS*HSSSLV
Trigger: CACTAGTGAGCTAGAATGCAAGGATGGCAAAGAGGA...TCCTGAGCAGTTCAAACCTGCAGGTGTCAGCTGTAAGCTGCAAAAGTGAGCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS-3UTR CAA 90 bp TCACTTTTGCAGCTTACAGCTGACACCTGCAGGTTTGAACTGCTCAGGATGGTGTCTAGTTTTGTGCCATaGCTGTCTTTGGGCTCTGTC +
Preference number: 5 (lower is better)
Translates to: SLLQLTADTCRFELLRMVSSFVP*LSLGSV
Trigger: GACAGAGCCCAAAGACAGCAATGGCACAAAACTAGA...CACCATCCTGAGCAGTTCAAACCTGCAGGTGTCAGCTGTAAGCTGCAAAAGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS-3UTR CAA 90 bp GTTGCTGTTGCTTCTGAGCTTCCCTCTGTGCCACCTCTTGTTCAAACAACTTCCTCTAGTTTTGTGCCATaGCTGTCTTTGGGCTCTGTC +
Preference number: 5 (lower is better)
Translates to: VAVASELPSVPPLVQTTSSSFVP*LSLGSV
Trigger: GACAGAGCCCAAAGACAGCAATGGCACAAAACTAGA...GGAAGTTGTTTGAACAAGAGGTGGCACAGAGGGAAGCTCAGAAGCAACAGCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000197655.2
CDS-3UTR CAA 90 bp CAGCTGACACCTGCAGGTTTGAACTGCTCAGGATGGTGGGTCATCACATCAGTAAGGAGAATACTGCTGTaGTACACTGACAGACTGTTG +
Preference number: 5 (lower is better)
Translates to: QLTPAGLNCSGWWVITSVRRILL*YTDRLL
Trigger: CAACAGTCTGTCAGTGTACAACAGCAGTATTCTCCT...TACTGATGTGATGACCCACCATCCTGAGCAGTTCAAACCTGCAGGTGTCAGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS-3UTR CAA 90 bp AGGGCAGAAGCCACAGGATTCATCCTTTCCGCTCATACTCCACTCTGGCCTGAGGGTCCAGTAGATTATTaGTTACAACCATTTCAGGTG +
Preference number: 5 (lower is better)
Translates to: RAEATGFILSAHTPLWPEGPVDY*LQPFQV
Trigger: CACCTGAAATGGTTGTAACAAATAATCTACTGGACC...CTCAGGCCAGAGTGGAGTATGAGCGGAAAGGATGAATCCTGTGGCTTCTGCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS-3UTR CAA 90 bp AACAGCTCACAACTAGGGGTCATTTGGAGACAGAGCTCACTTTTGCAGCTTACATTTCGGGCGAGGTGCTaGAAATCTTCAGTGGTGGTG +
Preference number: 5 (lower is better)
Translates to: NSSQLGVIWRQSSLLQLTFRARC*KSSVVV
Trigger: CACCACCACTGAAGATTTCAAGCACCTCGCCCGAAA...TGTAAGCTGCAAAAGTGAGCTCTGTCTCCAAATGACCCCTAGTTGTGAGCTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS TCA 90 bp TTGGATTCGATCATAAGCAAGCCCAGTTCCTGGAGGTCTACCTGCTaGTCTTGGATCCCAATAGCCATTGCCTTGCCAGTAATTATGGGT +
Preference number: 5 (lower is better)
Translates to: LDSIISKPSSWRSTC*SWIPIAIALPVIMG
Trigger: ACCCATAATTACTGGCAAGGCAATGGCTATTGGGATCCAAGATCAGCAGGTAGACCTCCAGGAACTGGGCTTGCTTATGATCGAATCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS-3UTR CAA 90 bp CACTTTTGCAGCTTACAGCTGACACCTGCAGGTTTGAACTGCTCAGGATGGTGGTTTGTCTTCGTGCCTTaGGGCAAAAATCGACTTGAA +
Preference number: 5 (lower is better)
Translates to: HFCSLQLTPAGLNCSGWWFVFVP*GKNRLE
Trigger: TTCAAGTCGATTTTTGCCCAAAGGCACGAAGACAAA...CCACCATCCTGAGCAGTTCAAACCTGCAGGTGTCAGCTGTAAGCTGCAAAAGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000153838.8
CDS-3UTR CAA 90 bp CTACTGCCTCTGATGGCCTGTAACTGTTACACCAACAGCTCACAACTAGGGGTCCAGGAGATGATCTGCTaGTTCCTTCAAAGTTTGAAC +
Preference number: 5 (lower is better)
Translates to: LLPLMACNCYTNSSQLGVQEMIC*FLQSLN
Trigger: GTTCAAACTTTGAAGGAACAAGCAGATCATCTCCTG...GACCCCTAGTTGTGAGCTGTTGGTGTAACAGTTACAGGCCATCAGAGGCAGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000153838.8
CDS-3UTR CAA 90 bp TCACTTTTGCAGCTTACAGCTGACACCTGCAGGTTTGAACTGCTCAGGATGGTGCCAAATCCTCACTTTTaGAAGGTGCTGAGCTCTTCT +
Preference number: 5 (lower is better)
Translates to: SLLQLTADTCRFELLRMVPNPHF*KVLSSS
Trigger: AGAAGAGCTCAGCACCTTCAAAAAGTGAGGATTTGG...CACCATCCTGAGCAGTTCAAACCTGCAGGTGTCAGCTGTAAGCTGCAAAAGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS-3UTR CAA 90 bp CGTGTGGCCAAGGTCTTCCCTAGGCTACTGCCTCTGATGGCCTGTAACTGTTACCTTCAGGGTTTTCATTaGGAGAACAGTATATATCTG +
Preference number: 5 (lower is better)
Translates to: RVAKVFPRLLPLMACNCYLQGFH*ENSIYL
Trigger: CAGATATATACTGTTCTCCAAATGAAAACCCTGAAG...GTAACAGTTACAGGCCATCAGAGGCAGTAGCCTAGGGAAGACCTTGGCCACACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS-3UTR CAA 90 bp AGGGCAGAAGCCACAGGATTCATCCTTTCCGCTCATACTCCACTCTGGCCTGAGTCACATATAACTGTCTaGGATTCCAAATGCACATTC +
Preference number: 5 (lower is better)
Translates to: RAEATGFILSAHTPLWPESHITV*DSKCTF
Trigger: GAATGTGCATTTGGAATCCAAGACAGTTATATGTGA...CTCAGGCCAGAGTGGAGTATGAGCGGAAAGGATGAATCCTGTGGCTTCTGCCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS-3UTR CAA 90 bp AGCTCACTTTTGCAGCTTACAGCTGACACCTGCAGGTTTGAACTGCTCAGGATGACTGGAGTCGGTTTCTaGGAATACTGCTATCATCAG +
Preference number: 5 (lower is better)
Translates to: SSLLQLTADTCRFELLRMTGVGF*EYCYHQ
Trigger: CTGATGATAGCAGTATTCCAAGAAACCGACTCCAGT...CATCCTGAGCAGTTCAAACCTGCAGGTGTCAGCTGTAAGCTGCAAAAGTGAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS-3UTR CAA 90 bp GACACCTGCAGGTTTGAACTGCTCAGGATGGTGGGTCATCACATCAGTAGCACAAACAGCAGTCTTAGTTaGAGACCAGCGCTGAATAAT +
Preference number: 5 (lower is better)
Translates to: DTCRFELLRMVGHHISSTNSSLS*RPALNN
Trigger: ATTATTCAGCGCTGGTCTCAAACTAAGACTGCTGTT...TGTGCTACTGATGTGATGACCCACCATCCTGAGCAGTTCAAACCTGCAGGTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS-3UTR CAA 90 bp CTCTGTCCTCTTTTCACCTATTACACTTTTCATGCATCATCCAACTTCCCAACCGTGCCATTGCTGTCTTaGGGCTCTGTCTCCGTGTCT +
Preference number: 5 (lower is better)
Translates to: LCPLFTYYTFHASSNFPTVPLLS*GSVSVS
Trigger: AGACACGGAGACAGAGCCCAAAGACAGCAATGGCAC...GGTTGGGAAGTTGGATGATGCATGAAAAGTGTAATAGGTGAAAAGAGGACAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000197655.2
CDS-3UTR CAA 90 bp CGTGTGGCCAAGGTCTTCCCTAGGCTACTGCCTCTGATGGCCTGTAACTGTTACCAACTGTCTAGTAACTaGGTAGCCAAATCACTTATA +
Preference number: 5 (lower is better)
Translates to: RVAKVFPRLLPLMACNCYQLSSN*VAKSLI
Trigger: TATAAGTGATTTGGCTACCAAGTTACTAGACAGTTG...GTAACAGTTACAGGCCATCAGAGGCAGTAGCCTAGGGAAGACCTTGGCCACACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS-3UTR CAA 90 bp CTACTGCCTCTGATGGCCTGTAACTGTTACACCAACAGCTCACAACTAGGGGTCCAGTTTGACTTTTCTTaGGAATCCGATACACCTCCT +
Preference number: 5 (lower is better)
Translates to: LLPLMACNCYTNSSQLGVQFDFS*ESDTPP
Trigger: AGGAGGTGTATCGGATTCCAAAGAAAAGTCAAACTG...GACCCCTAGTTGTGAGCTGTTGGTGTAACAGTTACAGGCCATCAGAGGCAGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS-3UTR CAA 90 bp CTTACAGCTGACACCTGCAGGTTTGAACTGCTCAGGATGGTGGGTCATCACATCCATAACTCTGCACAATaGGAGGAGTTGTCTGTGAAT +
Preference number: 5 (lower is better)
Translates to: LTADTCRFELLRMVGHHIHNSAQ*EELSVN
Trigger: ATTCACAGACAACTCCTCCAATTGTGCAGAGTTATG...GATGTGATGACCCACCATCCTGAGCAGTTCAAACCTGCAGGTGTCAGCTGTAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS-3UTR CAA 90 bp TGGTTTTGTGTTTCACATTCTCATTGCACTCCAGGTCCTCGGGGTTCTTACAGTCGGGCTGTCTTCCAGTaGGGAGGTAAAACAATCGTT +
Preference number: 5 (lower is better)
Translates to: WFCVSHSHCTPGPRGSYSRAVFQ*GGKTIV
Trigger: AACGATTGTTTTACCTCCCAACTGGAAGACAGCCCG...ACTGTAAGAACCCCGAGGACCTGGAGTGCAATGAGAATGTGAAACACAAAACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000197399.2
CDS-3UTR CAA 90 bp CACTTTTGCAGCTTACAGCTGACACCTGCAGGTTTGAACTGCTCAGGATGGTGGCTGTCTTGGGCTTTTTaGATGTCTTCATGGGGTTTT +
Preference number: 5 (lower is better)
Translates to: HFCSLQLTPAGLNCSGWWLSWAF*MSSWGF
Trigger: AAAACCCCATGAAGACATCAAAAAAGCCCAAGACAG...CCACCATCCTGAGCAGTTCAAACCTGCAGGTGTCAGCTGTAAGCTGCAAAAGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS-3UTR CAA 90 bp CACCTCCAAAACAAGGCCGGCGCCAGTGAGTTAACCACCTCTGTCCTCTTTTCATTCTTCAGCACGAAGTaGGAAATGGAGTTGAGAAAA +
Preference number: 5 (lower is better)
Translates to: HLQNKAGASELTTSVLFSFFSTK*EMELRK
Trigger: TTTTCTCAACTCCATTTCCAACTTCGTGCTGAAGAA...TGAAAAGAGGACAGAGGTGGTTAACTCACTGGCGCCGGCCTTGTTTTGGAGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000197655.2
CDS-3UTR CAA 90 bp GTACCCAGCAAAGGGGTGATGAGAGGCATTATATCCCAGAGAGTCAAAGGGGAGTGCTCTGAAGTCCGTTaGGATTCTCTTTCTAGTTTT +
Preference number: 5 (lower is better)
Translates to: VPSKGVMRGIISQRVKGECSEVR*DSLSSF
Trigger: AAAACTAGAAAGAGAATCCAAACGGACTTCAGAGCA...CTCCCCTTTGACTCTCTGGGATATAATGCCTCTCATCACCCCTTTGCTGGGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000196814.5
CDS-3UTR CAA 90 bp AGCTCACTTTTGCAGCTTACAGCTGACACCTGCAGGTTTGAACTGCTCAGGATGATTGATTTGATGGAGTaGGAGACCCAGTCTTTTCTC +
Preference number: 5 (lower is better)
Translates to: SSLLQLTADTCRFELLRMIDLME*ETQSFL
Trigger: GAGAAAAGACTGGGTCTCCAACTCCATCAAATCAAT...CATCCTGAGCAGTTCAAACCTGCAGGTGTCAGCTGTAAGCTGCAAAAGTGAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS-3UTR CAA 90 bp AGGTTTGAACTGCTCAGGATGGTGGGTCATCACATCAGTAGCACAGCCTTGGCCTCACATATAACTGTCTaGGATTCCAAATGCACATTC +
Preference number: 5 (lower is better)
Translates to: RFELLRMVGHHISSTALASHITV*DSKCTF
Trigger: GAATGTGCATTTGGAATCCAAGACAGTTATATGTGA...GGCCAAGGCTGTGCTACTGATGTGATGACCCACCATCCTGAGCAGTTCAAACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS-3UTR CAA 90 bp TCTAGACCTGTTAGGAGTCTTTGGAGCTGTTTGATCTCTGAAGGCAGCAGCATCACTGGAGTCGGTTTCTaGGAATACTGCTATCATCAG +
Preference number: 5 (lower is better)
Translates to: SRPVRSLWSCLISEGSSITGVGF*EYCYHQ
Trigger: CTGATGATAGCAGTATTCCAAGAAACCGACTCCAGT...GATGCTGCTGCCTTCAGAGATCAAACAGCTCCAAAGACTCCTAACAGGTCTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000196814.5
CDS-3UTR CAA 90 bp GCAGGTTTGAACTGCTCAGGATGGTGGGTCATCACATCAGTAGCACAGCCTTGGGAAGTATTTTTCAGTTaGAGAACAGCCTTTACTCTC +
Preference number: 5 (lower is better)
Translates to: AGLNCSGWWVITSVAQPWEVFFS*RTAFTL
Trigger: GAGAGTAAAGGCTGTTCTCAAACTGAAAAATACTTC...CCAAGGCTGTGCTACTGATGTGATGACCCACCATCCTGAGCAGTTCAAACCTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS-3UTR CAA 90 bp ACCACAAGGCAGCCTGCGTTGGGATATTTACATGATAACAAATCCAACCTTGCATCGAGTCTGTCTGACTaGTACTATCAACCCCGTCAC +
Preference number: 5 (lower is better)
Translates to: TTRQPALGYLHDNKSNLASSLSD*YYQPRH
Trigger: GTGACGGGGTTGATAGTACAAGTCAGACAGACTCGA...TGCAAGGTTGGATTTGTTATCATGTAAATATCCCAACGCAGGCTGCCTTGTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS-3UTR CAA 90 bp AGAGCTCACTTTTGCAGCTTACAGCTGACACCTGCAGGTTTGAACTGCTCAGGAGCGTCTTTAATTGAATaGCTGCTTATTTCCGGTGCT +
Preference number: 5 (lower is better)
Translates to: RAHFCSLQLTPAGLNCSGASLIE*LLISGA
Trigger: AGCACCGGAAATAAGCAGCAATTCAATTAAAGACGC...TCCTGAGCAGTTCAAACCTGCAGGTGTCAGCTGTAAGCTGCAAAAGTGAGCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS-3UTR CAA 90 bp TCACTTTTGCAGCTTACAGCTGACACCTGCAGGTTTGAACTGCTCAGGATGGTGATATCCCGGTGGGATTaGTTCTTCTTCCTTTCTGTT +
Preference number: 5 (lower is better)
Translates to: SLLQLTADTCRFELLRMVISRWD*FFFLSV
Trigger: AACAGAAAGGAAGAAGAACAAATCCCACCGGGATAT...CACCATCCTGAGCAGTTCAAACCTGCAGGTGTCAGCTGTAAGCTGCAAAAGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS-3UTR CAA 90 bp CCTGTTAGGAGTCTTTGGAGCTGTTTGATCTCTGAAGGCAGCAGCATCTCTTCCATATCCCGGTGGGATTaGTTCTTCTTCCTTTCTGTT +
Preference number: 5 (lower is better)
Translates to: PVRSLWSCLISEGSSISSISRWD*FFFLSV
Trigger: AACAGAAAGGAAGAAGAACAAATCCCACCGGGATAT...GGAAGAGATGCTGCTGCCTTCAGAGATCAAACAGCTCCAAAGACTCCTAACAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000196814.5
CDS-3UTR CAA 90 bp CTTACAGCTGACACCTGCAGGTTTGAACTGCTCAGGATGGTGGGTCATCACATCAGAGCAATTCCCTTTTaGAGTGGCATCTATTATCTC +
Preference number: 5 (lower is better)
Translates to: LTADTCRFELLRMVGHHIRAIPF*SGIYYL
Trigger: GAGATAATAGATGCCACTCAAAAAGGGAATTGCTCT...GATGTGATGACCCACCATCCTGAGCAGTTCAAACCTGCAGGTGTCAGCTGTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000153838.8
CDS-3UTR CAA 90 bp GGCAGCCTGCGTTGGGATATTTACATGATAACAAATCCAACCTTGCAGGAGAATCGTTCCAGAAATGACTaGAGGCAGGACTGTGAGTGT +
Preference number: 5 (lower is better)
Translates to: GSLRWDIYMITNPTLQENRSRND*RQDCEC
Trigger: ACACTCACAGTCCTGCCTCAAGTCATTTCTGGAACG...ATTCTCCTGCAAGGTTGGATTTGTTATCATGTAAATATCCCAACGCAGGCTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000153838.8
CDS-3UTR CAA 90 bp CTTACAGCTGACACCTGCAGGTTTGAACTGCTCAGGATGGTGGGTCATCACATCTCACACTATAGACAGTaGAACATGTCTGTCCTTGAT +
Preference number: 5 (lower is better)
Translates to: LTADTCRFELLRMVGHHISHYRQ*NMSVLD
Trigger: ATCAAGGACAGACATGTTCAACTGTCTATAGTGTGA...GATGTGATGACCCACCATCCTGAGCAGTTCAAACCTGCAGGTGTCAGCTGTAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS-3UTR CAA 90 bp CTACTGCCTCTGATGGCCTGTAACTGTTACACCAACAGCTCACAACTAGGGGTCTCACACTATAGACAGTaGAACATGTCTGTCCTTGAT +
Preference number: 5 (lower is better)
Translates to: LLPLMACNCYTNSSQLGVSHYRQ*NMSVLD
Trigger: ATCAAGGACAGACATGTTCAACTGTCTATAGTGTGA...GACCCCTAGTTGTGAGCTGTTGGTGTAACAGTTACAGGCCATCAGAGGCAGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS-3UTR CAA 90 bp CTGTTACACCAACAGCTCACAACTAGGGGTCATTTGGAGACAGAGCTCACTTTTGGATATACTGAAGACTaGGCTGGGCATAACTCTGCA +
Preference number: 5 (lower is better)
Translates to: LLHQQLTTRGHLETELTFGYTED*AGHNSA
Trigger: TGCAGAGTTATGCCCAGCCAAGTCTTCAGTATATCC...AAAAGTGAGCTCTGTCTCCAAATGACCCCTAGTTGTGAGCTGTTGGTGTAACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS-3UTR CAA 90 bp GGCAGCCTGCGTTGGGATATTTACATGATAACAAATCCAACCTTGCAGGAGAATCTGTACCACCACTCCTaGTGGGTGAGCTGTGAAAAT +
Preference number: 5 (lower is better)
Translates to: GSLRWDIYMITNPTLQENLYHHS*WVSCEN
Trigger: ATTTTCACAGCTCACCCACAAGGAGTGGTGGTACAG...ATTCTCCTGCAAGGTTGGATTTGTTATCATGTAAATATCCCAACGCAGGCTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS-3UTR CAA 90 bp TTACAGCTGACACCTGCAGGTTTGAACTGCTCAGGATGGTGGGTCATCACATCACTGTCTTGGGCTTTTTaGATGTCTTCATGGGGTTTT +
Preference number: 5 (lower is better)
Translates to: LQLTPAGLNCSGWWVITSLSWAF*MSSWGF
Trigger: AAAACCCCATGAAGACATCAAAAAAGCCCAAGACAG...TGATGTGATGACCCACCATCCTGAGCAGTTCAAACCTGCAGGTGTCAGCTGTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS CCA 90 bp AGAAGAACAGGGACTTGTCTCTTCCATGGGCAAAGTAGAATTCTTTaGCACAACCACAACAGACTGGAGTCGGTTTCTTGGAATACTGCT +
Preference number: 5 (lower is better)
Translates to: RRTGTCLFHGQSRIL*HNHNRLESVSWNTA
Trigger: AGCAGTATTCCAAGAAACCGACTCCAGTCTGTTGTGGTTGTGCCAAAGAATTCTACTTTGCCCATGGAAGAGACAAGTCCCTGTTCTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS-3UTR CAA 90 bp GACACCTGCAGGTTTGAACTGCTCAGGATGGTGGGTCATCACATCAGTAGCACATTAATTCACTACCTTTaGAACAAGGAGTCTGCAAAC +
Preference number: 5 (lower is better)
Translates to: DTCRFELLRMVGHHISSTLIHYL*NKESAN
Trigger: GTTTGCAGACTCCTTGTTCAAAAGGTAGTGAATTAA...TGTGCTACTGATGTGATGACCCACCATCCTGAGCAGTTCAAACCTGCAGGTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS-3UTR CAA 90 bp CTCGGGGTTCTTACAGTACTTCAGCTCCTTATTCATAACTCCATGAGTCAGCTTGAAAGCATGCAAGCCTaGATCAAAGGGGATACCTCT +
Preference number: 5 (lower is better)
Translates to: LGVLTVLQLLIHNSMSQLESMQA*IKGDTS
Trigger: AGAGGTATCCCCTTTGATCAAGGCTTGCATGCTTTC...AAGCTGACTCATGGAGTTATGAATAAGGAGCTGAAGTACTGTAAGAACCCCGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000196814.5
CDS-3UTR CAA 90 bp AACAGCTCACAACTAGGGGTCATTTGGAGACAGAGCTCACTTTTGCAGCTTACACCACTGCATCTAGAGTaGGAGATGTGTTTTCTTCAC +
Preference number: 5 (lower is better)
Translates to: NSSQLGVIWRQSSLLQLTPLHLE*EMCFLH
Trigger: GTGAAGAAAACACATCTCCAACTCTAGATGCAGTGG...TGTAAGCTGCAAAAGTGAGCTCTGTCTCCAAATGACCCCTAGTTGTGAGCTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS-3UTR CAA 90 bp TGGTTTTGTGTTTCACATTCTCATTGCACTCCAGGTCCTCGGGGTTCTTACAGTCCACTGCATCTAGAGTaGGAGATGTGTTTTCTTCAC +
Preference number: 5 (lower is better)
Translates to: WFCVSHSHCTPGPRGSYSPLHLE*EMCFLH
Trigger: GTGAAGAAAACACATCTCCAACTCTAGATGCAGTGG...ACTGTAAGAACCCCGAGGACCTGGAGTGCAATGAGAATGTGAAACACAAAACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000196814.5
CDS-3UTR CAA 90 bp ACCACAAGGCAGCCTGCGTTGGGATATTTACATGATAACAAATCCAACCTTGCAGGAATTCCCTTCTTCTaGAGCCTCTTGCAAAGACTG +
Preference number: 5 (lower is better)
Translates to: TTRQPALGYLHDNKSNLAGIPFF*SLLQRL
Trigger: CAGTCTTTGCAAGAGGCTCAAGAAGAAGGGAATTCC...TGCAAGGTTGGATTTGTTATCATGTAAATATCCCAACGCAGGCTGCCTTGTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS-3UTR CAA 90 bp AACAGCTCACAACTAGGGGTCATTTGGAGACAGAGCTCACTTTTGCAGCTTACAATCTGGTACTTGCCCTaGGATTCGATCATAAGCAAG +
Preference number: 5 (lower is better)
Translates to: NSSQLGVIWRQSSLLQLTIWYLP*DSIISK
Trigger: CTTGCTTATGATCGAATCCAAGGGCAAGTACCAGAT...TGTAAGCTGCAAAAGTGAGCTCTGTCTCCAAATGACCCCTAGTTGTGAGCTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS-3UTR CAA 90 bp AGCTCACTTTTGCAGCTTACAGCTGACACCTGCAGGTTTGAACTGCTCAGGATGCGGAATATGAGTTTCTaGGGAGTATCTGTATCCATT +
Preference number: 5 (lower is better)
Translates to: SSLLQLTADTCRFELLRMRNMSF*GVSVSI
Trigger: AATGGATACAGATACTCCCAAGAAACTCATATTCCG...CATCCTGAGCAGTTCAAACCTGCAGGTGTCAGCTGTAAGCTGCAAAAGTGAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS-3UTR CAA 90 bp GACACCTGCAGGTTTGAACTGCTCAGGATGGTGGGTCATCACATCAGTAGCACACAACTGTCTAGTAACTaGGTAGCCAAATCACTTATA +
Preference number: 5 (lower is better)
Translates to: DTCRFELLRMVGHHISSTQLSSN*VAKSLI
Trigger: TATAAGTGATTTGGCTACCAAGTTACTAGACAGTTG...TGTGCTACTGATGTGATGACCCACCATCCTGAGCAGTTCAAACCTGCAGGTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS-3UTR CAA 90 bp CTTACAGCTGACACCTGCAGGTTTGAACTGCTCAGGATGGTGGGTCATCACATCTCCTCTGTAGAAAGTTaGTTTCGGTCTTTAATTCGT +
Preference number: 5 (lower is better)
Translates to: LTADTCRFELLRMVGHHISSVES*FRSLIR
Trigger: ACGAATTAAAGACCGAAACAAACTTTCTACAGAGGA...GATGTGATGACCCACCATCCTGAGCAGTTCAAACCTGCAGGTGTCAGCTGTAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS-3UTR CAA 90 bp AACAGCTCACAACTAGGGGTCATTTGGAGACAGAGCTCACTTTTGCAGCTTACAAGGAGAATACTGCTGTaGTACACTGACAGACTGTTG +
Preference number: 5 (lower is better)
Translates to: NSSQLGVIWRQSSLLQLTRRILL*YTDRLL
Trigger: CAACAGTCTGTCAGTGTACAACAGCAGTATTCTCCT...TGTAAGCTGCAAAAGTGAGCTCTGTCTCCAAATGACCCCTAGTTGTGAGCTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS-3UTR CAA 90 bp AGCTTACAGCTGACACCTGCAGGTTTGAACTGCTCAGGATGGTGGGTCATCACACTTGATAATATATGGTaGTTTGAGATTGTGCAGGAG +
Preference number: 5 (lower is better)
Translates to: SLQLTPAGLNCSGWWVITLDNIW*FEIVQE
Trigger: CTCCTGCACAATCTCAAACAACCATATATTATCAAG...TGTGATGACCCACCATCCTGAGCAGTTCAAACCTGCAGGTGTCAGCTGTAAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS GCA 90 bp CACTCTGAGCATGAGCAATGTCAGGCAGGTGATTATCTGCTTTCCTaGCAAACTGTGAATAACAACTTTCTGCACTTCTCTCTGTTCCTT +
Preference number: 5 (lower is better)
Translates to: HSEHEQCQAGDYLLS*QTVNNNFLHFSLFL
Trigger: AAGGAACAGAGAGAAGTGCAGAAAGTTGTTATTCACAGTTTGGCAGGAAAGCAGATAATCACCTGCCTGACATTGCTCATGCTCAGAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS CCA 90 bp TGTAGGAGGAAGGGGAGATGCTGCTGTTGTACTTGCAGCCAGCTGTaGCCTAGATGTCACATGAAGCAAATGTTTCTTAAAATGAATTCT +
Preference number: 5 (lower is better)
Translates to: CRRKGRCCCCTCSQL*PRCHMKQMFLKMNS
Trigger: AGAATTCATTTTAAGAAACATTTGCTTCATGTGACATCTAGGCCACAGCTGGCTGCAAGTACAACAGCAGCATCTCCCCTTCCTCCTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000153838.8
CDS CCA 90 bp GAGAACAGCCTTTACTCTCATACTCTTCCTCATATGCATGTCTCCTaGTCTCTAATCCATCTTCCCAGCGGTCAGAATAATGTTTGTAGC +
Preference number: 5 (lower is better)
Translates to: ENSLYSHTLPHMHVS*SLIHLPSGQNNVCS
Trigger: GCTACAAACATTATTCTGACCGCTGGGAAGATGGATTAGAGACCAGGAGACATGCATATGAGGAAGAGTATGAGAGTAAAGGCTGTTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS-3UTR CAA 90 bp AACAGCTCACAACTAGGGGTCATTTGGAGACAGAGCTCACTTTTGCAGCTTACATTGAACACTGGTCCTTaGATGAAACCTGTTTTCTGC +
Preference number: 5 (lower is better)
Translates to: NSSQLGVIWRQSSLLQLTLNTGP*MKPVFC
Trigger: GCAGAAAACAGGTTTCATCAAAGGACCAGTGTTCAA...TGTAAGCTGCAAAAGTGAGCTCTGTCTCCAAATGACCCCTAGTTGTGAGCTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000153838.8
CDS-3UTR CAA 90 bp GGCAGCCTGCGTTGGGATATTTACATGATAACAAATCCAACCTTGCAGGAGAATATTCCACTCTCGATTTaGGTGGCGAAGATTCTTCTG +
Preference number: 5 (lower is better)
Translates to: GSLRWDIYMITNPTLQENIPLSI*VAKILL
Trigger: CAGAAGAATCTTCGCCACCAAAATCGAGAGTGGAAT...ATTCTCCTGCAAGGTTGGATTTGTTATCATGTAAATATCCCAACGCAGGCTGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000153838.8
CDS-3UTR CAA 90 bp GGCAGCCTGCGTTGGGATATTTACATGATAACAAATCCAACCTTGCAGGAGAATGGAATCCCAGTTCATTaGGGGGAGAACAACATCTTT +
Preference number: 5 (lower is better)
Translates to: GSLRWDIYMITNPTLQENGIPVH*GENNIF
Trigger: AAAGATGTTGTTCTCCCCCAAATGAACTGGGATTCC...ATTCTCCTGCAAGGTTGGATTTGTTATCATGTAAATATCCCAACGCAGGCTGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS-3UTR CAA 90 bp GAAGTTGGTGTATCATATCTGTCATCTGGCCTTTTTGTTCCCCGCTCATATGCATGTGGCCTAGATGTTTaGGCTCTTAATGTGTCCTCT +
Preference number: 5 (lower is better)
Translates to: EVGVSYLSSGLFVPRSYACGLDV*ALNVSS
Trigger: AGAGGACACATTAAGAGCCAAAACATCTAGGCCACA...TGCATATGAGCGGGGAACAAAAAGGCCAGATGACAGATATGATACACCAACTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000196814.5
CDS-3UTR CAA 90 bp GGCAGCCTGCGTTGGGATATTTACATGATAACAAATCCAACCTTGCAGGAGAATGGCATTACAGGAACATaGGAGTCTTGGTGTACAACA +
Preference number: 5 (lower is better)
Translates to: GSLRWDIYMITNPTLQENGITGT*ESWCTT
Trigger: TGTTGTACACCAAGACTCCAATGTTCCTGTAATGCC...ATTCTCCTGCAAGGTTGGATTTGTTATCATGTAAATATCCCAACGCAGGCTGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS-3UTR CAA 90 bp AAACCACAAGGCAGCCTGCGTTGGGATATTTACATGATAACAAATCCAACCTTGGGTTTTCATCATAGGTaGGGGTTCCCAGGTCCATTT +
Preference number: 5 (lower is better)
Translates to: KPQGSLRWDIYMITNPTLGFHHR*GFPGPF
Trigger: AAATGGACCTGGGAACCCCAACCTATGATGAAAACC...CAAGGTTGGATTTGTTATCATGTAAATATCCCAACGCAGGCTGCCTTGTGGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS-3UTR CAA 90 bp TCACTTTTGCAGCTTACAGCTGACACCTGCAGGTTTGAACTGCTCAGGATGGTGTTCTTGATGTACTCCTaGGTTTTGTGTTTCACATTC +
Preference number: 5 (lower is better)
Translates to: SLLQLTADTCRFELLRMVFLMYS*VLCFTF
Trigger: GAATGTGAAACACAAAACCAAGGAGTACATCAAGAA...CACCATCCTGAGCAGTTCAAACCTGCAGGTGTCAGCTGTAAGCTGCAAAAGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS TCA 90 bp GAGTGGCATCTATTATACTGCTCACCTCGTCATTTTTCAGGGCCATaGAGTAGTAGTGGATGTTTTTGTTCCGTGCATATTCTTTCACCC +
Preference number: 5 (lower is better)
Translates to: EWHLLYCSPRHFSGP*SSSGCFCSVHILSP
Trigger: GGGTGAAAGAATATGCACGGAACAAAAACATCCACTACTACTTCATGGCCCTGAAAAATGACGAGGTGAGCAGTATAATAGATGCCACTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000198823.2
CDS GCA 90 bp GTGCTACCAATGCTCTGCTTATATTCATCACATGTATTCTCTGAGTaGCGGTCTGTCGGCTCCCTATTATCACATATAACTGTCTTGGAT +
Preference number: 5 (lower is better)
Translates to: VLPMLCLYSSHVFSE*RSVGSLLSHITVLD
Trigger: ATCCAAGACAGTTATATGTGATAATAGGGAGCCGACAGACCGGCACTCAGAGAATACATGTGATGAATATAAGCAGAGCATTGGTAGCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS GCA 90 bp TCTTTGGCACAACCACAACAGACTGGAGTCGGTTTCTTGGAATACTaGTATCATCAGACTCTGTATCTTCAGAATCACTTTCATCGCTTG +
Preference number: 5 (lower is better)
Translates to: SLAQPQQTGVGFLEY*YHQTLYLQNHFHRL
Trigger: CAAGCGATGAAAGTGATTCTGAAGATACAGAGTCTGATGATAGCAGTATTCCAAGAAACCGACTCCAGTCTGTTGTGGTTGTGCCAAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS CCA 90 bp TCTTCCATGGGCAAAGTAGAATTCTTTGGCACAACCACAACAGACTaGAGTCGGTTTCTTGGAATACTGCTATCATCAGACTCTGTATCT +
Preference number: 5 (lower is better)
Translates to: SSMGKVEFFGTTTTD*SRFLGILLSSDSVS
Trigger: AGATACAGAGTCTGATGATAGCAGTATTCCAAGAAACCGACTCCAGTCTGTTGTGGTTGTGCCAAAGAATTCTACTTTGCCCATGGAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS-3UTR CAA 90 bp GGCAGCCTGCGTTGGGATATTTACATGATAACAAATCCAACCTTGCAGGAGAATGTTTGGAGAATCACTTaGCTTTTCATTGCTAAGCGC +
Preference number: 5 (lower is better)
Translates to: GSLRWDIYMITNPTLQENVWRIT*LFIAKR
Trigger: GCGCTTAGCAATGAAAAGCAAAGTGATTCTCCAAAC...ATTCTCCTGCAAGGTTGGATTTGTTATCATGTAAATATCCCAACGCAGGCTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000153838.8
CDS-3UTR CAA 90 bp GGCAGCCTGCGTTGGGATATTTACATGATAACAAATCCAACCTTGCAGGAGAATACATGCTACTTCACCTaGAGCTCTTTCATCCTTAGA +
Preference number: 5 (lower is better)
Translates to: GSLRWDIYMITNPTLQENTCYFT*SSFILR
Trigger: TCTAAGGATGAAAGAGCTCAAGGTGAAGTAGCATGT...ATTCTCCTGCAAGGTTGGATTTGTTATCATGTAAATATCCCAACGCAGGCTGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS-3UTR CAA 90 bp AAACCACAAGGCAGCCTGCGTTGGGATATTTACATGATAACAAATCCAACCTTGGGCATTACAGGAACATaGGAGTCTTGGTGTACAACA +
Preference number: 5 (lower is better)
Translates to: KPQGSLRWDIYMITNPTLGITGT*ESWCTT
Trigger: TGTTGTACACCAAGACTCCAATGTTCCTGTAATGCC...CAAGGTTGGATTTGTTATCATGTAAATATCCCAACGCAGGCTGCCTTGTGGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS TCA 90 bp ACTAGTGCTACCAATGCTCTGCTTATATTCATCACATGTATTCTCTaGGTGCCGGTCTGTCGGCTCCCTATTATCACATATAACTGTCTT +
Preference number: 5 (lower is better)
Translates to: TSATNALLIFITCIL*VPVCRLPIITYNCL
Trigger: AAGACAGTTATATGTGATAATAGGGAGCCGACAGACCGGCACTCAGAGAATACATGTGATGAATATAAGCAGAGCATTGGTAGCACTAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS TCA 90 bp GAATTGCTGCTTATTTCCGGTGCTTGCACTGATCCCTTGTCCTTCTaGTGGAAGAAAAATTTATTGGACGGGCTTGAAAAATGTGATCCA +
Preference number: 5 (lower is better)
Translates to: ELLLISGACTDPLSF*WKKNLLDGLEKCDP
Trigger: TGGATCACATTTTTCAAGCCCGTCCAATAAATTTTTCTTCCATCAGAAGGACAAGGGATCAGTGCAAGCACCGGAAATAAGCAGCAATTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS GCA 90 bp GGAACATTCAATCATGAGGAGACGATTAAGGCAATCTTCTCCACATaGTACTTCACCTTGAGCTCTTTCATCCTTAGAAAGAGGTGTACA +
Preference number: 5 (lower is better)
Translates to: GTFNHEETIKAIFST*YFTLSSFILRKRCT
Trigger: TGTACACCTCTTTCTAAGGATGAAAGAGCTCAAGGTGAAGTAGCATGTGGAGAAGATTGCCTTAATCGTCTCCTCATGATTGAATGTTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
ENSMUST00000198823.2
CDS CCA 90 bp GTGCTTGCACTGATCCCTTGTCCTTCTGATGGAAGAAAAATTTATTaGACGGGCTTGAAAAATGTGATCCACTTCGTTGATCCCAATGTT +
Preference number: 5 (lower is better)
Translates to: VLALIPCPSDGRKIY*TGLKNVIHFVDPNV
Trigger: AACATTGGGATCAACGAAGTGGATCACATTTTTCAAGCCCGTCCAATAAATTTTTCTTCCATCAGAAGGACAAGGGATCAGTGCAAGCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS-3UTR CAA 90 bp AAACCACAAGGCAGCCTGCGTTGGGATATTTACATGATAACAAATCCAACCTTGCAGTTTGACTTTTCTTaGGAATCCGATACACCTCCT +
Preference number: 5 (lower is better)
Translates to: KPQGSLRWDIYMITNPTLQFDFS*ESDTPP
Trigger: AGGAGGTGTATCGGATTCCAAAGAAAAGTCAAACTG...CAAGGTTGGATTTGTTATCATGTAAATATCCCAACGCAGGCTGCCTTGTGGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS-3UTR CAA 90 bp AACAGCTCACAACTAGGGGTCATTTGGAGACAGAGCTCACTTTTGCAGCTTACATCCTCTGTAGAAAGTTaGTTTCGGTCTTTAATTCGT +
Preference number: 5 (lower is better)
Translates to: NSSQLGVIWRQSSLLQLTSSVES*FRSLIR
Trigger: ACGAATTAAAGACCGAAACAAACTTTCTACAGAGGA...TGTAAGCTGCAAAAGTGAGCTCTGTCTCCAAATGACCCCTAGTTGTGAGCTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS-3UTR CAA 90 bp ACCACAAGGCAGCCTGCGTTGGGATATTTACATGATAACAAATCCAACCTTGCAGGTCCAGTAGATTATTaGTTACAACCATTTCAGGTG +
Preference number: 5 (lower is better)
Translates to: TTRQPALGYLHDNKSNLAGPVDY*LQPFQV
Trigger: CACCTGAAATGGTTGTAACAAATAATCTACTGGACC...TGCAAGGTTGGATTTGTTATCATGTAAATATCCCAACGCAGGCTGCCTTGTGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS-3UTR CAA 90 bp CTGTTACACCAACAGCTCACAACTAGGGGTCATTTGGAGACAGAGCTCACTTTTTTCTTGATGTACTCCTaGGTTTTGTGTTTCACATTC +
Preference number: 5 (lower is better)
Translates to: LLHQQLTTRGHLETELTFFLMYS*VLCFTF
Trigger: GAATGTGAAACACAAAACCAAGGAGTACATCAAGAA...AAAAGTGAGCTCTGTCTCCAAATGACCCCTAGTTGTGAGCTGTTGGTGTAACAG
42% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS TCA 90 bp ACTCCTATGGTAGCGCCGTTCAGAATCATAATAATGAGATCTTTCTaGGCGAGAATAAGACAAACTAGTTCTAGAGGCTCTGTCAGATCT +
Preference number: 5 (lower is better)
Translates to: TPMVAPFRIIIMRSF*ARIRQTSSRGSVRS
Trigger: AGATCTGACAGAGCCTCTAGAACTAGTTTGTCTTATTCTCGCTCAGAAAGATCTCATTATTATGATTCTGAACGGCGCTACCATAGGAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS TCA 90 bp ATCTACCAACATTCTGAAATCCATTTGATGAAAGCATGCAAGCCTTaGTCAAAGGGGATACCTCTGATCCAGTCACACTATCATCAGAAG +
Preference number: 5 (lower is better)
Translates to: IYQHSEIHLMKACKP*SKGIPLIQSHYHQK
Trigger: CTTCTGATGATAGTGTGACTGGATCAGAGGTATCCCCTTTGATCAAGGCTTGCATGCTTTCATCAAATGGATTTCAGAATGTTGGTAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS TCA 90 bp ATGAGCAATGTCAGGCAGGTGATTATCTGCTTTCCTGCCAAACTGTaGATAACAACTTTCTGCACTTCTCTCTGTTCCTTTATGAAGGAA +
Preference number: 5 (lower is better)
Translates to: MSNVRQVIICFPAKL*ITTFCTSLCSFMKE
Trigger: TTCCTTCATAAAGGAACAGAGAGAAGTGCAGAAAGTTGTTATTCACAGTTTGGCAGGAAAGCAGATAATCACCTGCCTGACATTGCTCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS-3UTR CAA 90 bp AAACCACAAGGCAGCCTGCGTTGGGATATTTACATGATAACAAATCCAACCTTGTCACTTTGCTTTTCATaGCTAAGCGCAGTGAGAAAT +
Preference number: 5 (lower is better)
Translates to: KPQGSLRWDIYMITNPTLSLCFS*LSAVRN
Trigger: ATTTCTCACTGCGCTTAGCAATGAAAAGCAAAGTGA...CAAGGTTGGATTTGTTATCATGTAAATATCCCAACGCAGGCTGCCTTGTGGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000153838.8
CDS-3UTR CAA 90 bp TTTCTCTTTATTTTGAGACTGCTTGTCTGGGTCTCTCTCTCTAGACCTGTTAGGTTTCATCGCTTGAACTaGCAGAAGATCCAGAATAGT +
Preference number: 5 (lower is better)
Translates to: FLFILRLLVWVSLSRPVRFHRLN*QKIQNS
Trigger: ACTATTCTGGATCTTCTGCAAGTTCAAGCGATGAAA...CCTAACAGGTCTAGAGAGAGAGACCCAGACAAGCAGTCTCAAAATAAAGAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000196814.5
CDS-3UTR CAA 90 bp GGCAGCCTGCGTTGGGATATTTACATGATAACAAATCCAACCTTGCAGGAGAATGAAGTATTTTTCAGTTaGAGAACAGCCTTTACTCTC +
Preference number: 5 (lower is better)
Translates to: GSLRWDIYMITNPTLQENEVFFS*RTAFTL
Trigger: GAGAGTAAAGGCTGTTCTCAAACTGAAAAATACTTC...ATTCTCCTGCAAGGTTGGATTTGTTATCATGTAAATATCCCAACGCAGGCTGCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS TCA 90 bp TTTTTGTTCCGTGCATATTCTTTCACCCGAGCTTTAAACTCTTTATaGTCAAGTACCTCTCCACAGTATTCCAGGACAAAGGTGTTCGAA +
Preference number: 5 (lower is better)
Translates to: FLFRAYSFTRALNSL*SSTSPQYSRTKVFE
Trigger: TTCGAACACCTTTGTCCTGGAATACTGTGGAGAGGTACTTGATCATAAAGAGTTTAAAGCTCGGGTGAAAGAATATGCACGGAACAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000198823.2
CDS GCA 90 bp TTGACGTATTATGCTGCCTACAAGTATCATCTGAGTCCCTTTCTCTaGATCTACCAACATTCTGAAATCCATTTGATGAAAGCATGCAAG +
Preference number: 5 (lower is better)
Translates to: LTYYAAYKYHLSPFL*IYQHSEIHLMKACK
Trigger: CTTGCATGCTTTCATCAAATGGATTTCAGAATGTTGGTAGATGCAGAGAAAGGGACTCAGATGATACTTGTAGGCAGCATAATACGTCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS GCA 90 bp TCTGTCGGCTCCCTATTATCACATATAACTGTCTTGGATTCCAAATaGACATTCACAAAGCTATGTGAAGAAATCGTCATAGCTGAAGGT +
Preference number: 5 (lower is better)
Translates to: SVGSLLSHITVLDSK*TFTKLCEEIVIAEG
Trigger: ACCTTCAGCTATGACGATTTCTTCACATAGCTTTGTGAATGTGCATTTGGAATCCAAGACAGTTATATGTGATAATAGGGAGCCGACAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS-3UTR CAA 90 bp AGTGTCCTCTTTAGGTTTGTAAACAGCCCCAAACTTCTGCATGTACTTCTTGATAATCGTTTAATTGATTaGATGGAGTTGGAGACCCAG +
Preference number: 5 (lower is better)
Translates to: SVLFRFVNSPKLLHVLLDNRLID*MELETQ
Trigger: CTGGGTCTCCAACTCCATCAAATCAATTAAACGATT...ATCAAGAAGTACATGCAGAAGTTTGGGGCTGTTTACAAACCTAAAGAGGACACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000196814.5
CDS-3UTR CAA 90 bp TTTCTCTTTATTTTGAGACTGCTTGTCTGGGTCTCTCTCTCTAGACCTGTTAGGCAACTGTCTAGTAACTaGGTAGCCAAATCACTTATA +
Preference number: 5 (lower is better)
Translates to: FLFILRLLVWVSLSRPVRQLSSN*VAKSLI
Trigger: TATAAGTGATTTGGCTACCAAGTTACTAGACAGTTG...CCTAACAGGTCTAGAGAGAGAGACCCAGACAAGCAGTCTCAAAATAAAGAGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000197655.2
CDS GCA 90 bp GTCATTTTTCAGGGCCATGAAGTAGTAGTGGATGTTTTTGTTCCGTaGATATTCTTTCACCCGAGCTTTAAACTCTTTATGATCAAGTAC +
Preference number: 5 (lower is better)
Translates to: VIFQGHEVVVDVFVP*IFFHPSFKLFMIKY
Trigger: GTACTTGATCATAAAGAGTTTAAAGCTCGGGTGAAAGAATATGCACGGAACAAAAACATCCACTACTACTTCATGGCCCTGAAAAATGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000198823.2
CDS TCA 90 bp CTTTCCTTGTCAATGCTTGTTGAAGATTTTAAATCATGTGATCTTTaGCTGGAAGAAGTCCGTACAGAATCTTCATCAGACTCTGAACCA +
Preference number: 5 (lower is better)
Translates to: LSLSMLVEDFKSCDL*LEEVRTESSSDSEP
Trigger: TGGTTCAGAGTCTGATGAAGATTCTGTACGGACTTCTTCCAGTCAAAGATCACATGATTTAAAATCTTCAACAAGCATTGACAAGGAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS GCA 90 bp TTCTTCCTTCCCAATATGGGAATCTTCTTTTTGCAGGAGATGATCTaGTTGTTCCTTCAAAGTTTGAACTGTGTGTTCTTCCAAACTATT +
Preference number: 5 (lower is better)
Translates to: FFLPNMGIFFLQEMI*LFLQSLNCVFFQTI
Trigger: AATAGTTTGGAAGAACACACAGTTCAAACTTTGAAGGAACAAGCAGATCATCTCCTGCAAAAAGAAGATTCCCATATTGGGAAGGAAGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000153838.8
CDS CCA 90 bp CCTTGTCAATGCTTGTTGAAGATTTTAAATCATGTGATCTTTGACTaGAAGAAGTCCGTACAGAATCTTCATCAGACTCTGAACCAAGAA +
Preference number: 5 (lower is better)
Translates to: PCQCLLKILNHVIFD*KKSVQNLHQTLNQE
Trigger: TTCTTGGTTCAGAGTCTGATGAAGATTCTGTACGGACTTCTTCCAGTCAAAGATCACATGATTTAAAATCTTCAACAAGCATTGACAAGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS GCA 72 bp CCTGGTGGTGATGTCATTAGTGCTGTTGCTGGGGGTTaGGGCAAGGCCACTGGCTCTGATATCTGTGCTGGT +
Preference number: 6 (lower is better)
Translates to: PGGDVISAVAGG*GKATGSDICAG
Trigger: ACCAGCACAGATATCAGAGCCAGTGGCCTTGCCGCAACCCCCAGCAACAGCACTAATGACATCACCACCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000153838.8
CDS CCA 72 bp CACAGGTTCCATAGCTGCTGTCAGGCTGCTGGTATGTaGTGGTGGGCCTTTCCTGTTGGGAAAAGTCCCACC +
Preference number: 6 (lower is better)
Translates to: HRFHSCCQAAGM*WWAFPVGKSPT
Trigger: GGTGGGACTTTTCCCAACAGGAAAGGCCCACCACCACATACCAGCAGCCTGACAGCAGCTATGGAACCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS CAA 90 bp CTACGTCTCCTGGTAAAGGTCCTGGTGGTGATGTCATTAGTGCTGTaGCTGGGGGTTGCGGCAAGGCCACTGGCTCTGATATCTGTGCTG +
Preference number: 6 (lower is better)
Translates to: LRLLVKVLVVMSLVL*LGVAARPLALISVL
Trigger: CAGCACAGATATCAGAGCCAGTGGCCTTGCCGCAACCCCCAGCAACAGCACTAATGACATCACCACCAGGACCTTTACCAGGAGACGTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000153838.8
CDS GCA 72 bp TCATCCATAGCACACGAAGGCCCCATCAGTTCTGAGTaGTGGGGCACAGATGATTCTCCCTGCTCCATCTCC +
Preference number: 6 (lower is better)
Translates to: SSIAHEGPISSE*WGTDDSPCSIS
Trigger: GGAGATGGAGCAGGGAGAATCATCTGTGCCCCAGCACTCAGAACTGATGGGGCCTTCGTGTGCTATGGATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
ENSMUST00000198823.2
CDS CCA 72 bp AGGTTCCATAGCTGCTGTCAGGCTGCTGGTATGTGGTaGTGGGCCTTTCCTGTTGGGAAAAGTCCCACCCTA +
Preference number: 6 (lower is better)
Translates to: RFHSCCQAAGMW*WAFPVGKSPTL
Trigger: TAGGGTGGGACTTTTCCCAACAGGAAAGGCCCACCACCACATACCAGCAGCCTGACAGCAGCTATGGAACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS CCA 72 bp TCCATAGCACACGAAGGCCCCATCAGTTCTGAGTGCTaGGGCACAGATGATTCTCCCTGCTCCATCTCCACT +
Preference number: 6 (lower is better)
Translates to: SIAHEGPISSEC*GTDDSPCSIST
Trigger: AGTGGAGATGGAGCAGGGAGAATCATCTGTGCCCCAGCACTCAGAACTGATGGGGCCTTCGTGTGCTATGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
ENSMUST00000198823.2
CDS CCA 72 bp CATCTTCCCCAGCTTGGCAAATTCTTTCCACCGCTGTaGGTCCCTGAAGTCATCCATAGCACACGAAGGCCC +
Preference number: 6 (lower is better)
Translates to: HLPQLGKFFPPL*VPEVIHSTRRP
Trigger: GGGCCTTCGTGTGCTATGGATGACTTCAGGGACCCACAGCGGTGGAAAGAATTTGCCAAGCTGGGGAAGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
ENSMUST00000198823.2
CDS CAA 72 bp CTGGTAAAGGTCCTGGTGGTGATGTCATTAGTGCTGTaGCTGGGGGTTGCGGCAAGGCCACTGGCTCTGATA +
Preference number: 6 (lower is better)
Translates to: LVKVLVVMSLVL*LGVAARPLALI
Trigger: TATCAGAGCCAGTGGCCTTGCCGCAACCCCCAGCAACAGCACTAATGACATCACCACCAGGACCTTTACCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000153838.8
CDS TCA 72 bp GCCTTTCCTGTTGGGAAAAGTCCCACCCTAGGTTTCTaGGCTCTTCTGATGAGTGCAAGCCATCCATTCGGG +
Preference number: 6 (lower is better)
Translates to: AFPVGKSPTLGF*ALLMSASHPFG
Trigger: CCCGAATGGATGGCTTGCACTCATCAGAAGAGCTCAGAAACCTAGGGTGGGACTTTTCCCAACAGGAAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS GCA 72 bp TGTTGTAGGAGGAAGGGGAGATGCTGCTGTTGTACTTaGAGCCAGCTGTGGCCTAGATGTCACATGAAGCAA +
Preference number: 6 (lower is better)
Translates to: CCRRKGRCCCCT*SQLWPRCHMKQ
Trigger: TTGCTTCATGTGACATCTAGGCCACAGCTGGCTGCAAGTACAACAGCAGCATCTCCCCTTCCTCCTACAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000153838.8
CDS CAA 90 bp CTGGATTCAGGTGACCTAGATGGTCAGATCTCGAGTCTGTCTGACTaGTACTATCAACCCCGTCACTCTGAGCATGAGCAATGTCAGGCA +
Preference number: 6 (lower is better)
Translates to: LDSGDLDGQISSLSD*YYQPRHSEHEQCQA
Trigger: TGCCTGACATTGCTCATGCTCAGAGTGACGGGGTTGATAGTACAAGTCAGACAGACTCGAGATCTGACCATCTAGGTCACCTGAATCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS CAA 90 bp TTCGATCATAAGCAAGCCCAGTTCCTGGAGGTCTACCTGCTGATCTaGGATCCCAATAGCCATTGCCTTGCCAGTAATTATGGGTCCCAC +
Preference number: 6 (lower is better)
Translates to: FDHKQAQFLEVYLLI*DPNSHCLASNYGSH
Trigger: GTGGGACCCATAATTACTGGCAAGGCAATGGCTATTGGGATCCAAGATCAGCAGGTAGACCTCCAGGAACTGGGCTTGCTTATGATCGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS TCA 72 bp ATCATAAGCAAGCCCAGTTCCTGGAGGTCTACCTGCTaGTCTTGGATCCCAATAGCCATTGCCTTGCCAGTA +
Preference number: 6 (lower is better)
Translates to: IISKPSSWRSTC*SWIPIAIALPV
Trigger: TACTGGCAAGGCAATGGCTATTGGGATCCAAGATCAGCAGGTAGACCTCCAGGAACTGGGCTTGCTTATGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS GCA 72 bp CTTCCCAGCGGTCAGAATAATGTTTGTAGCTCTGACTaGTCCGAGAAGAACAGGGACTTGTCTCTTCCATGG +
Preference number: 6 (lower is better)
Translates to: LPSGQNNVCSSD*SEKNRDLSLPW
Trigger: CCATGGAAGAGACAAGTCCCTGTTCTTCTCGGAGCAGTCAGAGCTACAAACATTATTCTGACCGCTGGGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS CAA 72 bp GGTGACCTAGATGGTCAGATCTCGAGTCTGTCTGACTaGTACTATCAACCCCGTCACTCTGAGCATGAGCAA +
Preference number: 6 (lower is better)
Translates to: GDLDGQISSLSD*YYQPRHSEHEQ
Trigger: TTGCTCATGCTCAGAGTGACGGGGTTGATAGTACAAGTCAGACAGACTCGAGATCTGACCATCTAGGTCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS GCA 72 bp AAGTCCCACCCTAGGTTTCTGAGCTCTTCTGATGAGTaGAAGCCATCCATTCGGGAAATGTCACAAGAGGAA +
Preference number: 6 (lower is better)
Translates to: KSHPRFLSSSDE*KPSIREMSQEE
Trigger: TTCCTCTTGTGACATTTCCCGAATGGATGGCTTGCACTCATCAGAAGAGCTCAGAAACCTAGGGTGGGACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS CCA 72 bp GGGACTTGTCTCTTCCATGGGCAAAGTAGAATTCTTTaGCACAACCACAACAGACTGGAGTCGGTTTCTTGG +
Preference number: 6 (lower is better)
Translates to: GTCLFHGQSRIL*HNHNRLESVSW
Trigger: CCAAGAAACCGACTCCAGTCTGTTGTGGTTGTGCCAAAGAATTCTACTTTGCCCATGGAAGAGACAAGTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS CAA 90 bp GCCTTGCCAGTAATTATGGGTCCCACCATAGTGTTCAGTACTTTGTaGATACTTATGTGTACCACAGGTTCCATAGCTGCTGTCAGGCTG +
Preference number: 6 (lower is better)
Translates to: ALPVIMGPTIVFSTL*ILMCTTGSIAAVRL
Trigger: CAGCCTGACAGCAGCTATGGAACCTGTGGTACACATAAGTATCAACAAAGTACTGAACACTATGGTGGGACCCATAATTACTGGCAAGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS TCA 72 bp AAAACTTCGGGTCCACTTTTAACTGGTGATTCTTTCTaGGCTCTCACGGCTACGTCTCCTGGTAAAGGTCCT +
Preference number: 6 (lower is better)
Translates to: KTSGPLLTGDSF*ALTATSPGKGP
Trigger: AGGACCTTTACCAGGAGACGTAGCCGTGAGAGCTCAGAAAGAATCACCAGTTAAAAGTGGACCCGAAGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000153838.8
CDS CCA 72 bp GGGCAGATTTATAACGGGAAGTACTGTTATCATGCTTaGAATATGATGACCCCCGTCGGAATCCCAGTTCAT +
Preference number: 6 (lower is better)
Translates to: GQIYNGKYCYHA*NMMTPVGIPVH
Trigger: ATGAACTGGGATTCCGACGGGGGTCATCATATTCCAAGCATGATAACAGTACTTCCCGTTATAAATCTGCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS CAA 90 bp ATTGCCTTGCCAGTAATTATGGGTCCCACCATAGTGTTCAGTACTTaGTTGATACTTATGTGTACCACAGGTTCCATAGCTGCTGTCAGG +
Preference number: 6 (lower is better)
Translates to: IALPVIMGPTIVFST*LILMCTTGSIAAVR
Trigger: CCTGACAGCAGCTATGGAACCTGTGGTACACATAAGTATCAACAAAGTACTGAACACTATGGTGGGACCCATAATTACTGGCAAGGCAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS CAA 90 bp CATGAGGAGACGATTAAGGCAATCTTCTCCACATGCTACTTCACCTaGAGCTCTTTCATCCTTAGAAAGAGGTGTACACTCACACTGCAT +
Preference number: 6 (lower is better)
Translates to: HEETIKAIFSTCYFT*SSFILRKRCTLTLH
Trigger: ATGCAGTGTGAGTGTACACCTCTTTCTAAGGATGAAAGAGCTCAAGGTGAAGTAGCATGTGGAGAAGATTGCCTTAATCGTCTCCTCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
ENSMUST00000198823.2
CDS GCA 72 bp GCTCTTTCATCCTTAGAAAGAGGTGTACACTCACACTaGATTCGCTTAATATCCCGGTGGGATTTGTTCTTC +
Preference number: 6 (lower is better)
Translates to: ALSSLERGVHSH*IRLISRWDLFF
Trigger: GAAGAACAAATCCCACCGGGATATTAAGCGAATGCAGTGTGAGTGTACACCTCTTTCTAAGGATGAAAGAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
ENSMUST00000198823.2
CDS CCA 72 bp CTTTGGCACAACCACAACAGACTGGAGTCGGTTTCTTaGAATACTGCTATCATCAGACTCTGTATCTTCAGA +
Preference number: 6 (lower is better)
Translates to: LWHNHNRLESVS*NTAIIRLCIFR
Trigger: TCTGAAGATACAGAGTCTGATGATAGCAGTATTCCAAGAAACCGACTCCAGTCTGTTGTGGTTGTGCCAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS CCA 72 bp GGCAAAGTAGAATTCTTTGGCACAACCACAACAGACTaGAGTCGGTTTCTTGGAATACTGCTATCATCAGAC +
Preference number: 6 (lower is better)
Translates to: GKVEFFGTTTTD*SRFLGILLSSD
Trigger: GTCTGATGATAGCAGTATTCCAAGAAACCGACTCCAGTCTGTTGTGGTTGTGCCAAAGAATTCTACTTTGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS CAA 72 bp GTGCCTTTGGGCAAAAATCGACTTGAAGCAACACCTTaGAACACTGGTCCTTTGATGAAACCTGTTTTCTGC +
Preference number: 6 (lower is better)
Translates to: VPLGKNRLEATP*NTGPLMKPVFC
Trigger: GCAGAAAACAGGTTTCATCAAAGGACCAGTGTTCAAAGGTGTTGCTTCAAGTCGATTTTTGCCCAAAGGCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000153838.8
CDS CAA 90 bp TCTGAGTGCCGGTCTGTCGGCTCCCTATTATCACATATAACTGTCTaGGATTCCAAATGCACATTCACAAAGCTATGTGAAGAAATCGTC +
Preference number: 6 (lower is better)
Translates to: SECRSVGSLLSHITV*DSKCTFTKLCEEIV
Trigger: GACGATTTCTTCACATAGCTTTGTGAATGTGCATTTGGAATCCAAGACAGTTATATGTGATAATAGGGAGCCGACAGACCGGCACTCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS TCA 72 bp CCTCTTCTCTCATGCAATATGGAATTCCCTTCTTCTTaGGCCTCTTGCAAAGACTGCCCAGATAACACATTA +
Preference number: 6 (lower is better)
Translates to: PLLSCNMEFPSS*ASCKDCPDNTL
Trigger: TAATGTGTTATCTGGGCAGTCTTTGCAAGAGGCTCAAGAAGAAGGGAATTCCATATTGCATGAGAGAAGAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS TCA 72 bp GTCAGGCAGGTGATTATCTGCTTTCCTGCCAAACTGTaGATAACAACTTTCTGCACTTCTCTCTGTTCCTTT +
Preference number: 6 (lower is better)
Translates to: VRQVIICFPAKL*ITTFCTSLCSF
Trigger: AAAGGAACAGAGAGAAGTGCAGAAAGTTGTTATTCACAGTTTGGCAGGAAAGCAGATAATCACCTGCCTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS CCA 72 bp CTTTACTCTCATACTCTTCCTCATATGCATGTCTCCTaGTCTCTAATCCATCTTCCCAGCGGTCAGAATAAT +
Preference number: 6 (lower is better)
Translates to: LYSHTLPHMHVS*SLIHLPSGQNN
Trigger: ATTATTCTGACCGCTGGGAAGATGGATTAGAGACCAGGAGACATGCATATGAGGAAGAGTATGAGAGTAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS CAA 72 bp CCCTGTTCCTCCAAATTAACTTTTGTCTTCGTGCCTTaGGGCAAAAATCGACTTGAAGCAACACCTTTGAAC +
Preference number: 6 (lower is better)
Translates to: PCSSKLTFVFVP*GKNRLEATPLN
Trigger: GTTCAAAGGTGTTGCTTCAAGTCGATTTTTGCCCAAAGGCACGAAGACAAAAGTTAATTTGGAGGAACAGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000153838.8
CDS CAA 72 bp ACGATTAAGGCAATCTTCTCCACATGCTACTTCACCTaGAGCTCTTTCATCCTTAGAAAGAGGTGTACACTC +
Preference number: 6 (lower is better)
Translates to: TIKAIFSTCYFT*SSFILRKRCTL
Trigger: GAGTGTACACCTCTTTCTAAGGATGAAAGAGCTCAAGGTGAAGTAGCATGTGGAGAAGATTGCCTTAATCGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
ENSMUST00000198823.2
CDS CAA 90 bp CGGACCGACATCGGGAAGATACATACCGAGTATCTCGTTCAAGTTTaGAGTAGCTACAATATCTATCATCTCTCTCTGTTTTCGATCTTG +
Preference number: 6 (lower is better)
Translates to: RTDIGKIHTEYLVQV*SSYNIYHLSLFSIL
Trigger: CAAGATCGAAAACAGAGAGAGATGATAGATATTGTAGCTACTCAAAACTTGAACGAGATACTCGGTATGTATCTTCCCGATGTCGGTCCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS CAA 90 bp GGAATCCGATACACCTCCTTTAGATCTTTCCAACTGTCTAGTAACTaGGTAGCCAAATCACTTATATCCACTGTTTTATCTGGTGGCTCC +
Preference number: 6 (lower is better)
Translates to: GIRYTSFRSFQLSSN*VAKSLISTVLSGGS
Trigger: GGAGCCACCAGATAAAACAGTGGATATAAGTGATTTGGCTACCAAGTTACTAGACAGTTGGAAAGATCTAAAGGAGGTGTATCGGATTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5
CDS CAA 90 bp GTTTGGTTCACAGCTATGATTCATGAAACGAGAGCAATTCCCTTTTaGAGTGGCATCTATTATACTGCTCACCTCGTCATTTTTCAGGGC +
Preference number: 6 (lower is better)
Translates to: VWFTAMIHETRAIPF*SGIYYTAHLVIFQG
Trigger: GCCCTGAAAAATGACGAGGTGAGCAGTATAATAGATGCCACTCAAAAAGGGAATTGCTCTCGTTTCATGAATCATAGCTGTGAACCAAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000198823.2
CDS TCA 72 bp AACTTTTGTCTTCGTGCCTTTGGGCAAAAATCGACTTaGAGCAACACCTTTGAACACTGGTCCTTTGATGAA +
Preference number: 6 (lower is better)
Translates to: NFCLRAFGQKST*SNTFEHWSFDE
Trigger: TTCATCAAAGGACCAGTGTTCAAAGGTGTTGCTTCAAGTCGATTTTTGCCCAAAGGCACGAAGACAAAAGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000153838.8
CDS TCA 72 bp CATTCTGAAATCCATTTGATGAAAGCATGCAAGCCTTaGTCAAAGGGGATACCTCTGATCCAGTCACACTAT +
Preference number: 6 (lower is better)
Translates to: HSEIHLMKACKP*SKGIPLIQSHY
Trigger: ATAGTGTGACTGGATCAGAGGTATCCCCTTTGATCAAGGCTTGCATGCTTTCATCAAATGGATTTCAGAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS GCA 72 bp ATGCTCTGCTTATATTCATCACATGTATTCTCTGAGTaGCGGTCTGTCGGCTCCCTATTATCACATATAACT +
Preference number: 6 (lower is better)
Translates to: MLCLYSSHVFSE*RSVGSLLSHIT
Trigger: AGTTATATGTGATAATAGGGAGCCGACAGACCGGCACTCAGAGAATACATGTGATGAATATAAGCAGAGCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS GCA 72 bp CTACTACTATCTGGCCGATTAGAGAAAATCATCTGCTaGCGAGACTTATTTGGGAGATCTTCAAAATCGTCA +
Preference number: 6 (lower is better)
Translates to: LLLSGRLEKIIC*RDLFGRSSKSS
Trigger: TGACGATTTTGAAGATCTCCCAAATAAGTCTCGGCAGCAGATGATTTTCTCTAATCGGCCAGATAGTAGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS GCA 72 bp AGTCTACTACTATCTGGCCGATTAGAGAAAATCATCTaGTGCCGAGACTTATTTGGGAGATCTTCAAAATCG +
Preference number: 6 (lower is better)
Translates to: SLLLSGRLEKII*CRDLFGRSSKS
Trigger: CGATTTTGAAGATCTCCCAAATAAGTCTCGGCAGCAGATGATTTTCTCTAATCGGCCAGATAGTAGTAGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS GCA 72 bp AATCATGAGGAGACGATTAAGGCAATCTTCTCCACATaGTACTTCACCTTGAGCTCTTTCATCCTTAGAAAG +
Preference number: 6 (lower is better)
Translates to: NHEETIKAIFST*YFTLSSFILRK
Trigger: CTTTCTAAGGATGAAAGAGCTCAAGGTGAAGTAGCATGTGGAGAAGATTGCCTTAATCGTCTCCTCATGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
ENSMUST00000198823.2
CDS GCA 72 bp CAGGGCCATGAAGTAGTAGTGGATGTTTTTGTTCCGTaGATATTCTTTCACCCGAGCTTTAAACTCTTTATG +
Preference number: 6 (lower is better)
Translates to: QGHEVVVDVFVP*IFFHPSFKLFM
Trigger: CATAAAGAGTTTAAAGCTCGGGTGAAAGAATATGCACGGAACAAAAACATCCACTACTACTTCATGGCCCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000198823.2
CDS CAA 72 bp CGGTCTGTCGGCTCCCTATTATCACATATAACTGTCTaGGATTCCAAATGCACATTCACAAAGCTATGTGAA +
Preference number: 6 (lower is better)
Translates to: RSVGSLLSHITV*DSKCTFTKLCE
Trigger: TTCACATAGCTTTGTGAATGTGCATTTGGAATCCAAGACAGTTATATGTGATAATAGGGAGCCGACAGACCG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS CAA 72 bp GTAATTATGGGTCCCACCATAGTGTTCAGTACTTTGTaGATACTTATGTGTACCACAGGTTCCATAGCTGCT +
Preference number: 6 (lower is better)
Translates to: VIMGPTIVFSTL*ILMCTTGSIAA
Trigger: AGCAGCTATGGAACCTGTGGTACACATAAGTATCAACAAAGTACTGAACACTATGGTGGGACCCATAATTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS CAA 90 bp CTGATCCCTTGTCCTTCTGATGGAAGAAAAATTTATTGGACGGGCTaGAAAAATGTGATCCACTTCGTTGATCCCAATGTTCCTCTTCTT +
Preference number: 6 (lower is better)
Translates to: LIPCPSDGRKIYWTG*KNVIHFVDPNVPLL
Trigger: AAGAAGAGGAACATTGGGATCAACGAAGTGGATCACATTTTTCAAGCCCGTCCAATAAATTTTTCTTCCATCAGAAGGACAAGGGATCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS TCA 72 bp GTAGCGCCGTTCAGAATCATAATAATGAGATCTTTCTaGGCGAGAATAAGACAAACTAGTTCTAGAGGCTCT +
Preference number: 6 (lower is better)
Translates to: VAPFRIIIMRSF*ARIRQTSSRGS
Trigger: AGAGCCTCTAGAACTAGTTTGTCTTATTCTCGCTCAGAAAGATCTCATTATTATGATTCTGAACGGCGCTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS TCA 72 bp ATCAGACTCTGTATCTTCAGAATCACTTTCATCGCTTaGACTTGCAGAAGATCCAGAATAGTCTTCATGGAC +
Preference number: 6 (lower is better)
Translates to: IRLCIFRITFIA*TCRRSRIVFMD
Trigger: GTCCATGAAGACTATTCTGGATCTTCTGCAAGTTCAAGCGATGAAAGTGATTCTGAAGATACAGAGTCTGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS TCA 72 bp GAGTGGCATCTATTATCTCGTCATTTTTCAGGGCCATaGAGTAGTAGTGGATGTTTTTGTTCCGTGCATATT +
Preference number: 6 (lower is better)
Translates to: EWHLLSRHFSGP*SSSGCFCSVHI
Trigger: AATATGCACGGAACAAAAACATCCACTACTACTTCATGGCCCTGAAAAATGACGAGATAATAGATGCCACTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000153838.8
CDS TCA 72 bp CTATTATACTGCTCACCTCGTCATTTTTCAGGGCCATaGAGTAGTAGTGGATGTTTTTGTTCCGTGCATATT +
Preference number: 6 (lower is better)
Translates to: LLYCSPRHFSGP*SSSGCFCSVHI
Trigger: AATATGCACGGAACAAAAACATCCACTACTACTTCATGGCCCTGAAAAATGACGAGGTGAGCAGTATAATAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000198823.2
CDS CAA 72 bp CATCAGACTCTGTATCTTCAGAATCACTTTCATCGCTaGAACTTGCAGAAGATCCAGAATAGTCTTCATGGA +
Preference number: 6 (lower is better)
Translates to: HQTLYLQNHFHR*NLQKIQNSLHG
Trigger: TCCATGAAGACTATTCTGGATCTTCTGCAAGTTCAAGCGATGAAAGTGATTCTGAAGATACAGAGTCTGATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS CAA 72 bp ACAGCTATGATTCATGAAACGAGAGCAATTCCCTTTTaGAGTGGCATCTATTATCTCGTCATTTTTCAGGGC +
Preference number: 6 (lower is better)
Translates to: TAMIHETRAIPF*SGIYYLVIFQG
Trigger: GCCCTGAAAAATGACGAGATAATAGATGCCACTCAAAAAGGGAATTGCTCTCGTTTCATGAATCATAGCTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000153838.8
CDS CAA 72 bp ACAGCTATGATTCATGAAACGAGAGCAATTCCCTTTTaGAGTGGCATCTATTATACTGCTCACCTCGTCATT +
Preference number: 6 (lower is better)
Translates to: TAMIHETRAIPF*SGIYYTAHLVI
Trigger: AATGACGAGGTGAGCAGTATAATAGATGCCACTCAAAAAGGGAATTGCTCTCGTTTCATGAATCATAGCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000198823.2
CDS CAA 72 bp TGTCCTTCTGATGGAAGAAAAATTTATTGGACGGGCTaGAAAAATGTGATCCACTTCGTTGATCCCAATGTT +
Preference number: 6 (lower is better)
Translates to: CPSDGRKIYWTG*KNVIHFVDPNV
Trigger: AACATTGGGATCAACGAAGTGGATCACATTTTTCAAGCCCGTCCAATAAATTTTTCTTCCATCAGAAGGACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS CAA 90 bp TTCCTTCCCAATATGGGAATCTTCTTTTTGCAGGAGATGATCTGCTaGTTCCTTCAAAGTTTGAACTGTGTGTTCTTCCAAACTATTAGA +
Preference number: 6 (lower is better)
Translates to: FLPNMGIFFLQEMIC*FLQSLNCVFFQTIR
Trigger: TCTAATAGTTTGGAAGAACACACAGTTCAAACTTTGAAGGAACAAGCAGATCATCTCCTGCAAAAAGAAGATTCCCATATTGGGAAGGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000153838.8
CDS GCA 72 bp ACTGTGTGTTCTTCCAAACTATTAGATACAATATCTTaGTTTGTATCCACCTCTAAAACTTCGGGTCCACTT +
Preference number: 6 (lower is better)
Translates to: TVCSSKLLDTIS*FVSTSKTSGPL
Trigger: AAGTGGACCCGAAGTTTTAGAGGTGGATACAAAGCAAGATATTGTATCTAATAGTTTGGAAGAACACACAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000153838.8
CDS CAA 72 bp ATCGGGAAGATACATACCGAGTATCTCGTTCAAGTTTaGAGTAGCTACAATATCTATCATCTCTCTCTGTTT +
Preference number: 6 (lower is better)
Translates to: IGKIHTEYLVQV*SSYNIYHLSLF
Trigger: AAACAGAGAGAGATGATAGATATTGTAGCTACTCAAAACTTGAACGAGATACTCGGTATGTATCTTCCCGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000196814.5
CDS CAA 72 bp TACACCTCCTTTAGATCTTTCCAACTGTCTAGTAACTaGGTAGCCAAATCACTTATATCCACTGTTTTATCT +
Preference number: 6 (lower is better)
Translates to: YTSFRSFQLSSN*VAKSLISTVLS
Trigger: AGATAAAACAGTGGATATAAGTGATTTGGCTACCAAGTTACTAGACAGTTGGAAAGATCTAAAGGAGGTGTA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000153838.8
ENSMUST00000200460.5