RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SETD1A (Mus musculus)

Ensembl gene IDs: ENSMUSG00000042308

Ensembl transcript IDs: ENSMUST00000047075.14, ENSMUST00000047157.13, ENSMUST00000126761.8, ENSMUST00000143951.2, ENSMUST00000144406.8

Found 440 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCCAGAGCCCTGAGACACCAGGGTGGGAGGGTGACCCACAGGGTCTaGCAGGAACAGATGAGGCAGGGTTCCAGGCACAGAGTTCCCAGG +
Preference number: 1 (lower is better)
Translates to: ARALRHQGGRVTHRV*QEQMRQGSRHRVPR
Trigger: CCTGGGAACTCTGTGCCTGGAACCCTGCCTCATCTGTTCCTGCCAGACCCTGTGGGTCACCCTCCCACCCTGGTGTCTCAGGGCTCTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
3UTR CCA 90 bp CATAGGGGAGGCAGCAGATGCCTCAAAGGACTGAGGCTCCCTTGTTaGCCTCAGTGCTCCCTATCCCACGTGAAGGTGGGGGCAGTGGGC +
Preference number: 1 (lower is better)
Translates to: HRGGSRCLKGLRLPC*PQCSLSHVKVGAVG
Trigger: GCCCACTGCCCCCACCTTCACGTGGGATAGGGAGCACTGAGGCCAACAAGGGAGCCTCAGTCCTTTGAGGCATCTGCTGCCTCCCCTATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
3UTR CCA 90 bp GAAGCAAAGGGCTATGCAGCCCCCAAGAATAGCATCTATACAGGCTaGTACCCCAGGTTTCCACAGGAAACAGCTGCTGGCAGCTACAAA +
Preference number: 1 (lower is better)
Translates to: EAKGYAAPKNSIYTG*YPRFPQETAAGSYK
Trigger: TTTGTAGCTGCCAGCAGCTGTTTCCTGTGGAAACCTGGGGTACCAGCCTGTATAGATGCTATTCTTGGGGGCTGCATAGCCCTTTGCTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
3UTR-3UTR GCA 90 bp CCAAGAATAGCATCTATACAGGCTGGTACCCCAGGTTTCCACAGGAAACAGCTGCCAATAAGGCTGGGGTaGTGGGAGCTTAGGGCACCA +
Preference number: 2 (lower is better)
Translates to: PRIASIQAGTPGFHRKQLPIRLG*WELRAP
Trigger: TGGTGCCCTAAGCTCCCAGCACCCCAGCCTTATTGG...CAGCTGTTTCCTGTGGAAACCTGGGGTACCAGCCTGTATAGATGCTATTCTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
3UTR-3UTR GCA 90 bp CATGAAGCAAAGGGCTATGCAGCCCCCAAGAATAGCATCTATACAGGCTGGTACAGGGGAGGCAGCAGATaGCTCAAAGGACTGAGGCTC +
Preference number: 2 (lower is better)
Translates to: HEAKGYAAPKNSIYTGWYRGGSR*LKGLRL
Trigger: GAGCCTCAGTCCTTTGAGGCATCTGCTGCCTCCCCT...GTACCAGCCTGTATAGATGCTATTCTTGGGGGCTGCATAGCCCTTTGCTTCATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
3UTR-3UTR GCA 90 bp TCCACAGGAAACAGCTGCTGGCAGCTACAAAACATTTACAGCTTCTTCTTCGCACCAATAAGGCTGGGGTaGTGGGAGCTTAGGGCACCA +
Preference number: 2 (lower is better)
Translates to: STGNSCWQLQNIYSFFFAPIRLG*WELRAP
Trigger: TGGTGCCCTAAGCTCCCAGCACCCCAGCCTTATTGG...TGCGAAGAAGAAGCTGTAAATGTTTTGTAGCTGCCAGCAGCTGTTTCCTGTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
3UTR-3UTR GCA 90 bp TCCACAGGAAACAGCTGCTGGCAGCTACAAAACATTTACAGCTTCTTCTTCGCAAGGGGAGGCAGCAGATaGCTCAAAGGACTGAGGCTC +
Preference number: 2 (lower is better)
Translates to: STGNSCWQLQNIYSFFFARGGSR*LKGLRL
Trigger: GAGCCTCAGTCCTTTGAGGCATCTGCTGCCTCCCCT...TGCGAAGAAGAAGCTGTAAATGTTTTGTAGCTGCCAGCAGCTGTTTCCTGTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
3UTR-3UTR CCA 90 bp TTTCCACAGGAAACAGCTGCTGGCAGCTACAAAACATTTACAGCTTCTTCTTCGGAGGGTGTTTGGGCATaGGGCATAGGGGAGGCAGCA +
Preference number: 2 (lower is better)
Translates to: FPQETAAGSYKTFTASSSEGVWA*GIGEAA
Trigger: TGCTGCCTCCCCTATGCCCCATGCCCAAACACCCTC...CGAAGAAGAAGCTGTAAATGTTTTGTAGCTGCCAGCAGCTGTTTCCTGTGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
3UTR-3UTR CCA 90 bp AATGTGGTGTTGGGTTTCACTATTAACATTATGTACAATCCAGCCCAACAAGAACCTGAGACACCAGGGTaGGAGGGTGACCCACAGGGT +
Preference number: 2 (lower is better)
Translates to: NVVLGFTINIMYNPAQQEPETPG*EGDPQG
Trigger: ACCCTGTGGGTCACCCTCCCACCCTGGTGTCTCAGG...TTCTTGTTGGGCTGGATTGTACATAATGTTAATAGTGAAACCCAACACCACATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
3UTR-3UTR TCA 90 bp AATGTGGTGTTGGGTTTCACTATTAACATTATGTACAATCCAGCCCAACAAGAAGATGCCTCAAAGGACTaGGGCTCCCTTGTTGGCCTC +
Preference number: 2 (lower is better)
Translates to: NVVLGFTINIMYNPAQQEDASKD*GSLVGL
Trigger: GAGGCCAACAAGGGAGCCTCAGTCCTTTGAGGCATC...TTCTTGTTGGGCTGGATTGTACATAATGTTAATAGTGAAACCCAACACCACATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
3UTR-3UTR CCA 90 bp ATAAAAATGTGGTGTTGGGTTTCACTATTAACATTATGTACAATCCAGCCCAACGAGGGTGTTTGGGCATaGGGCATAGGGGAGGCAGCA +
Preference number: 2 (lower is better)
Translates to: IKMWCWVSLLTLCTIQPNEGVWA*GIGEAA
Trigger: TGCTGCCTCCCCTATGCCCCATGCCCAAACACCCTC...GTTGGGCTGGATTGTACATAATGTTAATAGTGAAACCCAACACCACATTTTTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
3UTR-3UTR CCA 90 bp ATAAAAATGTGGTGTTGGGTTTCACTATTAACATTATGTACAATCCAGCCCAACCAGAGACCCCTAAACTaGGGCGGGGTGCACATAGGG +
Preference number: 2 (lower is better)
Translates to: IKMWCWVSLLTLCTIQPNQRPLN*GGVHIG
Trigger: CCCTATGTGCACCCCGCCCCAGTTTAGGGGTCTCTG...GTTGGGCTGGATTGTACATAATGTTAATAGTGAAACCCAACACCACATTTTTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
3UTR-3UTR TCA 90 bp ATAAAAATGTGGTGTTGGGTTTCACTATTAACATTATGTACAATCCAGCCCAACGATGCCTCAAAGGACTaGGGCTCCCTTGTTGGCCTC +
Preference number: 2 (lower is better)
Translates to: IKMWCWVSLLTLCTIQPNDASKD*GSLVGL
Trigger: GAGGCCAACAAGGGAGCCTCAGTCCTTTGAGGCATC...GTTGGGCTGGATTGTACATAATGTTAATAGTGAAACCCAACACCACATTTTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
3UTR-3UTR GCA 90 bp ATAAAAATGTGGTGTTGGGTTTCACTATTAACATTATGTACAATCCAGCCCAACTCCACAGGAAACAGCTaGTGGCAGCTACAAAACATT +
Preference number: 2 (lower is better)
Translates to: IKMWCWVSLLTLCTIQPNSTGNS*WQLQNI
Trigger: AATGTTTTGTAGCTGCCAGCAGCTGTTTCCTGTGGA...GTTGGGCTGGATTGTACATAATGTTAATAGTGAAACCCAACACCACATTTTTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
3UTR CCA 72 bp CTGAGACACCAGGGTGGGAGGGTGACCCACAGGGTCTaGCAGGAACAGATGAGGCAGGGTTCCAGGCACAGA +
Preference number: 3 (lower is better)
Translates to: LRHQGGRVTHRV*QEQMRQGSRHR
Trigger: TCTGTGCCTGGAACCCTGCCTCATCTGTTCCTGCCAGACCCTGTGGGTCACCCTCCCACCCTGGTGTCTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
3UTR TCA 72 bp TGGGGCATAGGGGAGGCAGCAGATGCCTCAAAGGACTaGGGCTCCCTTGTTGGCCTCAGTGCTCCCTATCCC +
Preference number: 3 (lower is better)
Translates to: WGIGEAADASKD*GSLVGLSAPYP
Trigger: GGGATAGGGAGCACTGAGGCCAACAAGGGAGCCTCAGTCCTTTGAGGCATCTGCTGCCTCCCCTATGCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
3UTR CCA 72 bp GGCAGCAGATGCCTCAAAGGACTGAGGCTCCCTTGTTaGCCTCAGTGCTCCCTATCCCACGTGAAGGTGGGG +
Preference number: 3 (lower is better)
Translates to: GSRCLKGLRLPC*PQCSLSHVKVG
Trigger: CCCCACCTTCACGTGGGATAGGGAGCACTGAGGCCAACAAGGGAGCCTCAGTCCTTTGAGGCATCTGCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
3UTR-3UTR CAA 90 bp CCACAGGGTCTGGCAGGAACAGATGAGGCAGGGTTCCAGGCACAGAGTTCCCAGAAATTAAGAGGGTGTTaGGGCATGGGGCATAGGGGA +
Preference number: 3 (lower is better)
Translates to: PQGLAGTDEAGFQAQSSQKLRGC*GMGHRG
Trigger: TCCCCTATGCCCCATGCCCAAACACCCTCTTAATTT...CTGGGAACTCTGTGCCTGGAACCCTGCCTCATCTGTTCCTGCCAGACCCTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
3UTR CCA 72 bp GGCTATGCAGCCCCCAAGAATAGCATCTATACAGGCTaGTACCCCAGGTTTCCACAGGAAACAGCTGCTGGC +
Preference number: 3 (lower is better)
Translates to: GYAAPKNSIYTG*YPRFPQETAAG
Trigger: GCCAGCAGCTGTTTCCTGTGGAAACCTGGGGTACCAGCCTGTATAGATGCTATTCTTGGGGGCTGCATAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
3UTR-3UTR CAA 90 bp CATGAAGCAAAGGGCTATGCAGCCCCCAAGAATAGCATCTATACAGGCTGGTACAGGACTGAGGCTCCCTaGTTGGCCTCAGTGCTCCCT +
Preference number: 3 (lower is better)
Translates to: HEAKGYAAPKNSIYTGWYRTEAP*LASVLP
Trigger: AGGGAGCACTGAGGCCAACAAGGGAGCCTCAGTCCT...GTACCAGCCTGTATAGATGCTATTCTTGGGGGCTGCATAGCCCTTTGCTTCATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
3UTR-3UTR CAA 90 bp CCAAGAATAGCATCTATACAGGCTGGTACCCCAGGTTTCCACAGGAAACAGCTGACTGAGGCTCCCTTGTaGGCCTCAGTGCTCCCTATC +
Preference number: 3 (lower is better)
Translates to: PRIASIQAGTPGFHRKQLTEAPL*ASVLPI
Trigger: GATAGGGAGCACTGAGGCCAACAAGGGAGCCTCAGT...CAGCTGTTTCCTGTGGAAACCTGGGGTACCAGCCTGTATAGATGCTATTCTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
3UTR GCA 72 bp TACAGGCTGGTACCCCAGGTTTCCACAGGAAACAGCTaGTGGCAGCTACAAAACATTTACAGCTTCTTCTTC +
Preference number: 3 (lower is better)
Translates to: YRLVPQVSTGNS*WQLQNIYSFFF
Trigger: GAAGAAGAAGCTGTAAATGTTTTGTAGCTGCCAGCAGCTGTTTCCTGTGGAAACCTGGGGTACCAGCCTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
3UTR-3UTR CAA 90 bp AATGTGGTGTTGGGTTTCACTATTAACATTATGTACAATCCAGCCCAACAAGAAAGGACTGAGGCTCCCTaGTTGGCCTCAGTGCTCCCT +
Preference number: 3 (lower is better)
Translates to: NVVLGFTINIMYNPAQQERTEAP*LASVLP
Trigger: AGGGAGCACTGAGGCCAACAAGGGAGCCTCAGTCCT...TTCTTGTTGGGCTGGATTGTACATAATGTTAATAGTGAAACCCAACACCACATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
3UTR-3UTR CAA 90 bp AATGTGGTGTTGGGTTTCACTATTAACATTATGTACAATCCAGCCCAACAAGAAACTGAGGCTCCCTTGTaGGCCTCAGTGCTCCCTATC +
Preference number: 3 (lower is better)
Translates to: NVVLGFTINIMYNPAQQETEAPL*ASVLPI
Trigger: GATAGGGAGCACTGAGGCCAACAAGGGAGCCTCAGT...TTCTTGTTGGGCTGGATTGTACATAATGTTAATAGTGAAACCCAACACCACATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CCA 90 bp AGGCTCCCTTGTTGGCCTCAGTGCTCCCTATCCCACGTGAAGGTGGGGGCAGTGCAACCCACGTCGGGCTaGGGTCAGGGCCAGGTCAGC +
Preference number: 4 (lower is better)
Translates to: RLPCWPQCSLSHVKVGAVQPTSG*GQGQVS
Trigger: GCTGACCTGGCCCTGACCCCAGCCCGACGTGGGTTG...CACTGCCCCCACCTTCACGTGGGATAGGGAGCACTGAGGCCAACAAGGGAGCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CCA 90 bp AGGCTCCCTTGTTGGCCTCAGTGCTCCCTATCCCACGTGAAGGTGGGGGCAGTGAGCAAGGGCAGGAGCTaGCTCCAGGGGCCGAGGTGC +
Preference number: 4 (lower is better)
Translates to: RLPCWPQCSLSHVKVGAVSKGRS*LQGPRC
Trigger: GCACCTCGGCCCCTGGAGCCAGCTCCTGCCCTTGCT...CACTGCCCCCACCTTCACGTGGGATAGGGAGCACTGAGGCCAACAAGGGAGCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR TCA 90 bp AGGCTCCCTTGTTGGCCTCAGTGCTCCCTATCCCACGTGAAGGTGGGGGCAGTGTCCATTGGCCTTTGGTaGCTCCCGGGCAGCCCCTGG +
Preference number: 4 (lower is better)
Translates to: RLPCWPQCSLSHVKVGAVSIGLW*LPGSPW
Trigger: CCAGGGGCTGCCCGGGAGTCACCAAAGGCCAATGGA...CACTGCCCCCACCTTCACGTGGGATAGGGAGCACTGAGGCCAACAAGGGAGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR TCA 90 bp AGGCTCCCTTGTTGGCCTCAGTGCTCCCTATCCCACGTGAAGGTGGGGGCAGTGCTCCTCTCCCGAGACTaGGGAAGAGGGCAGGGGCTC +
Preference number: 4 (lower is better)
Translates to: RLPCWPQCSLSHVKVGAVLLSRD*GRGQGL
Trigger: GAGCCCCTGCCCTCTTCCTCAGTCTCGGGAGAGGAG...CACTGCCCCCACCTTCACGTGGGATAGGGAGCACTGAGGCCAACAAGGGAGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR GCA 90 bp CCACAGGGTCTGGCAGGAACAGATGAGGCAGGGTTCCAGGCACAGAGTTCCCAGGGGCAGGGGCTCGGCTaGCATAGGCAAGGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: PQGLAGTDEAGFQAQSSQGQGLG*HRQGQV
Trigger: CACCTGCCCTTGCCTATGGCAGCCGAGCCCCTGCCC...CTGGGAACTCTGTGCCTGGAACCCTGCCTCATCTGTTCCTGCCAGACCCTGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CCA 90 bp AGGCTCCCTTGTTGGCCTCAGTGCTCCCTATCCCACGTGAAGGTGGGGGCAGTGCTTCTCTCTCAGGGCTaGGTGCCCCACCACCACCAC +
Preference number: 4 (lower is better)
Translates to: RLPCWPQCSLSHVKVGAVLLSQG*VPHHHH
Trigger: GTGGTGGTGGTGGGGCACCCAGCCCTGAGAGAGAAG...CACTGCCCCCACCTTCACGTGGGATAGGGAGCACTGAGGCCAACAAGGGAGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CCA 90 bp AGGCTCCCTTGTTGGCCTCAGTGCTCCCTATCCCACGTGAAGGTGGGGGCAGTGGCACACTCTCGTTGGTaGTCTCTGGGGCTGGGGAGC +
Preference number: 4 (lower is better)
Translates to: RLPCWPQCSLSHVKVGAVAHSRW*SLGLGS
Trigger: GCTCCCCAGCCCCAGAGACCACCAACGAGAGTGTGC...CACTGCCCCCACCTTCACGTGGGATAGGGAGCACTGAGGCCAACAAGGGAGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CCA 90 bp AGGCTCCCTTGTTGGCCTCAGTGCTCCCTATCCCACGTGAAGGTGGGGGCAGTGCGGAGGCTTGGTCCCTaGACGTCCTGGTTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: RLPCWPQCSLSHVKVGAVRRLGP*TSWFSS
Trigger: GCTGGAGAACCAGGACGTCCAGGGACCAAGCCTCCG...CACTGCCCCCACCTTCACGTGGGATAGGGAGCACTGAGGCCAACAAGGGAGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CCA 90 bp AGGCTCCCTTGTTGGCCTCAGTGCTCCCTATCCCACGTGAAGGTGGGGGCAGTGACCACCACCAGGTTCTaGAGGTTCTGGAGGTGGGGC +
Preference number: 4 (lower is better)
Translates to: RLPCWPQCSLSHVKVGAVTTTRF*RFWRWG
Trigger: GCCCCACCTCCAGAACCTCCAGAACCTGGTGGTGGT...CACTGCCCCCACCTTCACGTGGGATAGGGAGCACTGAGGCCAACAAGGGAGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR TCA 90 bp CATCTATACAGGCTGGTACCCCAGGTTTCCACAGGAAACAGCTGCTGGCAGCTACGCCCCGAGTGCTGGTaGAGAGCACACGGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: HLYRLVPQVSTGNSCWQLRPECW*RAHGPG
Trigger: GCCTGGCCCGTGTGCTCTTCACCAGCACTCGGGGCG...TAGCTGCCAGCAGCTGTTTCCTGTGGAAACCTGGGGTACCAGCCTGTATAGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR GCA 90 bp AGGCTCCCTTGTTGGCCTCAGTGCTCCCTATCCCACGTGAAGGTGGGGGCAGTGCCTTCCTGCTCTGGATaGTGCTGCTGCAGCTGTTGC +
Preference number: 4 (lower is better)
Translates to: RLPCWPQCSLSHVKVGAVPSCSG*CCCSCC
Trigger: GCAACAGCTGCAGCAGCAGCATCCAGAGCAGGAAGG...CACTGCCCCCACCTTCACGTGGGATAGGGAGCACTGAGGCCAACAAGGGAGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR GCA 90 bp CCACAGGGTCTGGCAGGAACAGATGAGGCAGGGTTCCAGGCACAGAGTTCCCAGGGTAGCTGCTGCCAATaGCCTCCTGCACGTAGCGCT +
Preference number: 4 (lower is better)
Translates to: PQGLAGTDEAGFQAQSSQGSCCQ*PPARSA
Trigger: AGCGCTACGTGCAGGAGGGCATTGGCAGCAGCTACC...CTGGGAACTCTGTGCCTGGAACCCTGCCTCATCTGTTCCTGCCAGACCCTGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CCA 90 bp CCACAGGGTCTGGCAGGAACAGATGAGGCAGGGTTCCAGGCACAGAGTTCCCAGCTCGCTTCGGAGGCTTaGTCCCTGGACGTCCTGGTT +
Preference number: 4 (lower is better)
Translates to: PQGLAGTDEAGFQAQSSQLASEA*SLDVLV
Trigger: AACCAGGACGTCCAGGGACCAAGCCTCCGAAGCGAG...CTGGGAACTCTGTGCCTGGAACCCTGCCTCATCTGTTCCTGCCAGACCCTGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CCA 90 bp AGCATCTATACAGGCTGGTACCCCAGGTTTCCACAGGAAACAGCTGCTGGCAGCAGCAAGGGCAGGAGCTaGCTCCAGGGGCCGAGGTGC +
Preference number: 4 (lower is better)
Translates to: SIYTGWYPRFPQETAAGSSKGRS*LQGPRC
Trigger: GCACCTCGGCCCCTGGAGCCAGCTCCTGCCCTTGCT...GCTGCCAGCAGCTGTTTCCTGTGGAAACCTGGGGTACCAGCCTGTATAGATGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CCA 90 bp CCACAGGGTCTGGCAGGAACAGATGAGGCAGGGTTCCAGGCACAGAGTTCCCAGGCCAGTCAGCGCCACTaGTTTGCTGCAGCAGCCGTT +
Preference number: 4 (lower is better)
Translates to: PQGLAGTDEAGFQAQSSQASQRH*FAAAAV
Trigger: AACGGCTGCTGCAGCAAACCAGTGGCGCTGACTGGC...CTGGGAACTCTGTGCCTGGAACCCTGCCTCATCTGTTCCTGCCAGACCCTGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR TCA 90 bp CCACAGGGTCTGGCAGGAACAGATGAGGCAGGGTTCCAGGCACAGAGTTCCCAGGTTCCTTGGGAGGACTaGGGGGTGAACTGGCCAAAG +
Preference number: 4 (lower is better)
Translates to: PQGLAGTDEAGFQAQSSQVPWED*GVNWPK
Trigger: CTTTGGCCAGTTCACCCCTCAGTCCTCCCAAGGAAC...CTGGGAACTCTGTGCCTGGAACCCTGCCTCATCTGTTCCTGCCAGACCCTGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR TCA 90 bp AGGCTCCCTTGTTGGCCTCAGTGCTCCCTATCCCACGTGAAGGTGGGGGCAGTGATCCTCATCCTTCTCTaGGGAAGACTCCTGGGACGC +
Preference number: 4 (lower is better)
Translates to: RLPCWPQCSLSHVKVGAVILILL*GRLLGR
Trigger: GCGTCCCAGGAGTCTTCCTCAGAGAAGGATGAGGAT...CACTGCCCCCACCTTCACGTGGGATAGGGAGCACTGAGGCCAACAAGGGAGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR GCA 90 bp CATCTATACAGGCTGGTACCCCAGGTTTCCACAGGAAACAGCTGCTGGCAGCTAGGGCAGGGGCTCGGCTaGCATAGGCAAGGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: HLYRLVPQVSTGNSCWQLGQGLG*HRQGQV
Trigger: CACCTGCCCTTGCCTATGGCAGCCGAGCCCCTGCCC...TAGCTGCCAGCAGCTGTTTCCTGTGGAAACCTGGGGTACCAGCCTGTATAGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR GCA 90 bp AGGCTCCCTTGTTGGCCTCAGTGCTCCCTATCCCACGTGAAGGTGGGGGCAGTGAGGTTCTGGGACTGGTaGCTCCTCTGCAGCAGAGAA +
Preference number: 4 (lower is better)
Translates to: RLPCWPQCSLSHVKVGAVRFWDW*LLCSRE
Trigger: TTCTCTGCTGCAGAGGAGGCACCAGTCCCAGAACCT...CACTGCCCCCACCTTCACGTGGGATAGGGAGCACTGAGGCCAACAAGGGAGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR GCA 90 bp CCACAGGGTCTGGCAGGAACAGATGAGGCAGGGTTCCAGGCACAGAGTTCCCAGTGGAGAGCTGAAGAGTaGAGCAAGGGCAGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: PQGLAGTDEAGFQAQSSQWRAEE*SKGRSW
Trigger: CCAGCTCCTGCCCTTGCTGCACTCTTCAGCTCTCCA...CTGGGAACTCTGTGCCTGGAACCCTGCCTCATCTGTTCCTGCCAGACCCTGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CCA 90 bp AGGCTCCCTTGTTGGCCTCAGTGCTCCCTATCCCACGTGAAGGTGGGGGCAGTGCACAGTAGTGCCTGCTaGATAGGCAGCTGTGTCCGA +
Preference number: 4 (lower is better)
Translates to: RLPCWPQCSLSHVKVGAVHSSAC*IGSCVR
Trigger: TCGGACACAGCTGCCTATCCAGCAGGCACTACTGTG...CACTGCCCCCACCTTCACGTGGGATAGGGAGCACTGAGGCCAACAAGGGAGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CCA 90 bp CATGAAGCAAAGGGCTATGCAGCCCCCAAGAATAGCATCTATACAGGCTGGTACGCGTGCAGGGGAAGCTaGGCGTGGGGGAGTCCGGGC +
Preference number: 4 (lower is better)
Translates to: HEAKGYAAPKNSIYTGWYACRGS*AWGSPG
Trigger: GCCCGGACTCCCCCACGCCCAGCTTCCCCTGCACGC...GTACCAGCCTGTATAGATGCTATTCTTGGGGGCTGCATAGCCCTTTGCTTCATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CCA 90 bp AGGCTCCCTTGTTGGCCTCAGTGCTCCCTATCCCACGTGAAGGTGGGGGCAGTGTTTTCCGGCGTTTCTTaGGTGGGGGTAGGAGAGGGA +
Preference number: 4 (lower is better)
Translates to: RLPCWPQCSLSHVKVGAVFSGVS*VGVGEG
Trigger: TCCCTCTCCTACCCCCACCCAAGAAACGCCGGAAAA...CACTGCCCCCACCTTCACGTGGGATAGGGAGCACTGAGGCCAACAAGGGAGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CCA 90 bp CATCTATACAGGCTGGTACCCCAGGTTTCCACAGGAAACAGCTGCTGGCAGCTACAACCCACGTCGGGCTaGGGTCAGGGCCAGGTCAGC +
Preference number: 4 (lower is better)
Translates to: HLYRLVPQVSTGNSCWQLQPTSG*GQGQVS
Trigger: GCTGACCTGGCCCTGACCCCAGCCCGACGTGGGTTG...TAGCTGCCAGCAGCTGTTTCCTGTGGAAACCTGGGGTACCAGCCTGTATAGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR TCA 90 bp CCACAGGGTCTGGCAGGAACAGATGAGGCAGGGTTCCAGGCACAGAGTTCCCAGATCCTCATCCTTCTCTaGGGAAGACTCCTGGGACGC +
Preference number: 4 (lower is better)
Translates to: PQGLAGTDEAGFQAQSSQILILL*GRLLGR
Trigger: GCGTCCCAGGAGTCTTCCTCAGAGAAGGATGAGGAT...CTGGGAACTCTGTGCCTGGAACCCTGCCTCATCTGTTCCTGCCAGACCCTGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR TCA 90 bp AGGCTCCCTTGTTGGCCTCAGTGCTCCCTATCCCACGTGAAGGTGGGGGCAGTGACTTGGTGGCATCAATaGTGGTGTCGTGATCCACCC +
Preference number: 4 (lower is better)
Translates to: RLPCWPQCSLSHVKVGAVTWWHQ*WCRDPP
Trigger: GGGTGGATCACGACACCATCATTGATGCCACCAAGT...CACTGCCCCCACCTTCACGTGGGATAGGGAGCACTGAGGCCAACAAGGGAGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR GCA 90 bp CCACAGGGTCTGGCAGGAACAGATGAGGCAGGGTTCCAGGCACAGAGTTCCCAGAGTCGTCTCAGCGGCTaGACCAGAACCCTGGAACTT +
Preference number: 4 (lower is better)
Translates to: PQGLAGTDEAGFQAQSSQSRLSG*TRTLEL
Trigger: AAGTTCCAGGGTTCTGGTGCAGCCGCTGAGACGACT...CTGGGAACTCTGTGCCTGGAACCCTGCCTCATCTGTTCCTGCCAGACCCTGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR GCA 90 bp CATGAAGCAAAGGGCTATGCAGCCCCCAAGAATAGCATCTATACAGGCTGGTACCTCCAGGGGCCGAGGTaGTGGTGTGGTAGGCGGGGG +
Preference number: 4 (lower is better)
Translates to: HEAKGYAAPKNSIYTGWYLQGPR*WCGRRG
Trigger: CCCCCGCCTACCACACCAGCACCTCGGCCCCTGGAG...GTACCAGCCTGTATAGATGCTATTCTTGGGGGCTGCATAGCCCTTTGCTTCATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CCA 90 bp CCACAGGGTCTGGCAGGAACAGATGAGGCAGGGTTCCAGGCACAGAGTTCCCAGCCCTGCCGTAACTGGTaGAGCCGTGTTAACATCTGG +
Preference number: 4 (lower is better)
Translates to: PQGLAGTDEAGFQAQSSQPCRNW*SRVNIW
Trigger: CCAGATGTTAACACGGCTCCACCAGTTACGGCAGGG...CTGGGAACTCTGTGCCTGGAACCCTGCCTCATCTGTTCCTGCCAGACCCTGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CCA 90 bp CCACAGGGTCTGGCAGGAACAGATGAGGCAGGGTTCCAGGCACAGAGTTCCCAGTTCATCTTCCTCAGCTaGAGTAGAGGGCCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: PQGLAGTDEAGFQAQSSQFIFLS*SRGPGP
Trigger: AGGCCCAGGCCCTCTACTCCAGCTGAGGAAGATGAA...CTGGGAACTCTGTGCCTGGAACCCTGCCTCATCTGTTCCTGCCAGACCCTGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR TCA 90 bp AGGCTCCCTTGTTGGCCTCAGTGCTCCCTATCCCACGTGAAGGTGGGGGCAGTGAAGCAGGATCCACTATaGGCTTGTAGTTCCGCCACT +
Preference number: 4 (lower is better)
Translates to: RLPCWPQCSLSHVKVGAVKQDPL*ACSSAT
Trigger: AGTGGCGGAACTACAAGCTCATAGTGGATCCTGCTT...CACTGCCCCCACCTTCACGTGGGATAGGGAGCACTGAGGCCAACAAGGGAGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR TCA 90 bp CATCTATACAGGCTGGTACCCCAGGTTTCCACAGGAAACAGCTGCTGGCAGCTAGCTTTGGACCTGACATaGCAGCGGGGGTCCTGGAGG +
Preference number: 4 (lower is better)
Translates to: HLYRLVPQVSTGNSCWQLALDLT*QRGSWR
Trigger: CCTCCAGGACCCCCGCTGTCATGTCAGGTCCAAAGC...TAGCTGCCAGCAGCTGTTTCCTGTGGAAACCTGGGGTACCAGCCTGTATAGATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR TCA 90 bp CCACAGGGTCTGGCAGGAACAGATGAGGCAGGGTTCCAGGCACAGAGTTCCCAGCGTATTTTCGGCAAATaGAGCCCCAGAAGGGTCCTC +
Preference number: 4 (lower is better)
Translates to: PQGLAGTDEAGFQAQSSQRIFGK*SPRRVL
Trigger: GAGGACCCTTCTGGGGCTTCATTTGCCGAAAATACG...CTGGGAACTCTGTGCCTGGAACCCTGCCTCATCTGTTCCTGCCAGACCCTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR TCA 90 bp AGCATCTATACAGGCTGGTACCCCAGGTTTCCACAGGAAACAGCTGCTGGCAGCGCCAGGAGGACCAGCTaGGGCTGCAGTCAATCCCTT +
Preference number: 4 (lower is better)
Translates to: SIYTGWYPRFPQETAAGSARRTS*GCSQSL
Trigger: AAGGGATTGACTGCAGCCTCAGCTGGTCCTCCTGGC...GCTGCCAGCAGCTGTTTCCTGTGGAAACCTGGGGTACCAGCCTGTATAGATGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR GCA 90 bp AGGCTCCCTTGTTGGCCTCAGTGCTCCCTATCCCACGTGAAGGTGGGGGCAGTGCTAGGTGCTTTCGAGTaGGGGGATGAAGAAGGATCT +
Preference number: 4 (lower is better)
Translates to: RLPCWPQCSLSHVKVGAVLGAFE*GDEEGS
Trigger: AGATCCTTCTTCATCCCCGCACTCGAAAGCACCTAG...CACTGCCCCCACCTTCACGTGGGATAGGGAGCACTGAGGCCAACAAGGGAGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR GCA 90 bp AGGCTCCCTTGTTGGCCTCAGTGCTCCCTATCCCACGTGAAGGTGGGGGCAGTGGTTAACATCTGGGTCTaGATCTGGAAGGACATGGGC +
Preference number: 4 (lower is better)
Translates to: RLPCWPQCSLSHVKVGAVVNIWV*IWKDMG
Trigger: GCCCATGTCCTTCCAGATGCAGACCCAGATGTTAAC...CACTGCCCCCACCTTCACGTGGGATAGGGAGCACTGAGGCCAACAAGGGAGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR GCA 90 bp AGGCTCCCTTGTTGGCCTCAGTGCTCCCTATCCCACGTGAAGGTGGGGGCAGTGGCTTTCTGCTATCTCTaGTTCCTCCCTATGAGGCAG +
Preference number: 4 (lower is better)
Translates to: RLPCWPQCSLSHVKVGAVAFCYL*FLPMRQ
Trigger: CTGCCTCATAGGGAGGAAGCAGAGATAGCAGAAAGC...CACTGCCCCCACCTTCACGTGGGATAGGGAGCACTGAGGCCAACAAGGGAGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR GCA 90 bp AGGCTCCCTTGTTGGCCTCAGTGCTCCCTATCCCACGTGAAGGTGGGGGCAGTGTCCTCTTCCTTGGCTTaGTGTTTGGCTGCATTCTGG +
Preference number: 4 (lower is better)
Translates to: RLPCWPQCSLSHVKVGAVSSSLA*CLAAFW
Trigger: CCAGAATGCAGCCAAACAGCAAGCCAAGGAAGAGGA...CACTGCCCCCACCTTCACGTGGGATAGGGAGCACTGAGGCCAACAAGGGAGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR GCA 90 bp CCACAGGGTCTGGCAGGAACAGATGAGGCAGGGTTCCAGGCACAGAGTTCCCAGCACGGCAACTTTCAGTaGCGCACAGACACGGAATCT +
Preference number: 4 (lower is better)
Translates to: PQGLAGTDEAGFQAQSSQHGNFQ*RTDTES
Trigger: AGATTCCGTGTCTGTGCGGCACTGAAAGTTGCCGTG...CTGGGAACTCTGTGCCTGGAACCCTGCCTCATCTGTTCCTGCCAGACCCTGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CCA 90 bp CCACAGGGTCTGGCAGGAACAGATGAGGCAGGGTTCCAGGCACAGAGTTCCCAGTTGAAGTGGTGCTGCTaGAGTAGGCAGAGTCCTGAG +
Preference number: 4 (lower is better)
Translates to: PQGLAGTDEAGFQAQSSQLKWCC*SRQSPE
Trigger: CTCAGGACTCTGCCTACTCCAGCAGCACCACTTCAA...CTGGGAACTCTGTGCCTGGAACCCTGCCTCATCTGTTCCTGCCAGACCCTGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CCA 90 bp CCAAGAATAGCATCTATACAGGCTGGTACCCCAGGTTTCCACAGGAAACAGCTGGGTGGTCTCTGGGGCTaGGGAGCCAGAGCGTGCAGG +
Preference number: 4 (lower is better)
Translates to: PRIASIQAGTPGFHRKQLGGLWG*GARACR
Trigger: CCTGCACGCTCTGGCTCCCCAGCCCCAGAGACCACC...CAGCTGTTTCCTGTGGAAACCTGGGGTACCAGCCTGTATAGATGCTATTCTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CCA 90 bp CATCTATACAGGCTGGTACCCCAGGTTTCCACAGGAAACAGCTGCTGGCAGCTAAGGGCACACTCTCGTTaGTGGTCTCTGGGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: HLYRLVPQVSTGNSCWQLRAHSR*WSLGLG
Trigger: CCCCAGCCCCAGAGACCACCAACGAGAGTGTGCCCT...TAGCTGCCAGCAGCTGTTTCCTGTGGAAACCTGGGGTACCAGCCTGTATAGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CCA 90 bp CCACAGGGTCTGGCAGGAACAGATGAGGCAGGGTTCCAGGCACAGAGTTCCCAGTGCCTCTTGTGGAGGTaGAAAAGGGAGAAAGGCCTC +
Preference number: 4 (lower is better)
Translates to: PQGLAGTDEAGFQAQSSQCLLWR*KREKGL
Trigger: GAGGCCTTTCTCCCTTTTCCACCTCCACAAGAGGCA...CTGGGAACTCTGTGCCTGGAACCCTGCCTCATCTGTTCCTGCCAGACCCTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CCA 90 bp AGGCTCCCTTGTTGGCCTCAGTGCTCCCTATCCCACGTGAAGGTGGGGGCAGTGCCTTGGCTTGCTGTTTaGCTGCATTCTGGAATGGCT +
Preference number: 4 (lower is better)
Translates to: RLPCWPQCSLSHVKVGAVPWLAV*LHSGMA
Trigger: AGCCATTCCAGAATGCAGCCAAACAGCAAGCCAAGG...CACTGCCCCCACCTTCACGTGGGATAGGGAGCACTGAGGCCAACAAGGGAGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CCA 90 bp CCACAGGGTCTGGCAGGAACAGATGAGGCAGGGTTCCAGGCACAGAGTTCCCAGAACAGACCCCACTCATaGATACGGCTCCGGCCAAAT +
Preference number: 4 (lower is better)
Translates to: PQGLAGTDEAGFQAQSSQNRPHS*IRLRPN
Trigger: ATTTGGCCGGAGCCGTATCCATGAGTGGGGTCTGTT...CTGGGAACTCTGTGCCTGGAACCCTGCCTCATCTGTTCCTGCCAGACCCTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR TCA 90 bp AGCATCTATACAGGCTGGTACCCCAGGTTTCCACAGGAAACAGCTGCTGGCAGCGTTCCTTGGGAGGACTaGGGGGTGAACTGGCCAAAG +
Preference number: 4 (lower is better)
Translates to: SIYTGWYPRFPQETAAGSVPWED*GVNWPK
Trigger: CTTTGGCCAGTTCACCCCTCAGTCCTCCCAAGGAAC...GCTGCCAGCAGCTGTTTCCTGTGGAAACCTGGGGTACCAGCCTGTATAGATGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR TCA 90 bp CATGAAGCAAAGGGCTATGCAGCCCCCAAGAATAGCATCTATACAGGCTGGTACCTCCTCTCCCGAGACTaGGGAAGAGGGCAGGGGCTC +
Preference number: 4 (lower is better)
Translates to: HEAKGYAAPKNSIYTGWYLLSRD*GRGQGL
Trigger: GAGCCCCTGCCCTCTTCCTCAGTCTCGGGAGAGGAG...GTACCAGCCTGTATAGATGCTATTCTTGGGGGCTGCATAGCCCTTTGCTTCATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR TCA 90 bp AGCATCTATACAGGCTGGTACCCCAGGTTTCCACAGGAAACAGCTGCTGGCAGCGCTGCTGCTGCTTTCTaGAGACTCGGACTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: SIYTGWYPRFPQETAAGSAAAAF*RLGLLL
Trigger: GAGGAGGAGTCCGAGTCTTCAGAAAGCAGCAGCAGC...GCTGCCAGCAGCTGTTTCCTGTGGAAACCTGGGGTACCAGCCTGTATAGATGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR GCA 90 bp GCACATAGGGCAGAAGGGGAAGTCCCCATTAACATGAAGCAAAGGGCTATGCAGAAGCTCGGGGCTTTCTaGCCGTCTCCCCCACCTTCC +
Preference number: 4 (lower is better)
Translates to: AHRAEGEVPINMKQRAMQKLGAF*PSPPPS
Trigger: GGAAGGTGGGGGAGACGGGCAGAAAGCCCCGAGCTT...CTGCATAGCCCTTTGCTTCATGTTAATGGGGACTTCCCCTTCTGCCCTATGTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR GCA 90 bp CCAAGAATAGCATCTATACAGGCTGGTACCCCAGGTTTCCACAGGAAACAGCTGTCTCTCAGGGCTGGGTaGCCCACCACCACCACCACC +
Preference number: 4 (lower is better)
Translates to: PRIASIQAGTPGFHRKQLSLRAG*PTTTTT
Trigger: GGTGGTGGTGGTGGTGGGGCACCCAGCCCTGAGAGA...CAGCTGTTTCCTGTGGAAACCTGGGGTACCAGCCTGTATAGATGCTATTCTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR GCA 90 bp AGCATCTATACAGGCTGGTACCCCAGGTTTCCACAGGAAACAGCTGCTGGCAGCCCCCAGGGCCTGCACTaGTGTTCTCTTCCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: SIYTGWYPRFPQETAAGSPQGLH*CSLPLP
Trigger: AGGAAGAGGAAGAGAACAGCAGTGCAGGCCCTGGGG...GCTGCCAGCAGCTGTTTCCTGTGGAAACCTGGGGTACCAGCCTGTATAGATGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR GCA 90 bp AGCATCTATACAGGCTGGTACCCCAGGTTTCCACAGGAAACAGCTGCTGGCAGCCCAGAAGACTTGGCCTaGAGTGGGGCAGCTGTGGAA +
Preference number: 4 (lower is better)
Translates to: SIYTGWYPRFPQETAAGSPEDLA*SGAAVE
Trigger: TTCCACAGCTGCCCCACTGCAGGCCAAGTCTTCTGG...GCTGCCAGCAGCTGTTTCCTGTGGAAACCTGGGGTACCAGCCTGTATAGATGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR GCA 90 bp TCCACAGGAAACAGCTGCTGGCAGCTACAAAACATTTACAGCTTCTTCTTCGCACTCCAGGGGCCGAGGTaGTGGTGTGGTAGGCGGGGG +
Preference number: 4 (lower is better)
Translates to: STGNSCWQLQNIYSFFFALQGPR*WCGRRG
Trigger: CCCCCGCCTACCACACCAGCACCTCGGCCCCTGGAG...TGCGAAGAAGAAGCTGTAAATGTTTTGTAGCTGCCAGCAGCTGTTTCCTGTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CCA 90 bp CATCTATACAGGCTGGTACCCCAGGTTTCCACAGGAAACAGCTGCTGGCAGCTAAGGCCTTGCCCCCAGTaGGCACAGTCTGAGGAGTGT +
Preference number: 4 (lower is better)
Translates to: HLYRLVPQVSTGNSCWQLRPCPQ*AQSEEC
Trigger: ACACTCCTCAGACTGTGCCCACTGGGGGCAAGGCCT...TAGCTGCCAGCAGCTGTTTCCTGTGGAAACCTGGGGTACCAGCCTGTATAGATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CCA 90 bp AGCATCTATACAGGCTGGTACCCCAGGTTTCCACAGGAAACAGCTGCTGGCAGCAGTTGCCCGGCGAGGTaGATAGGAAGTATGGCGCTG +
Preference number: 4 (lower is better)
Translates to: SIYTGWYPRFPQETAAGSSCPAR*IGSMAL
Trigger: CAGCGCCATACTTCCTATCCACCTCGCCGGGCAACT...GCTGCCAGCAGCTGTTTCCTGTGGAAACCTGGGGTACCAGCCTGTATAGATGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CCA 90 bp CATCTATACAGGCTGGTACCCCAGGTTTCCACAGGAAACAGCTGCTGGCAGCTAACCACCACCAGGTTCTaGAGGTTCTGGAGGTGGGGC +
Preference number: 4 (lower is better)
Translates to: HLYRLVPQVSTGNSCWQLTTTRF*RFWRWG
Trigger: GCCCCACCTCCAGAACCTCCAGAACCTGGTGGTGGT...TAGCTGCCAGCAGCTGTTTCCTGTGGAAACCTGGGGTACCAGCCTGTATAGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CCA 90 bp GCACATAGGGCAGAAGGGGAAGTCCCCATTAACATGAAGCAAAGGGCTATGCAGCTTCTCTCTCAGGGCTaGGTGCCCCACCACCACCAC +
Preference number: 4 (lower is better)
Translates to: AHRAEGEVPINMKQRAMQLLSQG*VPHHHH
Trigger: GTGGTGGTGGTGGGGCACCCAGCCCTGAGAGAGAAG...CTGCATAGCCCTTTGCTTCATGTTAATGGGGACTTCCCCTTCTGCCCTATGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CCA 90 bp CCCAAGAATAGCATCTATACAGGCTGGTACCCCAGGTTTCCACAGGAAACAGCTCTCGTTGGTGGTCTCTaGGGCTGGGGAGCCAGAGCG +
Preference number: 4 (lower is better)
Translates to: PKNSIYTGWYPRFPQETALVGGL*GWGARA
Trigger: CGCTCTGGCTCCCCAGCCCCAGAGACCACCAACGAG...AGCTGTTTCCTGTGGAAACCTGGGGTACCAGCCTGTATAGATGCTATTCTTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CCA 90 bp GCACATAGGGCAGAAGGGGAAGTCCCCATTAACATGAAGCAAAGGGCTATGCAGTCCATCTGGGCGGGGTaGGAGGAGGTAGGCAGGTTG +
Preference number: 4 (lower is better)
Translates to: AHRAEGEVPINMKQRAMQSIWAG*EEVGRL
Trigger: CAACCTGCCTACCTCCTCCCACCCCGCCCAGATGGA...CTGCATAGCCCTTTGCTTCATGTTAATGGGGACTTCCCCTTCTGCCCTATGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CCA 90 bp AGCATCTATACAGGCTGGTACCCCAGGTTTCCACAGGAAACAGCTGCTGGCAGCCTGCAGCTGTTGCTTTaGCTCCTCTGCCTCAGCCAC +
Preference number: 4 (lower is better)
Translates to: SIYTGWYPRFPQETAAGSLQLLL*LLCLSH
Trigger: GTGGCTGAGGCAGAGGAGCCAAAGCAACAGCTGCAG...GCTGCCAGCAGCTGTTTCCTGTGGAAACCTGGGGTACCAGCCTGTATAGATGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CCA 90 bp AGGCTCCCTTGTTGGCCTCAGTGCTCCCTATCCCACGTGAAGGTGGGGGCAGTGTTGGTGATTGTGTGCTaGACCCAGTGGGTGTCATTA +
Preference number: 4 (lower is better)
Translates to: RLPCWPQCSLSHVKVGAVLVIVC*TQWVSL
Trigger: TAATGACACCCACTGGGTCCAGCACACAATCACCAA...CACTGCCCCCACCTTCACGTGGGATAGGGAGCACTGAGGCCAACAAGGGAGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR TCA 90 bp AGGCTCCCTTGTTGGCCTCAGTGCTCCCTATCCCACGTGAAGGTGGGGGCAGTGATATCAAGCTGGGCATaGATGATGTTGCCCATGACA +
Preference number: 4 (lower is better)
Translates to: RLPCWPQCSLSHVKVGAVISSWA*MMLPMT
Trigger: TGTCATGGGCAACATCATTCATGCCCAGCTTGATAT...CACTGCCCCCACCTTCACGTGGGATAGGGAGCACTGAGGCCAACAAGGGAGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR TCA 90 bp CCCAAGAATAGCATCTATACAGGCTGGTACCCCAGGTTTCCACAGGAAACAGCTTGGGGCTGGAGGTGGTaGGCCACCCCTGTCATCATC +
Preference number: 4 (lower is better)
Translates to: PKNSIYTGWYPRFPQETAWGWRW*ATPVII
Trigger: GATGATGACAGGGGTGGCTCACCACCTCCAGCCCCA...AGCTGTTTCCTGTGGAAACCTGGGGTACCAGCCTGTATAGATGCTATTCTTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR TCA 90 bp GCACATAGGGCAGAAGGGGAAGTCCCCATTAACATGAAGCAAAGGGCTATGCAGGCCAGGAGGACCAGCTaGGGCTGCAGTCAATCCCTT +
Preference number: 4 (lower is better)
Translates to: AHRAEGEVPINMKQRAMQARRTS*GCSQSL
Trigger: AAGGGATTGACTGCAGCCTCAGCTGGTCCTCCTGGC...CTGCATAGCCCTTTGCTTCATGTTAATGGGGACTTCCCCTTCTGCCCTATGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR TCA 90 bp CATCTATACAGGCTGGTACCCCAGGTTTCCACAGGAAACAGCTGCTGGCAGCTACCGTTTTACCTTGAATaGAGGCAACCGCAGGGCCCC +
Preference number: 4 (lower is better)
Translates to: HLYRLVPQVSTGNSCWQLPFYLE*RQPQGP
Trigger: GGGGCCCTGCGGTTGCCTTCATTCAAGGTAAAACGG...TAGCTGCCAGCAGCTGTTTCCTGTGGAAACCTGGGGTACCAGCCTGTATAGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR GCA 90 bp CATCTATACAGGCTGGTACCCCAGGTTTCCACAGGAAACAGCTGCTGGCAGCTACCCCACAGTAGTGCCTaGTGGATAGGCAGCTGTGTC +
Preference number: 4 (lower is better)
Translates to: HLYRLVPQVSTGNSCWQLPHSSA*WIGSCV
Trigger: GACACAGCTGCCTATCCAGCAGGCACTACTGTGGGG...TAGCTGCCAGCAGCTGTTTCCTGTGGAAACCTGGGGTACCAGCCTGTATAGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR GCA 90 bp CATCTATACAGGCTGGTACCCCAGGTTTCCACAGGAAACAGCTGCTGGCAGCTATGGAGAGCTGAAGAGTaGAGCAAGGGCAGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: HLYRLVPQVSTGNSCWQLWRAEE*SKGRSW
Trigger: CCAGCTCCTGCCCTTGCTGCACTCTTCAGCTCTCCA...TAGCTGCCAGCAGCTGTTTCCTGTGGAAACCTGGGGTACCAGCCTGTATAGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR GCA 90 bp AGCATCTATACAGGCTGGTACCCCAGGTTTCCACAGGAAACAGCTGCTGGCAGCGGAAAAGGTAGCTGCTaGCAATGCCCTCCTGCACGT +
Preference number: 4 (lower is better)
Translates to: SIYTGWYPRFPQETAAGSGKGSC*QCPPAR
Trigger: ACGTGCAGGAGGGCATTGGCAGCAGCTACCTTTTCC...GCTGCCAGCAGCTGTTTCCTGTGGAAACCTGGGGTACCAGCCTGTATAGATGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CCA 90 bp CCCAAGAATAGCATCTATACAGGCTGGTACCCCAGGTTTCCACAGGAAACAGCTGCACACTCTCGTTGGTaGTCTCTGGGGCTGGGGAGC +
Preference number: 4 (lower is better)
Translates to: PKNSIYTGWYPRFPQETAAHSRW*SLGLGS
Trigger: GCTCCCCAGCCCCAGAGACCACCAACGAGAGTGTGC...AGCTGTTTCCTGTGGAAACCTGGGGTACCAGCCTGTATAGATGCTATTCTTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CCA 90 bp CATGAAGCAAAGGGCTATGCAGCCCCCAAGAATAGCATCTATACAGGCTGGTACTCCATCTGGGCGGGGTaGGAGGAGGTAGGCAGGTTG +
Preference number: 4 (lower is better)
Translates to: HEAKGYAAPKNSIYTGWYSIWAG*EEVGRL
Trigger: CAACCTGCCTACCTCCTCCCACCCCGCCCAGATGGA...GTACCAGCCTGTATAGATGCTATTCTTGGGGGCTGCATAGCCCTTTGCTTCATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CCA 90 bp AGCATCTATACAGGCTGGTACCCCAGGTTTCCACAGGAAACAGCTGCTGGCAGCCCCTGCCGTAACTGGTaGAGCCGTGTTAACATCTGG +
Preference number: 4 (lower is better)
Translates to: SIYTGWYPRFPQETAAGSPCRNW*SRVNIW
Trigger: CCAGATGTTAACACGGCTCCACCAGTTACGGCAGGG...GCTGCCAGCAGCTGTTTCCTGTGGAAACCTGGGGTACCAGCCTGTATAGATGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CCA 90 bp CCACAGGGTCTGGCAGGAACAGATGAGGCAGGGTTCCAGGCACAGAGTTCCCAGCTTTGTCCTCTTCCTTaGCTTGCTGTTTGGCTGCAT +
Preference number: 4 (lower is better)
Translates to: PQGLAGTDEAGFQAQSSQLCPLP*LAVWLH
Trigger: ATGCAGCCAAACAGCAAGCCAAGGAAGAGGACAAAG...CTGGGAACTCTGTGCCTGGAACCCTGCCTCATCTGTTCCTGCCAGACCCTGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CCA 90 bp GCACATAGGGCAGAAGGGGAAGTCCCCATTAACATGAAGCAAAGGGCTATGCAGCTCGCTTCGGAGGCTTaGTCCCTGGACGTCCTGGTT +
Preference number: 4 (lower is better)
Translates to: AHRAEGEVPINMKQRAMQLASEA*SLDVLV
Trigger: AACCAGGACGTCCAGGGACCAAGCCTCCGAAGCGAG...CTGCATAGCCCTTTGCTTCATGTTAATGGGGACTTCCCCTTCTGCCCTATGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CCA 90 bp CATCTATACAGGCTGGTACCCCAGGTTTCCACAGGAAACAGCTGCTGGCAGCTAGGAAGGTTCTGGGACTaGTGCCTCCTCTGCAGCAGA +
Preference number: 4 (lower is better)
Translates to: HLYRLVPQVSTGNSCWQLGRFWD*CLLCSR
Trigger: TCTGCTGCAGAGGAGGCACCAGTCCCAGAACCTTCC...TAGCTGCCAGCAGCTGTTTCCTGTGGAAACCTGGGGTACCAGCCTGTATAGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR TCA 90 bp CCAAGAATAGCATCTATACAGGCTGGTACCCCAGGTTTCCACAGGAAACAGCTGCTCTGGCTTTGGACCTaGCATGACAGCGGGGGTCCT +
Preference number: 4 (lower is better)
Translates to: PRIASIQAGTPGFHRKQLLWLWT*HDSGGP
Trigger: AGGACCCCCGCTGTCATGTCAGGTCCAAAGCCAGAG...CAGCTGTTTCCTGTGGAAACCTGGGGTACCAGCCTGTATAGATGCTATTCTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR TCA 90 bp AGCATCTATACAGGCTGGTACCCCAGGTTTCCACAGGAAACAGCTGCTGGCAGCGGGTTTGAAGGAGGTTaGAGTGGTGCTGCTGGAGTA +
Preference number: 4 (lower is better)
Translates to: SIYTGWYPRFPQETAAGSGFEGG*SGAAGV
Trigger: TACTCCAGCAGCACCACTTCAACCTCCTTCAAACCC...GCTGCCAGCAGCTGTTTCCTGTGGAAACCTGGGGTACCAGCCTGTATAGATGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR TCA 90 bp CATGAAGCAAAGGGCTATGCAGCCCCCAAGAATAGCATCTATACAGGCTGGTACCTGACCGCCGGGGTTTaGAGGAGGTTGAAGTGGTGC +
Preference number: 4 (lower is better)
Translates to: HEAKGYAAPKNSIYTGWYLTAGV*RRLKWC
Trigger: GCACCACTTCAACCTCCTTCAAACCCCGGCGGTCAG...GTACCAGCCTGTATAGATGCTATTCTTGGGGGCTGCATAGCCCTTTGCTTCATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR TCA 90 bp CCCAAGAATAGCATCTATACAGGCTGGTACCCCAGGTTTCCACAGGAAACAGCTAGCTGCAGCAGTTGCTaGGGTGGCAGTAGCGGTGGT +
Preference number: 4 (lower is better)
Translates to: PKNSIYTGWYPRFPQETASCSSC*GGSSGG
Trigger: ACCACCGCTACTGCCACCTCAGCAACTGCTGCAGCT...AGCTGTTTCCTGTGGAAACCTGGGGTACCAGCCTGTATAGATGCTATTCTTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR TCA 90 bp CATGAAGCAAAGGGCTATGCAGCCCCCAAGAATAGCATCTATACAGGCTGGTACAGCTGCAGCAGTTGCTaGGGTGGCAGTAGCGGTGGT +
Preference number: 4 (lower is better)
Translates to: HEAKGYAAPKNSIYTGWYSCSSC*GGSSGG
Trigger: ACCACCGCTACTGCCACCTCAGCAACTGCTGCAGCT...GTACCAGCCTGTATAGATGCTATTCTTGGGGGCTGCATAGCCCTTTGCTTCATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR TCA 90 bp TCCACAGGAAACAGCTGCTGGCAGCTACAAAACATTTACAGCTTCTTCTTCGCATCCATTGGCCTTTGGTaGCTCCCGGGCAGCCCCTGG +
Preference number: 4 (lower is better)
Translates to: STGNSCWQLQNIYSFFFASIGLW*LPGSPW
Trigger: CCAGGGGCTGCCCGGGAGTCACCAAAGGCCAATGGA...TGCGAAGAAGAAGCTGTAAATGTTTTGTAGCTGCCAGCAGCTGTTTCCTGTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR TCA 90 bp GCACATAGGGCAGAAGGGGAAGTCCCCATTAACATGAAGCAAAGGGCTATGCAGGCTGCTGCTGCTTTCTaGAGACTCGGACTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: AHRAEGEVPINMKQRAMQAAAAF*RLGLLL
Trigger: GAGGAGGAGTCCGAGTCTTCAGAAAGCAGCAGCAGC...CTGCATAGCCCTTTGCTTCATGTTAATGGGGACTTCCCCTTCTGCCCTATGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR GCA 90 bp GCACATAGGGCAGAAGGGGAAGTCCCCATTAACATGAAGCAAAGGGCTATGCAGCCTGAGAGTAGGGGGTaGTACCCCGAGATGTGTAGG +
Preference number: 4 (lower is better)
Translates to: AHRAEGEVPINMKQRAMQPESRG*YPEMCR
Trigger: CCTACACATCTCGGGGTAGCACCCCCTACTCTCAGG...CTGCATAGCCCTTTGCTTCATGTTAATGGGGACTTCCCCTTCTGCCCTATGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR GCA 90 bp AGCATCTATACAGGCTGGTACCCCAGGTTTCCACAGGAAACAGCTGCTGGCAGCTGGCCTTCTCTTCCTTaGTCTCCCACCACTGGTCAA +
Preference number: 4 (lower is better)
Translates to: SIYTGWYPRFPQETAAGSWPSLP*SPTTGQ
Trigger: TTGACCAGTGGTGGGAGAGCAAGGAAGAGAAGGCCA...GCTGCCAGCAGCTGTTTCCTGTGGAAACCTGGGGTACCAGCCTGTATAGATGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR GCA 90 bp AGCATCTATACAGGCTGGTACCCCAGGTTTCCACAGGAAACAGCTGCTGGCAGCGGCTTGCTGTTTGGCTaGATTCTGGAATGGCTTGGC +
Preference number: 4 (lower is better)
Translates to: SIYTGWYPRFPQETAAGSGLLFG*ILEWLG
Trigger: GCCAAGCCATTCCAGAATGCAGCCAAACAGCAAGCC...GCTGCCAGCAGCTGTTTCCTGTGGAAACCTGGGGTACCAGCCTGTATAGATGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR GCA 90 bp CATCTATACAGGCTGGTACCCCAGGTTTCCACAGGAAACAGCTGCTGGCAGCTAAGGTTCTGGGACTGGTaGCTCCTCTGCAGCAGAGAA +
Preference number: 4 (lower is better)
Translates to: HLYRLVPQVSTGNSCWQLRFWDW*LLCSRE
Trigger: TTCTCTGCTGCAGAGGAGGCACCAGTCCCAGAACCT...TAGCTGCCAGCAGCTGTTTCCTGTGGAAACCTGGGGTACCAGCCTGTATAGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR GCA 90 bp AGGCTCCCTTGTTGGCCTCAGTGCTCCCTATCCCACGTGAAGGTGGGGGCAGTGTACAAGATGGTCATCTaGTCAAATTCACTTCTCGGC +
Preference number: 4 (lower is better)
Translates to: RLPCWPQCSLSHVKVGAVYKMVI*SNSLLG
Trigger: GCCGAGAAGTGAATTTGAGCAGATGACCATCTTGTA...CACTGCCCCCACCTTCACGTGGGATAGGGAGCACTGAGGCCAACAAGGGAGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR GCA 90 bp CCCAAGAATAGCATCTATACAGGCTGGTACCCCAGGTTTCCACAGGAAACAGCTGGTAGCTGCTGCCAATaGCCTCCTGCACGTAGCGCT +
Preference number: 4 (lower is better)
Translates to: PKNSIYTGWYPRFPQETAGSCCQ*PPARSA
Trigger: AGCGCTACGTGCAGGAGGGCATTGGCAGCAGCTACC...AGCTGTTTCCTGTGGAAACCTGGGGTACCAGCCTGTATAGATGCTATTCTTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CCA 90 bp CATCTATACAGGCTGGTACCCCAGGTTTCCACAGGAAACAGCTGCTGGCAGCTAGCTGCACCAGAACCCTaGAACTTCTCACTCAAGGCC +
Preference number: 4 (lower is better)
Translates to: HLYRLVPQVSTGNSCWQLAAPEP*NFSLKA
Trigger: GGCCTTGAGTGAGAAGTTCCAGGGTTCTGGTGCAGC...TAGCTGCCAGCAGCTGTTTCCTGTGGAAACCTGGGGTACCAGCCTGTATAGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CCA 90 bp GCACATAGGGCAGAAGGGGAAGTCCCCATTAACATGAAGCAAAGGGCTATGCAGAGTTGCCCGGCGAGGTaGATAGGAAGTATGGCGCTG +
Preference number: 4 (lower is better)
Translates to: AHRAEGEVPINMKQRAMQSCPAR*IGSMAL
Trigger: CAGCGCCATACTTCCTATCCACCTCGCCGGGCAACT...CTGCATAGCCCTTTGCTTCATGTTAATGGGGACTTCCCCTTCTGCCCTATGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CCA 90 bp TTTCCACAGGAAACAGCTGCTGGCAGCTACAAAACATTTACAGCTTCTTCTTCGGGTGGTCTCTGGGGCTaGGGAGCCAGAGCGTGCAGG +
Preference number: 4 (lower is better)
Translates to: FPQETAAGSYKTFTASSSGGLWG*GARACR
Trigger: CCTGCACGCTCTGGCTCCCCAGCCCCAGAGACCACC...CGAAGAAGAAGCTGTAAATGTTTTGTAGCTGCCAGCAGCTGTTTCCTGTGGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CCA 90 bp TCCACAGGAAACAGCTGCTGGCAGCTACAAAACATTTACAGCTTCTTCTTCGCACTCGTTGGTGGTCTCTaGGGCTGGGGAGCCAGAGCG +
Preference number: 4 (lower is better)
Translates to: STGNSCWQLQNIYSFFFALVGGL*GWGARA
Trigger: CGCTCTGGCTCCCCAGCCCCAGAGACCACCAACGAG...TGCGAAGAAGAAGCTGTAAATGTTTTGTAGCTGCCAGCAGCTGTTTCCTGTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CCA 90 bp GCACATAGGGCAGAAGGGGAAGTCCCCATTAACATGAAGCAAAGGGCTATGCAGAGACTTGGCCTGCAGTaGGGCAGCTGTGGAAGGTTC +
Preference number: 4 (lower is better)
Translates to: AHRAEGEVPINMKQRAMQRLGLQ*GSCGRF
Trigger: GAACCTTCCACAGCTGCCCCACTGCAGGCCAAGTCT...CTGCATAGCCCTTTGCTTCATGTTAATGGGGACTTCCCCTTCTGCCCTATGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CCA 90 bp CCCAAGAATAGCATCTATACAGGCTGGTACCCCAGGTTTCCACAGGAAACAGCTCTGGACCAGAAGACTTaGCCTGCAGTGGGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: PKNSIYTGWYPRFPQETALDQKT*PAVGQL
Trigger: CAGCTGCCCCACTGCAGGCCAAGTCTTCTGGTCCAG...AGCTGTTTCCTGTGGAAACCTGGGGTACCAGCCTGTATAGATGCTATTCTTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CCA 90 bp CATCTATACAGGCTGGTACCCCAGGTTTCCACAGGAAACAGCTGCTGGCAGCTATTGACCAGAGACGCATaGTCCAGGGGGAGGTTACGA +
Preference number: 4 (lower is better)
Translates to: HLYRLVPQVSTGNSCWQLLTRDA*SRGRLR
Trigger: TCGTAACCTCCCCCTGGACCATGCGTCTCTGGTCAA...TAGCTGCCAGCAGCTGTTTCCTGTGGAAACCTGGGGTACCAGCCTGTATAGATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CCA 90 bp CCCAAGAATAGCATCTATACAGGCTGGTACCCCAGGTTTCCACAGGAAACAGCTTCCCGGGGCCCATCTTaGGGCCGTCTTTTGCGCTTT +
Preference number: 4 (lower is better)
Translates to: PKNSIYTGWYPRFPQETASRGPS*GRLLRF
Trigger: AAAGCGCAAAAGACGGCCCCAAGATGGGCCCCGGGA...AGCTGTTTCCTGTGGAAACCTGGGGTACCAGCCTGTATAGATGCTATTCTTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CCA 90 bp CATGAAGCAAAGGGCTATGCAGCCCCCAAGAATAGCATCTATACAGGCTGGTACTCCCGGGGCCCATCTTaGGGCCGTCTTTTGCGCTTT +
Preference number: 4 (lower is better)
Translates to: HEAKGYAAPKNSIYTGWYSRGPS*GRLLRF
Trigger: AAAGCGCAAAAGACGGCCCCAAGATGGGCCCCGGGA...GTACCAGCCTGTATAGATGCTATTCTTGGGGGCTGCATAGCCCTTTGCTTCATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR TCA 90 bp CATGAAGCAAAGGGCTATGCAGCCCCCAAGAATAGCATCTATACAGGCTGGTACGGGAGGACTGAGGGGTaGACTGGCCAAAGGAAGATG +
Preference number: 4 (lower is better)
Translates to: HEAKGYAAPKNSIYTGWYGRTEG*TGQRKM
Trigger: CATCTTCCTTTGGCCAGTTCACCCCTCAGTCCTCCC...GTACCAGCCTGTATAGATGCTATTCTTGGGGGCTGCATAGCCCTTTGCTTCATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR TCA 90 bp CCCAAGAATAGCATCTATACAGGCTGGTACCCCAGGTTTCCACAGGAAACAGCTGGGAGGACTGAGGGGTaGACTGGCCAAAGGAAGATG +
Preference number: 4 (lower is better)
Translates to: PKNSIYTGWYPRFPQETAGRTEG*TGQRKM
Trigger: CATCTTCCTTTGGCCAGTTCACCCCTCAGTCCTCCC...AGCTGTTTCCTGTGGAAACCTGGGGTACCAGCCTGTATAGATGCTATTCTTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR TCA 90 bp AGCATCTATACAGGCTGGTACCCCAGGTTTCCACAGGAAACAGCTGCTGGCAGCTCAGAACCACGAAACTaGGAGGCTGAGGAAGAAGAC +
Preference number: 4 (lower is better)
Translates to: SIYTGWYPRFPQETAAGSSEPRN*EAEEED
Trigger: GTCTTCTTCCTCAGCCTCTCAGTTTCGTGGTTCTGA...GCTGCCAGCAGCTGTTTCCTGTGGAAACCTGGGGTACCAGCCTGTATAGATGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR TCA 90 bp TTTCCACAGGAAACAGCTGCTGGCAGCTACAAAACATTTACAGCTTCTTCTTCGGGTGTACAGGGCCCATaGCCTGCCCCAGAAGGCACC +
Preference number: 4 (lower is better)
Translates to: FPQETAAGSYKTFTASSSGVQGP*PAPEGT
Trigger: GGTGCCTTCTGGGGCAGGTCATGGGCCCTGTACACC...CGAAGAAGAAGCTGTAAATGTTTTGTAGCTGCCAGCAGCTGTTTCCTGTGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR GCA 90 bp TTTCCACAGGAAACAGCTGCTGGCAGCTACAAAACATTTACAGCTTCTTCTTCGTCTCTCAGGGCTGGGTaGCCCACCACCACCACCACC +
Preference number: 4 (lower is better)
Translates to: FPQETAAGSYKTFTASSSSLRAG*PTTTTT
Trigger: GGTGGTGGTGGTGGTGGGGCACCCAGCCCTGAGAGA...CGAAGAAGAAGCTGTAAATGTTTTGTAGCTGCCAGCAGCTGTTTCCTGTGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR GCA 90 bp CCACAGGGTCTGGCAGGAACAGATGAGGCAGGGTTCCAGGCACAGAGTTCCCAGCGATTAAGGTCTCGCTaGATAATGCTCTTCATCTCT +
Preference number: 4 (lower is better)
Translates to: PQGLAGTDEAGFQAQSSQRLRSR*IMLFIS
Trigger: AGAGATGAAGAGCATTATGCAGCGAGACCTTAATCG...CTGGGAACTCTGTGCCTGGAACCCTGCCTCATCTGTTCCTGCCAGACCCTGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR GCA 90 bp GCACATAGGGCAGAAGGGGAAGTCCCCATTAACATGAAGCAAAGGGCTATGCAGGCTACGCCTCCTGATTaGCCCTTCCTCATCACTGCT +
Preference number: 4 (lower is better)
Translates to: AHRAEGEVPINMKQRAMQATPPD*PFLITA
Trigger: AGCAGTGATGAGGAAGGGGCAATCAGGAGGCGTAGC...CTGCATAGCCCTTTGCTTCATGTTAATGGGGACTTCCCCTTCTGCCCTATGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR GCA 90 bp CATCTATACAGGCTGGTACCCCAGGTTTCCACAGGAAACAGCTGCTGGCAGCTAATAACCTTCGCTGCGTaGAGAGCCTGTCTGATGCTC +
Preference number: 4 (lower is better)
Translates to: HLYRLVPQVSTGNSCWQLITFAA*RACLML
Trigger: GAGCATCAGACAGGCTCTGCACGCAGCGAAGGTTAT...TAGCTGCCAGCAGCTGTTTCCTGTGGAAACCTGGGGTACCAGCCTGTATAGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR GCA 90 bp CCCAAGAATAGCATCTATACAGGCTGGTACCCCAGGTTTCCACAGGAAACAGCTCCCGGAAAAGGTAGCTaGTGCCAATGCCCTCCTGCA +
Preference number: 4 (lower is better)
Translates to: PKNSIYTGWYPRFPQETAPGKGS*CQCPPA
Trigger: TGCAGGAGGGCATTGGCAGCAGCTACCTTTTCCGGG...AGCTGTTTCCTGTGGAAACCTGGGGTACCAGCCTGTATAGATGCTATTCTTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CCA 90 bp AGGCTCCCTTGTTGGCCTCAGTGCTCCCTATCCCACGTGAAGGTGGGGGCAGTGGAAGATGTAGAGAAATaGCGGCGAGAAAAAGAATCT +
Preference number: 4 (lower is better)
Translates to: RLPCWPQCSLSHVKVGAVEDVEK*RREKES
Trigger: AGATTCTTTTTCTCGCCGCCATTTCTCTACATCTTC...CACTGCCCCCACCTTCACGTGGGATAGGGAGCACTGAGGCCAACAAGGGAGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CCA 90 bp CCCAAGAATAGCATCTATACAGGCTGGTACCCCAGGTTTCCACAGGAAACAGCTCCTGGTTCTGTCCATTaGCCTTTGGTGACTCCCGGG +
Preference number: 4 (lower is better)
Translates to: PKNSIYTGWYPRFPQETAPGSVH*PLVTPG
Trigger: CCCGGGAGTCACCAAAGGCCAATGGACAGAACCAGG...AGCTGTTTCCTGTGGAAACCTGGGGTACCAGCCTGTATAGATGCTATTCTTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CCA 90 bp TTTCCACAGGAAACAGCTGCTGGCAGCTACAAAACATTTACAGCTTCTTCTTCGTGGTGGTGGAGGAGGTaGCGGAGGGTACTCAGGGGG +
Preference number: 4 (lower is better)
Translates to: FPQETAAGSYKTFTASSSWWWRR*RRVLRG
Trigger: CCCCCTGAGTACCCTCCGCCACCTCCTCCACCACCA...CGAAGAAGAAGCTGTAAATGTTTTGTAGCTGCCAGCAGCTGTTTCCTGTGGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CCA 90 bp GCACATAGGGCAGAAGGGGAAGTCCCCATTAACATGAAGCAAAGGGCTATGCAGTGGTACACTAGGAGGTaGTTCTTCAGCAGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: AHRAEGEVPINMKQRAMQWYTRR*FFSRAC
Trigger: GCAGGCCCTGCTGAAGAACCACCTCCTAGTGTACCA...CTGCATAGCCCTTTGCTTCATGTTAATGGGGACTTCCCCTTCTGCCCTATGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CCA 90 bp CCCAAGAATAGCATCTATACAGGCTGGTACCCCAGGTTTCCACAGGAAACAGCTGGAAGGTTCTGGGACTaGTGCCTCCTCTGCAGCAGA +
Preference number: 4 (lower is better)
Translates to: PKNSIYTGWYPRFPQETAGRFWD*CLLCSR
Trigger: TCTGCTGCAGAGGAGGCACCAGTCCCAGAACCTTCC...AGCTGTTTCCTGTGGAAACCTGGGGTACCAGCCTGTATAGATGCTATTCTTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CCA 90 bp CCAAGAATAGCATCTATACAGGCTGGTACCCCAGGTTTCCACAGGAAACAGCTGAGCTGTGGAAGGTTCTaGGACTGGTGCCTCCTCTGC +
Preference number: 4 (lower is better)
Translates to: PRIASIQAGTPGFHRKQLSCGRF*DWCLLC
Trigger: GCAGAGGAGGCACCAGTCCCAGAACCTTCCACAGCT...CAGCTGTTTCCTGTGGAAACCTGGGGTACCAGCCTGTATAGATGCTATTCTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CCA 90 bp CCCAAGAATAGCATCTATACAGGCTGGTACCCCAGGTTTCCACAGGAAACAGCTAGACTTGGCCTGCAGTaGGGCAGCTGTGGAAGGTTC +
Preference number: 4 (lower is better)
Translates to: PKNSIYTGWYPRFPQETARLGLQ*GSCGRF
Trigger: GAACCTTCCACAGCTGCCCCACTGCAGGCCAAGTCT...AGCTGTTTCCTGTGGAAACCTGGGGTACCAGCCTGTATAGATGCTATTCTTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CCA 90 bp GCACATAGGGCAGAAGGGGAAGTCCCCATTAACATGAAGCAAAGGGCTATGCAGCATCTGAGGTCTCTGTaGCCTCTGAGTCGTCACCAG +
Preference number: 4 (lower is better)
Translates to: AHRAEGEVPINMKQRAMQHLRSL*PLSRHQ
Trigger: CTGGTGACGACTCAGAGGCCACAGAGACCTCAGATG...CTGCATAGCCCTTTGCTTCATGTTAATGGGGACTTCCCCTTCTGCCCTATGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CCA 90 bp CCAAGAATAGCATCTATACAGGCTGGTACCCCAGGTTTCCACAGGAAACAGCTGTTGGGCGTGCAGCAGTaGTTGATGAACCTGGCGAGG +
Preference number: 4 (lower is better)
Translates to: PRIASIQAGTPGFHRKQLLGVQQ*LMNLAR
Trigger: CCTCGCCAGGTTCATCAACCACTGCTGCACGCCCAA...CAGCTGTTTCCTGTGGAAACCTGGGGTACCAGCCTGTATAGATGCTATTCTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CCA 90 bp CCCAAGAATAGCATCTATACAGGCTGGTACCCCAGGTTTCCACAGGAAACAGCTTTGGGCGTGCAGCAGTaGTTGATGAACCTGGCGAGG +
Preference number: 4 (lower is better)
Translates to: PKNSIYTGWYPRFPQETALGVQQ*LMNLAR
Trigger: CCTCGCCAGGTTCATCAACCACTGCTGCACGCCCAA...AGCTGTTTCCTGTGGAAACCTGGGGTACCAGCCTGTATAGATGCTATTCTTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR TCA 90 bp GCACATAGGGCAGAAGGGGAAGTCCCCATTAACATGAAGCAAAGGGCTATGCAGCGTATTTTCGGCAAATaGAGCCCCAGAAGGGTCCTC +
Preference number: 4 (lower is better)
Translates to: AHRAEGEVPINMKQRAMQRIFGK*SPRRVL
Trigger: GAGGACCCTTCTGGGGCTTCATTTGCCGAAAATACG...CTGCATAGCCCTTTGCTTCATGTTAATGGGGACTTCCCCTTCTGCCCTATGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR TCA 90 bp CCCAAGAATAGCATCTATACAGGCTGGTACCCCAGGTTTCCACAGGAAACAGCTTCCAAACTGCTGTGCTaGGCAAAGGGCACACTCTCG +
Preference number: 4 (lower is better)
Translates to: PKNSIYTGWYPRFPQETASKLLC*AKGTLS
Trigger: CGAGAGTGTGCCCTTTGCTCAGCACAGCAGTTTGGA...AGCTGTTTCCTGTGGAAACCTGGGGTACCAGCCTGTATAGATGCTATTCTTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR TCA 90 bp TTTCCACAGGAAACAGCTGCTGGCAGCTACAAAACATTTACAGCTTCTTCTTCGTGGGGCTGGAGGTGGTaGGCCACCCCTGTCATCATC +
Preference number: 4 (lower is better)
Translates to: FPQETAAGSYKTFTASSSWGWRW*ATPVII
Trigger: GATGATGACAGGGGTGGCTCACCACCTCCAGCCCCA...CGAAGAAGAAGCTGTAAATGTTTTGTAGCTGCCAGCAGCTGTTTCCTGTGGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR TCA 90 bp CATGAAGCAAAGGGCTATGCAGCCCCCAAGAATAGCATCTATACAGGCTGGTACGCCACTCTCGGAGTCTaGTGTGCTGCCATTTTCACC +
Preference number: 4 (lower is better)
Translates to: HEAKGYAAPKNSIYTGWYATLGV*CAAIFT
Trigger: GGTGAAAATGGCAGCACATCAGACTCCGAGAGTGGC...GTACCAGCCTGTATAGATGCTATTCTTGGGGGCTGCATAGCCCTTTGCTTCATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR GCA 90 bp CCCAAGAATAGCATCTATACAGGCTGGTACCCCAGGTTTCCACAGGAAACAGCTCATCCCTCCCCACTGTaGCCCAAGTCGATCCATAAG +
Preference number: 4 (lower is better)
Translates to: PKNSIYTGWYPRFPQETAHPSPL*PKSIHK
Trigger: CTTATGGATCGACTTGGGGCACAGTGGGGAGGGATG...AGCTGTTTCCTGTGGAAACCTGGGGTACCAGCCTGTATAGATGCTATTCTTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR GCA 90 bp GCACATAGGGCAGAAGGGGAAGTCCCCATTAACATGAAGCAAAGGGCTATGCAGTGGCCTTCTCTTCCTTaGTCTCCCACCACTGGTCAA +
Preference number: 4 (lower is better)
Translates to: AHRAEGEVPINMKQRAMQWPSLP*SPTTGQ
Trigger: TTGACCAGTGGTGGGAGAGCAAGGAAGAGAAGGCCA...CTGCATAGCCCTTTGCTTCATGTTAATGGGGACTTCCCCTTCTGCCCTATGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR GCA 90 bp GCACATAGGGCAGAAGGGGAAGTCCCCATTAACATGAAGCAAAGGGCTATGCAGGGCTTGCTGTTTGGCTaGATTCTGGAATGGCTTGGC +
Preference number: 4 (lower is better)
Translates to: AHRAEGEVPINMKQRAMQGLLFG*ILEWLG
Trigger: GCCAAGCCATTCCAGAATGCAGCCAAACAGCAAGCC...CTGCATAGCCCTTTGCTTCATGTTAATGGGGACTTCCCCTTCTGCCCTATGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR GCA 90 bp CATGAAGCAAAGGGCTATGCAGCCCCCAAGAATAGCATCTATACAGGCTGGTACGCTACGCCTCCTGATTaGCCCTTCCTCATCACTGCT +
Preference number: 4 (lower is better)
Translates to: HEAKGYAAPKNSIYTGWYATPPD*PFLITA
Trigger: AGCAGTGATGAGGAAGGGGCAATCAGGAGGCGTAGC...GTACCAGCCTGTATAGATGCTATTCTTGGGGGCTGCATAGCCCTTTGCTTCATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CCA 90 bp TCCACAGGAAACAGCTGCTGGCAGCTACAAAACATTTACAGCTTCTTCTTCGCAAGGCCTTGCCCCCAGTaGGCACAGTCTGAGGAGTGT +
Preference number: 4 (lower is better)
Translates to: STGNSCWQLQNIYSFFFARPCPQ*AQSEEC
Trigger: ACACTCCTCAGACTGTGCCCACTGGGGGCAAGGCCT...TGCGAAGAAGAAGCTGTAAATGTTTTGTAGCTGCCAGCAGCTGTTTCCTGTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CCA 90 bp AATGTGGTGTTGGGTTTCACTATTAACATTATGTACAATCCAGCCCAACAAGAAGCGTGCAGGGGAAGCTaGGCGTGGGGGAGTCCGGGC +
Preference number: 4 (lower is better)
Translates to: NVVLGFTINIMYNPAQQEACRGS*AWGSPG
Trigger: GCCCGGACTCCCCCACGCCCAGCTTCCCCTGCACGC...TTCTTGTTGGGCTGGATTGTACATAATGTTAATAGTGAAACCCAACACCACATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CCA 90 bp TTTCCACAGGAAACAGCTGCTGGCAGCTACAAAACATTTACAGCTTCTTCTTCGAGGGCACACTCTCGTTaGTGGTCTCTGGGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: FPQETAAGSYKTFTASSSRAHSR*WSLGLG
Trigger: CCCCAGCCCCAGAGACCACCAACGAGAGTGTGCCCT...CGAAGAAGAAGCTGTAAATGTTTTGTAGCTGCCAGCAGCTGTTTCCTGTGGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CCA 90 bp AGCATCTATACAGGCTGGTACCCCAGGTTTCCACAGGAAACAGCTGCTGGCAGCGAACATGGAGAAGCCTaGTTCTGTCCATTGGCCTTT +
Preference number: 4 (lower is better)
Translates to: SIYTGWYPRFPQETAAGSEHGEA*FCPLAF
Trigger: AAAGGCCAATGGACAGAACCAGGCTTCTCCATGTTC...GCTGCCAGCAGCTGTTTCCTGTGGAAACCTGGGGTACCAGCCTGTATAGATGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CCA 90 bp CATCTATACAGGCTGGTACCCCAGGTTTCCACAGGAAACAGCTGCTGGCAGCTAAGCCGTGTTAACATCTaGGTCTGCATCTGGAAGGAC +
Preference number: 4 (lower is better)
Translates to: HLYRLVPQVSTGNSCWQLSRVNI*VCIWKD
Trigger: GTCCTTCCAGATGCAGACCCAGATGTTAACACGGCT...TAGCTGCCAGCAGCTGTTTCCTGTGGAAACCTGGGGTACCAGCCTGTATAGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CCA 90 bp CCAAGAATAGCATCTATACAGGCTGGTACCCCAGGTTTCCACAGGAAACAGCTGTTGCTCTCCCACCACTaGTCAAAGGCTCCAAAGGCC +
Preference number: 4 (lower is better)
Translates to: PRIASIQAGTPGFHRKQLLLSHH*SKAPKA
Trigger: GGCCTTTGGAGCCTTTGACCAGTGGTGGGAGAGCAA...CAGCTGTTTCCTGTGGAAACCTGGGGTACCAGCCTGTATAGATGCTATTCTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CCA 90 bp CATGAAGCAAAGGGCTATGCAGCCCCCAAGAATAGCATCTATACAGGCTGGTACGGCCTGCAGGCTGTGTaGGCAATGTCTCCTTTTCAG +
Preference number: 4 (lower is better)
Translates to: HEAKGYAAPKNSIYTGWYGLQAV*AMSPFQ
Trigger: CTGAAAAGGAGACATTGCCCACACAGCCTGCAGGCC...GTACCAGCCTGTATAGATGCTATTCTTGGGGGCTGCATAGCCCTTTGCTTCATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CCA 90 bp CATGAAGCAAAGGGCTATGCAGCCCCCAAGAATAGCATCTATACAGGCTGGTACTGGTACACTAGGAGGTaGTTCTTCAGCAGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: HEAKGYAAPKNSIYTGWYWYTRR*FFSRAC
Trigger: GCAGGCCCTGCTGAAGAACCACCTCCTAGTGTACCA...GTACCAGCCTGTATAGATGCTATTCTTGGGGGCTGCATAGCCCTTTGCTTCATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CCA 90 bp CCCAAGAATAGCATCTATACAGGCTGGTACCCCAGGTTTCCACAGGAAACAGCTTTTTCCGGCGTTTCTTaGGTGGGGGTAGGAGAGGGA +
Preference number: 4 (lower is better)
Translates to: PKNSIYTGWYPRFPQETAFSGVS*VGVGEG
Trigger: TCCCTCTCCTACCCCCACCCAAGAAACGCCGGAAAA...AGCTGTTTCCTGTGGAAACCTGGGGTACCAGCCTGTATAGATGCTATTCTTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CCA 90 bp CCAAGAATAGCATCTATACAGGCTGGTACCCCAGGTTTCCACAGGAAACAGCTGCATCTGAGGTCTCTGTaGCCTCTGAGTCGTCACCAG +
Preference number: 4 (lower is better)
Translates to: PRIASIQAGTPGFHRKQLHLRSL*PLSRHQ
Trigger: CTGGTGACGACTCAGAGGCCACAGAGACCTCAGATG...CAGCTGTTTCCTGTGGAAACCTGGGGTACCAGCCTGTATAGATGCTATTCTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR GCA 90 bp TCCACAGGAAACAGCTGCTGGCAGCTACAAAACATTTACAGCTTCTTCTTCGCAGTCAATCCCTTGCCCTaGCGTAACTGGTGGAGCCGT +
Preference number: 4 (lower is better)
Translates to: STGNSCWQLQNIYSFFFAVNPLP*RNWWSR
Trigger: ACGGCTCCACCAGTTACGGCAGGGCAAGGGATTGAC...TGCGAAGAAGAAGCTGTAAATGTTTTGTAGCTGCCAGCAGCTGTTTCCTGTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR GCA 90 bp CCCAAGAATAGCATCTATACAGGCTGGTACCCCAGGTTTCCACAGGAAACAGCTCCTCATCACTGCTGCTaGTGCTGCTGCTTTCTGAAG +
Preference number: 4 (lower is better)
Translates to: PKNSIYTGWYPRFPQETAPHHCC*CCCFLK
Trigger: CTTCAGAAAGCAGCAGCAGCAGCAGCAGTGATGAGG...AGCTGTTTCCTGTGGAAACCTGGGGTACCAGCCTGTATAGATGCTATTCTTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR GCA 90 bp CCAAGAATAGCATCTATACAGGCTGGTACCCCAGGTTTCCACAGGAAACAGCTGCCTCATCACTGCTGCTaGTGCTGCTGCTTTCTGAAG +
Preference number: 4 (lower is better)
Translates to: PRIASIQAGTPGFHRKQLPHHCC*CCCFLK
Trigger: CTTCAGAAAGCAGCAGCAGCAGCAGCAGTGATGAGG...CAGCTGTTTCCTGTGGAAACCTGGGGTACCAGCCTGTATAGATGCTATTCTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR GCA 90 bp CATGAAGCAAAGGGCTATGCAGCCCCCAAGAATAGCATCTATACAGGCTGGTACCTTCCTCATCACTGCTaGTGCTGCTGCTGCTTTCTG +
Preference number: 4 (lower is better)
Translates to: HEAKGYAAPKNSIYTGWYLPHHC*CCCCFL
Trigger: CAGAAAGCAGCAGCAGCAGCAGCAGTGATGAGGAAG...GTACCAGCCTGTATAGATGCTATTCTTGGGGGCTGCATAGCCCTTTGCTTCATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR GCA 90 bp CATGAAGCAAAGGGCTATGCAGCCCCCAAGAATAGCATCTATACAGGCTGGTACATAACCTTCGCTGCGTaGAGAGCCTGTCTGATGCTC +
Preference number: 4 (lower is better)
Translates to: HEAKGYAAPKNSIYTGWYITFAA*RACLML
Trigger: GAGCATCAGACAGGCTCTGCACGCAGCGAAGGTTAT...GTACCAGCCTGTATAGATGCTATTCTTGGGGGCTGCATAGCCCTTTGCTTCATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CCA 90 bp CATCTATACAGGCTGGTACCCCAGGTTTCCACAGGAAACAGCTGCTGGCAGCTAGAACATGGAGAAGCCTaGTTCTGTCCATTGGCCTTT +
Preference number: 4 (lower is better)
Translates to: HLYRLVPQVSTGNSCWQLEHGEA*FCPLAF
Trigger: AAAGGCCAATGGACAGAACCAGGCTTCTCCATGTTC...TAGCTGCCAGCAGCTGTTTCCTGTGGAAACCTGGGGTACCAGCCTGTATAGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CCA 90 bp GCACATAGGGCAGAAGGGGAAGTCCCCATTAACATGAAGCAAAGGGCTATGCAGAGCCGTGTTAACATCTaGGTCTGCATCTGGAAGGAC +
Preference number: 4 (lower is better)
Translates to: AHRAEGEVPINMKQRAMQSRVNI*VCIWKD
Trigger: GTCCTTCCAGATGCAGACCCAGATGTTAACACGGCT...CTGCATAGCCCTTTGCTTCATGTTAATGGGGACTTCCCCTTCTGCCCTATGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CCA 90 bp CCCAAGAATAGCATCTATACAGGCTGGTACCCCAGGTTTCCACAGGAAACAGCTTTGCCCTGCCGTAACTaGTGGAGCCGTGTTAACATC +
Preference number: 4 (lower is better)
Translates to: PKNSIYTGWYPRFPQETALPCRN*WSRVNI
Trigger: GATGTTAACACGGCTCCACCAGTTACGGCAGGGCAA...AGCTGTTTCCTGTGGAAACCTGGGGTACCAGCCTGTATAGATGCTATTCTTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CCA 90 bp GCACATAGGGCAGAAGGGGAAGTCCCCATTAACATGAAGCAAAGGGCTATGCAGCCTTGGCTTGCTGTTTaGCTGCATTCTGGAATGGCT +
Preference number: 4 (lower is better)
Translates to: AHRAEGEVPINMKQRAMQPWLAV*LHSGMA
Trigger: AGCCATTCCAGAATGCAGCCAAACAGCAAGCCAAGG...CTGCATAGCCCTTTGCTTCATGTTAATGGGGACTTCCCCTTCTGCCCTATGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CCA 90 bp CCAAGAATAGCATCTATACAGGCTGGTACCCCAGGTTTCCACAGGAAACAGCTGCTTCTCATCAGGAGCTaGAAGGGGCTCTGGAACTTC +
Preference number: 4 (lower is better)
Translates to: PRIASIQAGTPGFHRKQLLLIRS*KGLWNF
Trigger: GAAGTTCCAGAGCCCCTTCCAGCTCCTGATGAGAAG...CAGCTGTTTCCTGTGGAAACCTGGGGTACCAGCCTGTATAGATGCTATTCTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CCA 90 bp TCCACAGGAAACAGCTGCTGGCAGCTACAAAACATTTACAGCTTCTTCTTCGCAAGCTGTGGAAGGTTCTaGGACTGGTGCCTCCTCTGC +
Preference number: 4 (lower is better)
Translates to: STGNSCWQLQNIYSFFFASCGRF*DWCLLC
Trigger: GCAGAGGAGGCACCAGTCCCAGAACCTTCCACAGCT...TGCGAAGAAGAAGCTGTAAATGTTTTGTAGCTGCCAGCAGCTGTTTCCTGTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CCA 90 bp TTTCCACAGGAAACAGCTGCTGGCAGCTACAAAACATTTACAGCTTCTTCTTCGGCCAGTCAGCGCCACTaGTTTGCTGCAGCAGCCGTT +
Preference number: 4 (lower is better)
Translates to: FPQETAAGSYKTFTASSSASQRH*FAAAAV
Trigger: AACGGCTGCTGCAGCAAACCAGTGGCGCTGACTGGC...CGAAGAAGAAGCTGTAAATGTTTTGTAGCTGCCAGCAGCTGTTTCCTGTGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CCA 90 bp CCCAAGAATAGCATCTATACAGGCTGGTACCCCAGGTTTCCACAGGAAACAGCTAACAGACCCCACTCATaGATACGGCTCCGGCCAAAT +
Preference number: 4 (lower is better)
Translates to: PKNSIYTGWYPRFPQETANRPHS*IRLRPN
Trigger: ATTTGGCCGGAGCCGTATCCATGAGTGGGGTCTGTT...AGCTGTTTCCTGTGGAAACCTGGGGTACCAGCCTGTATAGATGCTATTCTTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR TCA 90 bp CCCAAGAATAGCATCTATACAGGCTGGTACCCCAGGTTTCCACAGGAAACAGCTAAGCAGGATCCACTATaGGCTTGTAGTTCCGCCACT +
Preference number: 4 (lower is better)
Translates to: PKNSIYTGWYPRFPQETAKQDPL*ACSSAT
Trigger: AGTGGCGGAACTACAAGCTCATAGTGGATCCTGCTT...AGCTGTTTCCTGTGGAAACCTGGGGTACCAGCCTGTATAGATGCTATTCTTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR TCA 90 bp TTTCCACAGGAAACAGCTGCTGGCAGCTACAAAACATTTACAGCTTCTTCTTCGCCGTTTTACCTTGAATaGAGGCAACCGCAGGGCCCC +
Preference number: 4 (lower is better)
Translates to: FPQETAAGSYKTFTASSSPFYLE*RQPQGP
Trigger: GGGGCCCTGCGGTTGCCTTCATTCAAGGTAAAACGG...CGAAGAAGAAGCTGTAAATGTTTTGTAGCTGCCAGCAGCTGTTTCCTGTGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR TCA 90 bp TTTCCACAGGAAACAGCTGCTGGCAGCTACAAAACATTTACAGCTTCTTCTTCGCATCAGCTGGAGAGCTaGAGAGTGCAGCAAGGGCAG +
Preference number: 4 (lower is better)
Translates to: FPQETAAGSYKTFTASSSHQLES*RVQQGQ
Trigger: CTGCCCTTGCTGCACTCTTCAGCTCTCCAGCTGATG...CGAAGAAGAAGCTGTAAATGTTTTGTAGCTGCCAGCAGCTGTTTCCTGTGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR GCA 90 bp CCAAGAATAGCATCTATACAGGCTGGTACCCCAGGTTTCCACAGGAAACAGCTGTACGGGAATCCAAACTaGTGTGCTGAGCAAAGGGCA +
Preference number: 4 (lower is better)
Translates to: PRIASIQAGTPGFHRKQLYGNPN*CAEQRA
Trigger: TGCCCTTTGCTCAGCACAGCAGTTTGGATTCCCGTA...CAGCTGTTTCCTGTGGAAACCTGGGGTACCAGCCTGTATAGATGCTATTCTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR GCA 90 bp AGCATCTATACAGGCTGGTACCCCAGGTTTCCACAGGAAACAGCTGCTGGCAGCTCCACTCCCTGTAGGTaGTACATCTTCAAAATTAGC +
Preference number: 4 (lower is better)
Translates to: SIYTGWYPRFPQETAAGSSTPCR*YIFKIS
Trigger: GCTAATTTTGAAGATGTAGCACCTACAGGGAGTGGA...GCTGCCAGCAGCTGTTTCCTGTGGAAACCTGGGGTACCAGCCTGTATAGATGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR GCA 90 bp CCAAGAATAGCATCTATACAGGCTGGTACCCCAGGTTTCCACAGGAAACAGCTGATCCTCACCATCCGATaGCTCTGCTTCCTTCTTGGT +
Preference number: 4 (lower is better)
Translates to: PRIASIQAGTPGFHRKQLILTIR*LCFLLG
Trigger: ACCAAGAAGGAAGCAGAGGCATCGGATGGTGAGGAT...CAGCTGTTTCCTGTGGAAACCTGGGGTACCAGCCTGTATAGATGCTATTCTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR GCA 90 bp CCCAAGAATAGCATCTATACAGGCTGGTACCCCAGGTTTCCACAGGAAACAGCTATCCTCACCATCCGATaGCTCTGCTTCCTTCTTGGT +
Preference number: 4 (lower is better)
Translates to: PKNSIYTGWYPRFPQETAILTIR*LCFLLG
Trigger: ACCAAGAAGGAAGCAGAGGCATCGGATGGTGAGGAT...AGCTGTTTCCTGTGGAAACCTGGGGTACCAGCCTGTATAGATGCTATTCTTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR GCA 90 bp CCCAAGAATAGCATCTATACAGGCTGGTACCCCAGGTTTCCACAGGAAACAGCTCATCACTGCTGCTGCTaGTGCTGCTTTCTGAAGACT +
Preference number: 4 (lower is better)
Translates to: PKNSIYTGWYPRFPQETAHHCCC*CCFLKT
Trigger: AGTCTTCAGAAAGCAGCAGCAGCAGCAGCAGTGATG...AGCTGTTTCCTGTGGAAACCTGGGGTACCAGCCTGTATAGATGCTATTCTTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR GCA 90 bp CATGAAGCAAAGGGCTATGCAGCCCCCAAGAATAGCATCTATACAGGCTGGTACGGTAATAACCTTCGCTaGGTGCAGAGCCTGTCTGAT +
Preference number: 4 (lower is better)
Translates to: HEAKGYAAPKNSIYTGWYGNNLR*VQSLSD
Trigger: ATCAGACAGGCTCTGCACGCAGCGAAGGTTATTACC...GTACCAGCCTGTATAGATGCTATTCTTGGGGGCTGCATAGCCCTTTGCTTCATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR GCA 90 bp TTTCCACAGGAAACAGCTGCTGGCAGCTACAAAACATTTACAGCTTCTTCTTCGCCCGGAAAAGGTAGCTaGTGCCAATGCCCTCCTGCA +
Preference number: 4 (lower is better)
Translates to: FPQETAAGSYKTFTASSSPGKGS*CQCPPA
Trigger: TGCAGGAGGGCATTGGCAGCAGCTACCTTTTCCGGG...CGAAGAAGAAGCTGTAAATGTTTTGTAGCTGCCAGCAGCTGTTTCCTGTGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CCA 90 bp CATCTATACAGGCTGGTACCCCAGGTTTCCACAGGAAACAGCTGCTGGCAGCTAATGACAGAGGTGAGGTaGAGGTTTTTGACAGTTTCC +
Preference number: 4 (lower is better)
Translates to: HLYRLVPQVSTGNSCWQLMTEVR*RFLTVS
Trigger: GGAAACTGTCAAAAACCTCCACCTCACCTCTGTCAT...TAGCTGCCAGCAGCTGTTTCCTGTGGAAACCTGGGGTACCAGCCTGTATAGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CCA 90 bp CCAAGAATAGCATCTATACAGGCTGGTACCCCAGGTTTCCACAGGAAACAGCTGTTCTCCGGAAGAACATaGAGAAGCCTGGTTCTGTCC +
Preference number: 4 (lower is better)
Translates to: PRIASIQAGTPGFHRKQLFSGRT*RSLVLS
Trigger: GGACAGAACCAGGCTTCTCCATGTTCTTCCGGAGAA...CAGCTGTTTCCTGTGGAAACCTGGGGTACCAGCCTGTATAGATGCTATTCTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CCA 90 bp GCACATAGGGCAGAAGGGGAAGTCCCCATTAACATGAAGCAAAGGGCTATGCAGATGCTCTTCATCTCTTaGACAAGGGTAGCCAGCACA +
Preference number: 4 (lower is better)
Translates to: AHRAEGEVPINMKQRAMQMLFIS*TRVAST
Trigger: TGTGCTGGCTACCCTTGTCCAAGAGATGAAGAGCAT...CTGCATAGCCCTTTGCTTCATGTTAATGGGGACTTCCCCTTCTGCCCTATGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CCA 90 bp GCACATAGGGCAGAAGGGGAAGTCCCCATTAACATGAAGCAAAGGGCTATGCAGCATTCTGGAATGGCTTaGCCTTCTCTTCCTTGCTCT +
Preference number: 4 (lower is better)
Translates to: AHRAEGEVPINMKQRAMQHSGMA*PSLPCS
Trigger: AGAGCAAGGAAGAGAAGGCCAAGCCATTCCAGAATG...CTGCATAGCCCTTTGCTTCATGTTAATGGGGACTTCCCCTTCTGCCCTATGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CCA 90 bp GCACATAGGGCAGAAGGGGAAGTCCCCATTAACATGAAGCAAAGGGCTATGCAGTTGGTGATTGTGTGCTaGACCCAGTGGGTGTCATTA +
Preference number: 4 (lower is better)
Translates to: AHRAEGEVPINMKQRAMQLVIVC*TQWVSL
Trigger: TAATGACACCCACTGGGTCCAGCACACAATCACCAA...CTGCATAGCCCTTTGCTTCATGTTAATGGGGACTTCCCCTTCTGCCCTATGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CCA 90 bp CCCAAGAATAGCATCTATACAGGCTGGTACCCCAGGTTTCCACAGGAAACAGCTTCTCATCAGCGGCAATaGGTTCCATGGCAAACAGAC +
Preference number: 4 (lower is better)
Translates to: PKNSIYTGWYPRFPQETASHQRQ*VPWQTD
Trigger: GTCTGTTTGCCATGGAACCCATTGCCGCTGATGAGA...AGCTGTTTCCTGTGGAAACCTGGGGTACCAGCCTGTATAGATGCTATTCTTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CCA 90 bp CATGAAGCAAAGGGCTATGCAGCCCCCAAGAATAGCATCTATACAGGCTGGTACTCTCATCAGCGGCAATaGGTTCCATGGCAAACAGAC +
Preference number: 4 (lower is better)
Translates to: HEAKGYAAPKNSIYTGWYSHQRQ*VPWQTD
Trigger: GTCTGTTTGCCATGGAACCCATTGCCGCTGATGAGA...GTACCAGCCTGTATAGATGCTATTCTTGGGGGCTGCATAGCCCTTTGCTTCATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR TCA 90 bp TCCACAGGAAACAGCTGCTGGCAGCTACAAAACATTTACAGCTTCTTCTTCGCAACGAAACTGAGAGGCTaGGGAAGAAGACGACGAGGA +
Preference number: 4 (lower is better)
Translates to: STGNSCWQLQNIYSFFFATKLRG*GRRRRG
Trigger: TCCTCGTCGTCTTCTTCCTCAGCCTCTCAGTTTCGT...TGCGAAGAAGAAGCTGTAAATGTTTTGTAGCTGCCAGCAGCTGTTTCCTGTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR TCA 90 bp CCAAGAATAGCATCTATACAGGCTGGTACCCCAGGTTTCCACAGGAAACAGCTGTCTGAGACTCAATGGTaGTCACCTTCGCATAGCAGT +
Preference number: 4 (lower is better)
Translates to: PRIASIQAGTPGFHRKQLSETQW*SPSHSS
Trigger: ACTGCTATGCGAAGGTGATCACCATTGAGTCTCAGA...CAGCTGTTTCCTGTGGAAACCTGGGGTACCAGCCTGTATAGATGCTATTCTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR GCA 90 bp TCCACAGGAAACAGCTGCTGGCAGCTACAAAACATTTACAGCTTCTTCTTCGCAAGGTTGAAGTGGTGCTaGTGGAGTAGGCAGAGTCCT +
Preference number: 4 (lower is better)
Translates to: STGNSCWQLQNIYSFFFARLKWC*WSRQSP
Trigger: AGGACTCTGCCTACTCCAGCAGCACCACTTCAACCT...TGCGAAGAAGAAGCTGTAAATGTTTTGTAGCTGCCAGCAGCTGTTTCCTGTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR GCA 90 bp CATCTATACAGGCTGGTACCCCAGGTTTCCACAGGAAACAGCTGCTGGCAGCTACCAGCTTTCATAATATaGTGGGTAGCTAGAGTCAGA +
Preference number: 4 (lower is better)
Translates to: HLYRLVPQVSTGNSCWQLPAFII*WVARVR
Trigger: TCTGACTCTAGCTACCCAGCATATTATGAAAGCTGG...TAGCTGCCAGCAGCTGTTTCCTGTGGAAACCTGGGGTACCAGCCTGTATAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR GCA 90 bp CATGAAGCAAAGGGCTATGCAGCCCCCAAGAATAGCATCTATACAGGCTGGTACTTCAAAATTAGCTGGTaGAGGAGGAGGTGTACAGGG +
Preference number: 4 (lower is better)
Translates to: HEAKGYAAPKNSIYTGWYFKISW*RRRCTG
Trigger: CCCTGTACACCTCCTCCTGCACCAGCTAATTTTGAA...GTACCAGCCTGTATAGATGCTATTCTTGGGGGCTGCATAGCCCTTTGCTTCATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR GCA 90 bp CCAAGAATAGCATCTATACAGGCTGGTACCCCAGGTTTCCACAGGAAACAGCTGTCTCGGAGTCTGATGTaGTGCCATTTTCACCATCTG +
Preference number: 4 (lower is better)
Translates to: PRIASIQAGTPGFHRKQLSRSLM*CHFHHL
Trigger: CAGATGGTGAAAATGGCAGCACATCAGACTCCGAGA...CAGCTGTTTCCTGTGGAAACCTGGGGTACCAGCCTGTATAGATGCTATTCTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR GCA 90 bp CCCAAGAATAGCATCTATACAGGCTGGTACCCCAGGTTTCCACAGGAAACAGCTTCTCGGAGTCTGATGTaGTGCCATTTTCACCATCTG +
Preference number: 4 (lower is better)
Translates to: PKNSIYTGWYPRFPQETASRSLM*CHFHHL
Trigger: CAGATGGTGAAAATGGCAGCACATCAGACTCCGAGA...AGCTGTTTCCTGTGGAAACCTGGGGTACCAGCCTGTATAGATGCTATTCTTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR GCA 90 bp TTTCCACAGGAAACAGCTGCTGGCAGCTACAAAACATTTACAGCTTCTTCTTCGTCTGGATGCTGCTGCTaGAGCTGTTGCTTTGGCTCC +
Preference number: 4 (lower is better)
Translates to: FPQETAAGSYKTFTASSSSGCCC*SCCFGS
Trigger: GGAGCCAAAGCAACAGCTGCAGCAGCAGCATCCAGA...CGAAGAAGAAGCTGTAAATGTTTTGTAGCTGCCAGCAGCTGTTTCCTGTGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CCA 90 bp TTTCCACAGGAAACAGCTGCTGGCAGCTACAAAACATTTACAGCTTCTTCTTCGCACAGTAGTGCCTGCTaGATAGGCAGCTGTGTCCGA +
Preference number: 4 (lower is better)
Translates to: FPQETAAGSYKTFTASSSHSSAC*IGSCVR
Trigger: TCGGACACAGCTGCCTATCCAGCAGGCACTACTGTG...CGAAGAAGAAGCTGTAAATGTTTTGTAGCTGCCAGCAGCTGTTTCCTGTGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CCA 90 bp CATCTATACAGGCTGGTACCCCAGGTTTCCACAGGAAACAGCTGCTGGCAGCTATATCTTGTCGGCTGCTaGAGAAATTTGTATCTTGGG +
Preference number: 4 (lower is better)
Translates to: HLYRLVPQVSTGNSCWQLYLVGC*RNLYLG
Trigger: CCCAAGATACAAATTTCTCCAGCAGCCGACAAGATA...TAGCTGCCAGCAGCTGTTTCCTGTGGAAACCTGGGGTACCAGCCTGTATAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CCA 90 bp CATCTATACAGGCTGGTACCCCAGGTTTCCACAGGAAACAGCTGCTGGCAGCTAGCTTTCATAATATGCTaGGTAGCTAGAGTCAGAACC +
Preference number: 4 (lower is better)
Translates to: HLYRLVPQVSTGNSCWQLAFIIC*VARVRT
Trigger: GGTTCTGACTCTAGCTACCCAGCATATTATGAAAGC...TAGCTGCCAGCAGCTGTTTCCTGTGGAAACCTGGGGTACCAGCCTGTATAGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CCA 90 bp TCCACAGGAAACAGCTGCTGGCAGCTACAAAACATTTACAGCTTCTTCTTCGCAGGAGGTATAGGAAGGTaGGAAGCGCTCAGCCGTATT +
Preference number: 4 (lower is better)
Translates to: STGNSCWQLQNIYSFFFAGGIGR*EALSRI
Trigger: AATACGGCTGAGCGCTTCCCACCTTCCTATACCTCC...TGCGAAGAAGAAGCTGTAAATGTTTTGTAGCTGCCAGCAGCTGTTTCCTGTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CCA 90 bp CCAAGAATAGCATCTATACAGGCTGGTACCCCAGGTTTCCACAGGAAACAGCTGCATTCTGGAATGGCTTaGCCTTCTCTTCCTTGCTCT +
Preference number: 4 (lower is better)
Translates to: PRIASIQAGTPGFHRKQLHSGMA*PSLPCS
Trigger: AGAGCAAGGAAGAGAAGGCCAAGCCATTCCAGAATG...CAGCTGTTTCCTGTGGAAACCTGGGGTACCAGCCTGTATAGATGCTATTCTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CCA 90 bp CATGAAGCAAAGGGCTATGCAGCCCCCAAGAATAGCATCTATACAGGCTGGTACCTTTGTCCTCTTCCTTaGCTTGCTGTTTGGCTGCAT +
Preference number: 4 (lower is better)
Translates to: HEAKGYAAPKNSIYTGWYLCPLP*LAVWLH
Trigger: ATGCAGCCAAACAGCAAGCCAAGGAAGAGGACAAAG...GTACCAGCCTGTATAGATGCTATTCTTGGGGGCTGCATAGCCCTTTGCTTCATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR TCA 90 bp CCAAGAATAGCATCTATACAGGCTGGTACCCCAGGTTTCCACAGGAAACAGCTGATATCAAGCTGGGCATaGATGATGTTGCCCATGACA +
Preference number: 4 (lower is better)
Translates to: PRIASIQAGTPGFHRKQLISSWA*MMLPMT
Trigger: TGTCATGGGCAACATCATTCATGCCCAGCTTGATAT...CAGCTGTTTCCTGTGGAAACCTGGGGTACCAGCCTGTATAGATGCTATTCTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR TCA 90 bp CCCAAGAATAGCATCTATACAGGCTGGTACCCCAGGTTTCCACAGGAAACAGCTGCATGCCTGGCTCTTTaGGCTTCATCTTTTCTTTGT +
Preference number: 4 (lower is better)
Translates to: PKNSIYTGWYPRFPQETAACLAL*ASSFLC
Trigger: ACAAAGAAAAGATGAAGCTCAAAGAGCCAGGCATGC...AGCTGTTTCCTGTGGAAACCTGGGGTACCAGCCTGTATAGATGCTATTCTTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR GCA 90 bp AATGTGGTGTTGGGTTTCACTATTAACATTATGTACAATCCAGCCCAACAAGAAAAGCTCGGGGCTTTCTaGCCGTCTCCCCCACCTTCC +
Preference number: 4 (lower is better)
Translates to: NVVLGFTINIMYNPAQQEKLGAF*PSPPPS
Trigger: GGAAGGTGGGGGAGACGGGCAGAAAGCCCCGAGCTT...TTCTTGTTGGGCTGGATTGTACATAATGTTAATAGTGAAACCCAACACCACATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR GCA 90 bp TTTCCACAGGAAACAGCTGCTGGCAGCTACAAAACATTTACAGCTTCTTCTTCGCACGGCAACTTTCAGTaGCGCACAGACACGGAATCT +
Preference number: 4 (lower is better)
Translates to: FPQETAAGSYKTFTASSSHGNFQ*RTDTES
Trigger: AGATTCCGTGTCTGTGCGGCACTGAAAGTTGCCGTG...CGAAGAAGAAGCTGTAAATGTTTTGTAGCTGCCAGCAGCTGTTTCCTGTGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CCA 90 bp CATGAAGCAAAGGGCTATGCAGCCCCCAAGAATAGCATCTATACAGGCTGGTACATGACAGAGGTGAGGTaGAGGTTTTTGACAGTTTCC +
Preference number: 4 (lower is better)
Translates to: HEAKGYAAPKNSIYTGWYMTEVR*RFLTVS
Trigger: GGAAACTGTCAAAAACCTCCACCTCACCTCTGTCAT...GTACCAGCCTGTATAGATGCTATTCTTGGGGGCTGCATAGCCCTTTGCTTCATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CCA 90 bp TTTCCACAGGAAACAGCTGCTGGCAGCTACAAAACATTTACAGCTTCTTCTTCGTTGAAGTGGTGCTGCTaGAGTAGGCAGAGTCCTGAG +
Preference number: 4 (lower is better)
Translates to: FPQETAAGSYKTFTASSSLKWCC*SRQSPE
Trigger: CTCAGGACTCTGCCTACTCCAGCAGCACCACTTCAA...CGAAGAAGAAGCTGTAAATGTTTTGTAGCTGCCAGCAGCTGTTTCCTGTGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CCA 90 bp GCACATAGGGCAGAAGGGGAAGTCCCCATTAACATGAAGCAAAGGGCTATGCAGGCTTTCATAATATGCTaGGTAGCTAGAGTCAGAACC +
Preference number: 4 (lower is better)
Translates to: AHRAEGEVPINMKQRAMQAFIIC*VARVRT
Trigger: GGTTCTGACTCTAGCTACCCAGCATATTATGAAAGC...CTGCATAGCCCTTTGCTTCATGTTAATGGGGACTTCCCCTTCTGCCCTATGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CCA 90 bp TTTCCACAGGAAACAGCTGCTGGCAGCTACAAAACATTTACAGCTTCTTCTTCGGGAGGTATAGGAAGGTaGGAAGCGCTCAGCCGTATT +
Preference number: 4 (lower is better)
Translates to: FPQETAAGSYKTFTASSSGGIGR*EALSRI
Trigger: AATACGGCTGAGCGCTTCCCACCTTCCTATACCTCC...CGAAGAAGAAGCTGTAAATGTTTTGTAGCTGCCAGCAGCTGTTTCCTGTGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CCA 90 bp ATAAAAATGTGGTGTTGGGTTTCACTATTAACATTATGTACAATCCAGCCCAACTGGTGGTGGAGGAGGTaGCGGAGGGTACTCAGGGGG +
Preference number: 4 (lower is better)
Translates to: IKMWCWVSLLTLCTIQPNWWWRR*RRVLRG
Trigger: CCCCCTGAGTACCCTCCGCCACCTCCTCCACCACCA...GTTGGGCTGGATTGTACATAATGTTAATAGTGAAACCCAACACCACATTTTTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CCA 90 bp TTTCCACAGGAAACAGCTGCTGGCAGCTACAAAACATTTACAGCTTCTTCTTCGGTGTGCTGGACCCAGTaGGTGTCATTAAGCCAGTCA +
Preference number: 4 (lower is better)
Translates to: FPQETAAGSYKTFTASSSVCWTQ*VSLSQS
Trigger: TGACTGGCTTAATGACACCCACTGGGTCCAGCACAC...CGAAGAAGAAGCTGTAAATGTTTTGTAGCTGCCAGCAGCTGTTTCCTGTGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR TCA 90 bp ATAAAAATGTGGTGTTGGGTTTCACTATTAACATTATGTACAATCCAGCCCAACGCTTTGGACCTGACATaGCAGCGGGGGTCCTGGAGG +
Preference number: 4 (lower is better)
Translates to: IKMWCWVSLLTLCTIQPNALDLT*QRGSWR
Trigger: CCTCCAGGACCCCCGCTGTCATGTCAGGTCCAAAGC...GTTGGGCTGGATTGTACATAATGTTAATAGTGAAACCCAACACCACATTTTTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR TCA 90 bp TTTCCACAGGAAACAGCTGCTGGCAGCTACAAAACATTTACAGCTTCTTCTTCGTCAGAACCACGAAACTaGGAGGCTGAGGAAGAAGAC +
Preference number: 4 (lower is better)
Translates to: FPQETAAGSYKTFTASSSSEPRN*EAEEED
Trigger: GTCTTCTTCCTCAGCCTCTCAGTTTCGTGGTTCTGA...CGAAGAAGAAGCTGTAAATGTTTTGTAGCTGCCAGCAGCTGTTTCCTGTGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR TCA 90 bp CCCAAGAATAGCATCTATACAGGCTGGTACCCCAGGTTTCCACAGGAAACAGCTTCTTCTTCCGAAACTTaGGCTGGTTTAGCTTTAGCA +
Preference number: 4 (lower is better)
Translates to: PKNSIYTGWYPRFPQETASSSET*AGLALA
Trigger: TGCTAAAGCTAAACCAGCTCAAGTTTCGGAAGAAGA...AGCTGTTTCCTGTGGAAACCTGGGGTACCAGCCTGTATAGATGCTATTCTTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR TCA 90 bp TCCACAGGAAACAGCTGCTGGCAGCTACAAAACATTTACAGCTTCTTCTTCGCATCTGAGACTCAATGGTaGTCACCTTCGCATAGCAGT +
Preference number: 4 (lower is better)
Translates to: STGNSCWQLQNIYSFFFASETQW*SPSHSS
Trigger: ACTGCTATGCGAAGGTGATCACCATTGAGTCTCAGA...TGCGAAGAAGAAGCTGTAAATGTTTTGTAGCTGCCAGCAGCTGTTTCCTGTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR GCA 90 bp GCACATAGGGCAGAAGGGGAAGTCCCCATTAACATGAAGCAAAGGGCTATGCAGGAGTATCTTGTCGGCTaGTGGAGAAATTTGTATCTT +
Preference number: 4 (lower is better)
Translates to: AHRAEGEVPINMKQRAMQEYLVG*WRNLYL
Trigger: AAGATACAAATTTCTCCAGCAGCCGACAAGATACTC...CTGCATAGCCCTTTGCTTCATGTTAATGGGGACTTCCCCTTCTGCCCTATGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR GCA 90 bp TTTCCACAGGAAACAGCTGCTGGCAGCTACAAAACATTTACAGCTTCTTCTTCGTACGGGAATCCAAACTaGTGTGCTGAGCAAAGGGCA +
Preference number: 4 (lower is better)
Translates to: FPQETAAGSYKTFTASSSYGNPN*CAEQRA
Trigger: TGCCCTTTGCTCAGCACAGCAGTTTGGATTCCCGTA...CGAAGAAGAAGCTGTAAATGTTTTGTAGCTGCCAGCAGCTGTTTCCTGTGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR GCA 90 bp CCCAAGAATAGCATCTATACAGGCTGGTACCCCAGGTTTCCACAGGAAACAGCTTCCACTCCCTGTAGGTaGTACATCTTCAAAATTAGC +
Preference number: 4 (lower is better)
Translates to: PKNSIYTGWYPRFPQETASTPCR*YIFKIS
Trigger: GCTAATTTTGAAGATGTAGCACCTACAGGGAGTGGA...AGCTGTTTCCTGTGGAAACCTGGGGTACCAGCCTGTATAGATGCTATTCTTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR GCA 90 bp TTTCCACAGGAAACAGCTGCTGGCAGCTACAAAACATTTACAGCTTCTTCTTCGGTTAACATCTGGGTCTaGATCTGGAAGGACATGGGC +
Preference number: 4 (lower is better)
Translates to: FPQETAAGSYKTFTASSSVNIWV*IWKDMG
Trigger: GCCCATGTCCTTCCAGATGCAGACCCAGATGTTAAC...CGAAGAAGAAGCTGTAAATGTTTTGTAGCTGCCAGCAGCTGTTTCCTGTGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR GCA 90 bp TTTCCACAGGAAACAGCTGCTGGCAGCTACAAAACATTTACAGCTTCTTCTTCGCATCACTGCTGCTGCTaGTGCTGCTTTCTGAAGACT +
Preference number: 4 (lower is better)
Translates to: FPQETAAGSYKTFTASSSHHCCC*CCFLKT
Trigger: AGTCTTCAGAAAGCAGCAGCAGCAGCAGCAGTGATG...CGAAGAAGAAGCTGTAAATGTTTTGTAGCTGCCAGCAGCTGTTTCCTGTGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR GCA 90 bp CCCAAGAATAGCATCTATACAGGCTGGTACCCCAGGTTTCCACAGGAAACAGCTTACAAGATGGTCATCTaGTCAAATTCACTTCTCGGC +
Preference number: 4 (lower is better)
Translates to: PKNSIYTGWYPRFPQETAYKMVI*SNSLLG
Trigger: GCCGAGAAGTGAATTTGAGCAGATGACCATCTTGTA...AGCTGTTTCCTGTGGAAACCTGGGGTACCAGCCTGTATAGATGCTATTCTTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CCA 90 bp CATGAAGCAAAGGGCTATGCAGCCCCCAAGAATAGCATCTATACAGGCTGGTACTATCTTGTCGGCTGCTaGAGAAATTTGTATCTTGGG +
Preference number: 4 (lower is better)
Translates to: HEAKGYAAPKNSIYTGWYYLVGC*RNLYLG
Trigger: CCCAAGATACAAATTTCTCCAGCAGCCGACAAGATA...GTACCAGCCTGTATAGATGCTATTCTTGGGGGCTGCATAGCCCTTTGCTTCATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CCA 90 bp TTTCCACAGGAAACAGCTGCTGGCAGCTACAAAACATTTACAGCTTCTTCTTCGGAGGGACAGCATGCCTaGCTCTTTGAGCTTCATCTT +
Preference number: 4 (lower is better)
Translates to: FPQETAAGSYKTFTASSSEGQHA*LFELHL
Trigger: AAGATGAAGCTCAAAGAGCCAGGCATGCTGTCCCTC...CGAAGAAGAAGCTGTAAATGTTTTGTAGCTGCCAGCAGCTGTTTCCTGTGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CCA 90 bp AATGTGGTGTTGGGTTTCACTATTAACATTATGTACAATCCAGCCCAACAAGAACTGGACCAGAAGACTTaGCCTGCAGTGGGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: NVVLGFTINIMYNPAQQELDQKT*PAVGQL
Trigger: CAGCTGCCCCACTGCAGGCCAAGTCTTCTGGTCCAG...TTCTTGTTGGGCTGGATTGTACATAATGTTAATAGTGAAACCCAACACCACATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR TCA 90 bp ATAAAAATGTGGTGTTGGGTTTCACTATTAACATTATGTACAATCCAGCCCAACCTGACCGCCGGGGTTTaGAGGAGGTTGAAGTGGTGC +
Preference number: 4 (lower is better)
Translates to: IKMWCWVSLLTLCTIQPNLTAGV*RRLKWC
Trigger: GCACCACTTCAACCTCCTTCAAACCCCGGCGGTCAG...GTTGGGCTGGATTGTACATAATGTTAATAGTGAAACCCAACACCACATTTTTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR GCA 90 bp AATGTGGTGTTGGGTTTCACTATTAACATTATGTACAATCCAGCCCAACAAGAACCCCAGGGCCTGCACTaGTGTTCTCTTCCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: NVVLGFTINIMYNPAQQEPQGLH*CSLPLP
Trigger: AGGAAGAGGAAGAGAACAGCAGTGCAGGCCCTGGGG...TTCTTGTTGGGCTGGATTGTACATAATGTTAATAGTGAAACCCAACACCACATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR GCA 90 bp AATGTGGTGTTGGGTTTCACTATTAACATTATGTACAATCCAGCCCAACAAGAACCAGAAGACTTGGCCTaGAGTGGGGCAGCTGTGGAA +
Preference number: 4 (lower is better)
Translates to: NVVLGFTINIMYNPAQQEPEDLA*SGAAVE
Trigger: TTCCACAGCTGCCCCACTGCAGGCCAAGTCTTCTGG...TTCTTGTTGGGCTGGATTGTACATAATGTTAATAGTGAAACCCAACACCACATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CCA 90 bp CATGAAGCAAAGGGCTATGCAGCCCCCAAGAATAGCATCTATACAGGCTGGTACGAAGATGTAGAGAAATaGCGGCGAGAAAAAGAATCT +
Preference number: 4 (lower is better)
Translates to: HEAKGYAAPKNSIYTGWYEDVEK*RREKES
Trigger: AGATTCTTTTTCTCGCCGCCATTTCTCTACATCTTC...GTACCAGCCTGTATAGATGCTATTCTTGGGGGCTGCATAGCCCTTTGCTTCATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CCA 90 bp AATGTGGTGTTGGGTTTCACTATTAACATTATGTACAATCCAGCCCAACAAGAACCTGGTTCTGTCCATTaGCCTTTGGTGACTCCCGGG +
Preference number: 4 (lower is better)
Translates to: NVVLGFTINIMYNPAQQEPGSVH*PLVTPG
Trigger: CCCGGGAGTCACCAAAGGCCAATGGACAGAACCAGG...TTCTTGTTGGGCTGGATTGTACATAATGTTAATAGTGAAACCCAACACCACATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CCA 90 bp ATAAAAATGTGGTGTTGGGTTTCACTATTAACATTATGTACAATCCAGCCCAACGGGTGGGGGTGGGAGTaGTGGCCTTCTTCTTCGAGT +
Preference number: 4 (lower is better)
Translates to: IKMWCWVSLLTLCTIQPNGWGWE*WPSSSS
Trigger: ACTCGAAGAAGAAGGCCACCACTCCCACCCCCACCC...GTTGGGCTGGATTGTACATAATGTTAATAGTGAAACCCAACACCACATTTTTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR TCA 90 bp AATGTGGTGTTGGGTTTCACTATTAACATTATGTACAATCCAGCCCAACAAGAATCCAAACTGCTGTGCTaGGCAAAGGGCACACTCTCG +
Preference number: 4 (lower is better)
Translates to: NVVLGFTINIMYNPAQQESKLLC*AKGTLS
Trigger: CGAGAGTGTGCCCTTTGCTCAGCACAGCAGTTTGGA...TTCTTGTTGGGCTGGATTGTACATAATGTTAATAGTGAAACCCAACACCACATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR TCA 90 bp ATAAAAATGTGGTGTTGGGTTTCACTATTAACATTATGTACAATCCAGCCCAACCATCAGCTGGAGAGCTaGAGAGTGCAGCAAGGGCAG +
Preference number: 4 (lower is better)
Translates to: IKMWCWVSLLTLCTIQPNHQLES*RVQQGQ
Trigger: CTGCCCTTGCTGCACTCTTCAGCTCTCCAGCTGATG...GTTGGGCTGGATTGTACATAATGTTAATAGTGAAACCCAACACCACATTTTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR GCA 90 bp ATAAAAATGTGGTGTTGGGTTTCACTATTAACATTATGTACAATCCAGCCCAACCCCCACAGTAGTGCCTaGTGGATAGGCAGCTGTGTC +
Preference number: 4 (lower is better)
Translates to: IKMWCWVSLLTLCTIQPNPHSSA*WIGSCV
Trigger: GACACAGCTGCCTATCCAGCAGGCACTACTGTGGGG...GTTGGGCTGGATTGTACATAATGTTAATAGTGAAACCCAACACCACATTTTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR GCA 90 bp ATAAAAATGTGGTGTTGGGTTTCACTATTAACATTATGTACAATCCAGCCCAACGTCAATCCCTTGCCCTaGCGTAACTGGTGGAGCCGT +
Preference number: 4 (lower is better)
Translates to: IKMWCWVSLLTLCTIQPNVNPLP*RNWWSR
Trigger: ACGGCTCCACCAGTTACGGCAGGGCAAGGGATTGAC...GTTGGGCTGGATTGTACATAATGTTAATAGTGAAACCCAACACCACATTTTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR GCA 90 bp TTTCCACAGGAAACAGCTGCTGGCAGCTACAAAACATTTACAGCTTCTTCTTCGCGGAGTCTGATGTGCTaGCATTTTCACCATCTGAAT +
Preference number: 4 (lower is better)
Translates to: FPQETAAGSYKTFTASSSRSLMC*HFHHLN
Trigger: ATTCAGATGGTGAAAATGGCAGCACATCAGACTCCG...CGAAGAAGAAGCTGTAAATGTTTTGTAGCTGCCAGCAGCTGTTTCCTGTGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR GCA 90 bp AATGTGGTGTTGGGTTTCACTATTAACATTATGTACAATCCAGCCCAACAAGAATCTGGATGCTGCTGCTaGAGCTGTTGCTTTGGCTCC +
Preference number: 4 (lower is better)
Translates to: NVVLGFTINIMYNPAQQESGCCC*SCCFGS
Trigger: GGAGCCAAAGCAACAGCTGCAGCAGCAGCATCCAGA...TTCTTGTTGGGCTGGATTGTACATAATGTTAATAGTGAAACCCAACACCACATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CCA 90 bp AATGTGGTGTTGGGTTTCACTATTAACATTATGTACAATCCAGCCCAACAAGAATTCATCTTCCTCAGCTaGAGTAGAGGGCCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: NVVLGFTINIMYNPAQQEFIFLS*SRGPGP
Trigger: AGGCCCAGGCCCTCTACTCCAGCTGAGGAAGATGAA...TTCTTGTTGGGCTGGATTGTACATAATGTTAATAGTGAAACCCAACACCACATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CCA 90 bp ATAAAAATGTGGTGTTGGGTTTCACTATTAACATTATGTACAATCCAGCCCAACCTGCAGCTGTTGCTTTaGCTCCTCTGCCTCAGCCAC +
Preference number: 4 (lower is better)
Translates to: IKMWCWVSLLTLCTIQPNLQLLL*LLCLSH
Trigger: GTGGCTGAGGCAGAGGAGCCAAAGCAACAGCTGCAG...GTTGGGCTGGATTGTACATAATGTTAATAGTGAAACCCAACACCACATTTTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR TCA 90 bp AATGTGGTGTTGGGTTTCACTATTAACATTATGTACAATCCAGCCCAACAAGAAGGGTTTGAAGGAGGTTaGAGTGGTGCTGCTGGAGTA +
Preference number: 4 (lower is better)
Translates to: NVVLGFTINIMYNPAQQEGFEGG*SGAAGV
Trigger: TACTCCAGCAGCACCACTTCAACCTCCTTCAAACCC...TTCTTGTTGGGCTGGATTGTACATAATGTTAATAGTGAAACCCAACACCACATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR TCA 90 bp AATGTGGTGTTGGGTTTCACTATTAACATTATGTACAATCCAGCCCAACAAGAAACTTGGTGGCATCAATaGTGGTGTCGTGATCCACCC +
Preference number: 4 (lower is better)
Translates to: NVVLGFTINIMYNPAQQETWWHQ*WCRDPP
Trigger: GGGTGGATCACGACACCATCATTGATGCCACCAAGT...TTCTTGTTGGGCTGGATTGTACATAATGTTAATAGTGAAACCCAACACCACATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR GCA 90 bp ATAAAAATGTGGTGTTGGGTTTCACTATTAACATTATGTACAATCCAGCCCAACCATCCCTCCCCACTGTaGCCCAAGTCGATCCATAAG +
Preference number: 4 (lower is better)
Translates to: IKMWCWVSLLTLCTIQPNHPSPL*PKSIHK
Trigger: CTTATGGATCGACTTGGGGCACAGTGGGGAGGGATG...GTTGGGCTGGATTGTACATAATGTTAATAGTGAAACCCAACACCACATTTTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR GCA 90 bp TTTCCACAGGAAACAGCTGCTGGCAGCTACAAAACATTTACAGCTTCTTCTTCGCGATTAAGGTCTCGCTaGATAATGCTCTTCATCTCT +
Preference number: 4 (lower is better)
Translates to: FPQETAAGSYKTFTASSSRLRSR*IMLFIS
Trigger: AGAGATGAAGAGCATTATGCAGCGAGACCTTAATCG...CGAAGAAGAAGCTGTAAATGTTTTGTAGCTGCCAGCAGCTGTTTCCTGTGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CCA 90 bp CCCAAGAATAGCATCTATACAGGCTGGTACCCCAGGTTTCCACAGGAAACAGCTAGTTACTTCCTTCAGTaGTATCTGTCCAATATAGAA +
Preference number: 4 (lower is better)
Translates to: PKNSIYTGWYPRFPQETASYFLQ*YLSNIE
Trigger: TTCTATATTGGACAGATACCACTGAAGGAAGTAACT...AGCTGTTTCCTGTGGAAACCTGGGGTACCAGCCTGTATAGATGCTATTCTTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CCA 90 bp ATAAAAATGTGGTGTTGGGTTTCACTATTAACATTATGTACAATCCAGCCCAACGCTGCACCAGAACCCTaGAACTTCTCACTCAAGGCC +
Preference number: 4 (lower is better)
Translates to: IKMWCWVSLLTLCTIQPNAAPEP*NFSLKA
Trigger: GGCCTTGAGTGAGAAGTTCCAGGGTTCTGGTGCAGC...GTTGGGCTGGATTGTACATAATGTTAATAGTGAAACCCAACACCACATTTTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CCA 90 bp TTTCCACAGGAAACAGCTGCTGGCAGCTACAAAACATTTACAGCTTCTTCTTCGCCAAGAAAGAAAACTTaGAGCGTTGTTCCTTCAGCA +
Preference number: 4 (lower is better)
Translates to: FPQETAAGSYKTFTASSSPRKKT*SVVPSA
Trigger: TGCTGAAGGAACAACGCTCCAAGTTTTCTTTCTTGG...CGAAGAAGAAGCTGTAAATGTTTTGTAGCTGCCAGCAGCTGTTTCCTGTGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CCA 90 bp AATGTGGTGTTGGGTTTCACTATTAACATTATGTACAATCCAGCCCAACAAGAATGCCTCTTGTGGAGGTaGAAAAGGGAGAAAGGCCTC +
Preference number: 4 (lower is better)
Translates to: NVVLGFTINIMYNPAQQECLLWR*KREKGL
Trigger: GAGGCCTTTCTCCCTTTTCCACCTCCACAAGAGGCA...TTCTTGTTGGGCTGGATTGTACATAATGTTAATAGTGAAACCCAACACCACATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CCA 90 bp ATAAAAATGTGGTGTTGGGTTTCACTATTAACATTATGTACAATCCAGCCCAACTTGCTCTCCCACCACTaGTCAAAGGCTCCAAAGGCC +
Preference number: 4 (lower is better)
Translates to: IKMWCWVSLLTLCTIQPNLLSHH*SKAPKA
Trigger: GGCCTTTGGAGCCTTTGACCAGTGGTGGGAGAGCAA...GTTGGGCTGGATTGTACATAATGTTAATAGTGAAACCCAACACCACATTTTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CCA 90 bp ATAAAAATGTGGTGTTGGGTTTCACTATTAACATTATGTACAATCCAGCCCAACGGCCTGCAGGCTGTGTaGGCAATGTCTCCTTTTCAG +
Preference number: 4 (lower is better)
Translates to: IKMWCWVSLLTLCTIQPNGLQAV*AMSPFQ
Trigger: CTGAAAAGGAGACATTGCCCACACAGCCTGCAGGCC...GTTGGGCTGGATTGTACATAATGTTAATAGTGAAACCCAACACCACATTTTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR TCA 90 bp ATAAAAATGTGGTGTTGGGTTTCACTATTAACATTATGTACAATCCAGCCCAACACGAAACTGAGAGGCTaGGGAAGAAGACGACGAGGA +
Preference number: 4 (lower is better)
Translates to: IKMWCWVSLLTLCTIQPNTKLRG*GRRRRG
Trigger: TCCTCGTCGTCTTCTTCCTCAGCCTCTCAGTTTCGT...GTTGGGCTGGATTGTACATAATGTTAATAGTGAAACCCAACACCACATTTTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR GCA 90 bp AATGTGGTGTTGGGTTTCACTATTAACATTATGTACAATCCAGCCCAACAAGAACTAGGTGCTTTCGAGTaGGGGGATGAAGAAGGATCT +
Preference number: 4 (lower is better)
Translates to: NVVLGFTINIMYNPAQQELGAFE*GDEEGS
Trigger: AGATCCTTCTTCATCCCCGCACTCGAAAGCACCTAG...TTCTTGTTGGGCTGGATTGTACATAATGTTAATAGTGAAACCCAACACCACATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR GCA 90 bp ATAAAAATGTGGTGTTGGGTTTCACTATTAACATTATGTACAATCCAGCCCAACAGGTTGAAGTGGTGCTaGTGGAGTAGGCAGAGTCCT +
Preference number: 4 (lower is better)
Translates to: IKMWCWVSLLTLCTIQPNRLKWC*WSRQSP
Trigger: AGGACTCTGCCTACTCCAGCAGCACCACTTCAACCT...GTTGGGCTGGATTGTACATAATGTTAATAGTGAAACCCAACACCACATTTTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR GCA 90 bp ATAAAAATGTGGTGTTGGGTTTCACTATTAACATTATGTACAATCCAGCCCAACCTTCCTCATCACTGCTaGTGCTGCTGCTGCTTTCTG +
Preference number: 4 (lower is better)
Translates to: IKMWCWVSLLTLCTIQPNLPHHC*CCCCFL
Trigger: CAGAAAGCAGCAGCAGCAGCAGCAGTGATGAGGAAG...GTTGGGCTGGATTGTACATAATGTTAATAGTGAAACCCAACACCACATTTTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CCA 90 bp TTTCCACAGGAAACAGCTGCTGGCAGCTACAAAACATTTACAGCTTCTTCTTCGTACTTCATTCGTTGTTaGCCTTTGATATCAAGCTGG +
Preference number: 4 (lower is better)
Translates to: FPQETAAGSYKTFTASSSYFIRC*PLISSW
Trigger: CCAGCTTGATATCAAAGGCCAACAACGAATGAAGTA...CGAAGAAGAAGCTGTAAATGTTTTGTAGCTGCCAGCAGCTGTTTCCTGTGGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CCA 90 bp AATGTGGTGTTGGGTTTCACTATTAACATTATGTACAATCCAGCCCAACAAGAATTCTCCGGAAGAACATaGAGAAGCCTGGTTCTGTCC +
Preference number: 4 (lower is better)
Translates to: NVVLGFTINIMYNPAQQEFSGRT*RSLVLS
Trigger: GGACAGAACCAGGCTTCTCCATGTTCTTCCGGAGAA...TTCTTGTTGGGCTGGATTGTACATAATGTTAATAGTGAAACCCAACACCACATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CCA 90 bp AATGTGGTGTTGGGTTTCACTATTAACATTATGTACAATCCAGCCCAACAAGAAGAGGGACAGCATGCCTaGCTCTTTGAGCTTCATCTT +
Preference number: 4 (lower is better)
Translates to: NVVLGFTINIMYNPAQQEEGQHA*LFELHL
Trigger: AAGATGAAGCTCAAAGAGCCAGGCATGCTGTCCCTC...TTCTTGTTGGGCTGGATTGTACATAATGTTAATAGTGAAACCCAACACCACATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CCA 90 bp ATAAAAATGTGGTGTTGGGTTTCACTATTAACATTATGTACAATCCAGCCCAACCTTCTCATCAGGAGCTaGAAGGGGCTCTGGAACTTC +
Preference number: 4 (lower is better)
Translates to: IKMWCWVSLLTLCTIQPNLLIRS*KGLWNF
Trigger: GAAGTTCCAGAGCCCCTTCCAGCTCCTGATGAGAAG...GTTGGGCTGGATTGTACATAATGTTAATAGTGAAACCCAACACCACATTTTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CCA 90 bp ATAAAAATGTGGTGTTGGGTTTCACTATTAACATTATGTACAATCCAGCCCAACGTGTGCTGGACCCAGTaGGTGTCATTAAGCCAGTCA +
Preference number: 4 (lower is better)
Translates to: IKMWCWVSLLTLCTIQPNVCWTQ*VSLSQS
Trigger: TGACTGGCTTAATGACACCCACTGGGTCCAGCACAC...GTTGGGCTGGATTGTACATAATGTTAATAGTGAAACCCAACACCACATTTTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR GCA 90 bp ATAAAAATGTGGTGTTGGGTTTCACTATTAACATTATGTACAATCCAGCCCAACGCTTTCTGCTATCTCTaGTTCCTCCCTATGAGGCAG +
Preference number: 4 (lower is better)
Translates to: IKMWCWVSLLTLCTIQPNAFCYL*FLPMRQ
Trigger: CTGCCTCATAGGGAGGAAGCAGAGATAGCAGAAAGC...GTTGGGCTGGATTGTACATAATGTTAATAGTGAAACCCAACACCACATTTTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR GCA 90 bp ATAAAAATGTGGTGTTGGGTTTCACTATTAACATTATGTACAATCCAGCCCAACTCCTCTTCCTTGGCTTaGTGTTTGGCTGCATTCTGG +
Preference number: 4 (lower is better)
Translates to: IKMWCWVSLLTLCTIQPNSSSLA*CLAAFW
Trigger: CCAGAATGCAGCCAAACAGCAAGCCAAGGAAGAGGA...GTTGGGCTGGATTGTACATAATGTTAATAGTGAAACCCAACACCACATTTTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR GCA 90 bp ATAAAAATGTGGTGTTGGGTTTCACTATTAACATTATGTACAATCCAGCCCAACGGTAATAACCTTCGCTaGGTGCAGAGCCTGTCTGAT +
Preference number: 4 (lower is better)
Translates to: IKMWCWVSLLTLCTIQPNGNNLR*VQSLSD
Trigger: ATCAGACAGGCTCTGCACGCAGCGAAGGTTATTACC...GTTGGGCTGGATTGTACATAATGTTAATAGTGAAACCCAACACCACATTTTTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CCA 90 bp AATGTGGTGTTGGGTTTCACTATTAACATTATGTACAATCCAGCCCAACAAGAAATGCTCTTCATCTCTTaGACAAGGGTAGCCAGCACA +
Preference number: 4 (lower is better)
Translates to: NVVLGFTINIMYNPAQQEMLFIS*TRVAST
Trigger: TGTGCTGGCTACCCTTGTCCAAGAGATGAAGAGCAT...TTCTTGTTGGGCTGGATTGTACATAATGTTAATAGTGAAACCCAACACCACATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR GCA 90 bp ATAAAAATGTGGTGTTGGGTTTCACTATTAACATTATGTACAATCCAGCCCAACTTCAAAATTAGCTGGTaGAGGAGGAGGTGTACAGGG +
Preference number: 4 (lower is better)
Translates to: IKMWCWVSLLTLCTIQPNFKISW*RRRCTG
Trigger: CCCTGTACACCTCCTCCTGCACCAGCTAATTTTGAA...GTTGGGCTGGATTGTACATAATGTTAATAGTGAAACCCAACACCACATTTTTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR GCA 90 bp AATGTGGTGTTGGGTTTCACTATTAACATTATGTACAATCCAGCCCAACAAGAACGGAGTCTGATGTGCTaGCATTTTCACCATCTGAAT +
Preference number: 4 (lower is better)
Translates to: NVVLGFTINIMYNPAQQERSLMC*HFHHLN
Trigger: ATTCAGATGGTGAAAATGGCAGCACATCAGACTCCG...TTCTTGTTGGGCTGGATTGTACATAATGTTAATAGTGAAACCCAACACCACATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CCA 90 bp TTTCCACAGGAAACAGCTGCTGGCAGCTACAAAACATTTACAGCTTCTTCTTCGAGTTACTTCCTTCAGTaGTATCTGTCCAATATAGAA +
Preference number: 4 (lower is better)
Translates to: FPQETAAGSYKTFTASSSSYFLQ*YLSNIE
Trigger: TTCTATATTGGACAGATACCACTGAAGGAAGTAACT...CGAAGAAGAAGCTGTAAATGTTTTGTAGCTGCCAGCAGCTGTTTCCTGTGGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CCA 90 bp AATGTGGTGTTGGGTTTCACTATTAACATTATGTACAATCCAGCCCAACAAGAAGAGAAATTTGTATCTTaGGAGCAGGGAGTGCCATTG +
Preference number: 4 (lower is better)
Translates to: NVVLGFTINIMYNPAQQEEKFVS*EQGVPL
Trigger: CAATGGCACTCCCTGCTCCCAAGATACAAATTTCTC...TTCTTGTTGGGCTGGATTGTACATAATGTTAATAGTGAAACCCAACACCACATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR TCA 90 bp ATAAAAATGTGGTGTTGGGTTTCACTATTAACATTATGTACAATCCAGCCCAACGCATGCCTGGCTCTTTaGGCTTCATCTTTTCTTTGT +
Preference number: 4 (lower is better)
Translates to: IKMWCWVSLLTLCTIQPNACLAL*ASSFLC
Trigger: ACAAAGAAAAGATGAAGCTCAAAGAGCCAGGCATGC...GTTGGGCTGGATTGTACATAATGTTAATAGTGAAACCCAACACCACATTTTTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR TCA 90 bp AATGTGGTGTTGGGTTTCACTATTAACATTATGTACAATCCAGCCCAACAAGAATCTTCTTCCGAAACTTaGGCTGGTTTAGCTTTAGCA +
Preference number: 4 (lower is better)
Translates to: NVVLGFTINIMYNPAQQESSSET*AGLALA
Trigger: TGCTAAAGCTAAACCAGCTCAAGTTTCGGAAGAAGA...TTCTTGTTGGGCTGGATTGTACATAATGTTAATAGTGAAACCCAACACCACATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR GCA 90 bp AATGTGGTGTTGGGTTTCACTATTAACATTATGTACAATCCAGCCCAACAAGAACCAGCTTTCATAATATaGTGGGTAGCTAGAGTCAGA +
Preference number: 4 (lower is better)
Translates to: NVVLGFTINIMYNPAQQEPAFII*WVARVR
Trigger: TCTGACTCTAGCTACCCAGCATATTATGAAAGCTGG...TTCTTGTTGGGCTGGATTGTACATAATGTTAATAGTGAAACCCAACACCACATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR GCA 90 bp ATAAAAATGTGGTGTTGGGTTTCACTATTAACATTATGTACAATCCAGCCCAACGAGTATCTTGTCGGCTaGTGGAGAAATTTGTATCTT +
Preference number: 4 (lower is better)
Translates to: IKMWCWVSLLTLCTIQPNEYLVG*WRNLYL
Trigger: AAGATACAAATTTCTCCAGCAGCCGACAAGATACTC...GTTGGGCTGGATTGTACATAATGTTAATAGTGAAACCCAACACCACATTTTTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS CCA 90 bp GGGAAGCTGGGCGTGGGGGAGTCCGGGCTTCTTCTCTCTCAGGGCTaGGTGCCCCACCACCACCACCACCACCACCACCACCACCACCAC +
Preference number: 5 (lower is better)
Translates to: GKLGVGESGLLLSQG*VPHHHHHHHHHHHH
Trigger: GTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGGGCACCCAGCCCTGAGAGAGAAGAAGCCCGGACTCCCCCACGCCCAGCTTCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS GCA 90 bp AGCTGGGCGTGGGGGAGTCCGGGCTTCTTCTCTCTCAGGGCTGGGTaGCCCACCACCACCACCACCACCACCACCACCACCACCACCACT +
Preference number: 5 (lower is better)
Translates to: SWAWGSPGFFSLRAG*PTTTTTTTTTTTTT
Trigger: AGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGGGCACCCAGCCCTGAGAGAGAAGAAGCCCGGACTCCCCCACGCCCAGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS CCA 90 bp GGGGGCAGCGTCTGGCGGTCCGGCGGGTGGCTCTGCTGGAGGCTGTaGTACACTAGGAGGTGGTTCTTCAGCAGGGCCTGCAGGCTGTGT +
Preference number: 5 (lower is better)
Translates to: GGSVWRSGGWLCWRL*YTRRWFFSRACRLC
Trigger: ACACAGCCTGCAGGCCCTGCTGAAGAACCACCTCCTAGTGTACCACAGCCTCCAGCAGAGCCACCCGCCGGACCGCCAGACGCTGCCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS TCA 90 bp CTCTGCTTCCTCCCTATGAGGCAGCCGCGCCTCCTCTCCCGAGACTaGGGAAGAGGGCAGGGGCTCGGCTGCCATAGGCAAGGGCAGGTG +
Preference number: 5 (lower is better)
Translates to: LCFLPMRQPRLLSRD*GRGQGLGCHRQGQV
Trigger: CACCTGCCCTTGCCTATGGCAGCCGAGCCCCTGCCCTCTTCCTCAGTCTCGGGAGAGGAGGCGCGGCTGCCTCATAGGGAGGAAGCAGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS CCA 90 bp CCCCCTCGGGCGACCTCCTCAGGCCAACTCTTGACCAGAGACGCATaGTCCAGGGGGAGGTTACGAATGGTCCGCTCTACGACCCGGGGG +
Preference number: 5 (lower is better)
Translates to: PPRATSSGQLLTRDA*SRGRLRMVRSTTRG
Trigger: CCCCCGGGTCGTAGAGCGGACCATTCGTAACCTCCCCCTGGACCATGCGTCTCTGGTCAAGAGTTGGCCTGAGGAGGTCGCCCGAGGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS TCA 90 bp CAGCTCGATTCCGACCCCCTCGGGCGACCTCCTCAGGCCAACTCTTaGCCAGAGACGCATGGTCCAGGGGGAGGTTACGAATGGTCCGCT +
Preference number: 5 (lower is better)
Translates to: QLDSDPLGRPPQANS*PETHGPGGGYEWSA
Trigger: AGCGGACCATTCGTAACCTCCCCCTGGACCATGCGTCTCTGGTCAAGAGTTGGCCTGAGGAGGTCGCCCGAGGGGGTCGGAATCGAGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS CCA 90 bp CGGTCCGGCGGGTGGCTCTGCTGGAGGCTGTGGTACACTAGGAGGTaGTTCTTCAGCAGGGCCTGCAGGCTGTGTGGGCAATGTCTCCTT +
Preference number: 5 (lower is better)
Translates to: RSGGWLCWRLWYTRR*FFSRACRLCGQCLL
Trigger: AAGGAGACATTGCCCACACAGCCTGCAGGCCCTGCTGAAGAACCACCTCCTAGTGTACCACAGCCTCCAGCAGAGCCACCCGCCGGACCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CAA 90 bp AGGCTCCCTTGTTGGCCTCAGTGCTCCCTATCCCACGTGAAGGTGGGGGCAGTGAAGGGCACACTCTCGTaGGTGGTCTCTGGGGCTGGG +
Preference number: 5 (lower is better)
Translates to: RLPCWPQCSLSHVKVGAVKGTLS*VVSGAG
Trigger: CCCAGCCCCAGAGACCACCAACGAGAGTGTGCCCTT...CACTGCCCCCACCTTCACGTGGGATAGGGAGCACTGAGGCCAACAAGGGAGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS TCA 90 bp GGGCCCCTCGAAGCCCTGACCCAAAGGCAAAGGCCTCAATGCCTGTaGTACCGCCACTCTTGGCCCAGTCTACGAGGGACAGCATGCCTG +
Preference number: 5 (lower is better)
Translates to: GPLEALTQRQRPQCL*YRHSWPSLRGTACL
Trigger: CAGGCATGCTGTCCCTCGTAGACTGGGCCAAGAGTGGCGGTATCACAGGCATTGAGGCCTTTGCCTTTGGGTCAGGGCTTCGAGGGGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS GCA 90 bp TGTGTCCGAGGAAGACCGTCGGCGGGCTTCAGTCGTCTCAGCGGCTaGACCAGAACCCTGGAACTTCTCACTCAAGGCCTTGCCCCCAGT +
Preference number: 5 (lower is better)
Translates to: CVRGRPSAGFSRLSG*TRTLELLTQGLAPS
Trigger: ACTGGGGGCAAGGCCTTGAGTGAGAAGTTCCAGGGTTCTGGTGCAGCCGCTGAGACGACTGAAGCCCGCCGACGGTCTTCCTCGGACACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
ENSMUST00000144406.8
CDS CCA 90 bp CCGGGGGACTTTTCGAGAGACTGGACCAGAAGACTTGGCCTGCAGTaGGGCAGCTGTGGAAGGTTCTGGGACTGGTGCCTCCTCTGCAGC +
Preference number: 5 (lower is better)
Translates to: PGDFSRDWTRRLGLQ*GSCGRFWDWCLLCS
Trigger: GCTGCAGAGGAGGCACCAGTCCCAGAACCTTCCACAGCTGCCCCACTGCAGGCCAAGTCTTCTGGTCCAGTCTCTCGAAAAGTCCCCCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CAA 90 bp AGGCTCCCTTGTTGGCCTCAGTGCTCCCTATCCCACGTGAAGGTGGGGGCAGTGTGTGTAGGGGGTTCCTaGGGAGGACTGAGGGGTGAA +
Preference number: 5 (lower is better)
Translates to: RLPCWPQCSLSHVKVGAVCVGGS*GGLRGE
Trigger: TTCACCCCTCAGTCCTCCCAAGGAACCCCCTACACA...CACTGCCCCCACCTTCACGTGGGATAGGGAGCACTGAGGCCAACAAGGGAGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CAA 90 bp AGGCTCCCTTGTTGGCCTCAGTGCTCCCTATCCCACGTGAAGGTGGGGGCAGTGTCTGACCGCCGGGGTTaGAAGGAGGTTGAAGTGGTG +
Preference number: 5 (lower is better)
Translates to: RLPCWPQCSLSHVKVGAVSDRRG*KEVEVV
Trigger: CACCACTTCAACCTCCTTCAAACCCCGGCGGTCAGA...CACTGCCCCCACCTTCACGTGGGATAGGGAGCACTGAGGCCAACAAGGGAGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CAA 90 bp CCACAGGGTCTGGCAGGAACAGATGAGGCAGGGTTCCAGGCACAGAGTTCCCAGGCCTGGTTCTGTCCATaGGCCTTTGGTGACTCCCGG +
Preference number: 5 (lower is better)
Translates to: PQGLAGTDEAGFQAQSSQAWFCP*AFGDSR
Trigger: CCGGGAGTCACCAAAGGCCAATGGACAGAACCAGGC...CTGGGAACTCTGTGCCTGGAACCCTGCCTCATCTGTTCCTGCCAGACCCTGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CAA 90 bp CCACAGGGTCTGGCAGGAACAGATGAGGCAGGGTTCCAGGCACAGAGTTCCCAGGGCGTGCAGCAGTGGTaGATGAACCTGGCGAGGTTG +
Preference number: 5 (lower is better)
Translates to: PQGLAGTDEAGFQAQSSQGVQQW*MNLARL
Trigger: CAACCTCGCCAGGTTCATCAACCACTGCTGCACGCC...CTGGGAACTCTGTGCCTGGAACCCTGCCTCATCTGTTCCTGCCAGACCCTGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS TCA 90 bp GCTGATGGTAGGACCTTGCTTTCTGCTATCTCTGCTTCCTCCCTATaGGGCAGCCGCGCCTCCTCTCCCGAGACTGAGGAAGAGGGCAGG +
Preference number: 5 (lower is better)
Translates to: ADGRTLLSAISASSL*GSRASSPETEEEGR
Trigger: CCTGCCCTCTTCCTCAGTCTCGGGAGAGGAGGCGCGGCTGCCTCATAGGGAGGAAGCAGAGATAGCAGAAAGCAAGGTCCTACCATCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS GCA 90 bp CAAAAGCCCCGCCAGGAGGACCAGCTGAGGCTGCAGTCAATCCCTTaGCCTGCCGTAACTGGTGGAGCCGTGTTAACATCTGGGTCTGCA +
Preference number: 5 (lower is better)
Translates to: QKPRQEDQLRLQSIP*PAVTGGAVLTSGSA
Trigger: TGCAGACCCAGATGTTAACACGGCTCCACCAGTTACGGCAGGGCAAGGGATTGACTGCAGCCTCAGCTGGTCCTCCTGGCGGGGCTTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CAA 90 bp AGGCTCCCTTGTTGGCCTCAGTGCTCCCTATCCCACGTGAAGGTGGGGGCAGTGGTGAGGTGGAGGTTTTaGACAGTTTCCTTGGCGCCC +
Preference number: 5 (lower is better)
Translates to: RLPCWPQCSLSHVKVGAVVRWRF*TVSLAP
Trigger: GGGCGCCAAGGAAACTGTCAAAAACCTCCACCTCAC...CACTGCCCCCACCTTCACGTGGGATAGGGAGCACTGAGGCCAACAAGGGAGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CAA 90 bp AGGCTCCCTTGTTGGCCTCAGTGCTCCCTATCCCACGTGAAGGTGGGGGCAGTGTTGGCCTTCTCTTCCTaGCTCTCCCACCACTGGTCA +
Preference number: 5 (lower is better)
Translates to: RLPCWPQCSLSHVKVGAVLAFSS*LSHHWS
Trigger: TGACCAGTGGTGGGAGAGCAAGGAAGAGAAGGCCAA...CACTGCCCCCACCTTCACGTGGGATAGGGAGCACTGAGGCCAACAAGGGAGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS CCA 90 bp GTTTGCCTTGGGTCTTGCCCCGTTCTTCATCTCGCTTCGGAGGCTTaGTCCCTGGACGTCCTGGTTCTCCAGCTTCCTTCTCTCGCTCAG +
Preference number: 5 (lower is better)
Translates to: VCLGSCPVLHLASEA*SLDVLVLQLPSLAQ
Trigger: CTGAGCGAGAGAAGGAAGCTGGAGAACCAGGACGTCCAGGGACCAAGCCTCCGAAGCGAGATGAAGAACGGGGCAAGACCCAAGGCAAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CAA 90 bp AGGCTCCCTTGTTGGCCTCAGTGCTCCCTATCCCACGTGAAGGTGGGGGCAGTGTCCTTGGCTTGCTGTTaGGCTGCATTCTGGAATGGC +
Preference number: 5 (lower is better)
Translates to: RLPCWPQCSLSHVKVGAVSLACC*AAFWNG
Trigger: GCCATTCCAGAATGCAGCCAAACAGCAAGCCAAGGA...CACTGCCCCCACCTTCACGTGGGATAGGGAGCACTGAGGCCAACAAGGGAGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CAA 90 bp AGCATCTATACAGGCTGGTACCCCAGGTTTCCACAGGAAACAGCTGCTGGCAGCTCTCGCTTCGGAGGCTaGGTCCCTGGACGTCCTGGT +
Preference number: 5 (lower is better)
Translates to: SIYTGWYPRFPQETAAGSSRFGG*VPGRPG
Trigger: ACCAGGACGTCCAGGGACCAAGCCTCCGAAGCGAGA...GCTGCCAGCAGCTGTTTCCTGTGGAAACCTGGGGTACCAGCCTGTATAGATGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CAA 90 bp CCACAGGGTCTGGCAGGAACAGATGAGGCAGGGTTCCAGGCACAGAGTTCCCAGATGAACCTGGCGAGGTaGCCACACTTGGTGGCATCA +
Preference number: 5 (lower is better)
Translates to: PQGLAGTDEAGFQAQSSQMNLAR*PHLVAS
Trigger: TGATGCCACCAAGTGTGGCAACCTCGCCAGGTTCAT...CTGGGAACTCTGTGCCTGGAACCCTGCCTCATCTGTTCCTGCCAGACCCTGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS GCA 90 bp TCCTCCTCTTCATCTTCCTCCTCCTCTTCTCCTTCCTGCTCTGGATaGTGCTGCTGCAGCTGTTGCTTTGGCTCCTCTGCCTCAGCCACC +
Preference number: 5 (lower is better)
Translates to: SSSSSSSSSSPSCSG*CCCSCCFGSSASAT
Trigger: GGTGGCTGAGGCAGAGGAGCCAAAGCAACAGCTGCAGCAGCAGCATCCAGAGCAGGAAGGAGAAGAGGAGGAGGAAGATGAAGAGGAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS GCA 90 bp GACTCGGACTCCTCCTCTTCATCTTCCTCCTCCTCTTCTCCTTCCTaGTCTGGATGCTGCTGCTGCAGCTGTTGCTTTGGCTCCTCTGCC +
Preference number: 5 (lower is better)
Translates to: DSDSSSSSSSSSSPS*SGCCCCSCCFGSSA
Trigger: GGCAGAGGAGCCAAAGCAACAGCTGCAGCAGCAGCATCCAGAGCAGGAAGGAGAAGAGGAGGAGGAAGATGAAGAGGAGGAGTCCGAGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS CCA 90 bp TTGGGTCTTGCCCCGTTCTTCATCTCGCTTCGGAGGCTTGGTCCCTaGACGTCCTGGTTCTCCAGCTTCCTTCTCTCGCTCAGGATCATC +
Preference number: 5 (lower is better)
Translates to: LGLAPFFISLRRLGP*TSWFSSFLLSLRII
Trigger: GATGATCCTGAGCGAGAGAAGGAAGCTGGAGAACCAGGACGTCCAGGGACCAAGCCTCCGAAGCGAGATGAAGAACGGGGCAAGACCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CAA 90 bp AGCATCTATACAGGCTGGTACCCCAGGTTTCCACAGGAAACAGCTGCTGGCAGCGTGATACCGCCACTCTaGGCCCAGTCTACGAGGGAC +
Preference number: 5 (lower is better)
Translates to: SIYTGWYPRFPQETAAGSVIPPL*AQSTRD
Trigger: GTCCCTCGTAGACTGGGCCAAGAGTGGCGGTATCAC...GCTGCCAGCAGCTGTTTCCTGTGGAAACCTGGGGTACCAGCCTGTATAGATGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CAA 90 bp AGCATCTATACAGGCTGGTACCCCAGGTTTCCACAGGAAACAGCTGCTGGCAGCGGCGTGCAGCAGTGGTaGATGAACCTGGCGAGGTTG +
Preference number: 5 (lower is better)
Translates to: SIYTGWYPRFPQETAAGSGVQQW*MNLARL
Trigger: CAACCTCGCCAGGTTCATCAACCACTGCTGCACGCC...GCTGCCAGCAGCTGTTTCCTGTGGAAACCTGGGGTACCAGCCTGTATAGATGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS TCA 90 bp GTGAAGAGCACACGGGCCAGGCCTAGGTGCTTTCGAGTGCGGGGATaGAGAAGGATCTCCACTTCTTCCACCTCTCCATATTTCCGGCAC +
Preference number: 5 (lower is better)
Translates to: VKSTRARPRCFRVRG*RRISTSSTSPYFRH
Trigger: GTGCCGGAAATATGGAGAGGTGGAAGAAGTGGAGATCCTTCTTCATCCCCGCACTCGAAAGCACCTAGGCCTGGCCCGTGTGCTCTTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
ENSMUST00000126761.8
ENSMUST00000144406.8
CDS TCA 90 bp GGAGGTATAGGAAGGTGGGAAGCGCTCAGCCGTATTTTCGGCAAATaGAGCCCCAGAAGGGTCCTCTCTAGTTGCCCGGCGAGGTGGATA +
Preference number: 5 (lower is better)
Translates to: GGIGRWEALSRIFGK*SPRRVLSSCPARWI
Trigger: TATCCACCTCGCCGGGCAACTAGAGAGGACCCTTCTGGGGCTTCATTTGCCGAAAATACGGCTGAGCGCTTCCCACCTTCCTATACCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS GCA 90 bp TGGCTCTCCACTCCCTGTAGGTGCTACATCTTCAAAATTAGCTGGTaGAGGAGGAGGTGTACAGGGCCCATGACCTGCCCCAGAAGGCAC +
Preference number: 5 (lower is better)
Translates to: WLSTPCRCYIFKISW*RRRCTGPMTCPRRH
Trigger: GTGCCTTCTGGGGCAGGTCATGGGCCCTGTACACCTCCTCCTGCACCAGCTAATTTTGAAGATGTAGCACCTACAGGGAGTGGAGAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS GCA 90 bp AGAGCACTGGGAGGACGAGTCACTGTCCTCATCCTCACCATCCGATaGCTCTGCTTCCTTCTTGGTGGCATCCACAGCTTCCTCCTGTTC +
Preference number: 5 (lower is better)
Translates to: RALGGRVTVLILTIR*LCFLLGGIHSFLLF
Trigger: GAACAGGAGGAAGCTGTGGATGCCACCAAGAAGGAAGCAGAGGCATCGGATGGTGAGGATGAGGACAGTGACTCGTCCTCCCAGTGCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS CCA 90 bp GCCCCGTTCTTCATCTCGCTTCGGAGGCTTGGTCCCTGGACGTCCTaGTTCTCCAGCTTCCTTCTCTCGCTCAGGATCATCTTCATCTTC +
Preference number: 5 (lower is better)
Translates to: APFFISLRRLGPWTS*FSSFLLSLRIIFIF
Trigger: GAAGATGAAGATGATCCTGAGCGAGAGAAGGAAGCTGGAGAACCAGGACGTCCAGGGACCAAGCCTCCGAAGCGAGATGAAGAACGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CAA 90 bp CATCTATACAGGCTGGTACCCCAGGTTTCCACAGGAAACAGCTGCTGGCAGCTAGAGGAGGTAGGCAGGTaGGTGGGGAGGATAGCCAAG +
Preference number: 5 (lower is better)
Translates to: HLYRLVPQVSTGNSCWQLEEVGR*VGRIAK
Trigger: CTTGGCTATCCTCCCCACCAACCTGCCTACCTCCTC...TAGCTGCCAGCAGCTGTTTCCTGTGGAAACCTGGGGTACCAGCCTGTATAGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CAA 90 bp GCACATAGGGCAGAAGGGGAAGTCCCCATTAACATGAAGCAAAGGGCTATGCAGTCTCGCTTCGGAGGCTaGGTCCCTGGACGTCCTGGT +
Preference number: 5 (lower is better)
Translates to: AHRAEGEVPINMKQRAMQSRFGG*VPGRPG
Trigger: ACCAGGACGTCCAGGGACCAAGCCTCCGAAGCGAGA...CTGCATAGCCCTTTGCTTCATGTTAATGGGGACTTCCCCTTCTGCCCTATGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CAA 90 bp CATCTATACAGGCTGGTACCCCAGGTTTCCACAGGAAACAGCTGCTGGCAGCTAGTTTTCCGGCGTTTCTaGGGTGGGGGTAGGAGAGGG +
Preference number: 5 (lower is better)
Translates to: HLYRLVPQVSTGNSCWQLVFRRF*GGGRRG
Trigger: CCCTCTCCTACCCCCACCCAAGAAACGCCGGAAAAC...TAGCTGCCAGCAGCTGTTTCCTGTGGAAACCTGGGGTACCAGCCTGTATAGATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS GCA 90 bp TGGGGCCGTCTTTTGCGCTTTGGAGTGCTTAGGTTGGTGATTGTGTaGTGGACCCAGTGGGTGTCATTAAGCCAGTCAGCGCCACTGGTT +
Preference number: 5 (lower is better)
Translates to: WGRLLRFGVLRLVIV*WTQWVSLSQSAPLV
Trigger: AACCAGTGGCGCTGACTGGCTTAATGACACCCACTGGGTCCAGCACACAATCACCAACCTAAGCACTCCAAAGCGCAAAAGACGGCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CAA 90 bp CATGAAGCAAAGGGCTATGCAGCCCCCAAGAATAGCATCTATACAGGCTGGTACAAGGGCACACTCTCGTaGGTGGTCTCTGGGGCTGGG +
Preference number: 5 (lower is better)
Translates to: HEAKGYAAPKNSIYTGWYKGTLS*VVSGAG
Trigger: CCCAGCCCCAGAGACCACCAACGAGAGTGTGCCCTT...GTACCAGCCTGTATAGATGCTATTCTTGGGGGCTGCATAGCCCTTTGCTTCATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CAA 90 bp AGGCTCCCTTGTTGGCCTCAGTGCTCCCTATCCCACGTGAAGGTGGGGGCAGTGAGCATGCCTGGCTCTTaGAGCTTCATCTTTTCTTTG +
Preference number: 5 (lower is better)
Translates to: RLPCWPQCSLSHVKVGAVSMPGS*SFIFSL
Trigger: CAAAGAAAAGATGAAGCTCAAAGAGCCAGGCATGCT...CACTGCCCCCACCTTCACGTGGGATAGGGAGCACTGAGGCCAACAAGGGAGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CAA 90 bp CCACAGGGTCTGGCAGGAACAGATGAGGCAGGGTTCCAGGCACAGAGTTCCCAGTCTTTCCGTTTTACCTaGAATGAAGGCAACCGCAGG +
Preference number: 5 (lower is better)
Translates to: PQGLAGTDEAGFQAQSSQSFRFT*NEGNRR
Trigger: CCTGCGGTTGCCTTCATTCAAGGTAAAACGGAAAGA...CTGGGAACTCTGTGCCTGGAACCCTGCCTCATCTGTTCCTGCCAGACCCTGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS TCA 90 bp TGTTCCTTCAGCAGCATTTCAATACGGGAATCCAAACTGCTGTGCTaGGCAAAGGGCACACTCTCGTTGGTGGTCTCTGGGGCTGGGGAG +
Preference number: 5 (lower is better)
Translates to: CSFSSISIRESKLLC*AKGTLSLVVSGAGE
Trigger: CTCCCCAGCCCCAGAGACCACCAACGAGAGTGTGCCCTTTGCTCAGCACAGCAGTTTGGATTCCCGTATTGAAATGCTGCTGAAGGAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS GCA 90 bp ACCTTCTTGCCCTTGTGTGTACAGAGCATAGGGCAAGCCATAGGCTaGCTCTTGTGGAGGTGGAAAAGGGAGAAAGGCCTCGCCAAAAGC +
Preference number: 5 (lower is better)
Translates to: TFLPLCVQSIGQAIG*LLWRWKREKGLAKS
Trigger: GCTTTTGGCGAGGCCTTTCTCCCTTTTCCACCTCCACAAGAGGCAGCCTATGGCTTGCCCTATGCTCTGTACACACAAGGGCAAGAAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS CCA 90 bp GGCCAACATATTCGATCACCATCTCATCAGCGGCAATGGGTTCCATaGCAAACAGACCCCACTCATGGATACGGCTCCGGCCAAATCGGA +
Preference number: 5 (lower is better)
Translates to: GQHIRSPSHQRQWVP*QTDPTHGYGSGQIG
Trigger: TCCGATTTGGCCGGAGCCGTATCCATGAGTGGGGTCTGTTTGCCATGGAACCCATTGCCGCTGATGAGATGGTGATCGAATATGTTGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS CCA 90 bp GGATGTTCTGGCCAACATATTCGATCACCATCTCATCAGCGGCAATaGGTTCCATGGCAAACAGACCCCACTCATGGATACGGCTCCGGC +
Preference number: 5 (lower is better)
Translates to: GCSGQHIRSPSHQRQ*VPWQTDPTHGYGSG
Trigger: GCCGGAGCCGTATCCATGAGTGGGGTCTGTTTGCCATGGAACCCATTGCCGCTGATGAGATGGTGATCGAATATGTTGGCCAGAACATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CAA 90 bp CCCAAGAATAGCATCTATACAGGCTGGTACCCCAGGTTTCCACAGGAAACAGCTGAGGAGGTAGGCAGGTaGGTGGGGAGGATAGCCAAG +
Preference number: 5 (lower is better)
Translates to: PKNSIYTGWYPRFPQETAEEVGR*VGRIAK
Trigger: CTTGGCTATCCTCCCCACCAACCTGCCTACCTCCTC...AGCTGTTTCCTGTGGAAACCTGGGGTACCAGCCTGTATAGATGCTATTCTTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CAA 90 bp GCACATAGGGCAGAAGGGGAAGTCCCCATTAACATGAAGCAAAGGGCTATGCAGCGACCCACGACCTTCTaGCCCTTGTGTGTACAGAGC +
Preference number: 5 (lower is better)
Translates to: AHRAEGEVPINMKQRAMQRPTTF*PLCVQS
Trigger: GCTCTGTACACACAAGGGCAAGAAGGTCGTGGGTCG...CTGCATAGCCCTTTGCTTCATGTTAATGGGGACTTCCCCTTCTGCCCTATGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CAA 90 bp AGCATCTATACAGGCTGGTACCCCAGGTTTCCACAGGAAACAGCTGCTGGCAGCGTCCTCTTCCTTGGCTaGCTGTTTGGCTGCATTCTG +
Preference number: 5 (lower is better)
Translates to: SIYTGWYPRFPQETAAGSVLFLG*LFGCIL
Trigger: CAGAATGCAGCCAAACAGCAAGCCAAGGAAGAGGAC...GCTGCCAGCAGCTGTTTCCTGTGGAAACCTGGGGTACCAGCCTGTATAGATGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CAA 90 bp CATGAAGCAAAGGGCTATGCAGCCCCCAAGAATAGCATCTATACAGGCTGGTACGTGATACCGCCACTCTaGGCCCAGTCTACGAGGGAC +
Preference number: 5 (lower is better)
Translates to: HEAKGYAAPKNSIYTGWYVIPPL*AQSTRD
Trigger: GTCCCTCGTAGACTGGGCCAAGAGTGGCGGTATCAC...GTACCAGCCTGTATAGATGCTATTCTTGGGGGCTGCATAGCCCTTTGCTTCATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CAA 90 bp AGCATCTATACAGGCTGGTACCCCAGGTTTCCACAGGAAACAGCTGCTGGCAGCAAGGATTTTCGGTGTTaGCCTTGGGTCTTGCCCCGT +
Preference number: 5 (lower is better)
Translates to: SIYTGWYPRFPQETAAGSKDFRC*PWVLPR
Trigger: ACGGGGCAAGACCCAAGGCAAACACCGAAAATCCTT...GCTGCCAGCAGCTGTTTCCTGTGGAAACCTGGGGTACCAGCCTGTATAGATGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CAA 90 bp CCCAAGAATAGCATCTATACAGGCTGGTACCCCAGGTTTCCACAGGAAACAGCTACTGGACCAGAAGACTaGGCCTGCAGTGGGGCAGCT +
Preference number: 5 (lower is better)
Translates to: PKNSIYTGWYPRFPQETATGPED*ACSGAA
Trigger: AGCTGCCCCACTGCAGGCCAAGTCTTCTGGTCCAGT...AGCTGTTTCCTGTGGAAACCTGGGGTACCAGCCTGTATAGATGCTATTCTTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CAA 90 bp CATGAAGCAAAGGGCTATGCAGCCCCCAAGAATAGCATCTATACAGGCTGGTACGCTGCAGCTGTTGCTTaGGCTCCTCTGCCTCAGCCA +
Preference number: 5 (lower is better)
Translates to: HEAKGYAAPKNSIYTGWYAAAVA*APLPQP
Trigger: TGGCTGAGGCAGAGGAGCCAAAGCAACAGCTGCAGC...GTACCAGCCTGTATAGATGCTATTCTTGGGGGCTGCATAGCCCTTTGCTTCATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CAA 90 bp CATCTATACAGGCTGGTACCCCAGGTTTCCACAGGAAACAGCTGCTGGCAGCTATCTTGGGGCCGTCTTTaGCGCTTTGGAGTGCTTAGG +
Preference number: 5 (lower is better)
Translates to: HLYRLVPQVSTGNSCWQLSWGRL*RFGVLR
Trigger: CCTAAGCACTCCAAAGCGCAAAAGACGGCCCCAAGA...TAGCTGCCAGCAGCTGTTTCCTGTGGAAACCTGGGGTACCAGCCTGTATAGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CAA 90 bp CATCTATACAGGCTGGTACCCCAGGTTTCCACAGGAAACAGCTGCTGGCAGCTAGCGAGGTTGCCACACTaGGTGGCATCAATGATGGTG +
Preference number: 5 (lower is better)
Translates to: HLYRLVPQVSTGNSCWQLARLPH*VASMMV
Trigger: CACCATCATTGATGCCACCAAGTGTGGCAACCTCGC...TAGCTGCCAGCAGCTGTTTCCTGTGGAAACCTGGGGTACCAGCCTGTATAGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS GCA 90 bp ATGAGGAAGAGGAAGACGAGCTGCCACTCTCGGAGTCTGATGTGCTaGCATTTTCACCATCTGAATCCGCATACAGAGAGCACTGGGAGG +
Preference number: 5 (lower is better)
Translates to: MRKRKTSCHSRSLMC*HFHHLNPHTESTGR
Trigger: CCTCCCAGTGCTCTCTGTATGCGGATTCAGATGGTGAAAATGGCAGCACATCAGACTCCGAGAGTGGCAGCTCGTCTTCCTCTTCCTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS GCA 90 bp ACGATGAGGAAGAGGAAGACGAGCTGCCACTCTCGGAGTCTGATGTaGTGCCATTTTCACCATCTGAATCCGCATACAGAGAGCACTGGG +
Preference number: 5 (lower is better)
Translates to: TMRKRKTSCHSRSLM*CHFHHLNPHTESTG
Trigger: CCCAGTGCTCTCTGTATGCGGATTCAGATGGTGAAAATGGCAGCACATCAGACTCCGAGAGTGGCAGCTCGTCTTCCTCTTCCTCATCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS CCA 90 bp GATGTGCTGCCATTTTCACCATCTGAATCCGCATACAGAGAGCACTaGGAGGACGAGTCACTGTCCTCATCCTCACCATCCGATGCCTCT +
Preference number: 5 (lower is better)
Translates to: DVLPFSPSESAYREH*EDESLSSSSPSDAS
Trigger: AGAGGCATCGGATGGTGAGGATGAGGACAGTGACTCGTCCTCCCAGTGCTCTCTGTATGCGGATTCAGATGGTGAAAATGGCAGCACATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CAA 90 bp GCACATAGGGCAGAAGGGGAAGTCCCCATTAACATGAAGCAAAGGGCTATGCAGGTGAGGTGGAGGTTTTaGACAGTTTCCTTGGCGCCC +
Preference number: 5 (lower is better)
Translates to: AHRAEGEVPINMKQRAMQVRWRF*TVSLAP
Trigger: GGGCGCCAAGGAAACTGTCAAAAACCTCCACCTCAC...CTGCATAGCCCTTTGCTTCATGTTAATGGGGACTTCCCCTTCTGCCCTATGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CAA 90 bp CCAAGAATAGCATCTATACAGGCTGGTACCCCAGGTTTCCACAGGAAACAGCTGTGTGTAGGGGGTTCCTaGGGAGGACTGAGGGGTGAA +
Preference number: 5 (lower is better)
Translates to: PRIASIQAGTPGFHRKQLCVGGS*GGLRGE
Trigger: TTCACCCCTCAGTCCTCCCAAGGAACCCCCTACACA...CAGCTGTTTCCTGTGGAAACCTGGGGTACCAGCCTGTATAGATGCTATTCTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CAA 90 bp CATGAAGCAAAGGGCTATGCAGCCCCCAAGAATAGCATCTATACAGGCTGGTACCGACCCACGACCTTCTaGCCCTTGTGTGTACAGAGC +
Preference number: 5 (lower is better)
Translates to: HEAKGYAAPKNSIYTGWYRPTTF*PLCVQS
Trigger: GCTCTGTACACACAAGGGCAAGAAGGTCGTGGGTCG...GTACCAGCCTGTATAGATGCTATTCTTGGGGGCTGCATAGCCCTTTGCTTCATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS CCA 90 bp TGTGATACCGCCACTCTTGGCCCAGTCTACGAGGGACAGCATGCCTaGCTCTTTGAGCTTCATCTTTTCTTTGTCCTCTTCCTTGGCTTG +
Preference number: 5 (lower is better)
Translates to: CDTATLGPVYEGQHA*LFELHLFFVLFLGL
Trigger: CAAGCCAAGGAAGAGGACAAAGAAAAGATGAAGCTCAAAGAGCCAGGCATGCTGTCCCTCGTAGACTGGGCCAAGAGTGGCGGTATCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS CCA 90 bp ATCTCATCAGCGGCAATGGGTTCCATGGCAAACAGACCCCACTCATaGATACGGCTCCGGCCAAATCGGAGTTTCTTCTTCCGAAACTTG +
Preference number: 5 (lower is better)
Translates to: ISSAAMGSMANRPHS*IRLRPNRSFFFRNL
Trigger: CAAGTTTCGGAAGAAGAAACTCCGATTTGGCCGGAGCCGTATCCATGAGTGGGGTCTGTTTGCCATGGAACCCATTGCCGCTGATGAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CAA 90 bp CCAAGAATAGCATCTATACAGGCTGGTACCCCAGGTTTCCACAGGAAACAGCTGTTTTTGACAGTTTCCTaGGCGCCCCGAGTGCTGGTG +
Preference number: 5 (lower is better)
Translates to: PRIASIQAGTPGFHRKQLFLTVS*APRVLV
Trigger: CACCAGCACTCGGGGCGCCAAGGAAACTGTCAAAAA...CAGCTGTTTCCTGTGGAAACCTGGGGTACCAGCCTGTATAGATGCTATTCTTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CAA 90 bp AGCATCTATACAGGCTGGTACCCCAGGTTTCCACAGGAAACAGCTGCTGGCAGCGCCAAGAAAGAAAACTaGGAGCGTTGTTCCTTCAGC +
Preference number: 5 (lower is better)
Translates to: SIYTGWYPRFPQETAAGSAKKEN*ERCSFS
Trigger: GCTGAAGGAACAACGCTCCAAGTTTTCTTTCTTGGC...GCTGCCAGCAGCTGTTTCCTGTGGAAACCTGGGGTACCAGCCTGTATAGATGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CAA 90 bp GCACATAGGGCAGAAGGGGAAGTCCCCATTAACATGAAGCAAAGGGCTATGCAGACGACCTTCTTGCCCTaGTGTGTACAGAGCATAGGG +
Preference number: 5 (lower is better)
Translates to: AHRAEGEVPINMKQRAMQTTFLP*CVQSIG
Trigger: CCCTATGCTCTGTACACACAAGGGCAAGAAGGTCGT...CTGCATAGCCCTTTGCTTCATGTTAATGGGGACTTCCCCTTCTGCCCTATGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CAA 90 bp TCCACAGGAAACAGCTGCTGGCAGCTACAAAACATTTACAGCTTCTTCTTCGCAGTTTTCCGGCGTTTCTaGGGTGGGGGTAGGAGAGGG +
Preference number: 5 (lower is better)
Translates to: STGNSCWQLQNIYSFFFAVFRRF*GGGRRG
Trigger: CCCTCTCCTACCCCCACCCAAGAAACGCCGGAAAAC...TGCGAAGAAGAAGCTGTAAATGTTTTGTAGCTGCCAGCAGCTGTTTCCTGTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CAA 90 bp CATCTATACAGGCTGGTACCCCAGGTTTCCACAGGAAACAGCTGCTGGCAGCTATTTGGAGTGCTTAGGTaGGTGATTGTGTGCTGGACC +
Preference number: 5 (lower is better)
Translates to: HLYRLVPQVSTGNSCWQLFGVLR*VIVCWT
Trigger: GGTCCAGCACACAATCACCAACCTAAGCACTCCAAA...TAGCTGCCAGCAGCTGTTTCCTGTGGAAACCTGGGGTACCAGCCTGTATAGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CAA 90 bp CCCAAGAATAGCATCTATACAGGCTGGTACCCCAGGTTTCCACAGGAAACAGCTGCGAGGTTGCCACACTaGGTGGCATCAATGATGGTG +
Preference number: 5 (lower is better)
Translates to: PKNSIYTGWYPRFPQETAARLPH*VASMMV
Trigger: CACCATCATTGATGCCACCAAGTGTGGCAACCTCGC...AGCTGTTTCCTGTGGAAACCTGGGGTACCAGCCTGTATAGATGCTATTCTTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS CCA 90 bp ACCATCTTTCGATTAAGGTCTCGCTGCATAATGCTCTTCATCTCTTaGACAAGGGTAGCCAGCACACGACCCACTGTGCCTGCTGATGGT +
Preference number: 5 (lower is better)
Translates to: TIFRLRSRCIMLFIS*TRVASTRPTVPADG
Trigger: ACCATCAGCAGGCACAGTGGGTCGTGTGCTGGCTACCCTTGTCCAAGAGATGAAGAGCATTATGCAGCGAGACCTTAATCGAAAGATGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CAA 90 bp TCCACAGGAAACAGCTGCTGGCAGCTACAAAACATTTACAGCTTCTTCTTCGCATCTGACCGCCGGGGTTaGAAGGAGGTTGAAGTGGTG +
Preference number: 5 (lower is better)
Translates to: STGNSCWQLQNIYSFFFASDRRG*KEVEVV
Trigger: CACCACTTCAACCTCCTTCAAACCCCGGCGGTCAGA...TGCGAAGAAGAAGCTGTAAATGTTTTGTAGCTGCCAGCAGCTGTTTCCTGTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CAA 90 bp CATGAAGCAAAGGGCTATGCAGCCCCCAAGAATAGCATCTATACAGGCTGGTACGTCCTCTTCCTTGGCTaGCTGTTTGGCTGCATTCTG +
Preference number: 5 (lower is better)
Translates to: HEAKGYAAPKNSIYTGWYVLFLG*LFGCIL
Trigger: CAGAATGCAGCCAAACAGCAAGCCAAGGAAGAGGAC...GTACCAGCCTGTATAGATGCTATTCTTGGGGGCTGCATAGCCCTTTGCTTCATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CAA 90 bp CATCTATACAGGCTGGTACCCCAGGTTTCCACAGGAAACAGCTGCTGGCAGCTATCTTTCCGTTTTACCTaGAATGAAGGCAACCGCAGG +
Preference number: 5 (lower is better)
Translates to: HLYRLVPQVSTGNSCWQLSFRFT*NEGNRR
Trigger: CCTGCGGTTGCCTTCATTCAAGGTAAAACGGAAAGA...TAGCTGCCAGCAGCTGTTTCCTGTGGAAACCTGGGGTACCAGCCTGTATAGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CAA 90 bp TTTCCACAGGAAACAGCTGCTGGCAGCTACAAAACATTTACAGCTTCTTCTTCGACTGGACCAGAAGACTaGGCCTGCAGTGGGGCAGCT +
Preference number: 5 (lower is better)
Translates to: FPQETAAGSYKTFTASSSTGPED*ACSGAA
Trigger: AGCTGCCCCACTGCAGGCCAAGTCTTCTGGTCCAGT...CGAAGAAGAAGCTGTAAATGTTTTGTAGCTGCCAGCAGCTGTTTCCTGTGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS TCA 90 bp TTCTTCATCTTCCTCATCTTCATCATCATCATCCTCATCCTTCTCTaGGGAAGACTCCTGGGACGCCTCCTCCCCTTCACTGTCCAGAGT +
Preference number: 5 (lower is better)
Translates to: FFIFLIFIIIILILL*GRLLGRLLPFTVQS
Trigger: ACTCTGGACAGTGAAGGGGAGGAGGCGTCCCAGGAGTCTTCCTCAGAGAAGGATGAGGATGATGATGATGAAGATGAGGAAGATGAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS GCA 90 bp GCTCCAAAGGCCACATTCTCGACCATCTTTCGATTAAGGTCTCGCTaGATAATGCTCTTCATCTCTTGGACAAGGGTAGCCAGCACACGA +
Preference number: 5 (lower is better)
Translates to: APKATFSTIFRLRSR*IMLFISWTRVASTR
Trigger: TCGTGTGCTGGCTACCCTTGTCCAAGAGATGAAGAGCATTATGCAGCGAGACCTTAATCGAAAGATGGTCGAGAATGTGGCCTTTGGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CAA 90 bp TCCACAGGAAACAGCTGCTGGCAGCTACAAAACATTTACAGCTTCTTCTTCGCATTTTTGACAGTTTCCTaGGCGCCCCGAGTGCTGGTG +
Preference number: 5 (lower is better)
Translates to: STGNSCWQLQNIYSFFFAFLTVS*APRVLV
Trigger: CACCAGCACTCGGGGCGCCAAGGAAACTGTCAAAAA...TGCGAAGAAGAAGCTGTAAATGTTTTGTAGCTGCCAGCAGCTGTTTCCTGTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CAA 90 bp CATGAAGCAAAGGGCTATGCAGCCCCCAAGAATAGCATCTATACAGGCTGGTACTTTGGAGTGCTTAGGTaGGTGATTGTGTGCTGGACC +
Preference number: 5 (lower is better)
Translates to: HEAKGYAAPKNSIYTGWYFGVLR*VIVCWT
Trigger: GGTCCAGCACACAATCACCAACCTAAGCACTCCAAA...GTACCAGCCTGTATAGATGCTATTCTTGGGGGCTGCATAGCCCTTTGCTTCATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS GCA 90 bp CCTGGCTCTTTGAGCTTCATCTTTTCTTTGTCCTCTTCCTTGGCTTaGTGTTTGGCTGCATTCTGGAATGGCTTGGCCTTCTCTTCCTTG +
Preference number: 5 (lower is better)
Translates to: PGSLSFIFSLSSSLA*CLAAFWNGLAFSSL
Trigger: CAAGGAAGAGAAGGCCAAGCCATTCCAGAATGCAGCCAAACAGCAAGCCAAGGAAGAGGACAAAGAAAAGATGAAGCTCAAAGAGCCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CAA 90 bp CCCAAGAATAGCATCTATACAGGCTGGTACCCCAGGTTTCCACAGGAAACAGCTGCCAAGAAAGAAAACTaGGAGCGTTGTTCCTTCAGC +
Preference number: 5 (lower is better)
Translates to: PKNSIYTGWYPRFPQETAAKKEN*ERCSFS
Trigger: GCTGAAGGAACAACGCTCCAAGTTTTCTTTCTTGGC...AGCTGTTTCCTGTGGAAACCTGGGGTACCAGCCTGTATAGATGCTATTCTTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CAA 90 bp GCACATAGGGCAGAAGGGGAAGTCCCCATTAACATGAAGCAAAGGGCTATGCAGGCCTCTTTTCCTCACTaGCCTCTGAAATTTCTGATG +
Preference number: 5 (lower is better)
Translates to: AHRAEGEVPINMKQRAMQASFPH*PLKFLM
Trigger: CATCAGAAATTTCAGAGGCAAGTGAGGAAAAGAGGC...CTGCATAGCCCTTTGCTTCATGTTAATGGGGACTTCCCCTTCTGCCCTATGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CAA 90 bp GCACATAGGGCAGAAGGGGAAGTCCCCATTAACATGAAGCAAAGGGCTATGCAGAGACACGGAATCTTGTaGTCTTCTAGTGGGAACTTG +
Preference number: 5 (lower is better)
Translates to: AHRAEGEVPINMKQRAMQRHGIL*SSSGNL
Trigger: CAAGTTCCCACTAGAAGACAACAAGATTCCGTGTCT...CTGCATAGCCCTTTGCTTCATGTTAATGGGGACTTCCCCTTCTGCCCTATGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CAA 90 bp CCCAAGAATAGCATCTATACAGGCTGGTACCCCAGGTTTCCACAGGAAACAGCTCACAGACACGGAATCTaGTTGTCTTCTAGTGGGAAC +
Preference number: 5 (lower is better)
Translates to: PKNSIYTGWYPRFPQETAHRHGI*LSSSGN
Trigger: GTTCCCACTAGAAGACAACAAGATTCCGTGTCTGTG...AGCTGTTTCCTGTGGAAACCTGGGGTACCAGCCTGTATAGATGCTATTCTTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CAA 90 bp CATGAAGCAAAGGGCTATGCAGCCCCCAAGAATAGCATCTATACAGGCTGGTACCACAGACACGGAATCTaGTTGTCTTCTAGTGGGAAC +
Preference number: 5 (lower is better)
Translates to: HEAKGYAAPKNSIYTGWYHRHGI*LSSSGN
Trigger: GTTCCCACTAGAAGACAACAAGATTCCGTGTCTGTG...GTACCAGCCTGTATAGATGCTATTCTTGGGGGCTGCATAGCCCTTTGCTTCATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CAA 90 bp CCAAGAATAGCATCTATACAGGCTGGTACCCCAGGTTTCCACAGGAAACAGCTGAGAAAACTTGGAGCGTaGTTCCTTCAGCAGCATTTC +
Preference number: 5 (lower is better)
Translates to: PRIASIQAGTPGFHRKQLRKLGA*FLQQHF
Trigger: GAAATGCTGCTGAAGGAACAACGCTCCAAGTTTTCT...CAGCTGTTTCCTGTGGAAACCTGGGGTACCAGCCTGTATAGATGCTATTCTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CAA 90 bp CATGAAGCAAAGGGCTATGCAGCCCCCAAGAATAGCATCTATACAGGCTGGTACAGAAAACTTGGAGCGTaGTTCCTTCAGCAGCATTTC +
Preference number: 5 (lower is better)
Translates to: HEAKGYAAPKNSIYTGWYRKLGA*FLQQHF
Trigger: GAAATGCTGCTGAAGGAACAACGCTCCAAGTTTTCT...GTACCAGCCTGTATAGATGCTATTCTTGGGGGCTGCATAGCCCTTTGCTTCATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CAA 90 bp TTTCCACAGGAAACAGCTGCTGGCAGCTACAAAACATTTACAGCTTCTTCTTCGACGACCTTCTTGCCCTaGTGTGTACAGAGCATAGGG +
Preference number: 5 (lower is better)
Translates to: FPQETAAGSYKTFTASSSTTFLP*CVQSIG
Trigger: CCCTATGCTCTGTACACACAAGGGCAAGAAGGTCGT...CGAAGAAGAAGCTGTAAATGTTTTGTAGCTGCCAGCAGCTGTTTCCTGTGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CAA 90 bp TTTCCACAGGAAACAGCTGCTGGCAGCTACAAAACATTTACAGCTTCTTCTTCGTCCTTGGCTTGCTGTTaGGCTGCATTCTGGAATGGC +
Preference number: 5 (lower is better)
Translates to: FPQETAAGSYKTFTASSSSLACC*AAFWNG
Trigger: GCCATTCCAGAATGCAGCCAAACAGCAAGCCAAGGA...CGAAGAAGAAGCTGTAAATGTTTTGTAGCTGCCAGCAGCTGTTTCCTGTGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CAA 90 bp CCCAAGAATAGCATCTATACAGGCTGGTACCCCAGGTTTCCACAGGAAACAGCTGCCTCTTTTCCTCACTaGCCTCTGAAATTTCTGATG +
Preference number: 5 (lower is better)
Translates to: PKNSIYTGWYPRFPQETAASFPH*PLKFLM
Trigger: CATCAGAAATTTCAGAGGCAAGTGAGGAAAAGAGGC...AGCTGTTTCCTGTGGAAACCTGGGGTACCAGCCTGTATAGATGCTATTCTTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CAA 90 bp TTTCCACAGGAAACAGCTGCTGGCAGCTACAAAACATTTACAGCTTCTTCTTCGGGAAGATGGAGTATCTaGTCGGCTGCTGGAGAAATT +
Preference number: 5 (lower is better)
Translates to: FPQETAAGSYKTFTASSSGRWSI*SAAGEI
Trigger: AATTTCTCCAGCAGCCGACAAGATACTCCATCTTCC...CGAAGAAGAAGCTGTAAATGTTTTGTAGCTGCCAGCAGCTGTTTCCTGTGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CAA 90 bp ATAAAAATGTGGTGTTGGGTTTCACTATTAACATTATGTACAATCCAGCCCAACGCCTGGTTCTGTCCATaGGCCTTTGGTGACTCCCGG +
Preference number: 5 (lower is better)
Translates to: IKMWCWVSLLTLCTIQPNAWFCP*AFGDSR
Trigger: CCGGGAGTCACCAAAGGCCAATGGACAGAACCAGGC...GTTGGGCTGGATTGTACATAATGTTAATAGTGAAACCCAACACCACATTTTTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CAA 90 bp ATAAAAATGTGGTGTTGGGTTTCACTATTAACATTATGTACAATCCAGCCCAACGCTGCAGCTGTTGCTTaGGCTCCTCTGCCTCAGCCA +
Preference number: 5 (lower is better)
Translates to: IKMWCWVSLLTLCTIQPNAAAVA*APLPQP
Trigger: TGGCTGAGGCAGAGGAGCCAAAGCAACAGCTGCAGC...GTTGGGCTGGATTGTACATAATGTTAATAGTGAAACCCAACACCACATTTTTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CAA 90 bp TCCACAGGAAACAGCTGCTGGCAGCTACAAAACATTTACAGCTTCTTCTTCGCAAGACACGGAATCTTGTaGTCTTCTAGTGGGAACTTG +
Preference number: 5 (lower is better)
Translates to: STGNSCWQLQNIYSFFFARHGIL*SSSGNL
Trigger: CAAGTTCCCACTAGAAGACAACAAGATTCCGTGTCT...TGCGAAGAAGAAGCTGTAAATGTTTTGTAGCTGCCAGCAGCTGTTTCCTGTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS CCA 90 bp TCATGTCTTCCAAGTCAAGGCCTGAGTTCCAAATATCATACAAGATaGTCATCTGCTCAAATTCACTTCTCGGCTCAAAGGAAGGAGGAG +
Preference number: 5 (lower is better)
Translates to: SCLPSQGLSSKYHTR*SSAQIHFSAQRKEE
Trigger: CTCCTCCTTCCTTTGAGCCGAGAAGTGAATTTGAGCAGATGACCATCTTGTATGATATTTGGAACTCAGGCCTTGACTTGGAAGACATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CAA 90 bp AATGTGGTGTTGGGTTTCACTATTAACATTATGTACAATCCAGCCCAACAAGAAATGAACCTGGCGAGGTaGCCACACTTGGTGGCATCA +
Preference number: 5 (lower is better)
Translates to: NVVLGFTINIMYNPAQQEMNLAR*PHLVAS
Trigger: TGATGCCACCAAGTGTGGCAACCTCGCCAGGTTCAT...TTCTTGTTGGGCTGGATTGTACATAATGTTAATAGTGAAACCCAACACCACATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS TCA 90 bp ATTTCCGGCACATATCCTTCAGGAAGGTTTCCCTCACATTGTCATTaGGCCTCGCAAAAGTTACTTCCTTCAGTGGTATCTGTCCAATAT +
Preference number: 5 (lower is better)
Translates to: ISGTYPSGRFPSHCH*ASQKLLPSVVSVQY
Trigger: ATATTGGACAGATACCACTGAAGGAAGTAACTTTTGCGAGGCTCAATGACAATGTGAGGGAAACCTTCCTGAAGGATATGTGCCGGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
ENSMUST00000126761.8
ENSMUST00000144406.8
CDS-3UTR CAA 90 bp ATAAAAATGTGGTGTTGGGTTTCACTATTAACATTATGTACAATCCAGCCCAACTTGGCCTTCTCTTCCTaGCTCTCCCACCACTGGTCA +
Preference number: 5 (lower is better)
Translates to: IKMWCWVSLLTLCTIQPNLAFSS*LSHHWS
Trigger: TGACCAGTGGTGGGAGAGCAAGGAAGAGAAGGCCAA...GTTGGGCTGGATTGTACATAATGTTAATAGTGAAACCCAACACCACATTTTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CAA 90 bp ATAAAAATGTGGTGTTGGGTTTCACTATTAACATTATGTACAATCCAGCCCAACTCTTGGGGCCGTCTTTaGCGCTTTGGAGTGCTTAGG +
Preference number: 5 (lower is better)
Translates to: IKMWCWVSLLTLCTIQPNSWGRL*RFGVLR
Trigger: CCTAAGCACTCCAAAGCGCAAAAGACGGCCCCAAGA...GTTGGGCTGGATTGTACATAATGTTAATAGTGAAACCCAACACCACATTTTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CAA 90 bp TCCACAGGAAACAGCTGCTGGCAGCTACAAAACATTTACAGCTTCTTCTTCGCAATAGTACTTCATTCGTaGTTGGCCTTTGATATCAAG +
Preference number: 5 (lower is better)
Translates to: STGNSCWQLQNIYSFFFAIVLHS*LAFDIK
Trigger: CTTGATATCAAAGGCCAACAACGAATGAAGTACTAT...TGCGAAGAAGAAGCTGTAAATGTTTTGTAGCTGCCAGCAGCTGTTTCCTGTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CAA 90 bp ATAAAAATGTGGTGTTGGGTTTCACTATTAACATTATGTACAATCCAGCCCAACAAGGATTTTCGGTGTTaGCCTTGGGTCTTGCCCCGT +
Preference number: 5 (lower is better)
Translates to: IKMWCWVSLLTLCTIQPNKDFRC*PWVLPR
Trigger: ACGGGGCAAGACCCAAGGCAAACACCGAAAATCCTT...GTTGGGCTGGATTGTACATAATGTTAATAGTGAAACCCAACACCACATTTTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS CCA 90 bp TTCCCTCACATTGTCATTGAGCCTCGCAAAAGTTACTTCCTTCAGTaGTATCTGTCCAATATAGAACTCATCCAGCTTAAACTTAGGAAC +
Preference number: 5 (lower is better)
Translates to: FPHIVIEPRKSYFLQ*YLSNIELIQLKLRN
Trigger: GTTCCTAAGTTTAAGCTGGATGAGTTCTATATTGGACAGATACCACTGAAGGAAGTAACTTTTGCGAGGCTCAATGACAATGTGAGGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
ENSMUST00000126761.8
ENSMUST00000144406.8
CDS-3UTR CAA 90 bp AATGTGGTGTTGGGTTTCACTATTAACATTATGTACAATCCAGCCCAACAAGAAGGAAGATGGAGTATCTaGTCGGCTGCTGGAGAAATT +
Preference number: 5 (lower is better)
Translates to: NVVLGFTINIMYNPAQQEGRWSI*SAAGEI
Trigger: AATTTCTCCAGCAGCCGACAAGATACTCCATCTTCC...TTCTTGTTGGGCTGGATTGTACATAATGTTAATAGTGAAACCCAACACCACATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CAA 90 bp AATGTGGTGTTGGGTTTCACTATTAACATTATGTACAATCCAGCCCAACAAGAAGTACTTCATTCGTTGTaGGCCTTTGATATCAAGCTG +
Preference number: 5 (lower is better)
Translates to: NVVLGFTINIMYNPAQQEVLHSL*AFDIKL
Trigger: CAGCTTGATATCAAAGGCCAACAACGAATGAAGTAC...TTCTTGTTGGGCTGGATTGTACATAATGTTAATAGTGAAACCCAACACCACATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS-3UTR CAA 90 bp AATGTGGTGTTGGGTTTCACTATTAACATTATGTACAATCCAGCCCAACAAGAAATAGTACTTCATTCGTaGTTGGCCTTTGATATCAAG +
Preference number: 5 (lower is better)
Translates to: NVVLGFTINIMYNPAQQEIVLHS*LAFDIK
Trigger: CTTGATATCAAAGGCCAACAACGAATGAAGTACTAT...TTCTTGTTGGGCTGGATTGTACATAATGTTAATAGTGAAACCCAACACCACATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS CCA 72 bp GGCGTGGGGGAGTCCGGGCTTCTTCTCTCTCAGGGCTaGGTGCCCCACCACCACCACCACCACCACCACCAC +
Preference number: 6 (lower is better)
Translates to: GVGESGLLLSQG*VPHHHHHHHHH
Trigger: GTGGTGGTGGTGGTGGTGGTGGTGGTGGGGCACCCAGCCCTGAGAGAGAAGAAGCCCGGACTCCCCCACGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS TCA 72 bp CTCCCTATGAGGCAGCCGCGCCTCCTCTCCCGAGACTaGGGAAGAGGGCAGGGGCTCGGCTGCCATAGGCAA +
Preference number: 6 (lower is better)
Translates to: LPMRQPRLLSRD*GRGQGLGCHRQ
Trigger: TTGCCTATGGCAGCCGAGCCCCTGCCCTCTTCCTCAGTCTCGGGAGAGGAGGCGCGGCTGCCTCATAGGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS CCA 72 bp GTGCTGAGCAAAGGGCACACTCTCGTTGGTGGTCTCTaGGGCTGGGGAGCCAGAGCGTGCAGGGGAAGCTGG +
Preference number: 6 (lower is better)
Translates to: VLSKGHTLVGGL*GWGARACRGSW
Trigger: CCAGCTTCCCCTGCACGCTCTGGCTCCCCAGCCCCAGAGACCACCAACGAGAGTGTGCCCTTTGCTCAGCAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS CCA 72 bp GGTGGGGGTGGGAGTGGTGGCCTTCTTCTTCGAGTGTaGGAGCGGAGGCTACGCCTCCTGATTGCCCCTTCC +
Preference number: 6 (lower is better)
Translates to: GGGGSGGLLLRV*ERRLRLLIAPS
Trigger: GGAAGGGGCAATCAGGAGGCGTAGCCTCCGCTCCCACACTCGAAGAAGAAGGCCACCACTCCCACCCCCACC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS TCA 72 bp TCCGACCCCCTCGGGCGACCTCCTCAGGCCAACTCTTaGCCAGAGACGCATGGTCCAGGGGGAGGTTACGAA +
Preference number: 6 (lower is better)
Translates to: SDPLGRPPQANS*PETHGPGGGYE
Trigger: TTCGTAACCTCCCCCTGGACCATGCGTCTCTGGTCAAGAGTTGGCCTGAGGAGGTCGCCCGAGGGGGTCGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS CCA 72 bp CGGGCTTCAGTCGTCTCAGCGGCTGCACCAGAACCCTaGAACTTCTCACTCAAGGCCTTGCCCCCAGTGGGC +
Preference number: 6 (lower is better)
Translates to: RASVVSAAAPEP*NFSLKALPPVG
Trigger: GCCCACTGGGGGCAAGGCCTTGAGTGAGAAGTTCCAGGGTTCTGGTGCAGCCGCTGAGACGACTGAAGCCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
ENSMUST00000144406.8
CDS CCA 72 bp CCAAACTGCTGTGCTGAGCAAAGGGCACACTCTCGTTaGTGGTCTCTGGGGCTGGGGAGCCAGAGCGTGCAG +
Preference number: 6 (lower is better)
Translates to: PNCCAEQRAHSR*WSLGLGSQSVQ
Trigger: CTGCACGCTCTGGCTCCCCAGCCCCAGAGACCACCAACGAGAGTGTGCCCTTTGCTCAGCACAGCAGTTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS CAA 90 bp CCAAAAGCCCCGCCAGGAGGACCAGCTGAGGCTGCAGTCAATCCCTaGCCCTGCCGTAACTGGTGGAGCCGTGTTAACATCTGGGTCTGC +
Preference number: 6 (lower is better)
Translates to: PKAPPGGPAEAAVNP*PCRNWWSRVNIWVC
Trigger: GCAGACCCAGATGTTAACACGGCTCCACCAGTTACGGCAGGGCAAGGGATTGACTGCAGCCTCAGCTGGTCCTCCTGGCGGGGCTTTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS GCA 72 bp GGAAGACCGTCGGCGGGCTTCAGTCGTCTCAGCGGCTaGACCAGAACCCTGGAACTTCTCACTCAAGGCCTT +
Preference number: 6 (lower is better)
Translates to: GRPSAGFSRLSG*TRTLELLTQGL
Trigger: AAGGCCTTGAGTGAGAAGTTCCAGGGTTCTGGTGCAGCCGCTGAGACGACTGAAGCCCGCCGACGGTCTTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
ENSMUST00000144406.8
CDS CCA 72 bp CTCCGGAAGAACATGGAGAAGCCTGGTTCTGTCCATTaGCCTTTGGTGACTCCCGGGCAGCCCCTGGCTCTC +
Preference number: 6 (lower is better)
Translates to: LRKNMEKPGSVH*PLVTPGQPLAL
Trigger: GAGAGCCAGGGGCTGCCCGGGAGTCACCAAAGGCCAATGGACAGAACCAGGCTTCTCCATGTTCTTCCGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS CCA 72 bp GCCCCGTTCTTCATCTCGCTTCGGAGGCTTGGTCCCTaGACGTCCTGGTTCTCCAGCTTCCTTCTCTCGCTC +
Preference number: 6 (lower is better)
Translates to: APFFISLRRLGP*TSWFSSFLLSL
Trigger: GAGCGAGAGAAGGAAGCTGGAGAACCAGGACGTCCAGGGACCAAGCCTCCGAAGCGAGATGAAGAACGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS CCA 72 bp GCGACCTCCTCAGGCCAACTCTTGACCAGAGACGCATaGTCCAGGGGGAGGTTACGAATGGTCCGCTCTACG +
Preference number: 6 (lower is better)
Translates to: ATSSGQLLTRDA*SRGRLRMVRST
Trigger: CGTAGAGCGGACCATTCGTAACCTCCCCCTGGACCATGCGTCTCTGGTCAAGAGTTGGCCTGAGGAGGTCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS CAA 72 bp GGCCTCCCGGGAGTACGACCCACGACCTTCTTGCCCTaGTGTGTACAGAGCATAGGGCAAGCCATAGGCTGC +
Preference number: 6 (lower is better)
Translates to: GLPGVRPTTFLP*CVQSIGQAIGC
Trigger: GCAGCCTATGGCTTGCCCTATGCTCTGTACACACAAGGGCAAGAAGGTCGTGGGTCGTACTCCCGGGAGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS TCA 72 bp GGAAGGTGGGAAGCGCTCAGCCGTATTTTCGGCAAATaGAGCCCCAGAAGGGTCCTCTCTAGTTGCCCGGCG +
Preference number: 6 (lower is better)
Translates to: GRWEALSRIFGK*SPRRVLSSCPA
Trigger: CGCCGGGCAACTAGAGAGGACCCTTCTGGGGCTTCATTTGCCGAAAATACGGCTGAGCGCTTCCCACCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS CCA 72 bp GGGTCTTGCCCCGTTCTTCATCTCGCTTCGGAGGCTTaGTCCCTGGACGTCCTGGTTCTCCAGCTTCCTTCT +
Preference number: 6 (lower is better)
Translates to: GSCPVLHLASEA*SLDVLVLQLPS
Trigger: AGAAGGAAGCTGGAGAACCAGGACGTCCAGGGACCAAGCCTCCGAAGCGAGATGAAGAACGGGGCAAGACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS CAA 72 bp TCTCCGGAAGAACATGGAGAAGCCTGGTTCTGTCCATaGGCCTTTGGTGACTCCCGGGCAGCCCCTGGCTCT +
Preference number: 6 (lower is better)
Translates to: SPEEHGEAWFCP*AFGDSRAAPGS
Trigger: AGAGCCAGGGGCTGCCCGGGAGTCACCAAAGGCCAATGGACAGAACCAGGCTTCTCCATGTTCTTCCGGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS CAA 72 bp TGGGTCTTGCCCCGTTCTTCATCTCGCTTCGGAGGCTaGGTCCCTGGACGTCCTGGTTCTCCAGCTTCCTTC +
Preference number: 6 (lower is better)
Translates to: WVLPRSSSRFGG*VPGRPGSPASF
Trigger: GAAGGAAGCTGGAGAACCAGGACGTCCAGGGACCAAGCCTCCGAAGCGAGATGAAGAACGGGGCAAGACCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS CAA 90 bp ATGTTGCCCATGACAGAGGTGAGGTGGAGGTTTTTGACAGTTTCCTaGGCGCCCCGAGTGCTGGTGAAGAGCACACGGGCCAGGCCTAGG +
Preference number: 6 (lower is better)
Translates to: MLPMTEVRWRFLTVS*APRVLVKSTRARPR
Trigger: CCTAGGCCTGGCCCGTGTGCTCTTCACCAGCACTCGGGGCGCCAAGGAAACTGTCAAAAACCTCCACCTCACCTCTGTCATGGGCAACAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
ENSMUST00000126761.8
ENSMUST00000144406.8
CDS CAA 90 bp CCTGACCCAAAGGCAAAGGCCTCAATGCCTGTGATACCGCCACTCTaGGCCCAGTCTACGAGGGACAGCATGCCTGGCTCTTTGAGCTTC +
Preference number: 6 (lower is better)
Translates to: PDPKAKASMPVIPPL*AQSTRDSMPGSLSF
Trigger: GAAGCTCAAAGAGCCAGGCATGCTGTCCCTCGTAGACTGGGCCAAGAGTGGCGGTATCACAGGCATTGAGGCCTTTGCCTTTGGGTCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS CAA 90 bp TGTTTGCCTTGGGTCTTGCCCCGTTCTTCATCTCGCTTCGGAGGCTaGGTCCCTGGACGTCCTGGTTCTCCAGCTTCCTTCTCTCGCTCA +
Preference number: 6 (lower is better)
Translates to: CLPWVLPRSSSRFGG*VPGRPGSPASFSRS
Trigger: TGAGCGAGAGAAGGAAGCTGGAGAACCAGGACGTCCAGGGACCAAGCCTCCGAAGCGAGATGAAGAACGGGGCAAGACCCAAGGCAAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS TCA 72 bp GCCTGCGCAAAGCAGGGTCCAAAGCAGGATCCACTATaGGCTTGTAGTTCCGCCACTGGAAGCTCGGGGCTT +
Preference number: 6 (lower is better)
Translates to: ACAKQGPKQDPL*ACSSATGSSGL
Trigger: AAGCCCCGAGCTTCCAGTGGCGGAACTACAAGCTCATAGTGGATCCTGCTTTGGACCCTGCTTTGCGCAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
ENSMUST00000126761.8
ENSMUST00000143951.2
ENSMUST00000144406.8
CDS TCA 72 bp GAAGCCCTGACCCAAAGGCAAAGGCCTCAATGCCTGTaGTACCGCCACTCTTGGCCCAGTCTACGAGGGACA +
Preference number: 6 (lower is better)
Translates to: EALTQRQRPQCL*YRHSWPSLRGT
Trigger: TGTCCCTCGTAGACTGGGCCAAGAGTGGCGGTATCACAGGCATTGAGGCCTTTGCCTTTGGGTCAGGGCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS GCA 72 bp CTGCACCAGAACCCTGGAACTTCTCACTCAAGGCCTTaGCCCCAGTGGGCACAGTCTGAGGAGTGTAAGAGC +
Preference number: 6 (lower is better)
Translates to: LHQNPGTSHSRP*PQWAQSEECKS
Trigger: GCTCTTACACTCCTCAGACTGTGCCCACTGGGGGCAAGGCCTTGAGTGAGAAGTTCCAGGGTTCTGGTGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
ENSMUST00000144406.8
CDS GCA 72 bp GGGACTTTTCGAGAGACTGGACCAGAAGACTTGGCCTaGAGTGGGGCAGCTGTGGAAGGTTCTGGGACTGGT +
Preference number: 6 (lower is better)
Translates to: GTFRETGPEDLA*SGAAVEGSGTG
Trigger: ACCAGTCCCAGAACCTTCCACAGCTGCCCCACTGCAGGCCAAGTCTTCTGGTCCAGTCTCTCGAAAAGTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS CCA 72 bp AGCCCCAGAAGGGTCCTCTCTAGTTGCCCGGCGAGGTaGATAGGAAGTATGGCGCTGGTAACGATTCCAGCT +
Preference number: 6 (lower is better)
Translates to: SPRRVLSSCPAR*IGSMALVTIPA
Trigger: AGCTGGAATCGTTACCAGCGCCATACTTCCTATCCACCTCGCCGGGCAACTAGAGAGGACCCTTCTGGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS CCA 72 bp GCTGAGGCTGCAGTCAATCCCTTGCCCTGCCGTAACTaGTGGAGCCGTGTTAACATCTGGGTCTGCATCTGG +
Preference number: 6 (lower is better)
Translates to: AEAAVNPLPCRN*WSRVNIWVCIW
Trigger: CCAGATGCAGACCCAGATGTTAACACGGCTCCACCAGTTACGGCAGGGCAAGGGATTGACTGCAGCCTCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS CAA 72 bp ATGACAGAGGTGAGGTGGAGGTTTTTGACAGTTTCCTaGGCGCCCCGAGTGCTGGTGAAGAGCACACGGGCC +
Preference number: 6 (lower is better)
Translates to: MTEVRWRFLTVS*APRVLVKSTRA
Trigger: GGCCCGTGTGCTCTTCACCAGCACTCGGGGCGCCAAGGAAACTGTCAAAAACCTCCACCTCACCTCTGTCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
ENSMUST00000126761.8
ENSMUST00000144406.8
CDS CAA 72 bp AAGGCAAAGGCCTCAATGCCTGTGATACCGCCACTCTaGGCCCAGTCTACGAGGGACAGCATGCCTGGCTCT +
Preference number: 6 (lower is better)
Translates to: KAKASMPVIPPL*AQSTRDSMPGS
Trigger: AGAGCCAGGCATGCTGTCCCTCGTAGACTGGGCCAAGAGTGGCGGTATCACAGGCATTGAGGCCTTTGCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS TCA 72 bp TGGCTAGGGCATAGTTGTGTTCCAAGAGGATGTGGCTaGGTAGAGGGCTTGGGCGCTCAGCCTCATCTGAGG +
Preference number: 6 (lower is better)
Translates to: WLGHSCVPRGCG*VEGLGAQPHLR
Trigger: CCTCAGATGAGGCTGAGCGCCCAAGCCCTCTACTCAGCCACATCCTCTTGGAACACAACTATGCCCTAGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS CCA 72 bp GAGGCTGCAGTCAATCCCTTGCCCTGCCGTAACTGGTaGAGCCGTGTTAACATCTGGGTCTGCATCTGGAAG +
Preference number: 6 (lower is better)
Translates to: EAAVNPLPCRNW*SRVNIWVCIWK
Trigger: CTTCCAGATGCAGACCCAGATGTTAACACGGCTCCACCAGTTACGGCAGGGCAAGGGATTGACTGCAGCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS CCA 72 bp TTCATCTCGCTTCGGAGGCTTGGTCCCTGGACGTCCTaGTTCTCCAGCTTCCTTCTCTCGCTCAGGATCATC +
Preference number: 6 (lower is better)
Translates to: FISLRRLGPWTS*FSSFLLSLRII
Trigger: GATGATCCTGAGCGAGAGAAGGAAGCTGGAGAACCAGGACGTCCAGGGACCAAGCCTCCGAAGCGAGATGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS CAA 72 bp TGGAGTATCTTGTCGGCTGCTGGAGAAATTTGTATCTaGGGAGCAGGGAGTGCCATTGCCAGGGGTGCCCCC +
Preference number: 6 (lower is better)
Translates to: WSILSAAGEICI*GAGSAIARGAP
Trigger: GGGGGCACCCCTGGCAATGGCACTCCCTGCTCCCAAGATACAAATTTCTCCAGCAGCCGACAAGATACTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS TCA 72 bp ACACGGGCCAGGCCTAGGTGCTTTCGAGTGCGGGGATaGAGAAGGATCTCCACTTCTTCCACCTCTCCATAT +
Preference number: 6 (lower is better)
Translates to: TRARPRCFRVRG*RRISTSSTSPY
Trigger: ATATGGAGAGGTGGAAGAAGTGGAGATCCTTCTTCATCCCCGCACTCGAAAGCACCTAGGCCTGGCCCGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
ENSMUST00000126761.8
ENSMUST00000144406.8
CDS GCA 72 bp ACTCCCTGTAGGTGCTACATCTTCAAAATTAGCTGGTaGAGGAGGAGGTGTACAGGGCCCATGACCTGCCCC +
Preference number: 6 (lower is better)
Translates to: TPCRCYIFKISW*RRRCTGPMTCP
Trigger: GGGGCAGGTCATGGGCCCTGTACACCTCCTCCTGCACCAGCTAATTTTGAAGATGTAGCACCTACAGGGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS GCA 72 bp CCCTTGTGTGTACAGAGCATAGGGCAAGCCATAGGCTaGCTCTTGTGGAGGTGGAAAAGGGAGAAAGGCCTC +
Preference number: 6 (lower is better)
Translates to: PLCVQSIGQAIG*LLWRWKREKGL
Trigger: GAGGCCTTTCTCCCTTTTCCACCTCCACAAGAGGCAGCCTATGGCTTGCCCTATGCTCTGTACACACAAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS GCA 72 bp GCACACGACCCACTGTGCCTGCTGATGGTAGGACCTTaGTTTCTGCTATCTCTGCTTCCTCCCTATGAGGCA +
Preference number: 6 (lower is better)
Translates to: AHDPLCLLMVGP*FLLSLLPPYEA
Trigger: TGCCTCATAGGGAGGAAGCAGAGATAGCAGAAAGCAAGGTCCTACCATCAGCAGGCACAGTGGGTCGTGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS CCA 72 bp GGAGTGCTTAGGTTGGTGATTGTGTGCTGGACCCAGTaGGTGTCATTAAGCCAGTCAGCGCCACTGGTTTGC +
Preference number: 6 (lower is better)
Translates to: GVLRLVIVCWTQ*VSLSQSAPLVC
Trigger: GCAAACCAGTGGCGCTGACTGGCTTAATGACACCCACTGGGTCCAGCACACAATCACCAACCTAAGCACTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS CCA 72 bp GCGGCAATGGGTTCCATGGCAAACAGACCCCACTCATaGATACGGCTCCGGCCAAATCGGAGTTTCTTCTTC +
Preference number: 6 (lower is better)
Translates to: AAMGSMANRPHS*IRLRPNRSFFF
Trigger: GAAGAAGAAACTCCGATTTGGCCGGAGCCGTATCCATGAGTGGGGTCTGTTTGCCATGGAACCCATTGCCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS CAA 90 bp CCTTCACTGTCCAGAGTAAAGGATTTTCGGTGTTTGCCTTGGGTCTaGCCCCGTTCTTCATCTCGCTTCGGAGGCTTGGTCCCTGGACGT +
Preference number: 6 (lower is better)
Translates to: PSLSRVKDFRCLPWV*PRSSSRFGGLVPGR
Trigger: ACGTCCAGGGACCAAGCCTCCGAAGCGAGATGAAGAACGGGGCAAGACCCAAGGCAAACACCGAAAATCCTTTACTCTGGACAGTGAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS TCA 72 bp GCTGTGTGGGCAATGTCTCCTTTTCAGAGAGAGGCATaGCAGGGGAATCTACAAGCCCGTCTGTCTCAGGCT +
Preference number: 6 (lower is better)
Translates to: AVWAMSPFQREA*QGNLQARLSQA
Trigger: AGCCTGAGACAGACGGGCTTGTAGATTCCCCTGTCATGCCTCTCTCTGAAAAGGAGACATTGCCCACACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS CCA 72 bp TCCACTCCCTGTAGGTGCTACATCTTCAAAATTAGCTaGTGCAGGAGGAGGTGTACAGGGCCCATGACCTGC +
Preference number: 6 (lower is better)
Translates to: STPCRCYIFKIS*CRRRCTGPMTC
Trigger: GCAGGTCATGGGCCCTGTACACCTCCTCCTGCACCAGCTAATTTTGAAGATGTAGCACCTACAGGGAGTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS CCA 72 bp CTTCTCTCGCTCAGGATCATCTTCATCTTCCTCAGCTaGAGTAGAGGGCCTGGGCCTCTTTTCCTCACTTGC +
Preference number: 6 (lower is better)
Translates to: LLSLRIIFIFLS*SRGPGPLFLTC
Trigger: GCAAGTGAGGAAAAGAGGCCCAGGCCCTCTACTCCAGCTGAGGAAGATGAAGATGATCCTGAGCGAGAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS CAA 72 bp TGTGTACAGAGCATAGGGCAAGCCATAGGCTGCCTCTaGTGGAGGTGGAAAAGGGAGAAAGGCCTCGCCAAA +
Preference number: 6 (lower is better)
Translates to: CVQSIGQAIGCL*WRWKREKGLAK
Trigger: TTTGGCGAGGCCTTTCTCCCTTTTCCACCTCCACAAGAGGCAGCCTATGGCTTGCCCTATGCTCTGTACACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS CAA 90 bp TTGGGAGGACTGAGGGGTGAACTGGCCAAAGGAAGATGGAGTATCTaGTCGGCTGCTGGAGAAATTTGTATCTTGGGAGCAGGGAGTGCC +
Preference number: 6 (lower is better)
Translates to: LGGLRGELAKGRWSI*SAAGEICILGAGSA
Trigger: GGCACTCCCTGCTCCCAAGATACAAATTTCTCCAGCAGCCGACAAGATACTCCATCTTCCTTTGGCCAGTTCACCCCTCAGTCCTCCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS TCA 72 bp AGCAGCATTTCAATACGGGAATCCAAACTGCTGTGCTaGGCAAAGGGCACACTCTCGTTGGTGGTCTCTGGG +
Preference number: 6 (lower is better)
Translates to: SSISIRESKLLC*AKGTLSLVVSG
Trigger: CCCAGAGACCACCAACGAGAGTGTGCCCTTTGCTCAGCACAGCAGTTTGGATTCCCGTATTGAAATGCTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS TCA 72 bp CAGCGCCACTGGTTTGCTGCAGCAGCCGTTCATATGTaGGTCGCAAATAGCTCATGTCTTCCAAGTCAAGGC +
Preference number: 6 (lower is better)
Translates to: QRHWFAAAAVHM*VANSSCLPSQG
Trigger: GCCTTGACTTGGAAGACATGAGCTATTTGCGACTCACATATGAACGGCTGCTGCAGCAAACCAGTGGCGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS GCA 72 bp AGGAAGACGAGCTGCCACTCTCGGAGTCTGATGTGCTaGCATTTTCACCATCTGAATCCGCATACAGAGAGC +
Preference number: 6 (lower is better)
Translates to: RKTSCHSRSLMC*HFHHLNPHTES
Trigger: GCTCTCTGTATGCGGATTCAGATGGTGAAAATGGCAGCACATCAGACTCCGAGAGTGGCAGCTCGTCTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS CCA 72 bp CGATTAAGGTCTCGCTGCATAATGCTCTTCATCTCTTaGACAAGGGTAGCCAGCACACGACCCACTGTGCCT +
Preference number: 6 (lower is better)
Translates to: RLRSRCIMLFIS*TRVASTRPTVP
Trigger: AGGCACAGTGGGTCGTGTGCTGGCTACCCTTGTCCAAGAGATGAAGAGCATTATGCAGCGAGACCTTAATCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS CCA 72 bp GCCACTCTTGGCCCAGTCTACGAGGGACAGCATGCCTaGCTCTTTGAGCTTCATCTTTTCTTTGTCCTCTTC +
Preference number: 6 (lower is better)
Translates to: ATLGPVYEGQHA*LFELHLFFVLF
Trigger: GAAGAGGACAAAGAAAAGATGAAGCTCAAAGAGCCAGGCATGCTGTCCCTCGTAGACTGGGCCAAGAGTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS CCA 72 bp CATCCTCACCATCCGATGCCTCTGCTTCCTTCTTGGTaGCATCCACAGCTTCCTCCTGTTCTTCATCTTCCT +
Preference number: 6 (lower is better)
Translates to: HPHHPMPLLPSW*HPQLPPVLHLP
Trigger: AGGAAGATGAAGAACAGGAGGAAGCTGTGGATGCCACCAAGAAGGAAGCAGAGGCATCGGATGGTGAGGATG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS CCA 72 bp CCATTTTCACCATCTGAATCCGCATACAGAGAGCACTaGGAGGACGAGTCACTGTCCTCATCCTCACCATCC +
Preference number: 6 (lower is better)
Translates to: PFSPSESAYREH*EDESLSSSSPS
Trigger: GGATGGTGAGGATGAGGACAGTGACTCGTCCTCCCAGTGCTCTCTGTATGCGGATTCAGATGGTGAAAATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS CAA 72 bp AGGAAGATGGAGTATCTTGTCGGCTGCTGGAGAAATTaGTATCTTGGGAGCAGGGAGTGCCATTGCCAGGGG +
Preference number: 6 (lower is better)
Translates to: RKMEYLVGCWRN*YLGSRECHCQG
Trigger: CCCCTGGCAATGGCACTCCCTGCTCCCAAGATACAAATTTCTCCAGCAGCCGACAAGATACTCCATCTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS CAA 72 bp TCGATTAAGGTCTCGCTGCATAATGCTCTTCATCTCTaGGACAAGGGTAGCCAGCACACGACCCACTGTGCC +
Preference number: 6 (lower is better)
Translates to: SIKVSLHNALHL*DKGSQHTTHCA
Trigger: GGCACAGTGGGTCGTGTGCTGGCTACCCTTGTCCAAGAGATGAAGAGCATTATGCAGCGAGACCTTAATCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS CAA 72 bp TCTTGGGGCCGTCTTTTGCGCTTTGGAGTGCTTAGGTaGGTGATTGTGTGCTGGACCCAGTGGGTGTCATTA +
Preference number: 6 (lower is better)
Translates to: SWGRLLRFGVLR*VIVCWTQWVSL
Trigger: TAATGACACCCACTGGGTCCAGCACACAATCACCAACCTAAGCACTCCAAAGCGCAAAAGACGGCCCCAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS GCA 72 bp AAGAGGAAGACGAGCTGCCACTCTCGGAGTCTGATGTaGTGCCATTTTCACCATCTGAATCCGCATACAGAG +
Preference number: 6 (lower is better)
Translates to: KRKTSCHSRSLM*CHFHHLNPHTE
Trigger: CTCTGTATGCGGATTCAGATGGTGAAAATGGCAGCACATCAGACTCCGAGAGTGGCAGCTCGTCTTCCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS CCA 72 bp GGCCAACATATTCGATCACCATCTCATCAGCGGCAATaGGTTCCATGGCAAACAGACCCCACTCATGGATAC +
Preference number: 6 (lower is better)
Translates to: GQHIRSPSHQRQ*VPWQTDPTHGY
Trigger: GTATCCATGAGTGGGGTCTGTTTGCCATGGAACCCATTGCCGCTGATGAGATGGTGATCGAATATGTTGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS CAA 90 bp TCTACGAGGGACAGCATGCCTGGCTCTTTGAGCTTCATCTTTTCTTaGTCCTCTTCCTTGGCTTGCTGTTTGGCTGCATTCTGGAATGGC +
Preference number: 6 (lower is better)
Translates to: STRDSMPGSLSFIFS*SSSLACCLAAFWNG
Trigger: GCCATTCCAGAATGCAGCCAAACAGCAAGCCAAGGAAGAGGACAAAGAAAAGATGAAGCTCAAAGAGCCAGGCATGCTGTCCCTCGTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS CAA 72 bp CTGAGGGGTGAACTGGCCAAAGGAAGATGGAGTATCTaGTCGGCTGCTGGAGAAATTTGTATCTTGGGAGCA +
Preference number: 6 (lower is better)
Translates to: LRGELAKGRWSI*SAAGEICILGA
Trigger: TGCTCCCAAGATACAAATTTCTCCAGCAGCCGACAAGATACTCCATCTTCCTTTGGCCAGTTCACCCCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS CAA 90 bp GCCTGGCTCTTTGAGCTTCATCTTTTCTTTGTCCTCTTCCTTGGCTaGCTGTTTGGCTGCATTCTGGAATGGCTTGGCCTTCTCTTCCTT +
Preference number: 6 (lower is better)
Translates to: AWLFELHLFFVLFLG*LFGCILEWLGLLFL
Trigger: AAGGAAGAGAAGGCCAAGCCATTCCAGAATGCAGCCAAACAGCAAGCCAAGGAAGAGGACAAAGAAAAGATGAAGCTCAAAGAGCCAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS CAA 90 bp AGCATGCCTGGCTCTTTGAGCTTCATCTTTTCTTTGTCCTCTTCCTaGGCTTGCTGTTTGGCTGCATTCTGGAATGGCTTGGCCTTCTCT +
Preference number: 6 (lower is better)
Translates to: SMPGSLSFIFSLSSS*ACCLAAFWNGLAFS
Trigger: AGAGAAGGCCAAGCCATTCCAGAATGCAGCCAAACAGCAAGCCAAGGAAGAGGACAAAGAAAAGATGAAGCTCAAAGAGCCAGGCATGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS GCA 72 bp GCCACATTCTCGACCATCTTTCGATTAAGGTCTCGCTaGATAATGCTCTTCATCTCTTGGACAAGGGTAGCC +
Preference number: 6 (lower is better)
Translates to: ATFSTIFRLRSR*IMLFISWTRVA
Trigger: GGCTACCCTTGTCCAAGAGATGAAGAGCATTATGCAGCGAGACCTTAATCGAAAGATGGTCGAGAATGTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS TCA 72 bp CCCCAGTGGGCACAGTCTGAGGAGTGTAAGAGCCATTaGCAATCAATTCATAGTACTTCATTCGTTGTTGGC +
Preference number: 6 (lower is better)
Translates to: PQWAQSEECKSH*QSIHSTSFVVG
Trigger: GCCAACAACGAATGAAGTACTATGAATTGATTGTCAATGGCTCTTACACTCCTCAGACTGTGCCCACTGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
ENSMUST00000126761.8
ENSMUST00000144406.8
CDS CAA 72 bp TTCCGGCACATATCCTTCAGGAAGGTTTCCCTCACATaGTCATTGAGCCTCGCAAAAGTTACTTCCTTCAGT +
Preference number: 6 (lower is better)
Translates to: FRHISFRKVSLT*SLSLAKVTSFS
Trigger: ACTGAAGGAAGTAACTTTTGCGAGGCTCAATGACAATGTGAGGGAAACCTTCCTGAAGGATATGTGCCGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
ENSMUST00000126761.8
ENSMUST00000144406.8
CDS CAA 90 bp TCTCCATATTTCCGGCACATATCCTTCAGGAAGGTTTCCCTCACATaGTCATTGAGCCTCGCAAAAGTTACTTCCTTCAGTGGTATCTGT +
Preference number: 6 (lower is better)
Translates to: SPYFRHISFRKVSLT*SLSLAKVTSFSGIC
Trigger: ACAGATACCACTGAAGGAAGTAACTTTTGCGAGGCTCAATGACAATGTGAGGGAAACCTTCCTGAAGGATATGTGCCGGAAATATGGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
ENSMUST00000126761.8
ENSMUST00000144406.8
CDS CCA 72 bp CCAAGTCAAGGCCTGAGTTCCAAATATCATACAAGATaGTCATCTGCTCAAATTCACTTCTCGGCTCAAAGG +
Preference number: 6 (lower is better)
Translates to: PSQGLSSKYHTR*SSAQIHFSAQR
Trigger: CCTTTGAGCCGAGAAGTGAATTTGAGCAGATGACCATCTTGTATGATATTTGGAACTCAGGCCTTGACTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS CAA 72 bp TCCTCTTCCTCTGTATCAGAAGCCAAGAAAGAAAACTaGGAGCGTTGTTCCTTCAGCAGCATTTCAATACGG +
Preference number: 6 (lower is better)
Translates to: SSSSVSEAKKEN*ERCSFSSISIR
Trigger: CCGTATTGAAATGCTGCTGAAGGAACAACGCTCCAAGTTTTCTTTCTTGGCTTCTGATACAGAGGAAGAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
CDS CAA 90 bp TATTTCCGGCACATATCCTTCAGGAAGGTTTCCCTCACATTGTCATaGAGCCTCGCAAAAGTTACTTCCTTCAGTGGTATCTGTCCAATA +
Preference number: 6 (lower is better)
Translates to: YFRHISFRKVSLTLS*SLAKVTSFSGICPI
Trigger: TATTGGACAGATACCACTGAAGGAAGTAACTTTTGCGAGGCTCAATGACAATGTGAGGGAAACCTTCCTGAAGGATATGTGCCGGAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
ENSMUST00000126761.8
ENSMUST00000144406.8
CDS TCA 72 bp ACATATCCTTCAGGAAGGTTTCCCTCACATTGTCATTaGGCCTCGCAAAAGTTACTTCCTTCAGTGGTATCT +
Preference number: 6 (lower is better)
Translates to: TYPSGRFPSHCH*ASQKLLPSVVS
Trigger: AGATACCACTGAAGGAAGTAACTTTTGCGAGGCTCAATGACAATGTGAGGGAAACCTTCCTGAAGGATATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
ENSMUST00000126761.8
ENSMUST00000144406.8
CDS CCA 72 bp ATTGTCATTGAGCCTCGCAAAAGTTACTTCCTTCAGTaGTATCTGTCCAATATAGAACTCATCCAGCTTAAA +
Preference number: 6 (lower is better)
Translates to: IVIEPRKSYFLQ*YLSNIELIQLK
Trigger: TTTAAGCTGGATGAGTTCTATATTGGACAGATACCACTGAAGGAAGTAACTTTTGCGAGGCTCAATGACAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000047075.14
ENSMUST00000047157.13
ENSMUST00000126761.8
ENSMUST00000144406.8