RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SETBP1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000024548

Ensembl transcript IDs: ENSMUST00000025430.11

Found 549 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ACCTGGGATGAGGAGGATCAGGTGGCCATCTTTGAGCACCAGCTTTaGGTTCCTCCGTCTTCTGCAGCCTGCAAGGATCCCGCCACTGAA +
Preference number: 1 (lower is better)
Translates to: TWDEEDQVAIFEHQL*VPPSSAACKDPATE
Trigger: TTCAGTGGCGGGATCCTTGCAGGCTGCAGAAGACGGAGGAACGCAAAGCTGGTGCTCAAAGATGGCCACCTGATCCTCCTCATCCCAGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
3UTR GCA 90 bp TGGCCTCCCACTTCAGACGGCAGCCAAGTTTATACACCGTTCTACTaGCAGCCCTTAGTCACCTTTGCTAGGCTGCCAGTGACTGCTGAG +
Preference number: 1 (lower is better)
Translates to: WPPTSDGSQVYTPFY*QPLVTFARLPVTAE
Trigger: CTCAGCAGTCACTGGCAGCCTAGCAAAGGTGACTAAGGGCTGGCAGTAGAACGGTGTATAAACTTGGCTGCCGTCTGAAGTGGGAGGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
3UTR GCA 90 bp TTAGTCACCTTTGCTAGGCTGCCAGTGACTGCTGAGTCCTGGCCTTaGCAAGTCACAGAGCAACCTCTCCTGTTTTCCCTTCCTCTGACC +
Preference number: 1 (lower is better)
Translates to: LVTFARLPVTAESWP*QVTEQPLLFSLPLT
Trigger: GGTCAGAGGAAGGGAAAACAGGAGAGGTTGCTCTGTGACTTGGCAAGGCCAGGACTCAGCAGTCACTGGCAGCCTAGCAAAGGTGACTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
3UTR CCA 90 bp AAAACCACTTGGATGTGGAAATTCAACTGGCTTCGTGGAGGGGCCTaGGCGGCAAAGCAGAGGTTAAGGGTGTGGTTAGGGCACACAGAC +
Preference number: 1 (lower is better)
Translates to: KTTWMWKFNWLRGGA*AAKQRLRVWLGHTD
Trigger: GTCTGTGTGCCCTAACCACACCCTTAACCTCTGCTTTGCCGCCCAGGCCCCTCCACGAAGCCAGTTGAATTTCCACATCCAAGTGGTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
3UTR CCA 90 bp ATGGGCTCGCTTGCATCGTCAGCTGGTGTTCACCGTGACACTCTTTaGTCCTCTAGTCTTCCAGACAGTTCTCAGAGCTTGCATGCAAGG +
Preference number: 1 (lower is better)
Translates to: MGSLASSAGVHRDTL*SSSLPDSSQSLHAR
Trigger: CCTTGCATGCAAGCTCTGAGAACTGTCTGGAAGACTAGAGGACCAAAGAGTGTCACGGTGAACACCAGCTGACGATGCAAGCGAGCCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
3UTR CCA 90 bp TCTGGCTGTAAAAACCACTTGGATGTGGAAATTCAACTGGCTTCGTaGAGGGGCCTGGGCGGCAAAGCAGAGGTTAAGGGTGTGGTTAGG +
Preference number: 1 (lower is better)
Translates to: SGCKNHLDVEIQLAS*RGLGGKAEVKGVVR
Trigger: CCTAACCACACCCTTAACCTCTGCTTTGCCGCCCAGGCCCCTCCACGAAGCCAGTTGAATTTCCACATCCAAGTGGTTTTTACAGCCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
3UTR CCA 90 bp GTTCTCTTTCTGGCTGTAAAAACCACTTGGATGTGGAAATTCAACTaGCTTCGTGGAGGGGCCTGGGCGGCAAAGCAGAGGTTAAGGGTG +
Preference number: 1 (lower is better)
Translates to: VLFLAVKTTWMWKFN*LRGGAWAAKQRLRV
Trigger: CACCCTTAACCTCTGCTTTGCCGCCCAGGCCCCTCCACGAAGCCAGTTGAATTTCCACATCCAAGTGGTTTTTACAGCCAGAAAGAGAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
3UTR CCA 90 bp ATCAAGAGCTGGGTTCTCTTTCTGGCTGTAAAAACCACTTGGATGTaGAAATTCAACTGGCTTCGTGGAGGGGCCTGGGCGGCAAAGCAG +
Preference number: 1 (lower is better)
Translates to: IKSWVLFLAVKTTWM*KFNWLRGGAWAAKQ
Trigger: CTGCTTTGCCGCCCAGGCCCCTCCACGAAGCCAGTTGAATTTCCACATCCAAGTGGTTTTTACAGCCAGAAAGAGAACCCAGCTCTTGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
3UTR GCA 90 bp CTCAGTGGGGTGAACTCTCTTAGAAACACGAGGCAGAGGGAGCCTTaGTTTGTGGAAAGAAACGTGAAGAAACACCAAGAAGATGCTACG +
Preference number: 1 (lower is better)
Translates to: LSGVNSLRNTRQREP*FVERNVKKHQEDAT
Trigger: CGTAGCATCTTCTTGGTGTTTCTTCACGTTTCTTTCCACAAAGCAAGGCTCCCTCTGCCTCGTGTTTCTAAGAGAGTTCACCCCACTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
3UTR CCA 90 bp TATACCTGGGCAAGTGGGAGACAGATATCCAGGAAGTTCCTTCCTTaGTTGATATGTGCTTCTATGACTGTTCCCCCAAGTGACAGAGTC +
Preference number: 1 (lower is better)
Translates to: YTWASGRQISRKFLP*LICASMTVPPSDRV
Trigger: GACTCTGTCACTTGGGGGAACAGTCATAGAAGCACATATCAACCAAGGAAGGAACTTCCTGGATATCTGTCTCCCACTTGCCCAGGTATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
3UTR CCA 90 bp AGTTGGCAGCTCTTCGGTTTTCCCCTCTTTAGTGTTTATTATACCTaGGCAAGTGGGAGACAGATATCCAGGAAGTTCCTTCCTTGGTTG +
Preference number: 1 (lower is better)
Translates to: SWQLFGFPLFSVYYT*ASGRQISRKFLPWL
Trigger: CAACCAAGGAAGGAACTTCCTGGATATCTGTCTCCCACTTGCCCAGGTATAATAAACACTAAAGAGGGGAAAACCGAAGAGCTGCCAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
3UTR CCA 90 bp AAAGACACCAATCCAGGGCAGAACTACCCTTCCAGATTGACCAGTTaGCAGCTCTTCGGTTTTCCCCTCTTTAGTGTTTATTATACCTGG +
Preference number: 1 (lower is better)
Translates to: KDTNPGQNYPSRLTS*QLFGFPLFSVYYTW
Trigger: CCAGGTATAATAAACACTAAAGAGGGGAAAACCGAAGAGCTGCCAACTGGTCAATCTGGAAGGGTAGTTCTGCCCTGGATTGGTGTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
3UTR TCA 90 bp ATTTATAGATACAGCAATGTGCAGAACACACATTTGGACTGCCATTaGACATGGCCTCCCACTTCAGACGGCAGCCAAGTTTATACACCG +
Preference number: 1 (lower is better)
Translates to: IYRYSNVQNTHLDCH*TWPPTSDGSQVYTP
Trigger: CGGTGTATAAACTTGGCTGCCGTCTGAAGTGGGAGGCCATGTTCAATGGCAGTCCAAATGTGTGTTCTGCACATTGCTGTATCTATAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
3UTR CCA 90 bp TTGCTTATCATATTTATAGATACAGCAATGTGCAGAACACACATTTaGACTGCCATTGAACATGGCCTCCCACTTCAGACGGCAGCCAAG +
Preference number: 1 (lower is better)
Translates to: LLIIFIDTAMCRTHI*TAIEHGLPLQTAAK
Trigger: CTTGGCTGCCGTCTGAAGTGGGAGGCCATGTTCAATGGCAGTCCAAATGTGTGTTCTGCACATTGCTGTATCTATAAATATGATAAGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
3UTR TCA 90 bp AGTCTTCCAGACAGTTCTCAGAGCTTGCATGCAAGGATTTCCGTGTaGCTCACATTTAACTCAAAGATAACAATACACCCCAATTCACGC +
Preference number: 1 (lower is better)
Translates to: SLPDSSQSLHARISV*LTFNSKITIHPNSR
Trigger: GCGTGAATTGGGGTGTATTGTTATCTTTGAGTTAAATGTGAGTCACACGGAAATCCTTGCATGCAAGCTCTGAGAACTGTCTGGAAGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
3UTR GCA 90 bp AGACATGGCTTGGGAGTGACAGATTGGAAATGGCTGTTTAGATTTTaGTGTTCAAATTGTGTGAAATGCCATAGGTCAACCCAGGTCACA +
Preference number: 1 (lower is better)
Translates to: RHGLGVTDWKWLFRF*CSNCVKCHRSTQVT
Trigger: TGTGACCTGGGTTGACCTATGGCATTTCACACAATTTGAACAGCAAAATCTAAACAGCCATTTCCAATCTGTCACTCCCAAGCCATGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
3UTR TCA 90 bp GGAGAGCATGACAGTAAAGCATGCCAGATGTCGCTACGCCTCAAATaGCAGCAAGTCCATGTTCGTTTAAATGTACAAAAATGCTTTATG +
Preference number: 1 (lower is better)
Translates to: GEHDSKACQMSLRLK*QQVHVRLNVQKCFM
Trigger: CATAAAGCATTTTTGTACATTTAAACGAACATGGACTTGCTGTCATTTGAGGCGTAGCGACATCTGGCATGCTTTACTGTCATGCTCTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
3UTR GCA 90 bp GGAGCCTTGCTTTGTGGAAAGAAACGTGAAGAAACACCAAGAAGATaGTACGGTATATTACAGTTTGAGTTTCTAGGCACTGTGATGACA +
Preference number: 1 (lower is better)
Translates to: GALLCGKKREETPRR*YGILQFEFLGTVMT
Trigger: TGTCATCACAGTGCCTAGAAACTCAAACTGTAATATACCGTAGCATCTTCTTGGTGTTTCTTCACGTTTCTTTCCACAAAGCAAGGCTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
3UTR GCA 90 bp GAATTCTGTCACCACTTGCTTATCATATTTATAGATACAGCAATGTaGAGAACACACATTTGGACTGCCATTGAACATGGCCTCCCACTT +
Preference number: 1 (lower is better)
Translates to: EFCHHLLIIFIDTAM*RTHIWTAIEHGLPL
Trigger: AAGTGGGAGGCCATGTTCAATGGCAGTCCAAATGTGTGTTCTGCACATTGCTGTATCTATAAATATGATAAGCAAGTGGTGACAGAATTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
3UTR GCA 90 bp TATAAAAATAACCTGGCTGACACTTGGGTCGACATATCCATCGGCTaGTCTGAGTCACTTATTAAAAAGCTTCTAAACTGTACTGAGTTA +
Preference number: 1 (lower is better)
Translates to: YKNNLADTWVDISIG*SESLIKKLLNCTEL
Trigger: TAACTCAGTACAGTTTAGAAGCTTTTTAATAAGTGACTCAGAGCAGCCGATGGATATGTCGACCCAAGTGTCAGCCAGGTTATTTTTATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
3UTR-3UTR GCA 90 bp CAGAGGGAGCCTTGCTTTGTGGAAAGAAACGTGAAGAAACACCAAGAAGATGCTCTCCACCCTGCCCTCTaGCCATCCTGCCCACCCGCT +
Preference number: 2 (lower is better)
Translates to: QREPCFVERNVKKHQEDALHPAL*PSCPPA
Trigger: AGCGGGTGGGCAGGATGGGCAGAGGGCAGGGTGGAG...AGCATCTTCTTGGTGTTTCTTCACGTTTCTTTCCACAAAGCAAGGCTCCCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
3UTR-3UTR CCA 90 bp CAGAGGGAGCCTTGCTTTGTGGAAAGAAACGTGAAGAAACACCAAGAAGATGCTGCATCAGCCCCACCCTaGCTGCTGTGCTCCCCCACA +
Preference number: 2 (lower is better)
Translates to: QREPCFVERNVKKHQEDAASAPP*LLCSPT
Trigger: TGTGGGGGAGCACAGCAGCCAGGGTGGGGCTGATGC...AGCATCTTCTTGGTGTTTCTTCACGTTTCTTTCCACAAAGCAAGGCTCCCTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
3UTR-3UTR GCA 90 bp CTGACACTTGGGTCGACATATCCATCGGCTGCTCTGAGTCACTTATTAAAAAGCCCTAAAGCTCCACCCTaGCCTCTGCCCATCCTGCCC +
Preference number: 2 (lower is better)
Translates to: LTLGSTYPSAALSHLLKSPKAPP*PLPILP
Trigger: GGGCAGGATGGGCAGAGGGCAGGGTGGAGCTTTAGG...GCTTTTTAATAAGTGACTCAGAGCAGCCGATGGATATGTCGACCCAAGTGTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
3UTR CAA 90 bp ACTTTGAATCAAGAGCTGGGTTCTCTTTCTGGCTGTAAAAACCACTaGGATGTGGAAATTCAACTGGCTTCGTGGAGGGGCCTGGGCGGC +
Preference number: 2 (lower is better)
Translates to: TLNQELGSLSGCKNH*DVEIQLASWRGLGG
Trigger: GCCGCCCAGGCCCCTCCACGAAGCCAGTTGAATTTCCACATCCAAGTGGTTTTTACAGCCAGAAAGAGAACCCAGCTCTTGATTCAAAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
3UTR CAA 90 bp ACCTGGGCAAGTGGGAGACAGATATCCAGGAAGTTCCTTCCTTGGTaGATATGTGCTTCTATGACTGTTCCCCCAAGTGACAGAGTCCAA +
Preference number: 2 (lower is better)
Translates to: TWASGRQISRKFLPW*ICASMTVPPSDRVQ
Trigger: TTGGACTCTGTCACTTGGGGGAACAGTCATAGAAGCACATATCAACCAAGGAAGGAACTTCCTGGATATCTGTCTCCCACTTGCCCAGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
3UTR-3UTR TCA 90 bp CGCGTTAAGTGGCAGATCCAGTGTATCTCTACTGAATCTTTTTACTCTTTTGGAAGGGCACACCTGGGATaGGGAGGATCAGGTGGCCAT +
Preference number: 2 (lower is better)
Translates to: RVKWQIQCISTESFYSFGRAHLG*GGSGGH
Trigger: ATGGCCACCTGATCCTCCTCATCCCAGGTGTGCCCT...TCCAAAAGAGTAAAAAGATTCAGTAGAGATACACTGGATCTGCCACTTAACGCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
3UTR-3UTR TCA 90 bp CCATTGAACATGGCCTCCCACTTCAGACGGCAGCCAAGTTTATACACCGTTCTAAGTCCATTTCGACAGTaGAGATCAGGATGGCTCTGT +
Preference number: 2 (lower is better)
Translates to: PLNMASHFRRQPSLYTVLSPFRQ*RSGWLC
Trigger: ACAGAGCCATCCTGATCTTCACTGTCGAAATGGACT...TAGAACGGTGTATAAACTTGGCTGCCGTCTGAAGTGGGAGGCCATGTTCAATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
3UTR-3UTR CCA 90 bp CTTTTGAGGCATTTCAGCTCCCGCCACTCCCCCTCTATGCTACAGTTGGCATTTAAAACCACTTGGATGTaGAAATTCAACTGGCTTCGT +
Preference number: 2 (lower is better)
Translates to: LLRHFSSRHSPSMLQLAFKTTWM*KFNWLR
Trigger: ACGAAGCCAGTTGAATTTCCACATCCAAGTGGTTTT...AAATGCCAACTGTAGCATAGAGGGGGAGTGGCGGGAGCTGAAATGCCTCAAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
3UTR CAA 90 bp TGCATCCCCAGAAGGCAGTGTTGTGTGGATAAGAACCTCCATACTTaGAATCAAGAGCTGGGTTCTCTTTCTGGCTGTAAAAACCACTTG +
Preference number: 2 (lower is better)
Translates to: CIPRRQCCVDKNLHT*NQELGSLSGCKNHL
Trigger: CAAGTGGTTTTTACAGCCAGAAAGAGAACCCAGCTCTTGATTCAAAGTATGGAGGTTCTTATCCACACAACACTGCCTTCTGGGGATGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
3UTR-3UTR GCA 90 bp TCTGCTTATGATACATCATCCTCTACTAGAATTCTGTCACCACTTGCTTATCATCCGTCTTCTGCAGCCTaGAAGGATCCCGCCACTGAA +
Preference number: 2 (lower is better)
Translates to: SAYDTSSSTRILSPLAYHPSSAA*KDPATE
Trigger: TTCAGTGGCGGGATCCTTGCAGGCTGCAGAAGACGG...ATGATAAGCAAGTGGTGACAGAATTCTAGTAGAGGATGATGTATCATAAGCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
3UTR-3UTR CCA 90 bp CCATTGAACATGGCCTCCCACTTCAGACGGCAGCCAAGTTTATACACCGTTCTAATGTTTCACAATGATTaGGATTCAAAGCCGGTTCCT +
Preference number: 2 (lower is better)
Translates to: PLNMASHFRRQPSLYTVLMFHND*DSKPVP
Trigger: AGGAACCGGCTTTGAATCCCAATCATTGTGAAACAT...TAGAACGGTGTATAAACTTGGCTGCCGTCTGAAGTGGGAGGCCATGTTCAATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
3UTR-3UTR TCA 90 bp GAGATCCTGTGTTCTGATGTGATAATGCAGTTTCTTAGCTGGTCTCAACTTTCTAGGCATTTGATGTCTTaGAGAAGGGGAGGCGTAAGG +
Preference number: 2 (lower is better)
Translates to: EILCSDVIMQFLSWSQLSRHLMS*RRGGVR
Trigger: CCTTACGCCTCCCCTTCTTCAAGACATCAAATGCCT...AGAAAGTTGAGACCAGCTAAGAAACTGCATTATCACATCAGAACACAGGATCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
3UTR-3UTR TCA 90 bp CAGAGGGAGCCTTGCTTTGTGGAAAGAAACGTGAAGAAACACCAAGAAGATGCTACCCAGGTCACAAACTaGGTATCTAGGATAAAAGCT +
Preference number: 2 (lower is better)
Translates to: QREPCFVERNVKKHQEDATQVTN*VSRIKA
Trigger: AGCTTTTATCCTAGATACTCAGTTTGTGACCTGGGT...AGCATCTTCTTGGTGTTTCTTCACGTTTCTTTCCACAAAGCAAGGCTCCCTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
3UTR-3UTR CCA 90 bp CAATCAAATGGTGGATGTCTCTTGAGGTTTAATAAGCACCAGATTTCTCTCTTCATGAGGAGGATCAGGTaGCCATCTTTGAGCACCAGC +
Preference number: 2 (lower is better)
Translates to: QSNGGCLLRFNKHQISLFMRRIR*PSLSTS
Trigger: GCTGGTGCTCAAAGATGGCCACCTGATCCTCCTCAT...GAAGAGAGAAATCTGGTGCTTATTAAACCTCAAGAGACATCCACCATTTGATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
3UTR-3UTR CCA 90 bp CTAAACTGTACTGAGTTATGTTTCACAATGATTGGGATTCAAAGCCGGTTCCTTAATCAAGGGCACACCTaGGATGAGGAGGATCAGGTG +
Preference number: 2 (lower is better)
Translates to: LNCTELCFTMIGIQSRFLNQGHT*DEEDQV
Trigger: CACCTGATCCTCCTCATCCCAGGTGTGCCCTTGATT...AAGGAACCGGCTTTGAATCCCAATCATTGTGAAACATAACTCAGTACAGTTTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
3UTR-3UTR CCA 90 bp CCATTGAACATGGCCTCCCACTTCAGACGGCAGCCAAGTTTATACACCGTTCTATTGGGAGTGACAGATTaGAAATGGCTGTTTAGATTT +
Preference number: 2 (lower is better)
Translates to: PLNMASHFRRQPSLYTVLLGVTD*KWLFRF
Trigger: AAATCTAAACAGCCATTTCCAATCTGTCACTCCCAA...TAGAACGGTGTATAAACTTGGCTGCCGTCTGAAGTGGGAGGCCATGTTCAATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
3UTR-3UTR TCA 90 bp GAGTTACTCAGACATGGCTTGGGAGTGACAGATTGGAAATGGCTGTTTAGATTTTCACAAGTTTCCATCTaGGCAACTGTGCTGTTAACG +
Preference number: 2 (lower is better)
Translates to: ELLRHGLGVTDWKWLFRFSQVSI*ATVLLT
Trigger: CGTTAACAGCACAGTTGCTCAGATGGAAACTTGTGA...AAATCTAAACAGCCATTTCCAATCTGTCACTCCCAAGCCATGTCTGAGTAACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
3UTR-3UTR CCA 90 bp CGCGTTAAGTGGCAGATCCAGTGTATCTCTACTGAATCTTTTTACTCTTTTGGAGGAGTTACTCAGACATaGCTTGGGAGTGACAGATTG +
Preference number: 2 (lower is better)
Translates to: RVKWQIQCISTESFYSFGGVTQT*LGSDRL
Trigger: CAATCTGTCACTCCCAAGCCATGTCTGAGTAACTCC...TCCAAAAGAGTAAAAAGATTCAGTAGAGATACACTGGATCTGCCACTTAACGCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
3UTR-3UTR TCA 90 bp AGACAGATATCCAGGAAGTTCCTTCCTTGGTTGATATGTGCTTCTATGACTGTTTGTGTATCACAAAGTTaGAGGCAGCAAGTTAACGGG +
Preference number: 2 (lower is better)
Translates to: RQISRKFLPWLICASMTVCVSQS*RQQVNG
Trigger: CCCGTTAACTTGCTGCCTTCAACTTTGTGATACACA...AACAGTCATAGAAGCACATATCAACCAAGGAAGGAACTTCCTGGATATCTGTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
3UTR-3UTR TCA 90 bp TGCTACGGTATATTACAGTTTGAGTTTCTAGGCACTGTGATGACATTATCTGTATTGTCCAAGGTGGCTTaGTGCAATTGGAGTGGTGGT +
Preference number: 2 (lower is better)
Translates to: CYGILQFEFLGTVMTLSVLSKVA*CNWSGG
Trigger: ACCACCACTCCAATTGCATCAAGCCACCTTGGACAA...TACAGATAATGTCATCACAGTGCCTAGAAACTCAAACTGTAATATACCGTAGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
3UTR-3UTR CCA 90 bp CTAAACTGTACTGAGTTATGTTTCACAATGATTGGGATTCAAAGCCGGTTCCTTCCAATTATGCGGAAGTaGCTTACAAACAAGCCAGCT +
Preference number: 2 (lower is better)
Translates to: LNCTELCFTMIGIQSRFLPIMRK*LTNKPA
Trigger: AGCTGGCTTGTTTGTAAGCCACTTCCGCATAATTGG...AAGGAACCGGCTTTGAATCCCAATCATTGTGAAACATAACTCAGTACAGTTTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
3UTR-3UTR CCA 90 bp AGACAGATATCCAGGAAGTTCCTTCCTTGGTTGATATGTGCTTCTATGACTGTTATACTTTGTCCAAGGTaGCTTGATGCAATTGGAGTG +
Preference number: 2 (lower is better)
Translates to: RQISRKFLPWLICASMTVILCPR*LDAIGV
Trigger: CACTCCAATTGCATCAAGCCACCTTGGACAAAGTAT...AACAGTCATAGAAGCACATATCAACCAAGGAAGGAACTTCCTGGATATCTGTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
3UTR-3UTR CCA 90 bp GAGATCCTGTGTTCTGATGTGATAATGCAGTTTCTTAGCTGGTCTCAACTTTCTACTTGGGCTGTGGAATaGATGATAGACGGAATATCT +
Preference number: 2 (lower is better)
Translates to: EILCSDVIMQFLSWSQLSTWAVE*MIDGIS
Trigger: AGATATTCCGTCTATCATCCATTCCACAGCCCAAGT...AGAAAGTTGAGACCAGCTAAGAAACTGCATTATCACATCAGAACACAGGATCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
3UTR CAA 90 bp ATGCGGAAGTGGCTTACAAACAAGCCAGCTGGTAAATTTTCAGCTTaGCTTCCCCTTGGAATGTTTGCTAATGGTGTTTCCTATTTATTT +
Preference number: 2 (lower is better)
Translates to: MRKWLTNKPAGKFSA*LPLGMFANGVSYLF
Trigger: AAATAAATAGGAAACACCATTAGCAAACATTCCAAGGGGAAGCAAAGCTGAAAATTTACCAGCTGGCTTGTTTGTAAGCCACTTCCGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
3UTR-3UTR TCA 90 bp AGGTTTAGATTCTATAAGCCTTCTGTAGGAAGGTTTAGATTCTATAAGCCTTCTATACCTTCCTCCCTGTaGCTTTGGAGTTACTCAGAC +
Preference number: 2 (lower is better)
Translates to: RFRFYKPSVGRFRFYKPSIPSSL*LWSYSD
Trigger: GTCTGAGTAACTCCAAAGTCACAGGGAGGAAGGTAT...AGAAGGCTTATAGAATCTAAACCTTCCTACAGAAGGCTTATAGAATCTAAACCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
3UTR-3UTR TCA 90 bp AGACAGATATCCAGGAAGTTCCTTCCTTGGTTGATATGTGCTTCTATGACTGTTCGGTATATTACAGTTTaGGTTTCTAGGCACTGTGAT +
Preference number: 2 (lower is better)
Translates to: RQISRKFLPWLICASMTVRYITV*VSRHCD
Trigger: ATCACAGTGCCTAGAAACTCAAACTGTAATATACCG...AACAGTCATAGAAGCACATATCAACCAAGGAAGGAACTTCCTGGATATCTGTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
3UTR-3UTR CCA 90 bp CAATCAAATGGTGGATGTCTCTTGAGGTTTAATAAGCACCAGATTTCTCTCTTCAAGGCAACCACAATTTaGATACTTTGTCCAAGGTGG +
Preference number: 2 (lower is better)
Translates to: QSNGGCLLRFNKHQISLFKATTI*ILCPRW
Trigger: CCACCTTGGACAAAGTATCCAAATTGTGGTTGCCTT...GAAGAGAGAAATCTGGTGCTTATTAAACCTCAAGAGACATCCACCATTTGATTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
3UTR-3UTR CCA 90 bp TGCTACGGTATATTACAGTTTGAGTTTCTAGGCACTGTGATGACATTATCTGTATGCAGAACACACATTTaGACTGCCATTGAACATGGC +
Preference number: 2 (lower is better)
Translates to: CYGILQFEFLGTVMTLSVCRTHI*TAIEHG
Trigger: GCCATGTTCAATGGCAGTCCAAATGTGTGTTCTGCA...TACAGATAATGTCATCACAGTGCCTAGAAACTCAAACTGTAATATACCGTAGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
3UTR CAA 90 bp AGTGTATTAAGGCAACCACAATTTGGATACTTTGTCCAAGGTGGCTaGATGCAATTGGAGTGGTGGTACCCTTTGAATACTTTATTCTAT +
Preference number: 2 (lower is better)
Translates to: SVLRQPQFGYFVQGG*MQLEWWYPLNTLFY
Trigger: ATAGAATAAAGTATTCAAAGGGTACCACCACTCCAATTGCATCAAGCCACCTTGGACAAAGTATCCAAATTGTGGTTGCCTTAATACACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
3UTR-3UTR TCA 90 bp CAATCAAATGGTGGATGTCTCTTGAGGTTTAATAAGCACCAGATTTCTCTCTTCGTTAACGGGAGTACATaGAAACACAACACAAAGGAA +
Preference number: 2 (lower is better)
Translates to: QSNGGCLLRFNKHQISLFVNGST*KHNTKE
Trigger: TTCCTTTGTGTTGTGTTTTCATGTACTCCCGTTAAC...GAAGAGAGAAATCTGGTGCTTATTAAACCTCAAGAGACATCCACCATTTGATTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
3UTR-3UTR TCA 90 bp CTAAACTGTACTGAGTTATGTTTCACAATGATTGGGATTCAAAGCCGGTTCCTTTGGACTTTACAAACGTaGGTCAAGTTCACCTTGTTT +
Preference number: 2 (lower is better)
Translates to: LNCTELCFTMIGIQSRFLWTLQT*VKFTLF
Trigger: AAACAAGGTGAACTTGACTCACGTTTGTAAAGTCCA...AAGGAACCGGCTTTGAATCCCAATCATTGTGAAACATAACTCAGTACAGTTTAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
3UTR-3UTR GCA 90 bp GAGTTACTCAGACATGGCTTGGGAGTGACAGATTGGAAATGGCTGTTTAGATTTCCTATGACAGCTCTTTaGATGAAAATAATCAGATAC +
Preference number: 2 (lower is better)
Translates to: ELLRHGLGVTDWKWLFRFPMTAL*MKIIRY
Trigger: GTATCTGATTATTTTCATGCAAAGAGCTGTCATAGG...AAATCTAAACAGCCATTTCCAATCTGTCACTCCCAAGCCATGTCTGAGTAACTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
3UTR-3UTR CCA 90 bp GAGTTACTCAGACATGGCTTGGGAGTGACAGATTGGAAATGGCTGTTTAGATTTGATTTTGATTTTTGGTaGCTTATCCAGTTATTCCAC +
Preference number: 2 (lower is better)
Translates to: ELLRHGLGVTDWKWLFRFDFDFW*LIQLFH
Trigger: GTGGAATAACTGGATAAGCCACCAAAAATCAAAATC...AAATCTAAACAGCCATTTCCAATCTGTCACTCCCAAGCCATGTCTGAGTAACTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
3UTR-3UTR CCA 90 bp TGCTACGGTATATTACAGTTTGAGTTTCTAGGCACTGTGATGACATTATCTGTATCTTTCTGGTGGGTGTaGGATTTTGATTTTTGGTGG +
Preference number: 2 (lower is better)
Translates to: CYGILQFEFLGTVMTLSVSFWWV*DFDFWW
Trigger: CCACCAAAAATCAAAATCCCACACCCACCAGAAAGA...TACAGATAATGTCATCACAGTGCCTAGAAACTCAAACTGTAATATACCGTAGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
3UTR-3UTR CCA 90 bp CGCGTTAAGTGGCAGATCCAGTGTATCTCTACTGAATCTTTTTACTCTTTTGGAGTGACAGATTGGAAATaGCTGTTTAGATTTTGCTGT +
Preference number: 2 (lower is better)
Translates to: RVKWQIQCISTESFYSFGVTDWK*LFRFCC
Trigger: ACAGCAAAATCTAAACAGCCATTTCCAATCTGTCAC...TCCAAAAGAGTAAAAAGATTCAGTAGAGATACACTGGATCTGCCACTTAACGCG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
3UTR-3UTR TCA 90 bp TGCTACGGTATATTACAGTTTGAGTTTCTAGGCACTGTGATGACATTATCTGTAAGTTATGTTTCACAATaGTTGGGATTCAAAGCCGGT +
Preference number: 2 (lower is better)
Translates to: CYGILQFEFLGTVMTLSVSYVSQ*LGFKAG
Trigger: ACCGGCTTTGAATCCCAATCATTGTGAAACATAACT...TACAGATAATGTCATCACAGTGCCTAGAAACTCAAACTGTAATATACCGTAGCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
3UTR CAA 90 bp TTAAGTGGCAGATCCAGTGTATCTCTACTGAATCTTTTTACTCTTTaGGAAATTCTAACCCAAACGTCTTTTGAGCTAATCACTGATCAC +
Preference number: 2 (lower is better)
Translates to: LSGRSSVSLLNLFTL*EILTQTSFELITDH
Trigger: GTGATCAGTGATTAGCTCAAAAGACGTTTGGGTTAGAATTTCCAAAAGAGTAAAAAGATTCAGTAGAGATACACTGGATCTGCCACTTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
3UTR-3UTR GCA 90 bp TATGATCTGCTTATGATACATCATCCTCTACTAGAATTCTGTCACCACTTGCTTAAGAGAAATAAAAGATaGAGCAGTGAGGAAGTCACT +
Preference number: 2 (lower is better)
Translates to: YDLLMIHHPLLEFCHHLLKRNKR*SSEEVT
Trigger: AGTGACTTCCTCACTGCTGCATCTTTTATTTCTCTT...AAGCAAGTGGTGACAGAATTCTAGTAGAGGATGATGTATCATAAGCAGATCATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
3UTR CAA 90 bp GATCTGCTTATGATACATCATCCTCTACTAGAATTCTGTCACCACTaGCTTATCATATTTATAGATACAGCAATGTGCAGAACACACATT +
Preference number: 2 (lower is better)
Translates to: DLLMIHHPLLEFCHH*LIIFIDTAMCRTHI
Trigger: AATGTGTGTTCTGCACATTGCTGTATCTATAAATATGATAAGCAAGTGGTGACAGAATTCTAGTAGAGGATGATGTATCATAAGCAGATC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
3UTR CCA 72 bp GGAGGGGCCTGGGCGGCAAAGCAGAGGTTAAGGGTGTaGTTAGGGCACACAGACATAGTTGTGGCGATCAGG +
Preference number: 3 (lower is better)
Translates to: GGAWAAKQRLRV*LGHTDIVVAIR
Trigger: CCTGATCGCCACAACTATGTCTGTGTGCCCTAACCACACCCTTAACCTCTGCTTTGCCGCCCAGGCCCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
3UTR GCA 72 bp GAGGAGGATCAGGTGGCCATCTTTGAGCACCAGCTTTaGGTTCCTCCGTCTTCTGCAGCCTGCAAGGATCCC +
Preference number: 3 (lower is better)
Translates to: EEDQVAIFEHQL*VPPSSAACKDP
Trigger: GGGATCCTTGCAGGCTGCAGAAGACGGAGGAACGCAAAGCTGGTGCTCAAAGATGGCCACCTGATCCTCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
3UTR TCA 72 bp CAGAGTCCAACAGGGAAGGCAGGCTCCTCAGTGGGGTaGACTCTCTTAGAAACACGAGGCAGAGGGAGCCTT +
Preference number: 3 (lower is better)
Translates to: QSPTGKAGSSVG*TLLETRGRGSL
Trigger: AAGGCTCCCTCTGCCTCGTGTTTCTAAGAGAGTTCACCCCACTGAGGAGCCTGCCTTCCCTGTTGGACTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
3UTR GCA 72 bp TTTGCTAGGCTGCCAGTGACTGCTGAGTCCTGGCCTTaGCAAGTCACAGAGCAACCTCTCCTGTTTTCCCTT +
Preference number: 3 (lower is better)
Translates to: FARLPVTAESWP*QVTEQPLLFSL
Trigger: AAGGGAAAACAGGAGAGGTTGCTCTGTGACTTGGCAAGGCCAGGACTCAGCAGTCACTGGCAGCCTAGCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
3UTR GCA 72 bp ACTTCAGACGGCAGCCAAGTTTATACACCGTTCTACTaGCAGCCCTTAGTCACCTTTGCTAGGCTGCCAGTG +
Preference number: 3 (lower is better)
Translates to: TSDGSQVYTPFY*QPLVTFARLPV
Trigger: CACTGGCAGCCTAGCAAAGGTGACTAAGGGCTGGCAGTAGAACGGTGTATAAACTTGGCTGCCGTCTGAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
3UTR CCA 72 bp AAAAACCACTTGGATGTGGAAATTCAACTGGCTTCGTaGAGGGGCCTGGGCGGCAAAGCAGAGGTTAAGGGT +
Preference number: 3 (lower is better)
Translates to: KNHLDVEIQLAS*RGLGGKAEVKG
Trigger: ACCCTTAACCTCTGCTTTGCCGCCCAGGCCCCTCCACGAAGCCAGTTGAATTTCCACATCCAAGTGGTTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
3UTR-3UTR CAA 90 bp CTTTTGAGGCATTTCAGCTCCCGCCACTCCCCCTCTATGCTACAGTTGGCATTTACATTTGGACTGCCATaGAACATGGCCTCCCACTTC +
Preference number: 3 (lower is better)
Translates to: LLRHFSSRHSPSMLQLAFTFGLP*NMASHF
Trigger: GAAGTGGGAGGCCATGTTCAATGGCAGTCCAAATGT...AAATGCCAACTGTAGCATAGAGGGGGAGTGGCGGGAGCTGAAATGCCTCAAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
3UTR CCA 72 bp CTTGCATCGTCAGCTGGTGTTCACCGTGACACTCTTTaGTCCTCTAGTCTTCCAGACAGTTCTCAGAGCTTG +
Preference number: 3 (lower is better)
Translates to: LASSAGVHRDTL*SSSLPDSSQSL
Trigger: CAAGCTCTGAGAACTGTCTGGAAGACTAGAGGACCAAAGAGTGTCACGGTGAACACCAGCTGACGATGCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
3UTR TCA 72 bp TACAGCAATGTGCAGAACACACATTTGGACTGCCATTaGACATGGCCTCCCACTTCAGACGGCAGCCAAGTT +
Preference number: 3 (lower is better)
Translates to: YSNVQNTHLDCH*TWPPTSDGSQV
Trigger: AACTTGGCTGCCGTCTGAAGTGGGAGGCCATGTTCAATGGCAGTCCAAATGTGTGTTCTGCACATTGCTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
3UTR TCA 72 bp AAGACACCAATCCAGGGCAGAACTACCCTTCCAGATTaGCCAGTTGGCAGCTCTTCGGTTTTCCCCTCTTTA +
Preference number: 3 (lower is better)
Translates to: KTPIQGRTTLPD*PVGSSSVFPSL
Trigger: TAAAGAGGGGAAAACCGAAGAGCTGCCAACTGGTCAATCTGGAAGGGTAGTTCTGCCCTGGATTGGTGTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
3UTR-3UTR CAA 90 bp CCATTGAACATGGCCTCCCACTTCAGACGGCAGCCAAGTTTATACACCGTTCTAAAGAAGGCTTATAGATaGGGTTGGGAGACTCTACAC +
Preference number: 3 (lower is better)
Translates to: PLNMASHFRRQPSLYTVLKKAYR*GWETLH
Trigger: GTGTAGAGTCTCCCAACCCAATCTATAAGCCTTCTT...TAGAACGGTGTATAAACTTGGCTGCCGTCTGAAGTGGGAGGCCATGTTCAATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
3UTR-3UTR CAA 90 bp CCATTGAACATGGCCTCCCACTTCAGACGGCAGCCAAGTTTATACACCGTTCTAGGCTGTAAAAACCACTaGGATGTGGAAATTCAACTG +
Preference number: 3 (lower is better)
Translates to: PLNMASHFRRQPSLYTVLGCKNH*DVEIQL
Trigger: CAGTTGAATTTCCACATCCAAGTGGTTTTTACAGCC...TAGAACGGTGTATAAACTTGGCTGCCGTCTGAAGTGGGAGGCCATGTTCAATGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
3UTR CCA 72 bp AATCCAGGGCAGAACTACCCTTCCAGATTGACCAGTTaGCAGCTCTTCGGTTTTCCCCTCTTTAGTGTTTAT +
Preference number: 3 (lower is better)
Translates to: NPGQNYPSRLTS*QLFGFPLFSVY
Trigger: ATAAACACTAAAGAGGGGAAAACCGAAGAGCTGCCAACTGGTCAATCTGGAAGGGTAGTTCTGCCCTGGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
3UTR-3UTR CAA 90 bp CAGAGGGAGCCTTGCTTTGTGGAAAGAAACGTGAAGAAACACCAAGAAGATGCTTTTGTCACACACAGTTaGCATCCATGCAGACTGATA +
Preference number: 3 (lower is better)
Translates to: QREPCFVERNVKKHQEDAFVTHS*HPCRLI
Trigger: TATCAGTCTGCATGGATGCAAACTGTGTGTGACAAA...AGCATCTTCTTGGTGTTTCTTCACGTTTCTTTCCACAAAGCAAGGCTCCCTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
3UTR TCA 72 bp ATGTTTCACAATGATTGGGATTCAAAGCCGGTTCCTTaGGGCAGGATTCGAAGAGTGGACTTTACAAACGTG +
Preference number: 3 (lower is better)
Translates to: MFHNDWDSKPVP*GRIRRVDFTNV
Trigger: CACGTTTGTAAAGTCCACTCTTCGAATCCTGCCTCAAGGAACCGGCTTTGAATCCCAATCATTGTGAAACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
3UTR GCA 72 bp AACCTGGCTGACACTTGGGTCGACATATCCATCGGCTaGTCTGAGTCACTTATTAAAAAGCTTCTAAACTGT +
Preference number: 3 (lower is better)
Translates to: NLADTWVDISIG*SESLIKKLLNC
Trigger: ACAGTTTAGAAGCTTTTTAATAAGTGACTCAGAGCAGCCGATGGATATGTCGACCCAAGTGTCAGCCAGGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
3UTR GCA 72 bp TTTGGTCCTCTAGTCTTCCAGACAGTTCTCAGAGCTTaGATGCAAGGATTTCCGTGTGACTCACATTTAACT +
Preference number: 3 (lower is better)
Translates to: FGPLVFQTVLRA*MQGFPCDSHLT
Trigger: AGTTAAATGTGAGTCACACGGAAATCCTTGCATGCAAGCTCTGAGAACTGTCTGGAAGACTAGAGGACCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
3UTR TCA 72 bp GACAGTTCTCAGAGCTTGCATGCAAGGATTTCCGTGTaGCTCACATTTAACTCAAAGATAACAATACACCCC +
Preference number: 3 (lower is better)
Translates to: DSSQSLHARISV*LTFNSKITIHP
Trigger: GGGGTGTATTGTTATCTTTGAGTTAAATGTGAGTCACACGGAAATCCTTGCATGCAAGCTCTGAGAACTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
3UTR TCA 72 bp GAAGGCAGTGTTGTGTGGATAAGAACCTCCATACTTTaGATCAAGAGCTGGGTTCTCTTTCTGGCTGTAAAA +
Preference number: 3 (lower is better)
Translates to: EGSVVWIRTSIL*IKSWVLFLAVK
Trigger: TTTTACAGCCAGAAAGAGAACCCAGCTCTTGATTCAAAGTATGGAGGTTCTTATCCACACAACACTGCCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
3UTR CCA 72 bp ATTAAGGCAACCACAATTTGGATACTTTGTCCAAGGTaGCTTGATGCAATTGGAGTGGTGGTACCCTTTGAA +
Preference number: 3 (lower is better)
Translates to: IKATTIWILCPR*LDAIGVVVPFE
Trigger: TTCAAAGGGTACCACCACTCCAATTGCATCAAGCCACCTTGGACAAAGTATCCAAATTGTGGTTGCCTTAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
3UTR CCA 72 bp ATATTTATAGATACAGCAATGTGCAGAACACACATTTaGACTGCCATTGAACATGGCCTCCCACTTCAGACG +
Preference number: 3 (lower is better)
Translates to: IFIDTAMCRTHI*TAIEHGLPLQT
Trigger: CGTCTGAAGTGGGAGGCCATGTTCAATGGCAGTCCAAATGTGTGTTCTGCACATTGCTGTATCTATAAATAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
3UTR-3UTR CAA 90 bp TCTGCTTATGATACATCATCCTCTACTAGAATTCTGTCACCACTTGCTTATCATTTCAAAGCCGGTTCCTaGAGGCAGGATTCGAAGAGT +
Preference number: 3 (lower is better)
Translates to: SAYDTSSSTRILSPLAYHFKAGS*RQDSKS
Trigger: ACTCTTCGAATCCTGCCTCAAGGAACCGGCTTTGAA...ATGATAAGCAAGTGGTGACAGAATTCTAGTAGAGGATGATGTATCATAAGCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
3UTR-3UTR CAA 90 bp AGGTTTAGATTCTATAAGCCTTCTGTAGGAAGGTTTAGATTCTATAAGCCTTCTGGTGGCTTGATGCAATaGGAGTGGTGGTACCCTTTG +
Preference number: 3 (lower is better)
Translates to: RFRFYKPSVGRFRFYKPSGGLMQ*EWWYPL
Trigger: CAAAGGGTACCACCACTCCAATTGCATCAAGCCACC...AGAAGGCTTATAGAATCTAAACCTTCCTACAGAAGGCTTATAGAATCTAAACCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
3UTR-3UTR CAA 90 bp TATGATCTGCTTATGATACATCATCCTCTACTAGAATTCTGTCACCACTTGCTTTTTGTCCAAGGTGGCTaGATGCAATTGGAGTGGTGG +
Preference number: 3 (lower is better)
Translates to: YDLLMIHHPLLEFCHHLLFVQGG*MQLEWW
Trigger: CCACCACTCCAATTGCATCAAGCCACCTTGGACAAA...AAGCAAGTGGTGACAGAATTCTAGTAGAGGATGATGTATCATAAGCAGATCATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
3UTR-3UTR CAA 90 bp AGACAGATATCCAGGAAGTTCCTTCCTTGGTTGATATGTGCTTCTATGACTGTTTGTAAGCGCTGGCATTaGGACCATTGTGATACGATA +
Preference number: 3 (lower is better)
Translates to: RQISRKFLPWLICASMTVCKRWH*DHCDTI
Trigger: TATCGTATCACAATGGTCCAAATGCCAGCGCTTACA...AACAGTCATAGAAGCACATATCAACCAAGGAAGGAACTTCCTGGATATCTGTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
3UTR TCA 72 bp CTTGAGGCAGGATTCGAAGAGTGGACTTTACAAACGTaGGTCAAGTTCACCTTGTTTAGATGTGTATCACAA +
Preference number: 3 (lower is better)
Translates to: LEAGFEEWTLQT*VKFTLFRCVSQ
Trigger: TTGTGATACACATCTAAACAAGGTGAACTTGACTCACGTTTGTAAAGTCCACTCTTCGAATCCTGCCTCAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
3UTR TCA 72 bp GGAAATGGCTGTTTAGATTTTGCTGTTCAAATTGTGTaGAATGCCATAGGTCAACCCAGGTCACAAACTGAG +
Preference number: 3 (lower is better)
Translates to: GNGCLDFAVQIV*NAIGQPRSQTE
Trigger: CTCAGTTTGTGACCTGGGTTGACCTATGGCATTTCACACAATTTGAACAGCAAAATCTAAACAGCCATTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
3UTR TCA 72 bp GACAGTAAAGCATGCCAGATGTCGCTACGCCTCAAATaGCAGCAAGTCCATGTTCGTTTAAATGTACAAAAA +
Preference number: 3 (lower is better)
Translates to: DSKACQMSLRLK*QQVHVRLNVQK
Trigger: TTTTTGTACATTTAAACGAACATGGACTTGCTGTCATTTGAGGCGTAGCGACATCTGGCATGCTTTACTGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
3UTR CCA 72 bp AAGTCCATCAGGAAGAGAACCCTTTTATGGCTTAATTaGAATGGAAATGGCTGCTCTTTCGTAGCAATGGTT +
Preference number: 3 (lower is better)
Translates to: KSIRKRTLLWLN*NGNGCSFVAMV
Trigger: AACCATTGCTACGAAAGAGCAGCCATTTCCATTCCAATTAAGCCATAAAAGGGTTCTCTTCCTGATGGACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
3UTR-3UTR CAA 90 bp TATGATCTGCTTATGATACATCATCCTCTACTAGAATTCTGTCACCACTTGCTTTTACTCAGACATGGCTaGGGAGTGACAGATTGGAAA +
Preference number: 3 (lower is better)
Translates to: YDLLMIHHPLLEFCHHLLLLRHG*GVTDWK
Trigger: TTTCCAATCTGTCACTCCCAAGCCATGTCTGAGTAA...AAGCAAGTGGTGACAGAATTCTAGTAGAGGATGATGTATCATAAGCAGATCATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
3UTR CCA 72 bp AGCTTTTGTACCTACGTTTACCTTCTCATCTCTAATTaGTCTCCTTATACTGTAAGTGGGTCTCTACCTACT +
Preference number: 3 (lower is better)
Translates to: SFCTYVYLLISN*SPYTVSGSLPT
Trigger: AGTAGGTAGAGACCCACTTACAGTATAAGGAGACCAATTAGAGATGAGAAGGTAAACGTAGGTACAAAAGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
3UTR-3UTR CAA 90 bp TGCTACGGTATATTACAGTTTGAGTTTCTAGGCACTGTGATGACATTATCTGTAAAGAACCTCCATACTTaGAATCAAGAGCTGGGTTCT +
Preference number: 3 (lower is better)
Translates to: CYGILQFEFLGTVMTLSVKNLHT*NQELGS
Trigger: AGAACCCAGCTCTTGATTCAAAGTATGGAGGTTCTT...TACAGATAATGTCATCACAGTGCCTAGAAACTCAAACTGTAATATACCGTAGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
3UTR TCA 72 bp TCACAGGTTAATGCCAATCAAATGGTGGATGTCTCTTaGGGTTTAATAAGCACCAGATTTCTCTCTTCTGTA +
Preference number: 3 (lower is better)
Translates to: SQVNANQMVDVS*GLISTRFLSSV
Trigger: TACAGAAGAGAGAAATCTGGTGCTTATTAAACCTCAAGAGACATCCACCATTTGATTGGCATTAACCTGTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
3UTR GCA 72 bp CTTTGTGGAAAGAAACGTGAAGAAACACCAAGAAGATaGTACGGTATATTACAGTTTGAGTTTCTAGGCACT +
Preference number: 3 (lower is better)
Translates to: LCGKKREETPRR*YGILQFEFLGT
Trigger: AGTGCCTAGAAACTCAAACTGTAATATACCGTAGCATCTTCTTGGTGTTTCTTCACGTTTCTTTCCACAAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
3UTR-3UTR CAA 90 bp TGCTACGGTATATTACAGTTTGAGTTTCTAGGCACTGTGATGACATTATCTGTAGGTAAATTTTCAGCTTaGCTTCCCCTTGGAATGTTT +
Preference number: 3 (lower is better)
Translates to: CYGILQFEFLGTVMTLSVGKFSA*LPLGMF
Trigger: AAACATTCCAAGGGGAAGCAAAGCTGAAAATTTACC...TACAGATAATGTCATCACAGTGCCTAGAAACTCAAACTGTAATATACCGTAGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
3UTR TCA 72 bp AGAAACACCAAGAAGATGCTACGGTATATTACAGTTTaGGTTTCTAGGCACTGTGATGACATTATCTGTAAG +
Preference number: 3 (lower is better)
Translates to: RNTKKMLRYITV*VSRHCDDIICK
Trigger: CTTACAGATAATGTCATCACAGTGCCTAGAAACTCAAACTGTAATATACCGTAGCATCTTCTTGGTGTTTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
3UTR CCA 72 bp GGATACTTTGTCCAAGGTGGCTTGATGCAATTGGAGTaGTGGTACCCTTTGAATACTTTATTCTATTTATTT +
Preference number: 3 (lower is better)
Translates to: GYFVQGGLMQLE*WYPLNTLFYLF
Trigger: AAATAAATAGAATAAAGTATTCAAAGGGTACCACCACTCCAATTGCATCAAGCCACCTTGGACAAAGTATCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR CCA 90 bp TCCTGCCCACCCGCTGTAGAGAGGGGCGGGGTGTCCCTGTGGCTGGGCATCAGCCTAGGGGACTCAGGCTaGGCTTCTGGCCTCTCTTGC +
Preference number: 4 (lower is better)
Translates to: SCPPAVERGGVSLWLGISLGDSG*ASGLSC
Trigger: GCAAGAGAGGCCAGAAGCCCAGCCTGAGTCCCCTAG...GCTGATGCCCAGCCACAGGGACACCCCGCCCCTCTCTACAGCGGGTGGGCAGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR GCA 90 bp TCCTGCCCACCCGCTGTAGAGAGGGGCGGGGTGTCCCTGTGGCTGGGCATCAGCTGTCACCAAGGCCCATaGCTACGGTTCCCTGCAAGT +
Preference number: 4 (lower is better)
Translates to: SCPPAVERGGVSLWLGISCHQGP*LRFPAS
Trigger: ACTTGCAGGGAACCGTAGGCATGGGCCTTGGTGACA...GCTGATGCCCAGCCACAGGGACACCCCGCCCCTCTCTACAGCGGGTGGGCAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR CCA 90 bp TCCTGCCCACCCGCTGTAGAGAGGGGCGGGGTGTCCCTGTGGCTGGGCATCAGCGCTACTGAGAGTGGGTaGCTCTGGGAGGTCCTTTGT +
Preference number: 4 (lower is better)
Translates to: SCPPAVERGGVSLWLGISATESG*LWEVLC
Trigger: ACAAAGGACCTCCCAGAGCCACCCACTCTCAGTAGC...GCTGATGCCCAGCCACAGGGACACCCCGCCCCTCTCTACAGCGGGTGGGCAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR TCA 90 bp TCCTGCCCACCCGCTGTAGAGAGGGGCGGGGTGTCCCTGTGGCTGGGCATCAGCGTTGTTGCCCGTCTTTaGTTGTCTCTGCAGCCGCTT +
Preference number: 4 (lower is better)
Translates to: SCPPAVERGGVSLWLGISVVARL*LSLQPL
Trigger: AAGCGGCTGCAGAGACAATCAAAGACGGGCAACAAC...GCTGATGCCCAGCCACAGGGACACCCCGCCCCTCTCTACAGCGGGTGGGCAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR CCA 90 bp TCCTGCCCACCCGCTGTAGAGAGGGGCGGGGTGTCCCTGTGGCTGGGCATCAGCCCACTCAGGTTGTCATaGGTCCCTAGGATTCGGTCT +
Preference number: 4 (lower is better)
Translates to: SCPPAVERGGVSLWLGISPLRLS*VPRIRS
Trigger: AGACCGAATCCTAGGGACCCATGACAACCTGAGTGG...GCTGATGCCCAGCCACAGGGACACCCCGCCCCTCTCTACAGCGGGTGGGCAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR CCA 90 bp TCCTGCCCACCCGCTGTAGAGAGGGGCGGGGTGTCCCTGTGGCTGGGCATCAGCTCCAGCACTGGCATTTaGTCTCTGGAGTCCTCATCG +
Preference number: 4 (lower is better)
Translates to: SCPPAVERGGVSLWLGISSSTGI*SLESSS
Trigger: CGATGAGGACTCCAGAGACCAAATGCCAGTGCTGGA...GCTGATGCCCAGCCACAGGGACACCCCGCCCCTCTCTACAGCGGGTGGGCAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR CCA 90 bp TCCTGCCCACCCGCTGTAGAGAGGGGCGGGGTGTCCCTGTGGCTGGGCATCAGCCCGTGGATTCCCTTCTaGGTTTTGGTTGGAAGAGCA +
Preference number: 4 (lower is better)
Translates to: SCPPAVERGGVSLWLGISPWIPF*VLVGRA
Trigger: TGCTCTTCCAACCAAAACCCAGAAGGGAATCCACGG...GCTGATGCCCAGCCACAGGGACACCCCGCCCCTCTCTACAGCGGGTGGGCAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR CCA 90 bp TCCTGCCCACCCGCTGTAGAGAGGGGCGGGGTGTCCCTGTGGCTGGGCATCAGCAGAGCACTGATGGGCTaGAGGTTCGGCATAGTTTTT +
Preference number: 4 (lower is better)
Translates to: SCPPAVERGGVSLWLGISRALMG*RFGIVF
Trigger: AAAAACTATGCCGAACCTCCAGCCCATCAGTGCTCT...GCTGATGCCCAGCCACAGGGACACCCCGCCCCTCTCTACAGCGGGTGGGCAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR GCA 90 bp TTGGAGGGGGTTCCCTCATTCCACTACCCCAAGAGCTCCCTAAAGCTCCACCCTTCTTGTGGAGCCTACTaGTGGACAGAGTGGCCCCGC +
Preference number: 4 (lower is better)
Translates to: LEGVPSFHYPKSSLKLHPSCGAY*WTEWPR
Trigger: GCGGGGCCACTCTGTCCAGCAGTAGGCTCCACAAGA...AGGGTGGAGCTTTAGGGAGCTCTTGGGGTAGTGGAATGAGGGAACCCCCTCCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR CCA 90 bp TCCTGCCCACCCGCTGTAGAGAGGGGCGGGGTGTCCCTGTGGCTGGGCATCAGCACGAAGATAGAGCAATaGGTCGTACTGGATATATGG +
Preference number: 4 (lower is better)
Translates to: SCPPAVERGGVSLWLGISTKIEQ*VVLDIW
Trigger: CCATATATCCAGTACGACCCATTGCTCTATCTTCGT...GCTGATGCCCAGCCACAGGGACACCCCGCCCCTCTCTACAGCGGGTGGGCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR GCA 90 bp TCCTGCCCACCCGCTGTAGAGAGGGGCGGGGTGTCCCTGTGGCTGGGCATCAGCCCATTTCTCACTGTCTaGATTAGAATTGCAATCCAC +
Preference number: 4 (lower is better)
Translates to: SCPPAVERGGVSLWLGISPFLTV*IRIAIH
Trigger: GTGGATTGCAATTCTAATGCAGACAGTGAGAAATGG...GCTGATGCCCAGCCACAGGGACACCCCGCCCCTCTCTACAGCGGGTGGGCAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR TCA 90 bp AGGAGGATCAGGTGGCCATCTTTGAGCACCAGCTTTGCGTTCCTCCGTCTTCTGAGGTGGGGATCTGGATaGGGAGCCCTGAAGGAATTC +
Preference number: 4 (lower is better)
Translates to: RRIRWPSLSTSFAFLRLLRWGSG*GALKEF
Trigger: GAATTCCTTCAGGGCTCCTCATCCAGATCCCCACCT...CAGAAGACGGAGGAACGCAAAGCTGGTGCTCAAAGATGGCCACCTGATCCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR GCA 90 bp TTGGAGGGGGTTCCCTCATTCCACTACCCCAAGAGCTCCCTAAAGCTCCACCCTGCAGGTCTTTGCTACTaGTGGACAACTGACTCCAGG +
Preference number: 4 (lower is better)
Translates to: LEGVPSFHYPKSSLKLHPAGLCY*WTTDSR
Trigger: CCTGGAGTCAGTTGTCCAGCAGTAGCAAAGACCTGC...AGGGTGGAGCTTTAGGGAGCTCTTGGGGTAGTGGAATGAGGGAACCCCCTCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR CCA 90 bp AGGAGGATCAGGTGGCCATCTTTGAGCACCAGCTTTGCGTTCCTCCGTCTTCTGTGTGCTGGTGTCGGATaGAATGGCCTCTGGGTTGTC +
Preference number: 4 (lower is better)
Translates to: RRIRWPSLSTSFAFLRLLCAGVG*NGLWVV
Trigger: GACAACCCAGAGGCCATTCCATCCGACACCAGCACA...CAGAAGACGGAGGAACGCAAAGCTGGTGCTCAAAGATGGCCACCTGATCCTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR GCA 90 bp AGGAGGATCAGGTGGCCATCTTTGAGCACCAGCTTTGCGTTCCTCCGTCTTCTGCTCTTGAGCACTGTCTaGAGAGTAGGCCTCCCGTTT +
Preference number: 4 (lower is better)
Translates to: RRIRWPSLSTSFAFLRLLLLSTV*RVGLPF
Trigger: AAACGGGAGGCCTACTCTGCAGACAGTGCTCAAGAG...CAGAAGACGGAGGAACGCAAAGCTGGTGCTCAAAGATGGCCACCTGATCCTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR GCA 90 bp TTGGAGGGGGTTCCCTCATTCCACTACCCCAAGAGCTCCCTAAAGCTCCACCCTCTTTACATGAGAACTTaGGTGGAACTGGGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: LEGVPSFHYPKSSLKLHPLYMRT*VELGWW
Trigger: CCACCACCCCAGTTCCACGCAAGTTCTCATGTAAAG...AGGGTGGAGCTTTAGGGAGCTCTTGGGGTAGTGGAATGAGGGAACCCCCTCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR CCA 90 bp AGGAGGATCAGGTGGCCATCTTTGAGCACCAGCTTTGCGTTCCTCCGTCTTCTGGTCCACTGTCAGAGTTaGAGGACCATTCCATGTGGC +
Preference number: 4 (lower is better)
Translates to: RRIRWPSLSTSFAFLRLLVHCQS*RTIPCG
Trigger: GCCACATGGAATGGTCCTCCAACTCTGACAGTGGAC...CAGAAGACGGAGGAACGCAAAGCTGGTGCTCAAAGATGGCCACCTGATCCTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR CCA 90 bp TTGGAGGGGGTTCCCTCATTCCACTACCCCAAGAGCTCCCTAAAGCTCCACCCTTCTCCGGGCACTAACTaGGCCAATTTAGCCAGATTG +
Preference number: 4 (lower is better)
Translates to: LEGVPSFHYPKSSLKLHPSPGTN*ANLARL
Trigger: CAATCTGGCTAAATTGGCCCAGTTAGTGCCCGGAGA...AGGGTGGAGCTTTAGGGAGCTCTTGGGGTAGTGGAATGAGGGAACCCCCTCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR CCA 90 bp AGGAGGATCAGGTGGCCATCTTTGAGCACCAGCTTTGCGTTCCTCCGTCTTCTGTGGAAGCTCTGTCCTTaGCTTCCTGCCCCTCTTCTT +
Preference number: 4 (lower is better)
Translates to: RRIRWPSLSTSFAFLRLLWKLCP*LPAPLL
Trigger: AAGAAGAGGGGCAGGAAGCCAAGGACAGAGCTTCCA...CAGAAGACGGAGGAACGCAAAGCTGGTGCTCAAAGATGGCCACCTGATCCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR TCA 90 bp TTGGAGGGGGTTCCCTCATTCCACTACCCCAAGAGCTCCCTAAAGCTCCACCCTAAGGATTCATTTCACTaGACACATCCAGACCCTCCG +
Preference number: 4 (lower is better)
Translates to: LEGVPSFHYPKSSLKLHPKDSFH*THPDPP
Trigger: CGGAGGGTCTGGATGTGTTCAGTGAAATGAATCCTT...AGGGTGGAGCTTTAGGGAGCTCTTGGGGTAGTGGAATGAGGGAACCCCCTCCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR TCA 90 bp CTGACACTTGGGTCGACATATCCATCGGCTGCTCTGAGTCACTTATTAAAAAGCCCCGAGCCATGTGGATaGCAGCCTCGATGGTGGCCA +
Preference number: 4 (lower is better)
Translates to: LTLGSTYPSAALSHLLKSPEPCG*QPRWWP
Trigger: TGGCCACCATCGAGGCTGTCATCCACATGGCTCGGG...GCTTTTTAATAAGTGACTCAGAGCAGCCGATGGATATGTCGACCCAAGTGTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR GCA 90 bp AGGAGGATCAGGTGGCCATCTTTGAGCACCAGCTTTGCGTTCCTCCGTCTTCTGTCCTGCCCCTCTTCTTaGCTATGTAGATGGTTCCTC +
Preference number: 4 (lower is better)
Translates to: RRIRWPSLSTSFAFLRLLSCPSS*LCRWFL
Trigger: GAGGAACCATCTACATAGGCAAGAAGAGGGGCAGGA...CAGAAGACGGAGGAACGCAAAGCTGGTGCTCAAAGATGGCCACCTGATCCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR GCA 90 bp AGTATAAAAATAACCTGGCTGACACTTGGGTCGACATATCCATCGGCTGCTCTGGGCTGCGCTGGGGGCTaGGGTCTGTGTTTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: SIKITWLTLGSTYPSAALGCAGG*GLCFLF
Trigger: GAAGAGGAAACACAGACCGCAGCCCCCAGCGCAGCC...CAGAGCAGCCGATGGATATGTCGACCCAAGTGTCAGCCAGGTTATTTTTATACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR CCA 90 bp CTTTTGAGGCATTTCAGCTCCCGCCACTCCCCCTCTATGCTACAGTTGGCATTTGCCGGTTCTTTGTGCTaGTGTCGGATGGAATGGCCT +
Preference number: 4 (lower is better)
Translates to: LLRHFSSRHSPSMLQLAFAGSLC*CRMEWP
Trigger: AGGCCATTCCATCCGACACCAGCACAAAGAACCGGC...AAATGCCAACTGTAGCATAGAGGGGGAGTGGCGGGAGCTGAAATGCCTCAAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR CCA 90 bp AGGAGGATCAGGTGGCCATCTTTGAGCACCAGCTTTGCGTTCCTCCGTCTTCTGCTGGCATTTGGTCTCTaGAGTCCTCATCGAACTGTG +
Preference number: 4 (lower is better)
Translates to: RRIRWPSLSTSFAFLRLLLAFGL*SPHRTV
Trigger: CACAGTTCGATGAGGACTCCAGAGACCAAATGCCAG...CAGAAGACGGAGGAACGCAAAGCTGGTGCTCAAAGATGGCCACCTGATCCTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR TCA 90 bp CTTTTGAGGCATTTCAGCTCCCGCCACTCCCCCTCTATGCTACAGTTGGCATTTGAAAAGTGTCCACAATaGGATGCTTCTGCCGGTGGC +
Preference number: 4 (lower is better)
Translates to: LLRHFSSRHSPSMLQLAFEKCPQ*DASAGG
Trigger: GCCACCGGCAGAAGCATCTCATTGTGGACACTTTTC...AAATGCCAACTGTAGCATAGAGGGGGAGTGGCGGGAGCTGAAATGCCTCAAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR GCA 90 bp CCATTGAACATGGCCTCCCACTTCAGACGGCAGCCAAGTTTATACACCGTTCTAACAGTGAGCAGAGGTTaGTTCTTTGGTCGTCCCCGC +
Preference number: 4 (lower is better)
Translates to: PLNMASHFRRQPSLYTVLTVSRG*FFGRPR
Trigger: GCGGGGACGACCAAAGAAGCAACCTCTGCTCACTGT...TAGAACGGTGTATAAACTTGGCTGCCGTCTGAAGTGGGAGGCCATGTTCAATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR GCA 90 bp CCATTGAACATGGCCTCCCACTTCAGACGGCAGCCAAGTTTATACACCGTTCTAGACACAGGCCTGGGGTaGTTGATGGCTGTTTTGGGT +
Preference number: 4 (lower is better)
Translates to: PLNMASHFRRQPSLYTVLDTGLG*LMAVLG
Trigger: ACCCAAAACAGCCATCAAGCACCCCAGGCCTGTGTC...TAGAACGGTGTATAAACTTGGCTGCCGTCTGAAGTGGGAGGCCATGTTCAATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR CCA 90 bp TTGGAGGGGGTTCCCTCATTCCACTACCCCAAGAGCTCCCTAAAGCTCCACCCTGTTTCAAATGCTTTCTaGGCACTCTTGACCCAATCC +
Preference number: 4 (lower is better)
Translates to: LEGVPSFHYPKSSLKLHPVSNAF*ALLTQS
Trigger: GGATTGGGTCAAGAGTGCCCAGAAAGCATTTGAAAC...AGGGTGGAGCTTTAGGGAGCTCTTGGGGTAGTGGAATGAGGGAACCCCCTCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR CCA 90 bp AGTATAAAAATAACCTGGCTGACACTTGGGTCGACATATCCATCGGCTGCTCTGGCGGTTTCCTCTGCTTaGACGCACCTCCGGGGACAA +
Preference number: 4 (lower is better)
Translates to: SIKITWLTLGSTYPSAALAVSSA*THLRGQ
Trigger: TTGTCCCCGGAGGTGCGTCCAAGCAGAGGAAACCGC...CAGAGCAGCCGATGGATATGTCGACCCAAGTGTCAGCCAGGTTATTTTTATACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR CCA 90 bp CAGAGGGAGCCTTGCTTTGTGGAAAGAAACGTGAAGAAACACCAAGAAGATGCTTCTCTGGGGGAGCTTTaGCCTTTAGGGCCACGCTGC +
Preference number: 4 (lower is better)
Translates to: QREPCFVERNVKKHQEDASLGEL*PLGPRC
Trigger: GCAGCGTGGCCCTAAAGGCCAAAGCTCCCCCAGAGA...AGCATCTTCTTGGTGTTTCTTCACGTTTCTTTCCACAAAGCAAGGCTCCCTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR CCA 90 bp CCATTGAACATGGCCTCCCACTTCAGACGGCAGCCAAGTTTATACACCGTTCTATTCCTCGGATGGGGGTaGAAGCTCTGTCCTTGGCTT +
Preference number: 4 (lower is better)
Translates to: PLNMASHFRRQPSLYTVLFLGWG*KLCPWL
Trigger: AAGCCAAGGACAGAGCTTCCACCCCCATCCGAGGAA...TAGAACGGTGTATAAACTTGGCTGCCGTCTGAAGTGGGAGGCCATGTTCAATGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR CCA 90 bp GAGTTACTCAGACATGGCTTGGGAGTGACAGATTGGAAATGGCTGTTTAGATTTGCTGGAACGTCCGGCTaGCTAGACACAGGCCTGGGG +
Preference number: 4 (lower is better)
Translates to: ELLRHGLGVTDWKWLFRFAGTSG*LDTGLG
Trigger: CCCCAGGCCTGTGTCTAGCCAGCCGGACGTTCCAGC...AAATCTAAACAGCCATTTCCAATCTGTCACTCCCAAGCCATGTCTGAGTAACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR CCA 90 bp AGTATAAAAATAACCTGGCTGACACTTGGGTCGACATATCCATCGGCTGCTCTGCTGGCCTCCCCGTGCTaGTGCTTCTGTCTCTCCTTG +
Preference number: 4 (lower is better)
Translates to: SIKITWLTLGSTYPSAALLASPC*CFCLSL
Trigger: CAAGGAGAGACAGAAGCACCAGCACGGGGAGGCCAG...CAGAGCAGCCGATGGATATGTCGACCCAAGTGTCAGCCAGGTTATTTTTATACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR CCA 90 bp TTGGAGGGGGTTCCCTCATTCCACTACCCCAAGAGCTCCCTAAAGCTCCACCCTTTCATCTTGAAGGCTTaGATGTCCTTCTCCCTGTAC +
Preference number: 4 (lower is better)
Translates to: LEGVPSFHYPKSSLKLHPFILKA*MSFSLY
Trigger: GTACAGGGAGAAGGACATCCAAGCCTTCAAGATGAA...AGGGTGGAGCTTTAGGGAGCTCTTGGGGTAGTGGAATGAGGGAACCCCCTCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR CCA 90 bp CTTTTGAGGCATTTCAGCTCCCGCCACTCCCCCTCTATGCTACAGTTGGCATTTGCACTTCGCATTGGATaGCTTCGATCTCCCGTCTCT +
Preference number: 4 (lower is better)
Translates to: LLRHFSSRHSPSMLQLAFALRIG*LRSPVS
Trigger: AGAGACGGGAGATCGAAGCCATCCAATGCGAAGTGC...AAATGCCAACTGTAGCATAGAGGGGGAGTGGCGGGAGCTGAAATGCCTCAAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR CCA 90 bp CTGACACTTGGGTCGACATATCCATCGGCTGCTCTGAGTCACTTATTAAAAAGCGGCTCGGGACTTCCGTaGCCTTTTGGCCTTCACCTC +
Preference number: 4 (lower is better)
Translates to: LTLGSTYPSAALSHLLKSGSGLP*PFGLHL
Trigger: GAGGTGAAGGCCAAAAGGCCACGGAAGTCCCGAGCC...GCTTTTTAATAAGTGACTCAGAGCAGCCGATGGATATGTCGACCCAAGTGTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR TCA 90 bp TTGGAGGGGGTTCCCTCATTCCACTACCCCAAGAGCTCCCTAAAGCTCCACCCTATAGTAATCCGGACATaGCTGGAATCATTTTCCGGA +
Preference number: 4 (lower is better)
Translates to: LEGVPSFHYPKSSLKLHPIVIRT*LESFSG
Trigger: TCCGGAAAATGATTCCAGTCATGTCCGGATTACTAT...AGGGTGGAGCTTTAGGGAGCTCTTGGGGTAGTGGAATGAGGGAACCCCCTCCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR TCA 90 bp CTGACACTTGGGTCGACATATCCATCGGCTGCTCTGAGTCACTTATTAAAAAGCCTCAGACAGCTTTCCTaGTGGAGCGTGCTCTGTGCG +
Preference number: 4 (lower is better)
Translates to: LTLGSTYPSAALSHLLKSLRQLS*WSVLCA
Trigger: CGCACAGAGCACGCTCCATCAGGAAAGCTGTCTGAG...GCTTTTTAATAAGTGACTCAGAGCAGCCGATGGATATGTCGACCCAAGTGTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR TCA 90 bp CAGAGGGAGCCTTGCTTTGTGGAAAGAAACGTGAAGAAACACCAAGAAGATGCTCCTCCGCCGGGATTCTaGACTCTTCTCTGCTTGGTC +
Preference number: 4 (lower is better)
Translates to: QREPCFVERNVKKHQEDAPPPGF*TLLCLV
Trigger: GACCAAGCAGAGAAGAGTTCAGAATCCCGGCGGAGG...AGCATCTTCTTGGTGTTTCTTCACGTTTCTTTCCACAAAGCAAGGCTCCCTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR GCA 90 bp AGTATAAAAATAACCTGGCTGACACTTGGGTCGACATATCCATCGGCTGCTCTGCCTCCTCTGGCTCCATaGGTTCTCCACCCACAGAGA +
Preference number: 4 (lower is better)
Translates to: SIKITWLTLGSTYPSAALPPLAP*VLHPQR
Trigger: TCTCTGTGGGTGGAGAACGCATGGAGCCAGAGGAGG...CAGAGCAGCCGATGGATATGTCGACCCAAGTGTCAGCCAGGTTATTTTTATACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR GCA 90 bp CTTTTGAGGCATTTCAGCTCCCGCCACTCCCCCTCTATGCTACAGTTGGCATTTGCTACACCTCCTTTTTaGAGCAAACTTGGGGTGCTG +
Preference number: 4 (lower is better)
Translates to: LLRHFSSRHSPSMLQLAFATPPF*SKLGVL
Trigger: CAGCACCCCAAGTTTGCTGCAAAAAGGAGGTGTAGC...AAATGCCAACTGTAGCATAGAGGGGGAGTGGCGGGAGCTGAAATGCCTCAAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR GCA 90 bp CTGACACTTGGGTCGACATATCCATCGGCTGCTCTGAGTCACTTATTAAAAAGCTGGCGGGGCTCAGGTTaGCATTGGACCCACCTAACT +
Preference number: 4 (lower is better)
Translates to: LTLGSTYPSAALSHLLKSWRGSG*HWTHLT
Trigger: AGTTAGGTGGGTCCAATGGCAACCTGAGCCCCGCCA...GCTTTTTAATAAGTGACTCAGAGCAGCCGATGGATATGTCGACCCAAGTGTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR GCA 90 bp CTGACACTTGGGTCGACATATCCATCGGCTGCTCTGAGTCACTTATTAAAAAGCGCCTCCCCGTGCTGGTaGTTCTGTCTCTCCTTGTGT +
Preference number: 4 (lower is better)
Translates to: LTLGSTYPSAALSHLLKSASPCW*FCLSLC
Trigger: ACACAAGGAGAGACAGAAGCACCAGCACGGGGAGGC...GCTTTTTAATAAGTGACTCAGAGCAGCCGATGGATATGTCGACCCAAGTGTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR CCA 90 bp CCATTGAACATGGCCTCCCACTTCAGACGGCAGCCAAGTTTATACACCGTTCTAGTCTCGGCCAGCCTCTaGACTGATGAAGCAATTCTG +
Preference number: 4 (lower is better)
Translates to: PLNMASHFRRQPSLYTVLVSASL*TDEAIL
Trigger: CAGAATTGCTTCATCAGTCCAGAGGCTGGCCGAGAC...TAGAACGGTGTATAAACTTGGCTGCCGTCTGAAGTGGGAGGCCATGTTCAATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR CCA 90 bp CTTTTGAGGCATTTCAGCTCCCGCCACTCCCCCTCTATGCTACAGTTGGCATTTGCAAACTTGGGGTGCTaGATCTCAGACAGCTTTCCT +
Preference number: 4 (lower is better)
Translates to: LLRHFSSRHSPSMLQLAFANLGC*ISDSFP
Trigger: AGGAAAGCTGTCTGAGATCCAGCACCCCAAGTTTGC...AAATGCCAACTGTAGCATAGAGGGGGAGTGGCGGGAGCTGAAATGCCTCAAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR CCA 90 bp CAATCAAATGGTGGATGTCTCTTGAGGTTTAATAAGCACCAGATTTCTCTCTTCGGCCATCAGCCGGGGTaGGGACAGCTTCCAGGTCCC +
Preference number: 4 (lower is better)
Translates to: QSNGGCLLRFNKHQISLFGHQPG*GQLPGP
Trigger: GGGACCTGGAAGCTGTCCCCACCCCGGCTGATGGCC...GAAGAGAGAAATCTGGTGCTTATTAAACCTCAAGAGACATCCACCATTTGATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR CCA 90 bp AGTATAAAAATAACCTGGCTGACACTTGGGTCGACATATCCATCGGCTGCTCTGAGATGCTTCTGCCGGTaGCCGTGCCGGTTCTTTGTG +
Preference number: 4 (lower is better)
Translates to: SIKITWLTLGSTYPSAALRCFCR*PCRFFV
Trigger: CACAAAGAACCGGCACGGCCACCGGCAGAAGCATCT...CAGAGCAGCCGATGGATATGTCGACCCAAGTGTCAGCCAGGTTATTTTTATACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR TCA 90 bp CTTTTGAGGCATTTCAGCTCCCGCCACTCCCCCTCTATGCTACAGTTGGCATTTCTGATGAAGCAATTCTaGGTAGCTGGTCCACTGTCA +
Preference number: 4 (lower is better)
Translates to: LLRHFSSRHSPSMLQLAFLMKQF*VAGPLS
Trigger: TGACAGTGGACCAGCTACTCAGAATTGCTTCATCAG...AAATGCCAACTGTAGCATAGAGGGGGAGTGGCGGGAGCTGAAATGCCTCAAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR GCA 90 bp AGTATAAAAATAACCTGGCTGACACTTGGGTCGACATATCCATCGGCTGCTCTGCTCCACCCACAGAGATaGCTTTCAAGGGCTCTCCTG +
Preference number: 4 (lower is better)
Translates to: SIKITWLTLGSTYPSAALLHPQR*LSRALL
Trigger: CAGGAGAGCCCTTGAAAGGCATCTCTGTGGGTGGAG...CAGAGCAGCCGATGGATATGTCGACCCAAGTGTCAGCCAGGTTATTTTTATACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR GCA 90 bp GAGTTACTCAGACATGGCTTGGGAGTGACAGATTGGAAATGGCTGTTTAGATTTGACCTTGCTGGTGCTTaGAGTGTCTCGGCCAGCCTC +
Preference number: 4 (lower is better)
Translates to: ELLRHGLGVTDWKWLFRFDLAGA*SVSASL
Trigger: GAGGCTGGCCGAGACACTGCAAGCACCAGCAAGGTC...AAATCTAAACAGCCATTTCCAATCTGTCACTCCCAAGCCATGTCTGAGTAACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR GCA 90 bp GAGTTACTCAGACATGGCTTGGGAGTGACAGATTGGAAATGGCTGTTTAGATTTCTGGGGAGTTGTGGCTaGTGGGGGATGGTACCACAC +
Preference number: 4 (lower is better)
Translates to: ELLRHGLGVTDWKWLFRFLGSCG*WGMVPH
Trigger: GTGTGGTACCATCCCCCAGCAGCCACAACTCCCCAG...AAATCTAAACAGCCATTTCCAATCTGTCACTCCCAAGCCATGTCTGAGTAACTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR CCA 90 bp CTTTTGAGGCATTTCAGCTCCCGCCACTCCCCCTCTATGCTACAGTTGGCATTTTGGTGGACAGAAGCTTaGTGTAATGGCACATCTTCC +
Preference number: 4 (lower is better)
Translates to: LLRHFSSRHSPSMLQLAFWWTEA*CNGTSS
Trigger: GGAAGATGTGCCATTACACCAAGCTTCTGTCCACCA...AAATGCCAACTGTAGCATAGAGGGGGAGTGGCGGGAGCTGAAATGCCTCAAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
3UTR CAA 72 bp CAAGAGCTGGGTTCTCTTTCTGGCTGTAAAAACCACTaGGATGTGGAAATTCAACTGGCTTCGTGGAGGGGC +
Preference number: 4 (lower is better)
Translates to: QELGSLSGCKNH*DVEIQLASWRG
Trigger: GCCCCTCCACGAAGCCAGTTGAATTTCCACATCCAAGTGGTTTTTACAGCCAGAAAGAGAACCCAGCTCTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
3UTR CAA 72 bp ATACAGCAATGTGCAGAACACACATTTGGACTGCCATaGAACATGGCCTCCCACTTCAGACGGCAGCCAAGT +
Preference number: 4 (lower is better)
Translates to: IQQCAEHTFGLP*NMASHFRRQPS
Trigger: ACTTGGCTGCCGTCTGAAGTGGGAGGCCATGTTCAATGGCAGTCCAAATGTGTGTTCTGCACATTGCTGTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
3UTR CAA 72 bp AAAGACACCAATCCAGGGCAGAACTACCCTTCCAGATaGACCAGTTGGCAGCTCTTCGGTTTTCCCCTCTTT +
Preference number: 4 (lower is better)
Translates to: KDTNPGQNYPSR*TSWQLFGFPLF
Trigger: AAAGAGGGGAAAACCGAAGAGCTGCCAACTGGTCAATCTGGAAGGGTAGTTCTGCCCTGGATTGGTGTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR GCA 90 bp CAATCAAATGGTGGATGTCTCTTGAGGTTTAATAAGCACCAGATTTCTCTCTTCCTGCCGGGCTGGCGATaGCTCTTGAGCACTGTCTGC +
Preference number: 4 (lower is better)
Translates to: QSNGGCLLRFNKHQISLFLPGWR*LLSTVC
Trigger: GCAGACAGTGCTCAAGAGGCATCGCCAGCCCGGCAG...GAAGAGAGAAATCTGGTGCTTATTAAACCTCAAGAGACATCCACCATTTGATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR CCA 90 bp CTAAACTGTACTGAGTTATGTTTCACAATGATTGGGATTCAAAGCCGGTTCCTTGCTGGAAGGCACGGCTaGAACGTCCGGCTGGCTAGA +
Preference number: 4 (lower is better)
Translates to: LNCTELCFTMIGIQSRFLAGRHG*NVRLAR
Trigger: TCTAGCCAGCCGGACGTTCCAGCCGTGCCTTCCAGC...AAGGAACCGGCTTTGAATCCCAATCATTGTGAAACATAACTCAGTACAGTTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR CCA 90 bp CAGAGGGAGCCTTGCTTTGTGGAAAGAAACGTGAAGAAACACCAAGAAGATGCTGGCTCAGGTTGCCATTaGACCCACCTAACTGTGTTG +
Preference number: 4 (lower is better)
Translates to: QREPCFVERNVKKHQEDAGSGCH*THLTVL
Trigger: CAACACAGTTAGGTGGGTCCAATGGCAACCTGAGCC...AGCATCTTCTTGGTGTTTCTTCACGTTTCTTTCCACAAAGCAAGGCTCCCTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR CCA 90 bp CTTTTGAGGCATTTCAGCTCCCGCCACTCCCCCTCTATGCTACAGTTGGCATTTGTCGTACTGGATATATaGCACCGGGTAATACTGATC +
Preference number: 4 (lower is better)
Translates to: LLRHFSSRHSPSMLQLAFVVLDI*HRVILI
Trigger: GATCAGTATTACCCGGTGCCATATATCCAGTACGAC...AAATGCCAACTGTAGCATAGAGGGGGAGTGGCGGGAGCTGAAATGCCTCAAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR CCA 90 bp CTTTTGAGGCATTTCAGCTCCCGCCACTCCCCCTCTATGCTACAGTTGGCATTTTTGTCATGGTGTCATTaGTTTTTGCAGGCCTACCAC +
Preference number: 4 (lower is better)
Translates to: LLRHFSSRHSPSMLQLAFLSWCH*FLQAYH
Trigger: GTGGTAGGCCTGCAAAAACCAATGACACCATGACAA...AAATGCCAACTGTAGCATAGAGGGGGAGTGGCGGGAGCTGAAATGCCTCAAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR CCA 90 bp GAGTTACTCAGACATGGCTTGGGAGTGACAGATTGGAAATGGCTGTTTAGATTTGTGGAACTGGGGTGGTaGCACTGTCGGCCTCATGAA +
Preference number: 4 (lower is better)
Translates to: ELLRHGLGVTDWKWLFRFVELGW*HCRPHE
Trigger: TTCATGAGGCCGACAGTGCCACCACCCCAGTTCCAC...AAATCTAAACAGCCATTTCCAATCTGTCACTCCCAAGCCATGTCTGAGTAACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR CCA 90 bp CCATTGAACATGGCCTCCCACTTCAGACGGCAGCCAAGTTTATACACCGTTCTACAGTTGGCTTCTTCCTaGCCATCATGGCAGATATTG +
Preference number: 4 (lower is better)
Translates to: PLNMASHFRRQPSLYTVLQLASS*PSWQIL
Trigger: CAATATCTGCCATGATGGCCAGGAAGAAGCCAACTG...TAGAACGGTGTATAAACTTGGCTGCCGTCTGAAGTGGGAGGCCATGTTCAATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR GCA 90 bp AGACAGATATCCAGGAAGTTCCTTCCTTGGTTGATATGTGCTTCTATGACTGTTGTGTCCACAATGAGATaGTTCTGCCGGTGGCCGTGC +
Preference number: 4 (lower is better)
Translates to: RQISRKFLPWLICASMTVVSTMR*FCRWPC
Trigger: GCACGGCCACCGGCAGAAGCATCTCATTGTGGACAC...AACAGTCATAGAAGCACATATCAACCAAGGAAGGAACTTCCTGGATATCTGTCT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR GCA 90 bp TATGATCTGCTTATGATACATCATCCTCTACTAGAATTCTGTCACCACTTGCTTTGGCTGGCCTCCCCGTaGTGGTGCTTCTGTCTCTCC +
Preference number: 4 (lower is better)
Translates to: YDLLMIHHPLLEFCHHLLWLASP*WCFCLS
Trigger: GGAGAGACAGAAGCACCAGCACGGGGAGGCCAGCCA...AAGCAAGTGGTGACAGAATTCTAGTAGAGGATGATGTATCATAAGCAGATCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR GCA 90 bp CAGAGGGAGCCTTGCTTTGTGGAAAGAAACGTGAAGAAACACCAAGAAGATGCTTGCTGGGTAGGTCAATaGACTTTTCCAGCACTGGCA +
Preference number: 4 (lower is better)
Translates to: QREPCFVERNVKKHQEDACWVGQ*TFPALA
Trigger: TGCCAGTGCTGGAAAAGTGCATTGACCTACCCAGCA...AGCATCTTCTTGGTGTTTCTTCACGTTTCTTTCCACAAAGCAAGGCTCCCTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR CCA 90 bp CCATTGAACATGGCCTCCCACTTCAGACGGCAGCCAAGTTTATACACCGTTCTAGATCTTGATCTCAGGTaGGCAGATATAGTTCTCCAG +
Preference number: 4 (lower is better)
Translates to: PLNMASHFRRQPSLYTVLDLDLR*ADIVLQ
Trigger: CTGGAGAACTATATCTGCCCACCTGAGATCAAGATC...TAGAACGGTGTATAAACTTGGCTGCCGTCTGAAGTGGGAGGCCATGTTCAATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR CCA 90 bp CTAAACTGTACTGAGTTATGTTTCACAATGATTGGGATTCAAAGCCGGTTCCTTGAGCTGGGACCTTGCTaGTGCTTGCAGTGTCTCGGC +
Preference number: 4 (lower is better)
Translates to: LNCTELCFTMIGIQSRFLELGPC*CLQCLG
Trigger: GCCGAGACACTGCAAGCACCAGCAAGGTCCCAGCTC...AAGGAACCGGCTTTGAATCCCAATCATTGTGAAACATAACTCAGTACAGTTTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR CCA 90 bp CAGAGGGAGCCTTGCTTTGTGGAAAGAAACGTGAAGAAACACCAAGAAGATGCTACTTCATTTCGCTCATaGGTTTGTCCTCTCCGGGCA +
Preference number: 4 (lower is better)
Translates to: QREPCFVERNVKKHQEDATSFRS*VCPLRA
Trigger: TGCCCGGAGAGGACAAACCCATGAGCGAAATGAAGT...AGCATCTTCTTGGTGTTTCTTCACGTTTCTTTCCACAAAGCAAGGCTCCCTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR CCA 90 bp CAGAGGGAGCCTTGCTTTGTGGAAAGAAACGTGAAGAAACACCAAGAAGATGCTCTTCTGGGTTTTGGTTaGAAGAGCACTGATGGGCTG +
Preference number: 4 (lower is better)
Translates to: QREPCFVERNVKKHQEDALLGFG*KSTDGL
Trigger: CAGCCCATCAGTGCTCTTCCAACCAAAACCCAGAAG...AGCATCTTCTTGGTGTTTCTTCACGTTTCTTTCCACAAAGCAAGGCTCCCTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR CCA 90 bp CAGAGGGAGCCTTGCTTTGTGGAAAGAAACGTGAAGAAACACCAAGAAGATGCTGAACTCTTCTCTGCTTaGTCGGAGGTGCTGTTGTTG +
Preference number: 4 (lower is better)
Translates to: QREPCFVERNVKKHQEDAELFSA*SEVLLL
Trigger: CAACAACAGCACCTCCGACCAAGCAGAGAAGAGTTC...AGCATCTTCTTGGTGTTTCTTCACGTTTCTTTCCACAAAGCAAGGCTCCCTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR CCA 90 bp CAATCAAATGGTGGATGTCTCTTGAGGTTTAATAAGCACCAGATTTCTCTCTTCTGCGTGGAACTGGGGTaGTGGCACTGTCGGCCTCAT +
Preference number: 4 (lower is better)
Translates to: QSNGGCLLRFNKHQISLFCVELG*WHCRPH
Trigger: ATGAGGCCGACAGTGCCACCACCCCAGTTCCACGCA...GAAGAGAGAAATCTGGTGCTTATTAAACCTCAAGAGACATCCACCATTTGATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR CCA 90 bp AGACAGATATCCAGGAAGTTCCTTCCTTGGTTGATATGTGCTTCTATGACTGTTGGGAGGGTTCAGGGATaGCTGTATGTCACCAAGGCC +
Preference number: 4 (lower is better)
Translates to: RQISRKFLPWLICASMTVGRVQG*LYVTKA
Trigger: GGCCTTGGTGACATACAGCCATCCCTGAACCCTCCC...AACAGTCATAGAAGCACATATCAACCAAGGAAGGAACTTCCTGGATATCTGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR CCA 90 bp AGTATAAAAATAACCTGGCTGACACTTGGGTCGACATATCCATCGGCTGCTCTGCTGTGTGCTGCTGTCTaGTCCACTTTTAAGTGGGGA +
Preference number: 4 (lower is better)
Translates to: SIKITWLTLGSTYPSAALLCAAV*STFKWG
Trigger: TCCCCACTTAAAAGTGGACCAGACAGCAGCACACAG...CAGAGCAGCCGATGGATATGTCGACCCAAGTGTCAGCCAGGTTATTTTTATACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR CCA 90 bp CTGACACTTGGGTCGACATATCCATCGGCTGCTCTGAGTCACTTATTAAAAAGCGCACTTTTCCAGCACTaGCATTTGGTCTCTGGAGTC +
Preference number: 4 (lower is better)
Translates to: LTLGSTYPSAALSHLLKSALFQH*HLVSGV
Trigger: GACTCCAGAGACCAAATGCCAGTGCTGGAAAAGTGC...GCTTTTTAATAAGTGACTCAGAGCAGCCGATGGATATGTCGACCCAAGTGTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR CCA 90 bp TATGATCTGCTTATGATACATCATCCTCTACTAGAATTCTGTCACCACTTGCTTTTCACCTCCTCTTCCTaGGGAAGGGGCTGCGGCGTG +
Preference number: 4 (lower is better)
Translates to: YDLLMIHHPLLEFCHHLLFTSSS*GRGCGV
Trigger: CACGCCGCAGCCCCTTCCCCAGGAAGAGGAGGTGAA...AAGCAAGTGGTGACAGAATTCTAGTAGAGGATGATGTATCATAAGCAGATCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR TCA 90 bp GAGTTACTCAGACATGGCTTGGGAGTGACAGATTGGAAATGGCTGTTTAGATTTTGTGCTTTGGCTTCTTaGGGCTTTCGTGGGCCAGAA +
Preference number: 4 (lower is better)
Translates to: ELLRHGLGVTDWKWLFRFCALAS*GFRGPE
Trigger: TTCTGGCCCACGAAAGCCTCAAGAAGCCAAAGCACA...AAATCTAAACAGCCATTTCCAATCTGTCACTCCCAAGCCATGTCTGAGTAACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR TCA 90 bp TCTGCTTATGATACATCATCCTCTACTAGAATTCTGTCACCACTTGCTTATCATGTCCTCATCGAACTGTaGGGGCTGCTTCCTAGGCCG +
Preference number: 4 (lower is better)
Translates to: SAYDTSSSTRILSPLAYHVLIEL*GLLPRP
Trigger: CGGCCTAGGAAGCAGCCCTCACAGTTCGATGAGGAC...ATGATAAGCAAGTGGTGACAGAATTCTAGTAGAGGATGATGTATCATAAGCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR GCA 90 bp AGTATAAAAATAACCTGGCTGACACTTGGGTCGACATATCCATCGGCTGCTCTGTGTGTTGAGAGTGGGTaGATAGCTGCTGGTGAAGAA +
Preference number: 4 (lower is better)
Translates to: SIKITWLTLGSTYPSAALCVESG*IAAGEE
Trigger: TTCTTCACCAGCAGCTATGCACCCACTCTCAACACA...CAGAGCAGCCGATGGATATGTCGACCCAAGTGTCAGCCAGGTTATTTTTATACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR GCA 90 bp AGACAGATATCCAGGAAGTTCCTTCCTTGGTTGATATGTGCTTCTATGACTGTTCGTGCCGGTTCTTTGTaGTGGTGTCGGATGGAATGG +
Preference number: 4 (lower is better)
Translates to: RQISRKFLPWLICASMTVRAGSL*WCRMEW
Trigger: CCATTCCATCCGACACCAGCACAAAGAACCGGCACG...AACAGTCATAGAAGCACATATCAACCAAGGAAGGAACTTCCTGGATATCTGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR GCA 90 bp CTAAACTGTACTGAGTTATGTTTCACAATGATTGGGATTCAAAGCCGGTTCCTTACAATGAGATGCTTCTaGCGGTGGCCGTGCCGGTTC +
Preference number: 4 (lower is better)
Translates to: LNCTELCFTMIGIQSRFLTMRCF*RWPCRF
Trigger: GAACCGGCACGGCCACCGGCAGAAGCATCTCATTGT...AAGGAACCGGCTTTGAATCCCAATCATTGTGAAACATAACTCAGTACAGTTTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR GCA 90 bp CAGAGGGAGCCTTGCTTTGTGGAAAGAAACGTGAAGAAACACCAAGAAGATGCTAGGCATTCCATAGGGTaGATAGTAACTTCCACTGGG +
Preference number: 4 (lower is better)
Translates to: QREPCFVERNVKKHQEDARHSIG*IVTSTG
Trigger: CCCAGTGGAAGTTACTATGCACCCTATGGAATGCCT...AGCATCTTCTTGGTGTTTCTTCACGTTTCTTTCCACAAAGCAAGGCTCCCTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR GCA 90 bp TATGATCTGCTTATGATACATCATCCTCTACTAGAATTCTGTCACCACTTGCTTGACCCTCCGATCTTGTaGTGTCTCCACCGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: YDLLMIHHPLLEFCHHLLDPPIL*CLHRCQ
Trigger: CTGGCAGCGGTGGAGACAGCACAAGATCGGAGGGTC...AAGCAAGTGGTGACAGAATTCTAGTAGAGGATGATGTATCATAAGCAGATCATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR CCA 90 bp TCTGCTTATGATACATCATCCTCTACTAGAATTCTGTCACCACTTGCTTATCATGATGCTCTGCCGGGCTaGCGATGCCTCTTGAGCACT +
Preference number: 4 (lower is better)
Translates to: SAYDTSSSTRILSPLAYHDALPG*RCLLST
Trigger: AGTGCTCAAGAGGCATCGCCAGCCCGGCAGAGCATC...ATGATAAGCAAGTGGTGACAGAATTCTAGTAGAGGATGATGTATCATAAGCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR CCA 90 bp CAGAGGGAGCCTTGCTTTGTGGAAAGAAACGTGAAGAAACACCAAGAAGATGCTGTCTCTTCCTTTTCTTaGTGCCAGGAAACTCTCTGC +
Preference number: 4 (lower is better)
Translates to: QREPCFVERNVKKHQEDAVSSFS*CQETLC
Trigger: GCAGAGAGTTTCCTGGCACCAAGAAAAGGAAGAGAC...AGCATCTTCTTGGTGTTTCTTCACGTTTCTTTCCACAAAGCAAGGCTCCCTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR CCA 90 bp TATGATCTGCTTATGATACATCATCCTCTACTAGAATTCTGTCACCACTTGCTTCGGGTGACTGGAAGCTaGAAGGCACGGCTGGAACGT +
Preference number: 4 (lower is better)
Translates to: YDLLMIHHPLLEFCHHLLRVTGS*KARLER
Trigger: ACGTTCCAGCCGTGCCTTCCAGCTTCCAGTCACCCG...AAGCAAGTGGTGACAGAATTCTAGTAGAGGATGATGTATCATAAGCAGATCATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR CCA 90 bp TGCTACGGTATATTACAGTTTGAGTTTCTAGGCACTGTGATGACATTATCTGTAGAAGCCACGGGTGACTaGAAGCTGGAAGGCACGGCT +
Preference number: 4 (lower is better)
Translates to: CYGILQFEFLGTVMTLSVEATGD*KLEGTA
Trigger: AGCCGTGCCTTCCAGCTTCCAGTCACCCGTGGCTTC...TACAGATAATGTCATCACAGTGCCTAGAAACTCAAACTGTAATATACCGTAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR CCA 90 bp TCTGCTTATGATACATCATCCTCTACTAGAATTCTGTCACCACTTGCTTATCATGAACTTGCGTGGAACTaGGGTGGTGGCACTGTCGGC +
Preference number: 4 (lower is better)
Translates to: SAYDTSSSTRILSPLAYHELAWN*GGGTVG
Trigger: GCCGACAGTGCCACCACCCCAGTTCCACGCAAGTTC...ATGATAAGCAAGTGGTGACAGAATTCTAGTAGAGGATGATGTATCATAAGCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR CCA 90 bp TCTGCTTATGATACATCATCCTCTACTAGAATTCTGTCACCACTTGCTTATCATGCCTCCCGAGCCATGTaGATGACAGCCTCGATGGTG +
Preference number: 4 (lower is better)
Translates to: SAYDTSSSTRILSPLAYHASRAM*MTASMV
Trigger: CACCATCGAGGCTGTCATCCACATGGCTCGGGAGGC...ATGATAAGCAAGTGGTGACAGAATTCTAGTAGAGGATGATGTATCATAAGCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR TCA 90 bp CAATCAAATGGTGGATGTCTCTTGAGGTTTAATAAGCACCAGATTTCTCTCTTCCTGGATGAGGAGCCCTaGAGGAATTCCGACTCACTC +
Preference number: 4 (lower is better)
Translates to: QSNGGCLLRFNKHQISLFLDEEP*RNSDSL
Trigger: GAGTGAGTCGGAATTCCTTCAGGGCTCCTCATCCAG...GAAGAGAGAAATCTGGTGCTTATTAAACCTCAAGAGACATCCACCATTTGATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR TCA 90 bp GAGATCCTGTGTTCTGATGTGATAATGCAGTTTCTTAGCTGGTCTCAACTTTCTAATCTCGCAAAGGTGTaGTGGGGAGTTGGCCATCAG +
Preference number: 4 (lower is better)
Translates to: EILCSDVIMQFLSWSQLSNLAKV*WGVGHQ
Trigger: CTGATGGCCAACTCCCCATCACACCTTTGCGAGATT...AGAAAGTTGAGACCAGCTAAGAAACTGCATTATCACATCAGAACACAGGATCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR GCA 90 bp CAATCAAATGGTGGATGTCTCTTGAGGTTTAATAAGCACCAGATTTCTCTCTTCCTGCTTGGTCGGAGGTaGTGTTGTTGTCTGTCCCGA +
Preference number: 4 (lower is better)
Translates to: QSNGGCLLRFNKHQISLFLLGRR*CCCLSR
Trigger: TCGGGACAGACAACAACAGCACCTCCGACCAAGCAG...GAAGAGAGAAATCTGGTGCTTATTAAACCTCAAGAGACATCCACCATTTGATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR GCA 90 bp AGGTTTAGATTCTATAAGCCTTCTGTAGGAAGGTTTAGATTCTATAAGCCTTCTTTCTGCCGGTGGCCGTaGCGGTTCTTTGTGCTGGTG +
Preference number: 4 (lower is better)
Translates to: RFRFYKPSVGRFRFYKPSFCRWP*RFFVLV
Trigger: CACCAGCACAAAGAACCGGCACGGCCACCGGCAGAA...AGAAGGCTTATAGAATCTAAACCTTCCTACAGAAGGCTTATAGAATCTAAACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR GCA 90 bp CCATTGAACATGGCCTCCCACTTCAGACGGCAGCCAAGTTTATACACCGTTCTAATTCGGTCTTCCTTGTaGTTACGCTTATGTTTGTGT +
Preference number: 4 (lower is better)
Translates to: PLNMASHFRRQPSLYTVLIRSSL*LRLCLC
Trigger: ACACAAACATAAGCGTAAGCACAAGGAAGACCGAAT...TAGAACGGTGTATAAACTTGGCTGCCGTCTGAAGTGGGAGGCCATGTTCAATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR CCA 90 bp TATGATCTGCTTATGATACATCATCCTCTACTAGAATTCTGTCACCACTTGCTTGGGAGTTGTGGCTGCTaGGGGATGGTACCACACTTC +
Preference number: 4 (lower is better)
Translates to: YDLLMIHHPLLEFCHHLLGSCGC*GMVPHF
Trigger: GAAGTGTGGTACCATCCCCCAGCAGCCACAACTCCC...AAGCAAGTGGTGACAGAATTCTAGTAGAGGATGATGTATCATAAGCAGATCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR CCA 90 bp AGACAGATATCCAGGAAGTTCCTTCCTTGGTTGATATGTGCTTCTATGACTGTTAAACTCTCTGCTGATTaGGCTGACGGGGCTAGTGGA +
Preference number: 4 (lower is better)
Translates to: RQISRKFLPWLICASMTVKLSAD*ADGASG
Trigger: TCCACTAGCCCCGTCAGCCCAATCAGCAGAGAGTTT...AACAGTCATAGAAGCACATATCAACCAAGGAAGGAACTTCCTGGATATCTGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR CCA 90 bp AGTATAAAAATAACCTGGCTGACACTTGGGTCGACATATCCATCGGCTGCTCTGTTAACTCTGAAAAATTaGTTTCAGTGCTGGCGGGGC +
Preference number: 4 (lower is better)
Translates to: SIKITWLTLGSTYPSAALLTLKN*FQCWRG
Trigger: GCCCCGCCAGCACTGAAACCAATTTTTCAGAGTTAA...CAGAGCAGCCGATGGATATGTCGACCCAAGTGTCAGCCAGGTTATTTTTATACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR CCA 90 bp CGCGTTAAGTGGCAGATCCAGTGTATCTCTACTGAATCTTTTTACTCTTTTGGAACGGTTCCCTGCAAGTaGACGCCATGCTTGGCTTTA +
Preference number: 4 (lower is better)
Translates to: RVKWQIQCISTESFYSFGTVPCK*TPCLAL
Trigger: TAAAGCCAAGCATGGCGTCCACTTGCAGGGAACCGT...TCCAAAAGAGTAAAAAGATTCAGTAGAGATACACTGGATCTGCCACTTAACGCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR CCA 90 bp TGCTACGGTATATTACAGTTTGAGTTTCTAGGCACTGTGATGACATTATCTGTATTCTTGGAAACCTTGTaGCTGGCCTCCCCGTGCTGG +
Preference number: 4 (lower is better)
Translates to: CYGILQFEFLGTVMTLSVFLETL*LASPCW
Trigger: CCAGCACGGGGAGGCCAGCCACAAGGTTTCCAAGAA...TACAGATAATGTCATCACAGTGCCTAGAAACTCAAACTGTAATATACCGTAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR CCA 90 bp TATGATCTGCTTATGATACATCATCCTCTACTAGAATTCTGTCACCACTTGCTTGCCTGTGTCCAGTGCTaGGCGTCAGAAAGTGACAGC +
Preference number: 4 (lower is better)
Translates to: YDLLMIHHPLLEFCHHLLACVQC*ASESDS
Trigger: GCTGTCACTTTCTGACGCCCAGCACTGGACACAGGC...AAGCAAGTGGTGACAGAATTCTAGTAGAGGATGATGTATCATAAGCAGATCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR CCA 90 bp GAGATCCTGTGTTCTGATGTGATAATGCAGTTTCTTAGCTGGTCTCAACTTTCTTTCCGCACTTCGCATTaGATGGCTTCGATCTCCCGT +
Preference number: 4 (lower is better)
Translates to: EILCSDVIMQFLSWSQLSFRTSH*MASISR
Trigger: ACGGGAGATCGAAGCCATCCAATGCGAAGTGCGGAA...AGAAAGTTGAGACCAGCTAAGAAACTGCATTATCACATCAGAACACAGGATCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR CCA 90 bp CAGAGGGAGCCTTGCTTTGTGGAAAGAAACGTGAAGAAACACCAAGAAGATGCTAGGATTTTGTTCACGTaGTCCAGGTTCTTCTTGGTG +
Preference number: 4 (lower is better)
Translates to: QREPCFVERNVKKHQEDARILFT*SRFFLV
Trigger: CACCAAGAAGAACCTGGACCACGTGAACAAAATCCT...AGCATCTTCTTGGTGTTTCTTCACGTTTCTTTCCACAAAGCAAGGCTCCCTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR CCA 90 bp GAGTTACTCAGACATGGCTTGGGAGTGACAGATTGGAAATGGCTGTTTAGATTTGTCTCTGCAGCCGCTTaGCCTTCAGGATTTTGTTCA +
Preference number: 4 (lower is better)
Translates to: ELLRHGLGVTDWKWLFRFVSAAA*PSGFCS
Trigger: TGAACAAAATCCTGAAGGCCAAGCGGCTGCAGAGAC...AAATCTAAACAGCCATTTCCAATCTGTCACTCCCAAGCCATGTCTGAGTAACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
3UTR CAA 72 bp CATTTCAGCTCCCGCCACTCCCCCTCTATGCTACAGTaGGCATTTAAAGGCTTTGGAAATATCTGTAAAGAC +
Preference number: 4 (lower is better)
Translates to: HFSSRHSPSMLQ*AFKGFGNICKD
Trigger: GTCTTTACAGATATTTCCAAAGCCTTTAAATGCCAACTGTAGCATAGAGGGGGAGTGGCGGGAGCTGAAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR TCA 90 bp CTAAACTGTACTGAGTTATGTTTCACAATGATTGGGATTCAAAGCCGGTTCCTTCGATCTCCCGTCTCTTaGATCTCTTCTTCAGGGAGG +
Preference number: 4 (lower is better)
Translates to: LNCTELCFTMIGIQSRFLRSPVS*ISSSGR
Trigger: CCTCCCTGAAGAAGAGATTCAAGAGACGGGAGATCG...AAGGAACCGGCTTTGAATCCCAATCATTGTGAAACATAACTCAGTACAGTTTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR TCA 90 bp TATGATCTGCTTATGATACATCATCCTCTACTAGAATTCTGTCACCACTTGCTTGGCCTCGCCTCTTCTTaGCAAAGTTGTTGCCCGTCT +
Preference number: 4 (lower is better)
Translates to: YDLLMIHHPLLEFCHHLLGLASS*QSCCPS
Trigger: AGACGGGCAACAACTTTGTCAAGAAGAGGCGAGGCC...AAGCAAGTGGTGACAGAATTCTAGTAGAGGATGATGTATCATAAGCAGATCATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR GCA 90 bp CGCGTTAAGTGGCAGATCCAGTGTATCTCTACTGAATCTTTTTACTCTTTTGGATTTACTCTGGGCCTTTaGAAAGGAAGCCACGGGTTC +
Preference number: 4 (lower is better)
Translates to: RVKWQIQCISTESFYSFGFTLGL*KGSHGF
Trigger: GAACCCGTGGCTTCCTTTGCAAAGGCCCAGAGTAAA...TCCAAAAGAGTAAAAAGATTCAGTAGAGATACACTGGATCTGCCACTTAACGCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR GCA 90 bp CTAAACTGTACTGAGTTATGTTTCACAATGATTGGGATTCAAAGCCGGTTCCTTGTCTCTCCTTGTGTTTaGTCTTCTCGCTCACCAGCG +
Preference number: 4 (lower is better)
Translates to: LNCTELCFTMIGIQSRFLVSPCV*SSRSPA
Trigger: CGCTGGTGAGCGAGAAGAGCAAACACAAGGAGAGAC...AAGGAACCGGCTTTGAATCCCAATCATTGTGAAACATAACTCAGTACAGTTTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR GCA 90 bp AGACAGATATCCAGGAAGTTCCTTCCTTGGTTGATATGTGCTTCTATGACTGTTACTCCACAGGCTCACTaGTCAAGTCACCTTTGTCCT +
Preference number: 4 (lower is better)
Translates to: RQISRKFLPWLICASMTVTPQAH*SSHLCP
Trigger: AGGACAAAGGTGACTTGAGCAGTGAGCCTGTGGAGT...AACAGTCATAGAAGCACATATCAACCAAGGAAGGAACTTCCTGGATATCTGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR GCA 90 bp GAGATCCTGTGTTCTGATGTGATAATGCAGTTTCTTAGCTGGTCTCAACTTTCTCTCGCTCTTACTGTGTaGTGCTGTCTGGTCCACTTT +
Preference number: 4 (lower is better)
Translates to: EILCSDVIMQFLSWSQLSLALTV*CCLVHF
Trigger: AAAGTGGACCAGACAGCAGCACACAGTAAGAGCGAG...AGAAAGTTGAGACCAGCTAAGAAACTGCATTATCACATCAGAACACAGGATCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR CCA 90 bp CAATCAAATGGTGGATGTCTCTTGAGGTTTAATAAGCACCAGATTTCTCTCTTCGTACGGGACACCTTCTaGTCCCCAGACTGCTTTATG +
Preference number: 4 (lower is better)
Translates to: QSNGGCLLRFNKHQISLFVRDTF*SPDCFM
Trigger: CATAAAGCAGTCTGGGGACCAGAAGGTGTCCCGTAC...GAAGAGAGAAATCTGGTGCTTATTAAACCTCAAGAGACATCCACCATTTGATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR CCA 90 bp TGCTACGGTATATTACAGTTTGAGTTTCTAGGCACTGTGATGACATTATCTGTAGGTCTTTGCTACTGCTaGACAACTGACTCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: CYGILQFEFLGTVMTLSVGLCYC*TTDSRP
Trigger: GGGCCTGGAGTCAGTTGTCCAGCAGTAGCAAAGACC...TACAGATAATGTCATCACAGTGCCTAGAAACTCAAACTGTAATATACCGTAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR CCA 90 bp TATGATCTGCTTATGATACATCATCCTCTACTAGAATTCTGTCACCACTTGCTTGAGAGTGGGTGGCTCTaGGAGGTCCTTTGTACTTCC +
Preference number: 4 (lower is better)
Translates to: YDLLMIHHPLLEFCHHLLESGWL*EVLCTS
Trigger: GGAAGTACAAAGGACCTCCCAGAGCCACCCACTCTC...AAGCAAGTGGTGACAGAATTCTAGTAGAGGATGATGTATCATAAGCAGATCATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR CCA 90 bp CTAAACTGTACTGAGTTATGTTTCACAATGATTGGGATTCAAAGCCGGTTCCTTGTACAGAGGGCTGGATaGGGTAATGGGGTAAGCAGA +
Preference number: 4 (lower is better)
Translates to: LNCTELCFTMIGIQSRFLVQRAG*GNGVSR
Trigger: TCTGCTTACCCCATTACCCCATCCAGCCCTCTGTAC...AAGGAACCGGCTTTGAATCCCAATCATTGTGAAACATAACTCAGTACAGTTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR CCA 90 bp CTAAACTGTACTGAGTTATGTTTCACAATGATTGGGATTCAAAGCCGGTTCCTTAATTGGTTTCAGTGCTaGCGGGGCTCAGGTTGCCAT +
Preference number: 4 (lower is better)
Translates to: LNCTELCFTMIGIQSRFLNWFQC*RGSGCH
Trigger: ATGGCAACCTGAGCCCCGCCAGCACTGAAACCAATT...AAGGAACCGGCTTTGAATCCCAATCATTGTGAAACATAACTCAGTACAGTTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR CCA 90 bp AGACAGATATCCAGGAAGTTCCTTCCTTGGTTGATATGTGCTTCTATGACTGTTAGCTCTGCCAGAAACTaGAGATCATCGCGGTTTTGC +
Preference number: 4 (lower is better)
Translates to: RQISRKFLPWLICASMTVSSARN*RSSRFC
Trigger: GCAAAACCGCGATGATCTCCAGTTTCTGGCAGAGCT...AACAGTCATAGAAGCACATATCAACCAAGGAAGGAACTTCCTGGATATCTGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR CCA 90 bp TCTGCTTATGATACATCATCCTCTACTAGAATTCTGTCACCACTTGCTTATCATGGCTGGAGAAGCCTGTaGCTTTGCCTGCAAAGAGAC +
Preference number: 4 (lower is better)
Translates to: SAYDTSSSTRILSPLAYHGWRSL*LCLQRD
Trigger: GTCTCTTTGCAGGCAAAGCCACAGGCTTCTCCAGCC...ATGATAAGCAAGTGGTGACAGAATTCTAGTAGAGGATGATGTATCATAAGCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR CCA 90 bp TGCTACGGTATATTACAGTTTGAGTTTCTAGGCACTGTGATGACATTATCTGTATCTTCAGGGAGGAGCTaGCTGCATCCGATGTTGCTG +
Preference number: 4 (lower is better)
Translates to: CYGILQFEFLGTVMTLSVSSGRS*LHPMLL
Trigger: CAGCAACATCGGATGCAGCCAGCTCCTCCCTGAAGA...TACAGATAATGTCATCACAGTGCCTAGAAACTCAAACTGTAATATACCGTAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR TCA 90 bp TCTGCTTATGATACATCATCCTCTACTAGAATTCTGTCACCACTTGCTTATCATATCCACATCTCGTCCTaGGCCCAATTCATCCTCCTC +
Preference number: 4 (lower is better)
Translates to: SAYDTSSSTRILSPLAYHIHISS*AQFILL
Trigger: GAGGAGGATGAATTGGGCTCAGGACGAGATGTGGAT...ATGATAAGCAAGTGGTGACAGAATTCTAGTAGAGGATGATGTATCATAAGCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR TCA 90 bp CTAAACTGTACTGAGTTATGTTTCACAATGATTGGGATTCAAAGCCGGTTCCTTGTCATACTGAAGTGTTaGGTGTTTCTGGGGCCTCTC +
Preference number: 4 (lower is better)
Translates to: LNCTELCFTMIGIQSRFLVILKC*VFLGPL
Trigger: GAGAGGCCCCAGAAACACTCAACACTTCAGTATGAC...AAGGAACCGGCTTTGAATCCCAATCATTGTGAAACATAACTCAGTACAGTTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR GCA 90 bp TATGATCTGCTTATGATACATCATCCTCTACTAGAATTCTGTCACCACTTGCTTCTCTTTGCCGGCAGCTaGTTAACATTTCCCTGGGCT +
Preference number: 4 (lower is better)
Translates to: YDLLMIHHPLLEFCHHLLLFAGS*LTFPWA
Trigger: AGCCCAGGGAAATGTTAAGCAGCTGCCGGCAAAGAG...AAGCAAGTGGTGACAGAATTCTAGTAGAGGATGATGTATCATAAGCAGATCATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR GCA 90 bp TCTGCTTATGATACATCATCCTCTACTAGAATTCTGTCACCACTTGCTTATCATCCTTTAGGGCCACGCTaGTGGAACAGGACAAGATCT +
Preference number: 4 (lower is better)
Translates to: SAYDTSSSTRILSPLAYHPLGPR*WNRTRS
Trigger: AGATCTTGTCCTGTTCCAGCAGCGTGGCCCTAAAGG...ATGATAAGCAAGTGGTGACAGAATTCTAGTAGAGGATGATGTATCATAAGCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR GCA 90 bp TATGATCTGCTTATGATACATCATCCTCTACTAGAATTCTGTCACCACTTGCTTCTGTCCTTGGCTTCCTaGCCCTCTTCTTGCCTATGT +
Preference number: 4 (lower is better)
Translates to: YDLLMIHHPLLEFCHHLLLSLAS*PSSCLC
Trigger: ACATAGGCAAGAAGAGGGGCAGGAAGCCAAGGACAG...AAGCAAGTGGTGACAGAATTCTAGTAGAGGATGATGTATCATAAGCAGATCATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR GCA 90 bp CTAAACTGTACTGAGTTATGTTTCACAATGATTGGGATTCAAAGCCGGTTCCTTAGATCATCGCGGTTTTaGAGGCTCTTCCGTTTCCTC +
Preference number: 4 (lower is better)
Translates to: LNCTELCFTMIGIQSRFLRSSRF*RLFRFL
Trigger: GAGGAAACGGAAGAGCCTGCAAAACCGCGATGATCT...AAGGAACCGGCTTTGAATCCCAATCATTGTGAAACATAACTCAGTACAGTTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR GCA 90 bp GAGATCCTGTGTTCTGATGTGATAATGCAGTTTCTTAGCTGGTCTCAACTTTCTGGTGTCATTGGTTTTTaGAGGCCTACCACGCTTCTT +
Preference number: 4 (lower is better)
Translates to: EILCSDVIMQFLSWSQLSGVIGF*RPTTLL
Trigger: AAGAAGCGTGGTAGGCCTGCAAAAACCAATGACACC...AGAAAGTTGAGACCAGCTAAGAAACTGCATTATCACATCAGAACACAGGATCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR GCA 90 bp AGGTTTAGATTCTATAAGCCTTCTGTAGGAAGGTTTAGATTCTATAAGCCTTCTATGCCTACGGTTCCCTaGAAGTGGACGCCATGCTTG +
Preference number: 4 (lower is better)
Translates to: RFRFYKPSVGRFRFYKPSMPTVP*KWTPCL
Trigger: CAAGCATGGCGTCCACTTGCAGGGAACCGTAGGCAT...AGAAGGCTTATAGAATCTAAACCTTCCTACAGAAGGCTTATAGAATCTAAACCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR GCA 90 bp CAATCAAATGGTGGATGTCTCTTGAGGTTTAATAAGCACCAGATTTCTCTCTTCAGAAGCCTGTGGCTTTaGCTGCAAAGAGACCACTCA +
Preference number: 4 (lower is better)
Translates to: QSNGGCLLRFNKHQISLFRSLWL*LQRDHS
Trigger: TGAGTGGTCTCTTTGCAGGCAAAGCCACAGGCTTCT...GAAGAGAGAAATCTGGTGCTTATTAAACCTCAAGAGACATCCACCATTTGATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR GCA 90 bp TGCTACGGTATATTACAGTTTGAGTTTCTAGGCACTGTGATGACATTATCTGTAGTCTTTGATTGTCTCTaGAGCCGCTTGGCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: CYGILQFEFLGTVMTLSVVFDCL*SRLAFR
Trigger: CCTGAAGGCCAAGCGGCTGCAGAGACAATCAAAGAC...TACAGATAATGTCATCACAGTGCCTAGAAACTCAAACTGTAATATACCGTAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR CCA 90 bp CGCGTTAAGTGGCAGATCCAGTGTATCTCTACTGAATCTTTTTACTCTTTTGGAATCTTGATCTCCCAATaGCTGGAGTCCATTGCACTC +
Preference number: 4 (lower is better)
Translates to: RVKWQIQCISTESFYSFGILISQ*LESIAL
Trigger: GAGTGCAATGGACTCCAGCCATTGGGAGATCAAGAT...TCCAAAAGAGTAAAAAGATTCAGTAGAGATACACTGGATCTGCCACTTAACGCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
3UTR CAA 72 bp TGGCTTACAAACAAGCCAGCTGGTAAATTTTCAGCTTaGCTTCCCCTTGGAATGTTTGCTAATGGTGTTTCC +
Preference number: 4 (lower is better)
Translates to: WLTNKPAGKFSA*LPLGMFANGVS
Trigger: GGAAACACCATTAGCAAACATTCCAAGGGGAAGCAAAGCTGAAAATTTACCAGCTGGCTTGTTTGTAAGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
3UTR CAA 72 bp AGAAGGCAGTGTTGTGTGGATAAGAACCTCCATACTTaGAATCAAGAGCTGGGTTCTCTTTCTGGCTGTAAA +
Preference number: 4 (lower is better)
Translates to: RRQCCVDKNLHT*NQELGSLSGCK
Trigger: TTTACAGCCAGAAAGAGAACCCAGCTCTTGATTCAAAGTATGGAGGTTCTTATCCACACAACACTGCCTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR TCA 90 bp TGCTACGGTATATTACAGTTTGAGTTTCTAGGCACTGTGATGACATTATCTGTACTTTCTGGGCACTCTTaGCCCAATCCAGATCTGAGT +
Preference number: 4 (lower is better)
Translates to: CYGILQFEFLGTVMTLSVLSGHS*PNPDLS
Trigger: ACTCAGATCTGGATTGGGTCAAGAGTGCCCAGAAAG...TACAGATAATGTCATCACAGTGCCTAGAAACTCAAACTGTAATATACCGTAGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR TCA 90 bp CAATCAAATGGTGGATGTCTCTTGAGGTTTAATAAGCACCAGATTTCTCTCTTCCCTTGCGATTCATCTTaGAGGCTTGGATGTCCTTCT +
Preference number: 4 (lower is better)
Translates to: QSNGGCLLRFNKHQISLFPCDSS*RLGCPS
Trigger: AGAAGGACATCCAAGCCTTCAAGATGAATCGCAAGG...GAAGAGAGAAATCTGGTGCTTATTAAACCTCAAGAGACATCCACCATTTGATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR GCA 90 bp CTAAACTGTACTGAGTTATGTTTCACAATGATTGGGATTCAAAGCCGGTTCCTTGAGTTCTTCCAGCTCTaGCAGAAACTGGAGATCATC +
Preference number: 4 (lower is better)
Translates to: LNCTELCFTMIGIQSRFLEFFQL*QKLEII
Trigger: GATGATCTCCAGTTTCTGGCAGAGCTGGAAGAACTC...AAGGAACCGGCTTTGAATCCCAATCATTGTGAAACATAACTCAGTACAGTTTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR GCA 90 bp AGGTTTAGATTCTATAAGCCTTCTGTAGGAAGGTTTAGATTCTATAAGCCTTCTTTAGCCTGTGTCCAGTaGTGGGCGTCAGAAAGTGAC +
Preference number: 4 (lower is better)
Translates to: RFRFYKPSVGRFRFYKPSLACVQ*WASESD
Trigger: GTCACTTTCTGACGCCCAGCACTGGACACAGGCTAA...AGAAGGCTTATAGAATCTAAACCTTCCTACAGAAGGCTTATAGAATCTAAACCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR GCA 90 bp AGGTTTAGATTCTATAAGCCTTCTGTAGGAAGGTTTAGATTCTATAAGCCTTCTGCTTCTGGCCTCTCTTaGTGGGTAGGTCAATGCACT +
Preference number: 4 (lower is better)
Translates to: RFRFYKPSVGRFRFYKPSASGLS*WVGQCT
Trigger: AGTGCATTGACCTACCCAGCAAGAGAGGCCAGAAGC...AGAAGGCTTATAGAATCTAAACCTTCCTACAGAAGGCTTATAGAATCTAAACCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR CCA 90 bp TCTGCTTATGATACATCATCCTCTACTAGAATTCTGTCACCACTTGCTTATCATAGTGTTGAGTGTTTCTaGGGCCTCTCGTATGCCTGT +
Preference number: 4 (lower is better)
Translates to: SAYDTSSSTRILSPLAYHSVECF*GLSYAC
Trigger: ACAGGCATACGAGAGGCCCCAGAAACACTCAACACT...ATGATAAGCAAGTGGTGACAGAATTCTAGTAGAGGATGATGTATCATAAGCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR CCA 90 bp TATGATCTGCTTATGATACATCATCCTCTACTAGAATTCTGTCACCACTTGCTTTTAGGGCCACGCTGCTaGAACAGGACAAGATCTGAT +
Preference number: 4 (lower is better)
Translates to: YDLLMIHHPLLEFCHHLLLGPRC*NRTRSD
Trigger: ATCAGATCTTGTCCTGTTCCAGCAGCGTGGCCCTAA...AAGCAAGTGGTGACAGAATTCTAGTAGAGGATGATGTATCATAAGCAGATCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR CCA 90 bp CTAAACTGTACTGAGTTATGTTTCACAATGATTGGGATTCAAAGCCGGTTCCTTTTCTTGAGGCTTTCGTaGGCCAGAAAAGTGTCCACA +
Preference number: 4 (lower is better)
Translates to: LNCTELCFTMIGIQSRFLFLRLS*ARKVST
Trigger: TGTGGACACTTTTCTGGCCCACGAAAGCCTCAAGAA...AAGGAACCGGCTTTGAATCCCAATCATTGTGAAACATAACTCAGTACAGTTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR CCA 90 bp TGCTACGGTATATTACAGTTTGAGTTTCTAGGCACTGTGATGACATTATCTGTATGGTCCACTTTTAAGTaGGGACTTGGCATCCCTGGA +
Preference number: 4 (lower is better)
Translates to: CYGILQFEFLGTVMTLSVWSTFK*GLGIPG
Trigger: TCCAGGGATGCCAAGTCCCCACTTAAAAGTGGACCA...TACAGATAATGTCATCACAGTGCCTAGAAACTCAAACTGTAATATACCGTAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
3UTR CAA 72 bp TTTAACAACATCTATGGCAGTGGGTTAAGTCCAAACTaGGGCTGTGGAATGGATGATAGACGGAATATCTGT +
Preference number: 4 (lower is better)
Translates to: FNNIYGSGLSPN*GCGMDDRRNIC
Trigger: ACAGATATTCCGTCTATCATCCATTCCACAGCCCAAGTTTGGACTTAACCCACTGCCATAGATGTTGTTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR GCA 90 bp CTAAACTGTACTGAGTTATGTTTCACAATGATTGGGATTCAAAGCCGGTTCCTTTTCTGGTCCCCAGACTaGTTTATGGTGATCTTGATC +
Preference number: 4 (lower is better)
Translates to: LNCTELCFTMIGIQSRFLFWSPD*FMVILI
Trigger: GATCAAGATCACCATAAAGCAGTCTGGGGACCAGAA...AAGGAACCGGCTTTGAATCCCAATCATTGTGAAACATAACTCAGTACAGTTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR GCA 90 bp AGGTTTAGATTCTATAAGCCTTCTGTAGGAAGGTTTAGATTCTATAAGCCTTCTGCAGCAAACTTGGGGTaGTGGATCTCAGACAGCTTT +
Preference number: 4 (lower is better)
Translates to: RFRFYKPSVGRFRFYKPSAANLG*WISDSF
Trigger: AAAGCTGTCTGAGATCCAGCACCCCAAGTTTGCTGC...AGAAGGCTTATAGAATCTAAACCTTCCTACAGAAGGCTTATAGAATCTAAACCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR GCA 90 bp CAATCAAATGGTGGATGTCTCTTGAGGTTTAATAAGCACCAGATTTCTCTCTTCTTCCGTTTCCTCTTGTaGTTTGGCTTCTTGAGGCTT +
Preference number: 4 (lower is better)
Translates to: QSNGGCLLRFNKHQISLFFRFLL*FGFLRL
Trigger: AAGCCTCAAGAAGCCAAAGCACAAGAGGAAACGGAA...GAAGAGAGAAATCTGGTGCTTATTAAACCTCAAGAGACATCCACCATTTGATTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR CCA 90 bp AGGTTTAGATTCTATAAGCCTTCTGTAGGAAGGTTTAGATTCTATAAGCCTTCTGGATGGAATGGCCTCTaGGTTGTCAAGGGAACAGAA +
Preference number: 4 (lower is better)
Translates to: RFRFYKPSVGRFRFYKPSGWNGL*VVKGTE
Trigger: TTCTGTTCCCTTGACAACCCAGAGGCCATTCCATCC...AGAAGGCTTATAGAATCTAAACCTTCCTACAGAAGGCTTATAGAATCTAAACCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR CCA 90 bp AGGTTTAGATTCTATAAGCCTTCTGTAGGAAGGTTTAGATTCTATAAGCCTTCTACTGTCCACTGCAGTTaGCTTCTTCCTGGCCATCAT +
Preference number: 4 (lower is better)
Translates to: RFRFYKPSVGRFRFYKPSTVHCS*LLPGHH
Trigger: ATGATGGCCAGGAAGAAGCCAACTGCAGTGGACAGT...AGAAGGCTTATAGAATCTAAACCTTCCTACAGAAGGCTTATAGAATCTAAACCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR CCA 90 bp CTAAACTGTACTGAGTTATGTTTCACAATGATTGGGATTCAAAGCCGGTTCCTTCCAGGTTCTTCTTGGTaGACAGAAGCTTGGTGTAAT +
Preference number: 4 (lower is better)
Translates to: LNCTELCFTMIGIQSRFLPGSSW*TEAWCN
Trigger: ATTACACCAAGCTTCTGTCCACCAAGAAGAACCTGG...AAGGAACCGGCTTTGAATCCCAATCATTGTGAAACATAACTCAGTACAGTTTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR TCA 90 bp GAGATCCTGTGTTCTGATGTGATAATGCAGTTTCTTAGCTGGTCTCAACTTTCTGTTCATCATAGGCATTaGTGTGTAAGGCATTCCATA +
Preference number: 4 (lower is better)
Translates to: EILCSDVIMQFLSWSQLSVHHRH*CVRHSI
Trigger: TATGGAATGCCTTACACATCAATGCCTATGATGAAC...AGAAAGTTGAGACCAGCTAAGAAACTGCATTATCACATCAGAACACAGGATCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR CCA 90 bp AGGTTTAGATTCTATAAGCCTTCTGTAGGAAGGTTTAGATTCTATAAGCCTTCTGCAATTCTGAGTAGCTaGTCCACTGTCAGAGTTGGA +
Preference number: 4 (lower is better)
Translates to: RFRFYKPSVGRFRFYKPSAILSS*STVRVG
Trigger: TCCAACTCTGACAGTGGACCAGCTACTCAGAATTGC...AGAAGGCTTATAGAATCTAAACCTTCCTACAGAAGGCTTATAGAATCTAAACCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR CCA 90 bp TGCTACGGTATATTACAGTTTGAGTTTCTAGGCACTGTGATGACATTATCTGTACCTCTTATGGTTGCTTaGATCCAGAGAAGGTGTCTT +
Preference number: 4 (lower is better)
Translates to: CYGILQFEFLGTVMTLSVPLMVA*IQRRCL
Trigger: AAGACACCTTCTCTGGATCCAAGCAACCATAAGAGG...TACAGATAATGTCATCACAGTGCCTAGAAACTCAAACTGTAATATACCGTAGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR CCA 90 bp TGCTACGGTATATTACAGTTTGAGTTTCTAGGCACTGTGATGACATTATCTGTATTTTTGCAGCAAACTTaGGGTGCTGGATCTCAGACA +
Preference number: 4 (lower is better)
Translates to: CYGILQFEFLGTVMTLSVFLQQT*GAGSQT
Trigger: TGTCTGAGATCCAGCACCCCAAGTTTGCTGCAAAAA...TACAGATAATGTCATCACAGTGCCTAGAAACTCAAACTGTAATATACCGTAGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR CCA 90 bp AGGTTTAGATTCTATAAGCCTTCTGTAGGAAGGTTTAGATTCTATAAGCCTTCTCAGAGGTTGCTTCTTTaGTCGTCCCCGCTTCTTTTT +
Preference number: 4 (lower is better)
Translates to: RFRFYKPSVGRFRFYKPSQRLLL*SSPLLF
Trigger: AAAAAGAAGCGGGGACGACCAAAGAAGCAACCTCTG...AGAAGGCTTATAGAATCTAAACCTTCCTACAGAAGGCTTATAGAATCTAAACCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR GCA 90 bp TCTGCTTATGATACATCATCCTCTACTAGAATTCTGTCACCACTTGCTTATCATTTCTGTGGTTTCAAATaGTTTCTGGGCACTCTTGAC +
Preference number: 4 (lower is better)
Translates to: SAYDTSSSTRILSPLAYHFCGFK*FLGTLD
Trigger: GTCAAGAGTGCCCAGAAAGCATTTGAAACCACAGAA...ATGATAAGCAAGTGGTGACAGAATTCTAGTAGAGGATGATGTATCATAAGCAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR GCA 90 bp TGCTACGGTATATTACAGTTTGAGTTTCTAGGCACTGTGATGACATTATCTGTATTTTCCTCTTATGGTTaGTTGGATCCAGAGAAGGTG +
Preference number: 4 (lower is better)
Translates to: CYGILQFEFLGTVMTLSVFSSYG*LDPEKV
Trigger: CACCTTCTCTGGATCCAAGCAACCATAAGAGGAAAA...TACAGATAATGTCATCACAGTGCCTAGAAACTCAAACTGTAATATACCGTAGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR CCA 90 bp TGCTACGGTATATTACAGTTTGAGTTTCTAGGCACTGTGATGACATTATCTGTAAAGGCACCTTTGTCATaGTGTCATTGGTTTTTGCAG +
Preference number: 4 (lower is better)
Translates to: CYGILQFEFLGTVMTLSVKAPLS*CHWFLQ
Trigger: CTGCAAAAACCAATGACACCATGACAAAGGTGCCTT...TACAGATAATGTCATCACAGTGCCTAGAAACTCAAACTGTAATATACCGTAGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
3UTR CAA 72 bp ACAAGCCAGCTGGTAAATTTTCAGCTTTGCTTCCCCTaGGAATGTTTGCTAATGGTGTTTCCTATTTATTTA +
Preference number: 4 (lower is better)
Translates to: TSQLVNFQLCFP*ECLLMVFPIYL
Trigger: TAAATAAATAGGAAACACCATTAGCAAACATTCCAAGGGGAAGCAAAGCTGAAAATTTACCAGCTGGCTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR GCA 90 bp TGCTACGGTATATTACAGTTTGAGTTTCTAGGCACTGTGATGACATTATCTGTAACAGCTTTAATAGACTaGCTCTTTTTCCTCTTATGG +
Preference number: 4 (lower is better)
Translates to: CYGILQFEFLGTVMTLSVTALID*LFFLLW
Trigger: CCATAAGAGGAAAAAGAGGCAGTCTATTAAAGCTGT...TACAGATAATGTCATCACAGTGCCTAGAAACTCAAACTGTAATATACCGTAGCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR GCA 90 bp TGCTACGGTATATTACAGTTTGAGTTTCTAGGCACTGTGATGACATTATCTGTATTGCTGACATTAATCTaGTTTCCCAGTTTACTTTCG +
Preference number: 4 (lower is better)
Translates to: CYGILQFEFLGTVMTLSVLLTLI*FPSLLS
Trigger: CGAAAGTAAACTGGGAAAGCAGATTAATGTCAGCAA...TACAGATAATGTCATCACAGTGCCTAGAAACTCAAACTGTAATATACCGTAGCA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
3UTR CAA 72 bp ATGATACATCATCCTCTACTAGAATTCTGTCACCACTaGCTTATCATATTTATAGATACAGCAATGTGCAGA +
Preference number: 4 (lower is better)
Translates to: MIHHPLLEFCHH*LIIFIDTAMCR
Trigger: TCTGCACATTGCTGTATCTATAAATATGATAAGCAAGTGGTGACAGAATTCTAGTAGAGGATGATGTATCAT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS TCA 90 bp GGGGCGGCGGCGGGGGCAGCGGCGGCGCCTCCCGAGCCATGTGGATaGCAGCCTCGATGGTGGCCATCACTGCATCCTGGCCCGAGGCCG +
Preference number: 5 (lower is better)
Translates to: GAAAGAAAAPPEPCG*QPRWWPSLHPGPRP
Trigger: CGGCCTCGGGCCAGGATGCAGTGATGGCCACCATCGAGGCTGTCATCCACATGGCTCGGGAGGCGCCGCCGCTGCCCCCGCCGCCGCCCC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS CCA 90 bp GGTGGGGGCGGCGGCGGGGGCAGCGGCGGCGCCTCCCGAGCCATGTaGATGACAGCCTCGATGGTGGCCATCACTGCATCCTGGCCCGAG +
Preference number: 5 (lower is better)
Translates to: GGGGGGGSGGASRAM*MTASMVAITASWPE
Trigger: CTCGGGCCAGGATGCAGTGATGGCCACCATCGAGGCTGTCATCCACATGGCTCGGGAGGCGCCGCCGCTGCCCCCGCCGCCGCCCCCACC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR CAA 90 bp TCCTGCCCACCCGCTGTAGAGAGGGGCGGGGTGTCCCTGTGGCTGGGCATCAGCGGCCGTGCCGGTTCTTaGTGCTGGTGTCGGATGGAA +
Preference number: 5 (lower is better)
Translates to: SCPPAVERGGVSLWLGISGRAGS*CWCRME
Trigger: TTCCATCCGACACCAGCACAAAGAACCGGCACGGCC...GCTGATGCCCAGCCACAGGGACACCCCGCCCCTCTCTACAGCGGGTGGGCAGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS CCA 90 bp CGAGCCATGTGGATGACAGCCTCGATGGTGGCCATCACTGCATCCTaGCCCGAGGCCGGTTCCAGCGCTAGGGGACTCAGGCTGGGCTTC +
Preference number: 5 (lower is better)
Translates to: RAMWMTASMVAITAS*PEAGSSARGLRLGF
Trigger: GAAGCCCAGCCTGAGTCCCCTAGCGCTGGAACCGGCCTCGGGCCAGGATGCAGTGATGGCCACCATCGAGGCTGTCATCCACATGGCTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR CAA 90 bp TCCTGCCCACCCGCTGTAGAGAGGGGCGGGGTGTCCCTGTGGCTGGGCATCAGCACAGGCCTGGGGTGCTaGATGGCTGTTTTGGGTTCC +
Preference number: 5 (lower is better)
Translates to: SCPPAVERGGVSLWLGISTGLGC*MAVLGS
Trigger: GGAACCCAAAACAGCCATCAAGCACCCCAGGCCTGT...GCTGATGCCCAGCCACAGGGACACCCCGCCCCTCTCTACAGCGGGTGGGCAGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR CAA 90 bp TCCTGCCCACCCGCTGTAGAGAGGGGCGGGGTGTCCCTGTGGCTGGGCATCAGCCTTCCGCACTTCGCATaGGATGGCTTCGATCTCCCG +
Preference number: 5 (lower is better)
Translates to: SCPPAVERGGVSLWLGISLPHFA*DGFDLP
Trigger: CGGGAGATCGAAGCCATCCAATGCGAAGTGCGGAAG...GCTGATGCCCAGCCACAGGGACACCCCGCCCCTCTCTACAGCGGGTGGGCAGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS CCA 90 bp GCCACGGGTGACTGGAAGCTGGAAGGCACGGCTGGAACGTCCGGCTaGCTAGACACAGGCCTGGGGTGCTTGATGGCTGTTTTGGGTTCC +
Preference number: 5 (lower is better)
Translates to: ATGDWKLEGTAGTSG*LDTGLGCLMAVLGS
Trigger: GGAACCCAAAACAGCCATCAAGCACCCCAGGCCTGTGTCTAGCCAGCCGGACGTTCCAGCCGTGCCTTCCAGCTTCCAGTCACCCGTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS CCA 90 bp TGGCCCGAGGCCGGTTCCAGCGCTAGGGGACTCAGGCTGGGCTTCTaGCCTCTCTTGCTGGGTAGGTCAATGCACTTTTCCAGCACTGGC +
Preference number: 5 (lower is better)
Translates to: WPEAGSSARGLRLGF*PLLLGRSMHFSSTG
Trigger: GCCAGTGCTGGAAAAGTGCATTGACCTACCCAGCAAGAGAGGCCAGAAGCCCAGCCTGAGTCCCCTAGCGCTGGAACCGGCCTCGGGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS CCA 90 bp ACTGCTGGACAGAGTGGCCCCGCCCACCTTGGGAGGGTTCAGGGATaGCTGTATGTCACCAAGGCCCATGCCTACGGTTCCCTGCAAGTG +
Preference number: 5 (lower is better)
Translates to: TAGQSGPAHLGRVQG*LYVTKAHAYGSLQV
Trigger: CACTTGCAGGGAACCGTAGGCATGGGCCTTGGTGACATACAGCCATCCCTGAACCCTCCCAAGGTGGGCGGGGCCACTCTGTCCAGCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS CCA 90 bp CTGCATCCTGGCCCGAGGCCGGTTCCAGCGCTAGGGGACTCAGGCTaGGCTTCTGGCCTCTCTTGCTGGGTAGGTCAATGCACTTTTCCA +
Preference number: 5 (lower is better)
Translates to: LHPGPRPVPALGDSG*ASGLSCWVGQCTFP
Trigger: TGGAAAAGTGCATTGACCTACCCAGCAAGAGAGGCCAGAAGCCCAGCCTGAGTCCCCTAGCGCTGGAACCGGCCTCGGGCCAGGATGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS CCA 90 bp CAATGGCTGGAGTCCATTGCACTCAGCCGAGCTGCTAGGGGTCGCTaGGGAGTTGTGGCTGCTGGGGGATGGTACCACACTTCCCAAGAG +
Preference number: 5 (lower is better)
Translates to: QWLESIALSRAARGR*GVVAAGGWYHTSQE
Trigger: CTCTTGGGAAGTGTGGTACCATCCCCCAGCAGCCACAACTCCCCAGCGACCCCTAGCAGCTCGGCTGAGTGCAATGGACTCCAGCCATTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS CCA 90 bp GTTGAGAGTGGGTGCATAGCTGCTGGTGAAGAAGCCACGGGTGACTaGAAGCTGGAAGGCACGGCTGGAACGTCCGGCTGGCTAGACACA +
Preference number: 5 (lower is better)
Translates to: VESGCIAAGEEATGD*KLEGTAGTSGWLDT
Trigger: TGTGTCTAGCCAGCCGGACGTTCCAGCCGTGCCTTCCAGCTTCCAGTCACCCGTGGCTTCTTCACCAGCAGCTATGCACCCACTCTCAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS GCA 90 bp TGCTCTGTGCGTGTGGGTGACGTCATGACCATGGGCGGTTTCCTCTaGTTGGACGCACCTCCGGGGACAATCTTTTCAGCGTTCCCACCT +
Preference number: 5 (lower is better)
Translates to: CSVRVGDVMTMGGFL*LDAPPGTIFSAFPP
Trigger: AGGTGGGAACGCTGAAAAGATTGTCCCCGGAGGTGCGTCCAAGCAGAGGAAACCGCCCATGGTCATGACGTCACCCACACGCACAGAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS GCA 90 bp CCGGTTCCAGCGCTAGGGGACTCAGGCTGGGCTTCTGGCCTCTCTTaGTGGGTAGGTCAATGCACTTTTCCAGCACTGGCATTTGGTCTC +
Preference number: 5 (lower is better)
Translates to: PVPALGDSGWASGLS*WVGQCTFPALAFGL
Trigger: GAGACCAAATGCCAGTGCTGGAAAAGTGCATTGACCTACCCAGCAAGAGAGGCCAGAAGCCCAGCCTGAGTCCCCTAGCGCTGGAACCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS CCA 90 bp GTGGCCGTGCCGGTTCTTTGTGCTGGTGTCGGATGGAATGGCCTCTaGGTTGTCAAGGGAACAGAAGTCGAAAGAGTACCTCCGCCGGGA +
Preference number: 5 (lower is better)
Translates to: VAVPVLCAGVGWNGL*VVKGTEVERVPPPG
Trigger: TCCCGGCGGAGGTACTCTTTCGACTTCTGTTCCCTTGACAACCCAGAGGCCATTCCATCCGACACCAGCACAAAGAACCGGCACGGCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS TCA 90 bp TCTCCTGAACAGCCAGGAGCAGGTGGGGATCTGGATGAGGAGCCCTaGAGGAATTCCGACTCACTCCCTCTTTGCCGGCAGCTGCTTAAC +
Preference number: 5 (lower is better)
Translates to: SPEQPGAGGDLDEEP*RNSDSLPLCRQLLN
Trigger: GTTAAGCAGCTGCCGGCAAAGAGGGAGTGAGTCGGAATTCCTTCAGGGCTCCTCATCCAGATCCCCACCTGCTCCTGGCTGTTCAGGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS TCA 90 bp CATGAGAACTTGCGTGGAACTGGGGTGGTGGCACTGTCGGCCTCATaGAAGGGGATGCTGCTCCGAGTGTGTGTGACAGGTACAGAGGAG +
Preference number: 5 (lower is better)
Translates to: HENLRGTGVVALSAS*KGMLLRVCVTGTEE
Trigger: CTCCTCTGTACCTGTCACACACACTCGGAGCAGCATCCCCTTTCATGAGGCCGACAGTGCCACCACCCCAGTTCCACGCAAGTTCTCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS GCA 90 bp TGTGGCTGCTGGGGGATGGTACCACACTTCCCAAGAGCAGGTCTTTaGTACTGCTGGACAACTGACTCCAGGCCCCTCCTGTACTGCCTT +
Preference number: 5 (lower is better)
Translates to: CGCWGMVPHFPRAGL*YCWTTDSRPLLYCL
Trigger: AAGGCAGTACAGGAGGGGCCTGGAGTCAGTTGTCCAGCAGTAGCAAAGACCTGCTCTTGGGAAGTGTGGTACCATCCCCCAGCAGCCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS GCA 90 bp GCAAACTTGGGGTGCTGGATCTCAGACAGCTTTCCTGATGGAGCGTaGTCTGTGCGTGTGGGTGACGTCATGACCATGGGCGGTTTCCTC +
Preference number: 5 (lower is better)
Translates to: ANLGCWISDSFPDGA*SVRVGDVMTMGGFL
Trigger: GAGGAAACCGCCCATGGTCATGACGTCACCCACACGCACAGAGCACGCTCCATCAGGAAAGCTGTCTGAGATCCAGCACCCCAAGTTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS GCA 90 bp TGGGCCAGAAAAGTGTCCACAATGAGATGCTTCTGCCGGTGGCCGTaGCGGTTCTTTGTGCTGGTGTCGGATGGAATGGCCTCTGGGTTG +
Preference number: 5 (lower is better)
Translates to: WARKVSTMRCFCRWP*RFFVLVSDGMASGL
Trigger: CAACCCAGAGGCCATTCCATCCGACACCAGCACAAAGAACCGGCACGGCCACCGGCAGAAGCATCTCATTGTGGACACTTTTCTGGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS CCA 90 bp TCTGCCGGTGGCCGTGCCGGTTCTTTGTGCTGGTGTCGGATGGAATaGCCTCTGGGTTGTCAAGGGAACAGAAGTCGAAAGAGTACCTCC +
Preference number: 5 (lower is better)
Translates to: SAGGRAGSLCWCRME*PLGCQGNRSRKSTS
Trigger: GGAGGTACTCTTTCGACTTCTGTTCCCTTGACAACCCAGAGGCCATTCCATCCGACACCAGCACAAAGAACCGGCACGGCCACCGGCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS CCA 90 bp GTTCCAGCGCTAGGGGACTCAGGCTGGGCTTCTGGCCTCTCTTGCTaGGTAGGTCAATGCACTTTTCCAGCACTGGCATTTGGTCTCTGG +
Preference number: 5 (lower is better)
Translates to: VPALGDSGWASGLSC*VGQCTFPALAFGLW
Trigger: CCAGAGACCAAATGCCAGTGCTGGAAAAGTGCATTGACCTACCCAGCAAGAGAGGCCAGAAGCCCAGCCTGAGTCCCCTAGCGCTGGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS GCA 90 bp CCACATCTCGTCCTGAGCCCAATTCATCCTCCTCCTCTGGCTCCATaGGTTCTCCACCCACAGAGATGCCTTTCAAGGGCTCTCCTGAAC +
Preference number: 5 (lower is better)
Translates to: PHLVLSPIHPPPLAP*VLHPQRCLSRALLN
Trigger: GTTCAGGAGAGCCCTTGAAAGGCATCTCTGTGGGTGGAGAACGCATGGAGCCAGAGGAGGAGGATGAATTGGGCTCAGGACGAGATGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS GCA 90 bp GGGCTCAGGTTGCCATTGGACCCACCTAACTGTGTTGAGAGTGGGTaGATAGCTGCTGGTGAAGAAGCCACGGGTGACTGGAAGCTGGAA +
Preference number: 5 (lower is better)
Translates to: GLRLPLDPPNCVESG*IAAGEEATGDWKLE
Trigger: TTCCAGCTTCCAGTCACCCGTGGCTTCTTCACCAGCAGCTATGCACCCACTCTCAACACAGTTAGGTGGGTCCAATGGCAACCTGAGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS GCA 90 bp GGCTTCTTGAGGCTTTCGTGGGCCAGAAAAGTGTCCACAATGAGATaGTTCTGCCGGTGGCCGTGCCGGTTCTTTGTGCTGGTGTCGGAT +
Preference number: 5 (lower is better)
Translates to: GFLRLSWARKVSTMR*FCRWPCRFFVLVSD
Trigger: ATCCGACACCAGCACAAAGAACCGGCACGGCCACCGGCAGAAGCATCTCATTGTGGACACTTTTCTGGCCCACGAAAGCCTCAAGAAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS GCA 90 bp CCACCTTGGGAGGGTTCAGGGATGGCTGTATGTCACCAAGGCCCATaGCTACGGTTCCCTGCAAGTGGACGCCATGCTTGGCTTTATGTT +
Preference number: 5 (lower is better)
Translates to: PPWEGSGMAVCHQGP*LRFPASGRHAWLYV
Trigger: AACATAAAGCCAAGCATGGCGTCCACTTGCAGGGAACCGTAGGCATGGGCCTTGGTGACATACAGCCATCCCTGAACCCTCCCAAGGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS GCA 90 bp CCTTGTGCTTACGCTTATGTTTGTGTTTCCTCTTGTGGAGCCTACTaGTGGACAGAGTGGCCCCGCCCACCTTGGGAGGGTTCAGGGATG +
Preference number: 5 (lower is better)
Translates to: PCAYAYVCVSSCGAY*WTEWPRPPWEGSGM
Trigger: CATCCCTGAACCCTCCCAAGGTGGGCGGGGCCACTCTGTCCAGCAGTAGGCTCCACAAGAGGAAACACAAACATAAGCGTAAGCACAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS GCA 90 bp AGCACTGGCATTTGGTCTCTGGAGTCCTCATCGAACTGTGAGGGCTaGTTCCTAGGCCGGCCTCGCCTCTTCTTGACAAAGTTGTTGCCC +
Preference number: 5 (lower is better)
Translates to: STGIWSLESSSNCEG*FLGRPRLFLTKLLP
Trigger: GGGCAACAACTTTGTCAAGAAGAGGCGAGGCCGGCCTAGGAAGCAGCCCTCACAGTTCGATGAGGACTCCAGAGACCAAATGCCAGTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS CCA 90 bp GCGCCGTCTCTTCCTTTTCTTGGTGCCAGGAAACTCTCTGCTGATTaGGCTGACGGGGCTAGTGGAAGTGCCTTCGTGAATCGTCTCCAC +
Preference number: 5 (lower is better)
Translates to: APSLPFLGARKLSAD*ADGASGSAFVNRLH
Trigger: GTGGAGACGATTCACGAAGGCACTTCCACTAGCCCCGTCAGCCCAATCAGCAGAGAGTTTCCTGGCACCAAGAAAAGGAAGAGACGGCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS CCA 90 bp TTGTCTGTCCCGATGCCACTGTCGCTCGGGATAGTCTCCTCGCTGTaGGACTCACTCACAGGGGACAACGTTATCTCCTTCAGTGAGCCA +
Preference number: 5 (lower is better)
Translates to: LSVPMPLSLGIVSSL*DSLTGDNVISFSEP
Trigger: TGGCTCACTGAAGGAGATAACGTTGTCCCCTGTGAGTGAGTCCCACAGCGAGGAGACTATCCCGAGCGACAGTGGCATCGGGACAGACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS CCA 90 bp CTTTCGTGGGCCAGAAAAGTGTCCACAATGAGATGCTTCTGCCGGTaGCCGTGCCGGTTCTTTGTGCTGGTGTCGGATGGAATGGCCTCT +
Preference number: 5 (lower is better)
Translates to: LSWARKVSTMRCFCR*PCRFFVLVSDGMAS
Trigger: AGAGGCCATTCCATCCGACACCAGCACAAAGAACCGGCACGGCCACCGGCAGAAGCATCTCATTGTGGACACTTTTCTGGCCCACGAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR CAA 90 bp TTGGAGGGGGTTCCCTCATTCCACTACCCCAAGAGCTCCCTAAAGCTCCACCCTGAGAAGCCTGTGGCTTaGCCTGCAAAGAGACCACTC +
Preference number: 5 (lower is better)
Translates to: LEGVPSFHYPKSSLKLHPEKPVA*PAKRPL
Trigger: GAGTGGTCTCTTTGCAGGCAAAGCCACAGGCTTCTC...AGGGTGGAGCTTTAGGGAGCTCTTGGGGTAGTGGAATGAGGGAACCCCCTCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR CAA 90 bp TTGGAGGGGGTTCCCTCATTCCACTACCCCAAGAGCTCCCTAAAGCTCCACCCTCACTGTCCACTGCAGTaGGCTTCTTCCTGGCCATCA +
Preference number: 5 (lower is better)
Translates to: LEGVPSFHYPKSSLKLHPHCPLQ*ASSWPS
Trigger: TGATGGCCAGGAAGAAGCCAACTGCAGTGGACAGTG...AGGGTGGAGCTTTAGGGAGCTCTTGGGGTAGTGGAATGAGGGAACCCCCTCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS TCA 90 bp TGGCACTGTCGGCCTCATGAAAGGGGATGCTGCTCCGAGTGTGTGTaGCAGGTACAGAGGAGCCGGGTACTGACCATAGTAACCAAGGTT +
Preference number: 5 (lower is better)
Translates to: WHCRPHERGCCSECV*QVQRSRVLTIVTKV
Trigger: AACCTTGGTTACTATGGTCAGTACCCGGCTCCTCTGTACCTGTCACACACACTCGGAGCAGCATCCCCTTTCATGAGGCCGACAGTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS GCA 90 bp GGAACTGATGCTCTGCCGGGCTGGCGATGCCTCTTGAGCACTGTCTaGAGAGTAGGCCTCCCGTTTCCCTTCTGTGGTTTCAAATGCTTT +
Preference number: 5 (lower is better)
Translates to: GTDALPGWRCLLSTV*RVGLPFPFCGFKCF
Trigger: AAAGCATTTGAAACCACAGAAGGGAAACGGGAGGCCTACTCTGCAGACAGTGCTCAAGAGGCATCGCCAGCCCGGCAGAGCATCAGTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS GCA 90 bp TTGAGGCTTTCGTGGGCCAGAAAAGTGTCCACAATGAGATGCTTCTaGCGGTGGCCGTGCCGGTTCTTTGTGCTGGTGTCGGATGGAATG +
Preference number: 5 (lower is better)
Translates to: LRLSWARKVSTMRCF*RWPCRFFVLVSDGM
Trigger: CATTCCATCCGACACCAGCACAAAGAACCGGCACGGCCACCGGCAGAAGCATCTCATTGTGGACACTTTTCTGGCCCACGAAAGCCTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS GCA 90 bp TTCAGGGATGGCTGTATGTCACCAAGGCCCATGCCTACGGTTCCCTaGAAGTGGACGCCATGCTTGGCTTTATGTTTCGTTGCCCCGGAT +
Preference number: 5 (lower is better)
Translates to: FRDGCMSPRPMPTVP*KWTPCLALCFVAPD
Trigger: ATCCGGGGCAACGAAACATAAAGCCAAGCATGGCGTCCACTTGCAGGGAACCGTAGGCATGGGCCTTGGTGACATACAGCCATCCCTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS GCA 90 bp TCAAAGTTGTTCTTGGAAACCTTGTGGCTGGCCTCCCCGTGCTGGTaGTTCTGTCTCTCCTTGTGTTTGCTCTTCTCGCTCACCAGCGGC +
Preference number: 5 (lower is better)
Translates to: SKLFLETLWLASPCW*FCLSLCLLFSLTSG
Trigger: GCCGCTGGTGAGCGAGAAGAGCAAACACAAGGAGAGACAGAAGCACCAGCACGGGGAGGCCAGCCACAAGGTTTCCAAGAACAACTTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS GCA 90 bp ACAGGCTCACTGCTCAAGTCACCTTTGTCCTTAGCCTGTGTCCAGTaGTGGGCGTCAGAAAGTGACAGCGTAGACAGGGTGTCCACCTCA +
Preference number: 5 (lower is better)
Translates to: TGSLLKSPLSLACVQ*WASESDSVDRVSTS
Trigger: TGAGGTGGACACCCTGTCTACGCTGTCACTTTCTGACGCCCAGCACTGGACACAGGCTAAGGACAAAGGTGACTTGAGCAGTGAGCCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS CCA 90 bp GGAATCATTTTCCGGATTACTGACGGAACTGATGCTCTGCCGGGCTaGCGATGCCTCTTGAGCACTGTCTGCAGAGTAGGCCTCCCGTTT +
Preference number: 5 (lower is better)
Translates to: GIIFRITDGTDALPG*RCLLSTVCRVGLPF
Trigger: AAACGGGAGGCCTACTCTGCAGACAGTGCTCAAGAGGCATCGCCAGCCCGGCAGAGCATCAGTTCCGTCAGTAATCCGGAAAATGATTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS CCA 90 bp AAGTCGAAAGAGTACCTCCGCCGGGATTCTGAACTCTTCTCTGCTTaGTCGGAGGTGCTGTTGTTGTCTGTCCCGATGCCACTGTCGCTC +
Preference number: 5 (lower is better)
Translates to: KSKEYLRRDSELFSA*SEVLLLSVPMPLSL
Trigger: GAGCGACAGTGGCATCGGGACAGACAACAACAGCACCTCCGACCAAGCAGAGAAGAGTTCAGAATCCCGGCGGAGGTACTCTTTCGACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS CCA 90 bp ATGCTTCTGCCGGTGGCCGTGCCGGTTCTTTGTGCTGGTGTCGGATaGAATGGCCTCTGGGTTGTCAAGGGAACAGAAGTCGAAAGAGTA +
Preference number: 5 (lower is better)
Translates to: MLLPVAVPVLCAGVG*NGLWVVKGTEVERV
Trigger: TACTCTTTCGACTTCTGTTCCCTTGACAACCCAGAGGCCATTCCATCCGACACCAGCACAAAGAACCGGCACGGCCACCGGCAGAAGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS CCA 90 bp GGCTCACTGCTCAAGTCACCTTTGTCCTTAGCCTGTGTCCAGTGCTaGGCGTCAGAAAGTGACAGCGTAGACAGGGTGTCCACCTCAAAG +
Preference number: 5 (lower is better)
Translates to: GSLLKSPLSLACVQC*ASESDSVDRVSTSK
Trigger: CTTTGAGGTGGACACCCTGTCTACGCTGTCACTTTCTGACGCCCAGCACTGGACACAGGCTAAGGACAAAGGTGACTTGAGCAGTGAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS TCA 90 bp CACCCATGTCACTGTCCCACTTGTCGCTGGAAGGATTCATTTCACTaGACACATCCAGACCCTCCGATCTTGTGCTGTCTCCACCGCTGC +
Preference number: 5 (lower is better)
Translates to: HPCHCPTCRWKDSFH*THPDPPILCCLHRC
Trigger: GCAGCGGTGGAGACAGCACAAGATCGGAGGGTCTGGATGTGTTCAGTGAAATGAATCCTTCCAGCGACAAGTGGGACAGTGACATGGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS TCA 90 bp CTTTTCCAGCACTGGCATTTGGTCTCTGGAGTCCTCATCGAACTGTaGGGGCTGCTTCCTAGGCCGGCCTCGCCTCTTCTTGACAAAGTT +
Preference number: 5 (lower is better)
Translates to: LFQHWHLVSGVLIEL*GLLPRPASPLLDKV
Trigger: AACTTTGTCAAGAAGAGGCGAGGCCGGCCTAGGAAGCAGCCCTCACAGTTCGATGAGGACTCCAGAGACCAAATGCCAGTGCTGGAAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS GCA 90 bp GGAGGTTTGGCCTTGCTACACCTCCTTTTTGCAGCAAACTTGGGGTaGTGGATCTCAGACAGCTTTCCTGATGGAGCGTGCTCTGTGCGT +
Preference number: 5 (lower is better)
Translates to: GGLALLHLLFAANLG*WISDSFPDGACSVR
Trigger: ACGCACAGAGCACGCTCCATCAGGAAAGCTGTCTGAGATCCAGCACCCCAAGTTTGCTGCAAAAAGGAGGTGTAGCAAGGCCAAACCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS CCA 90 bp AAGAGCTGGGACCTTGCTGGTGCTTGCAGTGTCTCGGCCAGCCTCTaGACTGATGAAGCAATTCTGAGTAGCTGGTCCACTGTCAGAGTT +
Preference number: 5 (lower is better)
Translates to: KSWDLAGACSVSASL*TDEAILSSWSTVRV
Trigger: AACTCTGACAGTGGACCAGCTACTCAGAATTGCTTCATCAGTCCAGAGGCTGGCCGAGACACTGCAAGCACCAGCAAGGTCCCAGCTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS CCA 90 bp GGTTTGGCCTTGCTACACCTCCTTTTTGCAGCAAACTTGGGGTGCTaGATCTCAGACAGCTTTCCTGATGGAGCGTGCTCTGTGCGTGTG +
Preference number: 5 (lower is better)
Translates to: GLALLHLLFAANLGC*ISDSFPDGACSVRV
Trigger: CACACGCACAGAGCACGCTCCATCAGGAAAGCTGTCTGAGATCCAGCACCCCAAGTTTGCTGCAAAAAGGAGGTGTAGCAAGGCCAAACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS CCA 90 bp AGGCTCTTCCGTTTCCTCTTGTGCTTTGGCTTCTTGAGGCTTTCGTaGGCCAGAAAAGTGTCCACAATGAGATGCTTCTGCCGGTGGCCG +
Preference number: 5 (lower is better)
Translates to: RLFRFLLCFGFLRLS*ARKVSTMRCFCRWP
Trigger: CGGCCACCGGCAGAAGCATCTCATTGTGGACACTTTTCTGGCCCACGAAAGCCTCAAGAAGCCAAAGCACAAGAGGAAACGGAAGAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS CCA 90 bp ACCTCAAAGTTGTTCTTGGAAACCTTGTGGCTGGCCTCCCCGTGCTaGTGCTTCTGTCTCTCCTTGTGTTTGCTCTTCTCGCTCACCAGC +
Preference number: 5 (lower is better)
Translates to: TSKLFLETLWLASPC*CFCLSLCLLFSLTS
Trigger: GCTGGTGAGCGAGAAGAGCAAACACAAGGAGAGACAGAAGCACCAGCACGGGGAGGCCAGCCACAAGGTTTCCAAGAACAACTTTGAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS TCA 90 bp GTTGTCAAGGGAACAGAAGTCGAAAGAGTACCTCCGCCGGGATTCTaGACTCTTCTCTGCTTGGTCGGAGGTGCTGTTGTTGTCTGTCCC +
Preference number: 5 (lower is better)
Translates to: VVKGTEVERVPPPGF*TLLCLVGGAVVVCP
Trigger: GGGACAGACAACAACAGCACCTCCGACCAAGCAGAGAAGAGTTCAGAATCCCGGCGGAGGTACTCTTTCGACTTCTGTTCCCTTGACAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS TCA 90 bp ACGCCATGCTTGGCTTTATGTTTCGTTGCCCCGGATATCTTTACATaGGAACTTGCGTGGAACTGGGGTGGTGGCACTGTCGGCCTCATG +
Preference number: 5 (lower is better)
Translates to: TPCLALCFVAPDIFT*ELAWNWGGGTVGLM
Trigger: CATGAGGCCGACAGTGCCACCACCCCAGTTCCACGCAAGTTCTCATGTAAAGATATCCGGGGCAACGAAACATAAAGCCAAGCATGGCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS GCA 90 bp TTTAAGCTCCCCTCAGTGAAGTTGGCCTCCTTGATGGAGAACTCCTaGTCCTCCAAGCCATCTCCAGCCACCCATTTCTCACTGTCTGCA +
Preference number: 5 (lower is better)
Translates to: FKLPSVKLASLMENS*SSKPSPATHFSLSA
Trigger: TGCAGACAGTGAGAAATGGGTGGCTGGAGATGGCTTGGAGGAGCAGGAGTTCTCCATCAAGGAGGCCAACTTCACTGAGGGGAGCTTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS CCA 90 bp GATGGCTGTATGTCACCAAGGCCCATGCCTACGGTTCCCTGCAAGTaGACGCCATGCTTGGCTTTATGTTTCGTTGCCCCGGATATCTTT +
Preference number: 5 (lower is better)
Translates to: DGCMSPRPMPTVPCK*TPCLALCFVAPDIF
Trigger: AAAGATATCCGGGGCAACGAAACATAAAGCCAAGCATGGCGTCCACTTGCAGGGAACCGTAGGCATGGGCCTTGGTGACATACAGCCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS CCA 90 bp GAATCGCAACACTGTCCACTGCAGTTGGCTTCTTCCTGGCCATCATaGCAGATATTGAGCCCTCGCTCTTACTGTGTGCTGCTGTCTGGT +
Preference number: 5 (lower is better)
Translates to: ESQHCPLQLASSWPS*QILSPRSYCVLLSG
Trigger: ACCAGACAGCAGCACACAGTAAGAGCGAGGGCTCAATATCTGCCATGATGGCCAGGAAGAAGCCAACTGCAGTGGACAGTGTTGCGATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS CCA 90 bp GCCGCTTGGCCTTCAGGATTTTGTTCACGTGGTCCAGGTTCTTCTTaGTGGACAGAAGCTTGGTGTAATGGCACATCTTCCGCACTTCGC +
Preference number: 5 (lower is better)
Translates to: AAWPSGFCSRGPGSS*WTEAWCNGTSSALR
Trigger: GCGAAGTGCGGAAGATGTGCCATTACACCAAGCTTCTGTCCACCAAGAAGAACCTGGACCACGTGAACAAAATCCTGAAGGCCAAGCGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS TCA 90 bp GTCACTGGTGAAGCCCTGGGAGTGACCTGGGTCATACTGAAGTGTTaGGTGTTTCTGGGGCCTCTCGTATGCCTGTGTCTGAAATGCTTT +
Preference number: 5 (lower is better)
Translates to: VTGEALGVTWVILKC*VFLGPLVCLCLKCF
Trigger: AAAGCATTTCAGACACAGGCATACGAGAGGCCCCAGAAACACTCAACACTTCAGTATGACCCAGGTCACTCCCAGGGCTTCACCAGTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS TCA 90 bp GTCACCTTTGTCCTTAGCCTGTGTCCAGTGCTGGGCGTCAGAAAGTaGCAGCGTAGACAGGGTGTCCACCTCAAAGTTGTTCTTGGAAAC +
Preference number: 5 (lower is better)
Translates to: VTFVLSLCPVLGVRK*QRRQGVHLKVVLGN
Trigger: GTTTCCAAGAACAACTTTGAGGTGGACACCCTGTCTACGCTGTCACTTTCTGACGCCCAGCACTGGACACAGGCTAAGGACAAAGGTGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS GCA 90 bp TACGGTTCCCTGCAAGTGGACGCCATGCTTGGCTTTATGTTTCGTTaGCCCGGATATCTTTACATGAGAACTTGCGTGGAACTGGGGTGG +
Preference number: 5 (lower is better)
Translates to: YGSLQVDAMLGFMFR*PGYLYMRTCVELGW
Trigger: CCACCCCAGTTCCACGCAAGTTCTCATGTAAAGATATCCGGGGCAACGAAACATAAAGCCAAGCATGGCGTCCACTTGCAGGGAACCGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS GCA 90 bp CCTCGCCTCTTCTTGACAAAGTTGTTGCCCGTCTTTGATTGTCTCTaGAGCCGCTTGGCCTTCAGGATTTTGTTCACGTGGTCCAGGTTC +
Preference number: 5 (lower is better)
Translates to: PRLFLTKLLPVFDCL*SRLAFRILFTWSRF
Trigger: GAACCTGGACCACGTGAACAAAATCCTGAAGGCCAAGCGGCTGCAGAGACAATCAAAGACGGGCAACAACTTTGTCAAGAAGAGGCGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS CCA 90 bp TGTGATCACAGTAAGACTGTCCGTGTTGGTGTACAGAGGGCTGGATaGGGTAATGGGGTAAGCAGACGGTGGCTCCACCATCAGTTTTTC +
Preference number: 5 (lower is better)
Translates to: CDHSKTVRVGVQRAG*GNGVSRRWLHHQFF
Trigger: GAAAAACTGATGGTGGAGCCACCGTCTGCTTACCCCATTACCCCATCCAGCCCTCTGTACACCAACACGGACAGTCTTACTGTGATCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS CCA 90 bp CACCAAGGCCCATGCCTACGGTTCCCTGCAAGTGGACGCCATGCTTaGCTTTATGTTTCGTTGCCCCGGATATCTTTACATGAGAACTTG +
Preference number: 5 (lower is better)
Translates to: HQGPCLRFPASGRHA*LYVSLPRISLHENL
Trigger: CAAGTTCTCATGTAAAGATATCCGGGGCAACGAAACATAAAGCCAAGCATGGCGTCCACTTGCAGGGAACCGTAGGCATGGGCCTTGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS CCA 90 bp ATCATGGCAGATATTGAGCCCTCGCTCTTACTGTGTGCTGCTGTCTaGTCCACTTTTAAGTGGGGACTTGGCATCCCTGGAGACATGGAG +
Preference number: 5 (lower is better)
Translates to: IMADIEPSLLLCAAV*STFKWGLGIPGDME
Trigger: CTCCATGTCTCCAGGGATGCCAAGTCCCCACTTAAAAGTGGACCAGACAGCAGCACACAGTAAGAGCGAGGGCTCAATATCTGCCATGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR CAA 90 bp CTTTTGAGGCATTTCAGCTCCCGCCACTCCCCCTCTATGCTACAGTTGGCATTTGTAAGACTGTCCGTGTaGGTGTACAGAGGGCTGGAT +
Preference number: 5 (lower is better)
Translates to: LLRHFSSRHSPSMLQLAFVRLSV*VYRGLD
Trigger: ATCCAGCCCTCTGTACACCAACACGGACAGTCTTAC...AAATGCCAACTGTAGCATAGAGGGGGAGTGGCGGGAGCTGAAATGCCTCAAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR CAA 90 bp CTTTTGAGGCATTTCAGCTCCCGCCACTCCCCCTCTATGCTACAGTTGGCATTTCGTCCCCGCTTCTTTTaGACCGGTGTGATCACAGTA +
Preference number: 5 (lower is better)
Translates to: LLRHFSSRHSPSMLQLAFRPRFF*TGVITV
Trigger: TACTGTGATCACACCGGTCAAAAAGAAGCGGGGACG...AAATGCCAACTGTAGCATAGAGGGGGAGTGGCGGGAGCTGAAATGCCTCAAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR CAA 90 bp CTTTTGAGGCATTTCAGCTCCCGCCACTCCCCCTCTATGCTACAGTTGGCATTTTTGTGCTTTGGCTTCTaGAGGCTTTCGTGGGCCAGA +
Preference number: 5 (lower is better)
Translates to: LLRHFSSRHSPSMLQLAFLCFGF*RLSWAR
Trigger: TCTGGCCCACGAAAGCCTCAAGAAGCCAAAGCACAA...AAATGCCAACTGTAGCATAGAGGGGGAGTGGCGGGAGCTGAAATGCCTCAAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS GCA 90 bp AACTGGAGATCATCGCGGTTTTGCAGGCTCTTCCGTTTCCTCTTGTaGTTTGGCTTCTTGAGGCTTTCGTGGGCCAGAAAAGTGTCCACA +
Preference number: 5 (lower is better)
Translates to: NWRSSRFCRLFRFLL*FGFLRLSWARKVST
Trigger: TGTGGACACTTTTCTGGCCCACGAAAGCCTCAAGAAGCCAAAGCACAAGAGGAAACGGAAGAGCCTGCAAAACCGCGATGATCTCCAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS CCA 90 bp AGTGCCTTCGTGAATCGTCTCCACAGTGAGCAGAGGTTGCTTCTTTaGTCGTCCCCGCTTCTTTTTGACCGGTGTGATCACAGTAAGACT +
Preference number: 5 (lower is better)
Translates to: SAFVNRLHSEQRLLL*SSPLLFDRCDHSKT
Trigger: AGTCTTACTGTGATCACACCGGTCAAAAAGAAGCGGGGACGACCAAAGAAGCAACCTCTGCTCACTGTGGAGACGATTCACGAAGGCACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS CCA 90 bp GAGATCATCGCGGTTTTGCAGGCTCTTCCGTTTCCTCTTGTGCTTTaGCTTCTTGAGGCTTTCGTGGGCCAGAAAAGTGTCCACAATGAG +
Preference number: 5 (lower is better)
Translates to: EIIAVLQALPFPLVL*LLEAFVGQKSVHNE
Trigger: CTCATTGTGGACACTTTTCTGGCCCACGAAAGCCTCAAGAAGCCAAAGCACAAGAGGAAACGGAAGAGCCTGCAAAACCGCGATGATCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS CCA 90 bp GAGAAGCCTGTGGCTTTGCCTGCAAAGAGACCACTCAGGTTGTCATaGGTCCCTAGGATTCGGTCTTCCTTGTGCTTACGCTTATGTTTG +
Preference number: 5 (lower is better)
Translates to: EKPVALPAKRPLRLS*VPRIRSSLCLRLCL
Trigger: CAAACATAAGCGTAAGCACAAGGAAGACCGAATCCTAGGGACCCATGACAACCTGAGTGGTCTCTTTGCAGGCAAAGCCACAGGCTTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR CAA 90 bp GAGTTACTCAGACATGGCTTGGGAGTGACAGATTGGAAATGGCTGTTTAGATTTGGACCTTGCTGGTGCTaGCAGTGTCTCGGCCAGCCT +
Preference number: 5 (lower is better)
Translates to: ELLRHGLGVTDWKWLFRFGPCWC*QCLGQP
Trigger: AGGCTGGCCGAGACACTGCAAGCACCAGCAAGGTCC...AAATCTAAACAGCCATTTCCAATCTGTCACTCCCAAGCCATGTCTGAGTAACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR CAA 90 bp CTGACACTTGGGTCGACATATCCATCGGCTGCTCTGAGTCACTTATTAAAAAGCGGCTGGCGATGCCTCTaGAGCACTGTCTGCAGAGTA +
Preference number: 5 (lower is better)
Translates to: LTLGSTYPSAALSHLLKSGWRCL*STVCRV
Trigger: TACTCTGCAGACAGTGCTCAAGAGGCATCGCCAGCC...GCTTTTTAATAAGTGACTCAGAGCAGCCGATGGATATGTCGACCCAAGTGTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR CAA 90 bp TTGGAGGGGGTTCCCTCATTCCACTACCCCAAGAGCTCCCTAAAGCTCCACCCTTTTTTCCTCTTATGGTaGCTTGGATCCAGAGAAGGT +
Preference number: 5 (lower is better)
Translates to: LEGVPSFHYPKSSLKLHPFFLLW*LGSREG
Trigger: ACCTTCTCTGGATCCAAGCAACCATAAGAGGAAAAA...AGGGTGGAGCTTTAGGGAGCTCTTGGGGTAGTGGAATGAGGGAACCCCCTCCAA
51% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR CAA 90 bp CTTTTGAGGCATTTCAGCTCCCGCCACTCCCCCTCTATGCTACAGTTGGCATTTCTTTTTGCAGCAAACTaGGGGTGCTGGATCTCAGAC +
Preference number: 5 (lower is better)
Translates to: LLRHFSSRHSPSMLQLAFLFAAN*GCWISD
Trigger: GTCTGAGATCCAGCACCCCAAGTTTGCTGCAAAAAG...AAATGCCAACTGTAGCATAGAGGGGGAGTGGCGGGAGCTGAAATGCCTCAAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR CAA 90 bp CTGACACTTGGGTCGACATATCCATCGGCTGCTCTGAGTCACTTATTAAAAAGCTTGTTCTTGGAAACCTaGTGGCTGGCCTCCCCGTGC +
Preference number: 5 (lower is better)
Translates to: LTLGSTYPSAALSHLLKSLFLET*WLASPC
Trigger: GCACGGGGAGGCCAGCCACAAGGTTTCCAAGAACAA...GCTTTTTAATAAGTGACTCAGAGCAGCCGATGGATATGTCGACCCAAGTGTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS GCA 90 bp ATGAGTTCTTCCAGCTCTGCCAGAAACTGGAGATCATCGCGGTTTTaGAGGCTCTTCCGTTTCCTCTTGTGCTTTGGCTTCTTGAGGCTT +
Preference number: 5 (lower is better)
Translates to: MSSSSSARNWRSSRF*RLFRFLLCFGFLRL
Trigger: AAGCCTCAAGAAGCCAAAGCACAAGAGGAAACGGAAGAGCCTGCAAAACCGCGATGATCTCCAGTTTCTGGCAGAGCTGGAAGAACTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS GCA 90 bp AGACCACTCAGGTTGTCATGGGTCCCTAGGATTCGGTCTTCCTTGTaGTTACGCTTATGTTTGTGTTTCCTCTTGTGGAGCCTACTGCTG +
Preference number: 5 (lower is better)
Translates to: RPLRLSWVPRIRSSL*LRLCLCFLLWSLLL
Trigger: CAGCAGTAGGCTCCACAAGAGGAAACACAAACATAAGCGTAAGCACAAGGAAGACCGAATCCTAGGGACCCATGACAACCTGAGTGGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS CCA 90 bp TCTTCCTTAGTCGCTTTGCTATTTTTCCCAGTACGGGACACCTTCTaGTCCCCAGACTGCTTTATGGTGATCTTGATCTCAGGTGGGCAG +
Preference number: 5 (lower is better)
Translates to: SSLVALLFFPVRDTF*SPDCFMVILISGGQ
Trigger: CTGCCCACCTGAGATCAAGATCACCATAAAGCAGTCTGGGGACCAGAAGGTGTCCCGTACTGGGAAAAATAGCAAAGCGACTAAGGAAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS CCA 90 bp GCTTGGCCTTCAGGATTTTGTTCACGTGGTCCAGGTTCTTCTTGGTaGACAGAAGCTTGGTGTAATGGCACATCTTCCGCACTTCGCATT +
Preference number: 5 (lower is better)
Translates to: AWPSGFCSRGPGSSW*TEAWCNGTSSALRI
Trigger: AATGCGAAGTGCGGAAGATGTGCCATTACACCAAGCTTCTGTCCACCAAGAAGAACCTGGACCACGTGAACAAAATCCTGAAGGCCAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR CAA 90 bp CAGAGGGAGCCTTGCTTTGTGGAAAGAAACGTGAAGAAACACCAAGAAGATGCTTGCTTGATGGCTGTTTaGGGTTCCTCGGATGGGGGT +
Preference number: 5 (lower is better)
Translates to: QREPCFVERNVKKHQEDACLMAV*GSSDGG
Trigger: ACCCCCATCCGAGGAACCCAAAACAGCCATCAAGCA...AGCATCTTCTTGGTGTTTCTTCACGTTTCTTTCCACAAAGCAAGGCTCCCTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR CAA 90 bp CAGAGGGAGCCTTGCTTTGTGGAAAGAAACGTGAAGAAACACCAAGAAGATGCTGGGCTCAGGTTGCCATaGGACCCACCTAACTGTGTT +
Preference number: 5 (lower is better)
Translates to: QREPCFVERNVKKHQEDAGLRLP*DPPNCV
Trigger: AACACAGTTAGGTGGGTCCAATGGCAACCTGAGCCC...AGCATCTTCTTGGTGTTTCTTCACGTTTCTTTCCACAAAGCAAGGCTCCCTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR CAA 90 bp CCATTGAACATGGCCTCCCACTTCAGACGGCAGCCAAGTTTATACACCGTTCTATGTTTGTGTTTCCTCTaGTGGAGCCTACTGCTGGAC +
Preference number: 5 (lower is better)
Translates to: PLNMASHFRRQPSLYTVLCLCFL*WSLLLD
Trigger: GTCCAGCAGTAGGCTCCACAAGAGGAAACACAAACA...TAGAACGGTGTATAAACTTGGCTGCCGTCTGAAGTGGGAGGCCATGTTCAATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS TCA 90 bp GAGACATGGAGGACTCATAAGAACCTCTCTCCTTGCGATTCATCTTaGAGGCTTGGATGTCCTTCTCCCTGTACGTCCCAAAGCCTTCAA +
Preference number: 5 (lower is better)
Translates to: ETWRTHKNLSPCDSS*RLGCPSPCTSQSLQ
Trigger: TTGAAGGCTTTGGGACGTACAGGGAGAAGGACATCCAAGCCTTCAAGATGAATCGCAAGGAGAGAGGTTCTTATGAGTCCTCCATGTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR CAA 90 bp TGCTACGGTATATTACAGTTTGAGTTTCTAGGCACTGTGATGACATTATCTGTAGGCGGTTTCCTCTGCTaGGACGCACCTCCGGGGACA +
Preference number: 5 (lower is better)
Translates to: CYGILQFEFLGTVMTLSVGGFLC*DAPPGT
Trigger: TGTCCCCGGAGGTGCGTCCAAGCAGAGGAAACCGCC...TACAGATAATGTCATCACAGTGCCTAGAAACTCAAACTGTAATATACCGTAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR CAA 90 bp CAGAGGGAGCCTTGCTTTGTGGAAAGAAACGTGAAGAAACACCAAGAAGATGCTGAGATCATCGCGGTTTaGCAGGCTCTTCCGTTTCCT +
Preference number: 5 (lower is better)
Translates to: QREPCFVERNVKKHQEDAEIIAV*QALPFP
Trigger: AGGAAACGGAAGAGCCTGCAAAACCGCGATGATCTC...AGCATCTTCTTGGTGTTTCTTCACGTTTCTTTCCACAAAGCAAGGCTCCCTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR CAA 90 bp CAATCAAATGGTGGATGTCTCTTGAGGTTTAATAAGCACCAGATTTCTCTCTTCCCAGACCCTCCGATCTaGTGCTGTCTCCACCGCTGC +
Preference number: 5 (lower is better)
Translates to: QSNGGCLLRFNKHQISLFPDPPI*CCLHRC
Trigger: GCAGCGGTGGAGACAGCACAAGATCGGAGGGTCTGG...GAAGAGAGAAATCTGGTGCTTATTAAACCTCAAGAGACATCCACCATTTGATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR CAA 90 bp CCATTGAACATGGCCTCCCACTTCAGACGGCAGCCAAGTTTATACACCGTTCTAATGTCACTGTCCCACTaGTCGCTGGAAGGATTCATT +
Preference number: 5 (lower is better)
Translates to: PLNMASHFRRQPSLYTVLMSLSH*SLEGFI
Trigger: AATGAATCCTTCCAGCGACAAGTGGGACAGTGACAT...TAGAACGGTGTATAAACTTGGCTGCCGTCTGAAGTGGGAGGCCATGTTCAATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR CAA 90 bp CTGACACTTGGGTCGACATATCCATCGGCTGCTCTGAGTCACTTATTAAAAAGCTGGTCCAGGTTCTTCTaGGTGGACAGAAGCTTGGTG +
Preference number: 5 (lower is better)
Translates to: LTLGSTYPSAALSHLLKSWSRFF*VDRSLV
Trigger: CACCAAGCTTCTGTCCACCAAGAAGAACCTGGACCA...GCTTTTTAATAAGTGACTCAGAGCAGCCGATGGATATGTCGACCCAAGTGTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR CAA 90 bp CTGACACTTGGGTCGACATATCCATCGGCTGCTCTGAGTCACTTATTAAAAAGCTGTCTCTGCAGCCGCTaGGCCTTCAGGATTTTGTTC +
Preference number: 5 (lower is better)
Translates to: LTLGSTYPSAALSHLLKSCLCSR*AFRILF
Trigger: GAACAAAATCCTGAAGGCCAAGCGGCTGCAGAGACA...GCTTTTTAATAAGTGACTCAGAGCAGCCGATGGATATGTCGACCCAAGTGTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR CAA 90 bp CTGACACTTGGGTCGACATATCCATCGGCTGCTCTGAGTCACTTATTAAAAAGCAGTTGTTGCCCGTCTTaGATTGTCTCTGCAGCCGCT +
Preference number: 5 (lower is better)
Translates to: LTLGSTYPSAALSHLLKSSCCPS*IVSAAA
Trigger: AGCGGCTGCAGAGACAATCAAAGACGGGCAACAACT...GCTTTTTAATAAGTGACTCAGAGCAGCCGATGGATATGTCGACCCAAGTGTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS TCA 90 bp CCTCCCGTTTCCCTTCTGTGGTTTCAAATGCTTTCTGGGCACTCTTaGCCCAATCCAGATCTGAGTTCGGTAGGGTTTGGCTTATCATAT +
Preference number: 5 (lower is better)
Translates to: PPVSLLWFQMLSGHS*PNPDLSSVGFGLSY
Trigger: ATATGATAAGCCAAACCCTACCGAACTCAGATCTGGATTGGGTCAAGAGTGCCCAGAAAGCATTTGAAACCACAGAAGGGAAACGGGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS TCA 90 bp AGGAGCCGGGTACTGACCATAGTAACCAAGGTTCATCATAGGCATTaGTGTGTAAGGCATTCCATAGGGTGCATAGTAACTTCCACTGGG +
Preference number: 5 (lower is better)
Translates to: RSRVLTIVTKVHHRH*CVRHSIGCIVTSTG
Trigger: CCCAGTGGAAGTTACTATGCACCCTATGGAATGCCTTACACATCAATGCCTATGATGAACCTTGGTTACTATGGTCAGTACCCGGCTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR CAA 90 bp CGCGTTAAGTGGCAGATCCAGTGTATCTCTACTGAATCTTTTTACTCTTTTGGAGTGGAAGCTCTGTCCTaGGCTTCCTGCCCCTCTTCT +
Preference number: 5 (lower is better)
Translates to: RVKWQIQCISTESFYSFGVEALS*ASCPSS
Trigger: AGAAGAGGGGCAGGAAGCCAAGGACAGAGCTTCCAC...TCCAAAAGAGTAAAAAGATTCAGTAGAGATACACTGGATCTGCCACTTAACGCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR CAA 90 bp AGTATAAAAATAACCTGGCTGACACTTGGGTCGACATATCCATCGGCTGCTCTGACCTCAAAGTTGTTCTaGGAAACCTTGTGGCTGGCC +
Preference number: 5 (lower is better)
Translates to: SIKITWLTLGSTYPSAALTSKLF*ETLWLA
Trigger: GGCCAGCCACAAGGTTTCCAAGAACAACTTTGAGGT...CAGAGCAGCCGATGGATATGTCGACCCAAGTGTCAGCCAGGTTATTTTTATACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR CAA 90 bp AGTATAAAAATAACCTGGCTGACACTTGGGTCGACATATCCATCGGCTGCTCTGTCGATCTCCCGTCTCTaGAATCTCTTCTTCAGGGAG +
Preference number: 5 (lower is better)
Translates to: SIKITWLTLGSTYPSAALSISRL*NLFFRE
Trigger: CTCCCTGAAGAAGAGATTCAAGAGACGGGAGATCGA...CAGAGCAGCCGATGGATATGTCGACCCAAGTGTCAGCCAGGTTATTTTTATACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR CAA 90 bp CTGACACTTGGGTCGACATATCCATCGGCTGCTCTGAGTCACTTATTAAAAAGCTTGGCCTTCAGGATTTaGTTCACGTGGTCCAGGTTC +
Preference number: 5 (lower is better)
Translates to: LTLGSTYPSAALSHLLKSLAFRI*FTWSRF
Trigger: GAACCTGGACCACGTGAACAAAATCCTGAAGGCCAA...GCTTTTTAATAAGTGACTCAGAGCAGCCGATGGATATGTCGACCCAAGTGTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR CAA 90 bp CTTTTGAGGCATTTCAGCTCCCGCCACTCCCCCTCTATGCTACAGTTGGCATTTTTCTTGACAAAGTTGTaGCCCGTCTTTGATTGTCTC +
Preference number: 5 (lower is better)
Translates to: LLRHFSSRHSPSMLQLAFFLTKL*PVFDCL
Trigger: GAGACAATCAAAGACGGGCAACAACTTTGTCAAGAA...AAATGCCAACTGTAGCATAGAGGGGGAGTGGCGGGAGCTGAAATGCCTCAAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR CAA 90 bp AGACAGATATCCAGGAAGTTCCTTCCTTGGTTGATATGTGCTTCTATGACTGTTGACTTCCGTGGCCTTTaGGCCTTCACCTCCTCTTCC +
Preference number: 5 (lower is better)
Translates to: RQISRKFLPWLICASMTVDFRGL*AFTSSS
Trigger: GGAAGAGGAGGTGAAGGCCAAAAGGCCACGGAAGTC...AACAGTCATAGAAGCACATATCAACCAAGGAAGGAACTTCCTGGATATCTGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS TCA 90 bp CTTGGATCCAGAGAAGGTGTCTTTATGGGGATAGTAATCCGGACATaGCTGGAATCATTTTCCGGATTACTGACGGAACTGATGCTCTGC +
Preference number: 5 (lower is better)
Translates to: LGSREGVFMGIVIRT*LESFSGLLTELMLC
Trigger: GCAGAGCATCAGTTCCGTCAGTAATCCGGAAAATGATTCCAGTCATGTCCGGATTACTATCCCCATAAAGACACCTTCTCTGGATCCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR CAA 90 bp GAGATCCTGTGTTCTGATGTGATAATGCAGTTTCTTAGCTGGTCTCAACTTTCTGCCGGAGGTTTGGCCTaGCTACACCTCCTTTTTGCA +
Preference number: 5 (lower is better)
Translates to: EILCSDVIMQFLSWSQLSAGGLA*LHLLFA
Trigger: TGCAAAAAGGAGGTGTAGCAAGGCCAAACCTCCGGC...AGAAAGTTGAGACCAGCTAAGAAACTGCATTATCACATCAGAACACAGGATCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR CAA 90 bp CAATCAAATGGTGGATGTCTCTTGAGGTTTAATAAGCACCAGATTTCTCTCTTCCACAGTGAGCAGAGGTaGCTTCTTTGGTCGTCCCCG +
Preference number: 5 (lower is better)
Translates to: QSNGGCLLRFNKHQISLFHSEQR*LLWSSP
Trigger: CGGGGACGACCAAAGAAGCAACCTCTGCTCACTGTG...GAAGAGAGAAATCTGGTGCTTATTAAACCTCAAGAGACATCCACCATTTGATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR CAA 90 bp CTTTTGAGGCATTTCAGCTCCCGCCACTCCCCCTCTATGCTACAGTTGGCATTTAGTGTCTTCATCTTGTaGATCGTTTTGATGGTCTTC +
Preference number: 5 (lower is better)
Translates to: LLRHFSSRHSPSMLQLAFSVFIL*IVLMVF
Trigger: GAAGACCATCAAAACGATCAACAAGATGAAGACACT...AAATGCCAACTGTAGCATAGAGGGGGAGTGGCGGGAGCTGAAATGCCTCAAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR CAA 90 bp AGGTTTAGATTCTATAAGCCTTCTGTAGGAAGGTTTAGATTCTATAAGCCTTCTGTCTCTGGGGGAGCTTaGGCCTTTAGGGCCACGCTG +
Preference number: 5 (lower is better)
Translates to: RFRFYKPSVGRFRFYKPSVSGGA*AFRATL
Trigger: CAGCGTGGCCCTAAAGGCCAAAGCTCCCCCAGAGAC...AGAAGGCTTATAGAATCTAAACCTTCCTACAGAAGGCTTATAGAATCTAAACCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR CAA 90 bp AGGTTTAGATTCTATAAGCCTTCTGTAGGAAGGTTTAGATTCTATAAGCCTTCTCTGGCGGGGCTCAGGTaGCCATTGGACCCACCTAAC +
Preference number: 5 (lower is better)
Translates to: RFRFYKPSVGRFRFYKPSLAGLR*PLDPPN
Trigger: GTTAGGTGGGTCCAATGGCAACCTGAGCCCCGCCAG...AGAAGGCTTATAGAATCTAAACCTTCCTACAGAAGGCTTATAGAATCTAAACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR CAA 90 bp CAATCAAATGGTGGATGTCTCTTGAGGTTTAATAAGCACCAGATTTCTCTCTTCCGGCCTCGCCTCTTCTaGACAAAGTTGTTGCCCGTC +
Preference number: 5 (lower is better)
Translates to: QSNGGCLLRFNKHQISLFRPRLF*TKLLPV
Trigger: GACGGGCAACAACTTTGTCAAGAAGAGGCGAGGCCG...GAAGAGAGAAATCTGGTGCTTATTAAACCTCAAGAGACATCCACCATTTGATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS GCA 90 bp AGTGCTTTCTCCGGAACGATTTTCTCCACCACAGCTTTAATAGACTaGCTCTTTTTCCTCTTATGGTTGCTTGGATCCAGAGAAGGTGTC +
Preference number: 5 (lower is better)
Translates to: SAFSGTIFSTTALID*LFFLLWLLGSREGV
Trigger: GACACCTTCTCTGGATCCAAGCAACCATAAGAGGAAAAAGAGGCAGTCTATTAAAGCTGTGGTGGAGAAAATCGTTCCGGAGAAAGCACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR CAA 90 bp CAGAGGGAGCCTTGCTTTGTGGAAAGAAACGTGAAGAAACACCAAGAAGATGCTTCTTCCTTAGTCGCTTaGCTATTTTTCCCAGTACGG +
Preference number: 5 (lower is better)
Translates to: QREPCFVERNVKKHQEDASSLVA*LFFPVR
Trigger: CCGTACTGGGAAAAATAGCAAAGCGACTAAGGAAGA...AGCATCTTCTTGGTGTTTCTTCACGTTTCTTTCCACAAAGCAAGGCTCCCTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR CAA 90 bp GAGATCCTGTGTTCTGATGTGATAATGCAGTTTCTTAGCTGGTCTCAACTTTCTATTTCGCTCATGGGTTaGTCCTCTCCGGGCACTAAC +
Preference number: 5 (lower is better)
Translates to: EILCSDVIMQFLSWSQLSISLMG*SSPGTN
Trigger: GTTAGTGCCCGGAGAGGACAAACCCATGAGCGAAAT...AGAAAGTTGAGACCAGCTAAGAAACTGCATTATCACATCAGAACACAGGATCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR CAA 90 bp TCTGCTTATGATACATCATCCTCTACTAGAATTCTGTCACCACTTGCTTATCATTCGGAGGTGCTGTTGTaGTCTGTCCCGATGCCACTG +
Preference number: 5 (lower is better)
Translates to: SAYDTSSSTRILSPLAYHSEVLL*SVPMPL
Trigger: CAGTGGCATCGGGACAGACAACAACAGCACCTCCGA...ATGATAAGCAAGTGGTGACAGAATTCTAGTAGAGGATGATGTATCATAAGCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR CAA 90 bp TATGATCTGCTTATGATACATCATCCTCTACTAGAATTCTGTCACCACTTGCTTTGGTCGGAGGTGCTGTaGTTGTCTGTCCCGATGCCA +
Preference number: 5 (lower is better)
Translates to: YDLLMIHHPLLEFCHHLLWSEVL*LSVPMP
Trigger: TGGCATCGGGACAGACAACAACAGCACCTCCGACCA...AAGCAAGTGGTGACAGAATTCTAGTAGAGGATGATGTATCATAAGCAGATCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR CAA 90 bp AGTATAAAAATAACCTGGCTGACACTTGGGTCGACATATCCATCGGCTGCTCTGTTTGTCATGGTGTCATaGGTTTTTGCAGGCCTACCA +
Preference number: 5 (lower is better)
Translates to: SIKITWLTLGSTYPSAALFVMVS*VFAGLP
Trigger: TGGTAGGCCTGCAAAAACCAATGACACCATGACAAA...CAGAGCAGCCGATGGATATGTCGACCCAAGTGTCAGCCAGGTTATTTTTATACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR CAA 90 bp GAGTTACTCAGACATGGCTTGGGAGTGACAGATTGGAAATGGCTGTTTAGATTTTGCTTCTGTCTCTCCTaGTGTTTGCTCTTCTCGCTC +
Preference number: 5 (lower is better)
Translates to: ELLRHGLGVTDWKWLFRFCFCLS*CLLFSL
Trigger: GAGCGAGAAGAGCAAACACAAGGAGAGACAGAAGCA...AAATCTAAACAGCCATTTCCAATCTGTCACTCCCAAGCCATGTCTGAGTAACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR CAA 90 bp CAGAGGGAGCCTTGCTTTGTGGAAAGAAACGTGAAGAAACACCAAGAAGATGCTATTCATCTTGAAGGCTaGGATGTCCTTCTCCCTGTA +
Preference number: 5 (lower is better)
Translates to: QREPCFVERNVKKHQEDAIHLEG*DVLLPV
Trigger: TACAGGGAGAAGGACATCCAAGCCTTCAAGATGAAT...AGCATCTTCTTGGTGTTTCTTCACGTTTCTTTCCACAAAGCAAGGCTCCCTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR CAA 90 bp AGACAGATATCCAGGAAGTTCCTTCCTTGGTTGATATGTGCTTCTATGACTGTTTTCCAGCACTGGCATTaGGTCTCTGGAGTCCTCATC +
Preference number: 5 (lower is better)
Translates to: RQISRKFLPWLICASMTVFQHWH*VSGVLI
Trigger: GATGAGGACTCCAGAGACCAAATGCCAGTGCTGGAA...AACAGTCATAGAAGCACATATCAACCAAGGAAGGAACTTCCTGGATATCTGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR CAA 90 bp TGCTACGGTATATTACAGTTTGAGTTTCTAGGCACTGTGATGACATTATCTGTAGGCTTCTGGCCTCTCTaGCTGGGTAGGTCAATGCAC +
Preference number: 5 (lower is better)
Translates to: CYGILQFEFLGTVMTLSVGFWPL*LGRSMH
Trigger: GTGCATTGACCTACCCAGCAAGAGAGGCCAGAAGCC...TACAGATAATGTCATCACAGTGCCTAGAAACTCAAACTGTAATATACCGTAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS TCA 90 bp CATCTTACCCAACTTCGGGACTCGAGGGTCTTTCTTACTTCCCTCTaGGTTGGAAAGTATTCTATTAACAACCTCGCTGCTCATGGAAAT +
Preference number: 5 (lower is better)
Translates to: HLTQLRDSRVFLTSL*VGKYSINNLAAHGN
Trigger: ATTTCCATGAGCAGCGAGGTTGTTAATAGAATACTTTCCAACTCAGAGGGAAGTAAGAAAGACCCTCGAGTCCCGAAGTTGGGTAAGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS CCA 90 bp CACCACAGCTTTAATAGACTGCCTCTTTTTCCTCTTATGGTTGCTTaGATCCAGAGAAGGTGTCTTTATGGGGATAGTAATCCGGACATG +
Preference number: 5 (lower is better)
Translates to: HHSFNRLPLFPLMVA*IQRRCLYGDSNPDM
Trigger: CATGTCCGGATTACTATCCCCATAAAGACACCTTCTCTGGATCCAAGCAACCATAAGAGGAAAAAGAGGCAGTCTATTAAAGCTGTGGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR CAA 90 bp GAGATCCTGTGTTCTGATGTGATAATGCAGTTTCTTAGCTGGTCTCAACTTTCTTTTTACTCTGGGCCTTaGCAAAGGAAGCCACGGGTT +
Preference number: 5 (lower is better)
Translates to: EILCSDVIMQFLSWSQLSFYSGP*QRKPRV
Trigger: AACCCGTGGCTTCCTTTGCAAAGGCCCAGAGTAAAA...AGAAAGTTGAGACCAGCTAAGAAACTGCATTATCACATCAGAACACAGGATCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR CAA 90 bp GAGATCCTGTGTTCTGATGTGATAATGCAGTTTCTTAGCTGGTCTCAACTTTCTTGTACTTCCTCCATCTaGATCTCCCAATGGCTGGAG +
Preference number: 5 (lower is better)
Translates to: EILCSDVIMQFLSWSQLSCTSSI*ISQWLE
Trigger: CTCCAGCCATTGGGAGATCAAGATGGAGGAAGTACA...AGAAAGTTGAGACCAGCTAAGAAACTGCATTATCACATCAGAACACAGGATCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR CAA 90 bp AGACAGATATCCAGGAAGTTCCTTCCTTGGTTGATATGTGCTTCTATGACTGTTTTACTGGACTTCTTCTaGCTACTGAGAGTGGGTGGC +
Preference number: 5 (lower is better)
Translates to: RQISRKFLPWLICASMTVLLDFF*LLRVGG
Trigger: GCCACCCACTCTCAGTAGCAAGAAGAAGTCCAGTAA...AACAGTCATAGAAGCACATATCAACCAAGGAAGGAACTTCCTGGATATCTGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR CAA 90 bp GAGTTACTCAGACATGGCTTGGGAGTGACAGATTGGAAATGGCTGTTTAGATTTTCCTCTTATGGTTGCTaGGATCCAGAGAAGGTGTCT +
Preference number: 5 (lower is better)
Translates to: ELLRHGLGVTDWKWLFRFSSYGC*DPEKVS
Trigger: AGACACCTTCTCTGGATCCAAGCAACCATAAGAGGA...AAATCTAAACAGCCATTTCCAATCTGTCACTCCCAAGCCATGTCTGAGTAACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR CAA 90 bp CAATCAAATGGTGGATGTCTCTTGAGGTTTAATAAGCACCAGATTTCTCTCTTCGCAGAGGTTGCTTCTTaGGTCGTCCCCGCTTCTTTT +
Preference number: 5 (lower is better)
Translates to: QSNGGCLLRFNKHQISLFAEVAS*VVPASF
Trigger: AAAAGAAGCGGGGACGACCAAAGAAGCAACCTCTGC...GAAGAGAGAAATCTGGTGCTTATTAAACCTCAAGAGACATCCACCATTTGATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR CAA 90 bp CGCGTTAAGTGGCAGATCCAGTGTATCTCTACTGAATCTTTTTACTCTTTTGGACTCTTCCGTTTCCTCTaGTGCTTTGGCTTCTTGAGG +
Preference number: 5 (lower is better)
Translates to: RVKWQIQCISTESFYSFGLFRFL*CFGFLR
Trigger: CCTCAAGAAGCCAAAGCACAAGAGGAAACGGAAGAG...TCCAAAAGAGTAAAAAGATTCAGTAGAGATACACTGGATCTGCCACTTAACGCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR CAA 90 bp AGACAGATATCCAGGAAGTTCCTTCCTTGGTTGATATGTGCTTCTATGACTGTTTGGTGTCATTGGTTTTaGCAGGCCTACCACGCTTCT +
Preference number: 5 (lower is better)
Translates to: RQISRKFLPWLICASMTVWCHWF*QAYHAS
Trigger: AGAAGCGTGGTAGGCCTGCAAAAACCAATGACACCA...AACAGTCATAGAAGCACATATCAACCAAGGAAGGAACTTCCTGGATATCTGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR CAA 90 bp GAGATCCTGTGTTCTGATGTGATAATGCAGTTTCTTAGCTGGTCTCAACTTTCTAAGAGACCACTCAGGTaGTCATGGGTCCCTAGGATT +
Preference number: 5 (lower is better)
Translates to: EILCSDVIMQFLSWSQLSKRPLR*SWVPRI
Trigger: AATCCTAGGGACCCATGACAACCTGAGTGGTCTCTT...AGAAAGTTGAGACCAGCTAAGAAACTGCATTATCACATCAGAACACAGGATCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR CAA 90 bp CTAAACTGTACTGAGTTATGTTTCACAATGATTGGGATTCAAAGCCGGTTCCTTCTGCTCAAGTCACCTTaGTCCTTAGCCTGTGTCCAG +
Preference number: 5 (lower is better)
Translates to: LNCTELCFTMIGIQSRFLLLKSP*SLACVQ
Trigger: CTGGACACAGGCTAAGGACAAAGGTGACTTGAGCAG...AAGGAACCGGCTTTGAATCCCAATCATTGTGAAACATAACTCAGTACAGTTTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR CAA 90 bp CTAAACTGTACTGAGTTATGTTTCACAATGATTGGGATTCAAAGCCGGTTCCTTCTTTTAAGTGGGGACTaGGCATCCCTGGAGACATGG +
Preference number: 5 (lower is better)
Translates to: LNCTELCFTMIGIQSRFLLLSGD*ASLETW
Trigger: CCATGTCTCCAGGGATGCCAAGTCCCCACTTAAAAG...AAGGAACCGGCTTTGAATCCCAATCATTGTGAAACATAACTCAGTACAGTTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR CAA 90 bp GAGTTACTCAGACATGGCTTGGGAGTGACAGATTGGAAATGGCTGTTTAGATTTTGCTTTATGGTGATCTaGATCTCAGGTGGGCAGATA +
Preference number: 5 (lower is better)
Translates to: ELLRHGLGVTDWKWLFRFCFMVI*ISGGQI
Trigger: TATCTGCCCACCTGAGATCAAGATCACCATAAAGCA...AAATCTAAACAGCCATTTCCAATCTGTCACTCCCAAGCCATGTCTGAGTAACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR CAA 90 bp CTAAACTGTACTGAGTTATGTTTCACAATGATTGGGATTCAAAGCCGGTTCCTTGCTCTGGGAGGTCCTTaGTACTTCCTCCATCTTGAT +
Preference number: 5 (lower is better)
Translates to: LNCTELCFTMIGIQSRFLALGGP*YFLHLD
Trigger: ATCAAGATGGAGGAAGTACAAAGGACCTCCCAGAGC...AAGGAACCGGCTTTGAATCCCAATCATTGTGAAACATAACTCAGTACAGTTTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR CAA 90 bp CTAAACTGTACTGAGTTATGTTTCACAATGATTGGGATTCAAAGCCGGTTCCTTCGTCTCTTCCTTTTCTaGGTGCCAGGAAACTCTCTG +
Preference number: 5 (lower is better)
Translates to: LNCTELCFTMIGIQSRFLRLFLF*VPGNSL
Trigger: CAGAGAGTTTCCTGGCACCAAGAAAAGGAAGAGACG...AAGGAACCGGCTTTGAATCCCAATCATTGTGAAACATAACTCAGTACAGTTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR CAA 90 bp CAGAGGGAGCCTTGCTTTGTGGAAAGAAACGTGAAGAAACACCAAGAAGATGCTTTGAGTGTCTTCATCTaGTTGATCGTTTTGATGGTC +
Preference number: 5 (lower is better)
Translates to: QREPCFVERNVKKHQEDALSVFI*LIVLMV
Trigger: GACCATCAAAACGATCAACAAGATGAAGACACTCAA...AGCATCTTCTTGGTGTTTCTTCACGTTTCTTTCCACAAAGCAAGGCTCCCTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR CAA 90 bp AGGTTTAGATTCTATAAGCCTTCTGTAGGAAGGTTTAGATTCTATAAGCCTTCTGGAATGGCCTCTGGGTaGTCAAGGGAACAGAAGTCG +
Preference number: 5 (lower is better)
Translates to: RFRFYKPSVGRFRFYKPSGMASG*SREQKS
Trigger: CGACTTCTGTTCCCTTGACAACCCAGAGGCCATTCC...AGAAGGCTTATAGAATCTAAACCTTCCTACAGAAGGCTTATAGAATCTAAACCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR CAA 90 bp CGCGTTAAGTGGCAGATCCAGTGTATCTCTACTGAATCTTTTTACTCTTTTGGAGTGTCCACCTCAAAGTaGTTCTTGGAAACCTTGTGG +
Preference number: 5 (lower is better)
Translates to: RVKWQIQCISTESFYSFGVSTSK*FLETLW
Trigger: CCACAAGGTTTCCAAGAACAACTTTGAGGTGGACAC...TCCAAAAGAGTAAAAAGATTCAGTAGAGATACACTGGATCTGCCACTTAACGCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR CAA 90 bp GAGATCCTGTGTTCTGATGTGATAATGCAGTTTCTTAGCTGGTCTCAACTTTCTTCCTTGCGATTCATCTaGAAGGCTTGGATGTCCTTC +
Preference number: 5 (lower is better)
Translates to: EILCSDVIMQFLSWSQLSSLRFI*KAWMSF
Trigger: GAAGGACATCCAAGCCTTCAAGATGAATCGCAAGGA...AGAAAGTTGAGACCAGCTAAGAAACTGCATTATCACATCAGAACACAGGATCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR CAA 90 bp GAGTTACTCAGACATGGCTTGGGAGTGACAGATTGGAAATGGCTGTTTAGATTTGTGAGGAGCTTCTTTTaGGAGTGGTTTCTTTCATCT +
Preference number: 5 (lower is better)
Translates to: ELLRHGLGVTDWKWLFRFVRSFF*EWFLSS
Trigger: AGATGAAAGAAACCACTCCAAAAAGAAGCTCCTCAC...AAATCTAAACAGCCATTTCCAATCTGTCACTCCCAAGCCATGTCTGAGTAACTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR CAA 90 bp TATGATCTGCTTATGATACATCATCCTCTACTAGAATTCTGTCACCACTTGCTTGGTCATACTGAAGTGTaGAGTGTTTCTGGGGCCTCT +
Preference number: 5 (lower is better)
Translates to: YDLLMIHHPLLEFCHHLLGHTEV*SVSGAS
Trigger: AGAGGCCCCAGAAACACTCAACACTTCAGTATGACC...AAGCAAGTGGTGACAGAATTCTAGTAGAGGATGATGTATCATAAGCAGATCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR CAA 90 bp AGACAGATATCCAGGAAGTTCCTTCCTTGGTTGATATGTGCTTCTATGACTGTTTGCTTACGCTTATGTTaGTGTTTCCTCTTGTGGAGC +
Preference number: 5 (lower is better)
Translates to: RQISRKFLPWLICASMTVCLRLC*CFLLWS
Trigger: GCTCCACAAGAGGAAACACAAACATAAGCGTAAGCA...AACAGTCATAGAAGCACATATCAACCAAGGAAGGAACTTCCTGGATATCTGTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR CAA 90 bp AGACAGATATCCAGGAAGTTCCTTCCTTGGTTGATATGTGCTTCTATGACTGTTATCTTGTTGATCGTTTaGATGGTCTTCTTATCCAGC +
Preference number: 5 (lower is better)
Translates to: RQISRKFLPWLICASMTVILLIV*MVFLSS
Trigger: GCTGGATAAGAAGACCATCAAAACGATCAACAAGAT...AACAGTCATAGAAGCACATATCAACCAAGGAAGGAACTTCCTGGATATCTGTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR CAA 90 bp TGCTACGGTATATTACAGTTTGAGTTTCTAGGCACTGTGATGACATTATCTGTATTTAACTCTGAAAAATaGGTTTCAGTGCTGGCGGGG +
Preference number: 5 (lower is better)
Translates to: CYGILQFEFLGTVMTLSVFNSEK*VSVLAG
Trigger: CCCCGCCAGCACTGAAACCAATTTTTCAGAGTTAAA...TACAGATAATGTCATCACAGTGCCTAGAAACTCAAACTGTAATATACCGTAGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR CAA 90 bp TATGATCTGCTTATGATACATCATCCTCTACTAGAATTCTGTCACCACTTGCTTGGAGATCCTGAACACTaGAAACTTGGTGATGAGTTC +
Preference number: 5 (lower is better)
Translates to: YDLLMIHHPLLEFCHHLLGDPEH*KLGDEF
Trigger: GAACTCATCACCAAGTTTCAAGTGTTCAGGATCTCC...AAGCAAGTGGTGACAGAATTCTAGTAGAGGATGATGTATCATAAGCAGATCATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR CAA 90 bp AGGTTTAGATTCTATAAGCCTTCTGTAGGAAGGTTTAGATTCTATAAGCCTTCTCTGTCTGCATTAGAATaGCAATCCACATCTCGTCCT +
Preference number: 5 (lower is better)
Translates to: RFRFYKPSVGRFRFYKPSLSALE*QSTSRP
Trigger: AGGACGAGATGTGGATTGCAATTCTAATGCAGACAG...AGAAGGCTTATAGAATCTAAACCTTCCTACAGAAGGCTTATAGAATCTAAACCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS-3UTR CAA 90 bp AGGTTTAGATTCTATAAGCCTTCTGTAGGAAGGTTTAGATTCTATAAGCCTTCTCTCTTCTTGACAAAGTaGTTGCCCGTCTTTGATTGT +
Preference number: 5 (lower is better)
Translates to: RFRFYKPSVGRFRFYKPSLFLTK*LPVFDC
Trigger: ACAATCAAAGACGGGCAACAACTTTGTCAAGAAGAG...AGAAGGCTTATAGAATCTAAACCTTCCTACAGAAGGCTTATAGAATCTAAACCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS TCA 72 bp GCGGGGGCAGCGGCGGCGCCTCCCGAGCCATGTGGATaGCAGCCTCGATGGTGGCCATCACTGCATCCTGGC +
Preference number: 6 (lower is better)
Translates to: AGAAAAPPEPCG*QPRWWPSLHPG
Trigger: GCCAGGATGCAGTGATGGCCACCATCGAGGCTGTCATCCACATGGCTCGGGAGGCGCCGCCGCTGCCCCCGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS CCA 72 bp GGCCCGAGGCCGGTTCCAGCGCTAGGGGACTCAGGCTaGGCTTCTGGCCTCTCTTGCTGGGTAGGTCAATGC +
Preference number: 6 (lower is better)
Translates to: GPRPVPALGDSG*ASGLSCWVGQC
Trigger: GCATTGACCTACCCAGCAAGAGAGGCCAGAAGCCCAGCCTGAGTCCCCTAGCGCTGGAACCGGCCTCGGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS CCA 72 bp TGGATGACAGCCTCGATGGTGGCCATCACTGCATCCTaGCCCGAGGCCGGTTCCAGCGCTAGGGGACTCAGG +
Preference number: 6 (lower is better)
Translates to: WMTASMVAITAS*PEAGSSARGLR
Trigger: CCTGAGTCCCCTAGCGCTGGAACCGGCCTCGGGCCAGGATGCAGTGATGGCCACCATCGAGGCTGTCATCCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS CCA 72 bp GGGTGCATAGCTGCTGGTGAAGAAGCCACGGGTGACTaGAAGCTGGAAGGCACGGCTGGAACGTCCGGCTGG +
Preference number: 6 (lower is better)
Translates to: GCIAAGEEATGD*KLEGTAGTSGW
Trigger: CCAGCCGGACGTTCCAGCCGTGCCTTCCAGCTTCCAGTCACCCGTGGCTTCTTCACCAGCAGCTATGCACCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS CCA 72 bp CAGAGTGGCCCCGCCCACCTTGGGAGGGTTCAGGGATaGCTGTATGTCACCAAGGCCCATGCCTACGGTTCC +
Preference number: 6 (lower is better)
Translates to: QSGPAHLGRVQG*LYVTKAHAYGS
Trigger: GGAACCGTAGGCATGGGCCTTGGTGACATACAGCCATCCCTGAACCCTCCCAAGGTGGGCGGGGCCACTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS TCA 72 bp TCTCGCTCACCAGCGGCAGCTCTTTGTCGGAACCGCTaGGCCGTTCACTCAGGAGGTGGCTGGAGAAGCCTG +
Preference number: 6 (lower is better)
Translates to: SRSPAAALCRNR*AVHSGGGWRSL
Trigger: CAGGCTTCTCCAGCCACCTCCTGAGTGAACGGCTCAGCGGTTCCGACAAAGAGCTGCCGCTGGTGAGCGAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS CCA 72 bp GACTGGAAGCTGGAAGGCACGGCTGGAACGTCCGGCTaGCTAGACACAGGCCTGGGGTGCTTGATGGCTGTT +
Preference number: 6 (lower is better)
Translates to: DWKLEGTAGTSG*LDTGLGCLMAV
Trigger: AACAGCCATCAAGCACCCCAGGCCTGTGTCTAGCCAGCCGGACGTTCCAGCCGTGCCTTCCAGCTTCCAGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS CAA 72 bp ACATCACTCTCGCTGGCTCGGGACTTCCGTGGCCTTTaGGCCTTCACCTCCTCTTCCTGGGGAAGGGGCTGC +
Preference number: 6 (lower is better)
Translates to: TSLSLARDFRGL*AFTSSSWGRGC
Trigger: GCAGCCCCTTCCCCAGGAAGAGGAGGTGAAGGCCAAAAGGCCACGGAAGTCCCGAGCCAGCGAGAGTGATGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS CAA 90 bp ACGTCCGGCTGGCTAGACACAGGCCTGGGGTGCTTGATGGCTGTTTaGGGTTCCTCGGATGGGGGTGGAAGCTCTGTCCTTGGCTTCCTG +
Preference number: 6 (lower is better)
Translates to: TSGWLDTGLGCLMAV*GSSDGGGSSVLGFL
Trigger: CAGGAAGCCAAGGACAGAGCTTCCACCCCCATCCGAGGAACCCAAAACAGCCATCAAGCACCCCAGGCCTGTGTCTAGCCAGCCGGACGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS TCA 72 bp CAGCCAGGAGCAGGTGGGGATCTGGATGAGGAGCCCTaGAGGAATTCCGACTCACTCCCTCTTTGCCGGCAG +
Preference number: 6 (lower is better)
Translates to: QPGAGGDLDEEP*RNSDSLPLCRQ
Trigger: CTGCCGGCAAAGAGGGAGTGAGTCGGAATTCCTTCAGGGCTCCTCATCCAGATCCCCACCTGCTCCTGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS GCA 72 bp GCTCTGCCGGGCTGGCGATGCCTCTTGAGCACTGTCTaGAGAGTAGGCCTCCCGTTTCCCTTCTGTGGTTTC +
Preference number: 6 (lower is better)
Translates to: ALPGWRCLLSTV*RVGLPFPFCGF
Trigger: GAAACCACAGAAGGGAAACGGGAGGCCTACTCTGCAGACAGTGCTCAAGAGGCATCGCCAGCCCGGCAGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS CCA 72 bp CTGGGCCTTTGCAAAGGAAGCCACGGGTTCAAGAGCTaGGACCTTGCTGGTGCTTGCAGTGTCTCGGCCAGC +
Preference number: 6 (lower is better)
Translates to: LGLCKGSHGFKS*DLAGACSVSAS
Trigger: GCTGGCCGAGACACTGCAAGCACCAGCAAGGTCCCAGCTCTTGAACCCGTGGCTTCCTTTGCAAAGGCCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS CCA 72 bp GATGCTTCTGCCGGTGGCCGTGCCGGTTCTTTGTGCTaGTGTCGGATGGAATGGCCTCTGGGTTGTCAAGGG +
Preference number: 6 (lower is better)
Translates to: DASAGGRAGSLC*CRMEWPLGCQG
Trigger: CCCTTGACAACCCAGAGGCCATTCCATCCGACACCAGCACAAAGAACCGGCACGGCCACCGGCAGAAGCATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS CCA 72 bp GCCGGTTCCAGCGCTAGGGGACTCAGGCTGGGCTTCTaGCCTCTCTTGCTGGGTAGGTCAATGCACTTTTCC +
Preference number: 6 (lower is better)
Translates to: AGSSARGLRLGF*PLLLGRSMHFS
Trigger: GGAAAAGTGCATTGACCTACCCAGCAAGAGAGGCCAGAAGCCCAGCCTGAGTCCCCTAGCGCTGGAACCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS TCA 72 bp TTGCGTGGAACTGGGGTGGTGGCACTGTCGGCCTCATaGAAGGGGATGCTGCTCCGAGTGTGTGTGACAGGT +
Preference number: 6 (lower is better)
Translates to: LRGTGVVALSAS*KGMLLRVCVTG
Trigger: ACCTGTCACACACACTCGGAGCAGCATCCCCTTTCATGAGGCCGACAGTGCCACCACCCCAGTTCCACGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS GCA 72 bp CGTGTGGGTGACGTCATGACCATGGGCGGTTTCCTCTaGTTGGACGCACCTCCGGGGACAATCTTTTCAGCG +
Preference number: 6 (lower is better)
Translates to: RVGDVMTMGGFL*LDAPPGTIFSA
Trigger: CGCTGAAAAGATTGTCCCCGGAGGTGCGTCCAAGCAGAGGAAACCGCCCATGGTCATGACGTCACCCACACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS GCA 72 bp GGGTGCTGGATCTCAGACAGCTTTCCTGATGGAGCGTaGTCTGTGCGTGTGGGTGACGTCATGACCATGGGC +
Preference number: 6 (lower is better)
Translates to: GCWISDSFPDGA*SVRVGDVMTMG
Trigger: GCCCATGGTCATGACGTCACCCACACGCACAGAGCACGCTCCATCAGGAAAGCTGTCTGAGATCCAGCACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS CCA 72 bp CCGGTGGCCGTGCCGGTTCTTTGTGCTGGTGTCGGATaGAATGGCCTCTGGGTTGTCAAGGGAACAGAAGTC +
Preference number: 6 (lower is better)
Translates to: PVAVPVLCAGVG*NGLWVVKGTEV
Trigger: GACTTCTGTTCCCTTGACAACCCAGAGGCCATTCCATCCGACACCAGCACAAAGAACCGGCACGGCCACCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS CAA 90 bp CGGATTACTGACGGAACTGATGCTCTGCCGGGCTGGCGATGCCTCTaGAGCACTGTCTGCAGAGTAGGCCTCCCGTTTCCCTTCTGTGGT +
Preference number: 6 (lower is better)
Translates to: RITDGTDALPGWRCL*STVCRVGLPFPFCG
Trigger: ACCACAGAAGGGAAACGGGAGGCCTACTCTGCAGACAGTGCTCAAGAGGCATCGCCAGCCCGGCAGAGCATCAGTTCCGTCAGTAATCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS CAA 90 bp CGCCGGGATTCTGAACTCTTCTCTGCTTGGTCGGAGGTGCTGTTGTaGTCTGTCCCGATGCCACTGTCGCTCGGGATAGTCTCCTCGCTG +
Preference number: 6 (lower is better)
Translates to: RRDSELFSAWSEVLL*SVPMPLSLGIVSSL
Trigger: CAGCGAGGAGACTATCCCGAGCGACAGTGGCATCGGGACAGACAACAACAGCACCTCCGACCAAGCAGAGAAGAGTTCAGAATCCCGGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS CAA 90 bp CTCCGCCGGGATTCTGAACTCTTCTCTGCTTGGTCGGAGGTGCTGTaGTTGTCTGTCCCGATGCCACTGTCGCTCGGGATAGTCTCCTCG +
Preference number: 6 (lower is better)
Translates to: LRRDSELFSAWSEVL*LSVPMPLSLGIVSS
Trigger: CGAGGAGACTATCCCGAGCGACAGTGGCATCGGGACAGACAACAACAGCACCTCCGACCAAGCAGAGAAGAGTTCAGAATCCCGGCGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS CAA 90 bp TCTGTGCGTGTGGGTGACGTCATGACCATGGGCGGTTTCCTCTGCTaGGACGCACCTCCGGGGACAATCTTTTCAGCGTTCCCACCTGTT +
Preference number: 6 (lower is better)
Translates to: SVRVGDVMTMGGFLC*DAPPGTIFSAFPPV
Trigger: AACAGGTGGGAACGCTGAAAAGATTGTCCCCGGAGGTGCGTCCAAGCAGAGGAAACCGCCCATGGTCATGACGTCACCCACACGCACAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS CAA 90 bp TGTCTCTCCTTGTGTTTGCTCTTCTCGCTCACCAGCGGCAGCTCTTaGTCGGAACCGCTGAGCCGTTCACTCAGGAGGTGGCTGGAGAAG +
Preference number: 6 (lower is better)
Translates to: CLSLCLLFSLTSGSS*SEPLSRSLRRWLEK
Trigger: CTTCTCCAGCCACCTCCTGAGTGAACGGCTCAGCGGTTCCGACAAAGAGCTGCCGCTGGTGAGCGAGAAGAGCAAACACAAGGAGAGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS CAA 90 bp GAAACCTTGTGGCTGGCCTCCCCGTGCTGGTGCTTCTGTCTCTCCTaGTGTTTGCTCTTCTCGCTCACCAGCGGCAGCTCTTTGTCGGAA +
Preference number: 6 (lower is better)
Translates to: ETLWLASPCWCFCLS*CLLFSLTSGSSLSE
Trigger: TTCCGACAAAGAGCTGCCGCTGGTGAGCGAGAAGAGCAAACACAAGGAGAGACAGAAGCACCAGCACGGGGAGGCCAGCCACAAGGTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS CAA 90 bp TGTGAGGGCTGCTTCCTAGGCCGGCCTCGCCTCTTCTTGACAAAGTaGTTGCCCGTCTTTGATTGTCTCTGCAGCCGCTTGGCCTTCAGG +
Preference number: 6 (lower is better)
Translates to: CEGCFLGRPRLFLTK*LPVFDCLCSRLAFR
Trigger: CCTGAAGGCCAAGCGGCTGCAGAGACAATCAAAGACGGGCAACAACTTTGTCAAGAAGAGGCGAGGCCGGCCTAGGAAGCAGCCCTCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS TCA 72 bp CACTGGCATTTGGTCTCTGGAGTCCTCATCGAACTGTaGGGGCTGCTTCCTAGGCCGGCCTCGCCTCTTCTT +
Preference number: 6 (lower is better)
Translates to: HWHLVSGVLIEL*GLLPRPASPLL
Trigger: AAGAAGAGGCGAGGCCGGCCTAGGAAGCAGCCCTCACAGTTCGATGAGGACTCCAGAGACCAAATGCCAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS GCA 72 bp TGGGGGATGGTACCACACTTCCCAAGAGCAGGTCTTTaGTACTGCTGGACAACTGACTCCAGGCCCCTCCTG +
Preference number: 6 (lower is better)
Translates to: WGMVPHFPRAGL*YCWTTDSRPLL
Trigger: CAGGAGGGGCCTGGAGTCAGTTGTCCAGCAGTAGCAAAGACCTGCTCTTGGGAAGTGTGGTACCATCCCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS GCA 72 bp GCCGGGATTCTGAACTCTTCTCTGCTTGGTCGGAGGTaGTGTTGTTGTCTGTCCCGATGCCACTGTCGCTCG +
Preference number: 6 (lower is better)
Translates to: AGILNSSLLGRR*CCCLSRCHCRS
Trigger: CGAGCGACAGTGGCATCGGGACAGACAACAACAGCACCTCCGACCAAGCAGAGAAGAGTTCAGAATCCCGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS GCA 72 bp TCGTGGGCCAGAAAAGTGTCCACAATGAGATGCTTCTaGCGGTGGCCGTGCCGGTTCTTTGTGCTGGTGTCG +
Preference number: 6 (lower is better)
Translates to: SWARKVSTMRCF*RWPCRFFVLVS
Trigger: CGACACCAGCACAAAGAACCGGCACGGCCACCGGCAGAAGCATCTCATTGTGGACACTTTTCTGGCCCACGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS CCA 72 bp TTCCGGATTACTGACGGAACTGATGCTCTGCCGGGCTaGCGATGCCTCTTGAGCACTGTCTGCAGAGTAGGC +
Preference number: 6 (lower is better)
Translates to: FRITDGTDALPG*RCLLSTVCRVG
Trigger: GCCTACTCTGCAGACAGTGCTCAAGAGGCATCGCCAGCCCGGCAGAGCATCAGTTCCGTCAGTAATCCGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS CAA 72 bp ATAGATGCTGCCCCAGGACTAGTCTCTGGGGGAGCTTaGGCCTTTAGGGCCACGCTGCTGGAACAGGACAAG +
Preference number: 6 (lower is better)
Translates to: IDAAPGLVSGGA*AFRATLLEQDK
Trigger: CTTGTCCTGTTCCAGCAGCGTGGCCCTAAAGGCCAAAGCTCCCCCAGAGACTAGTCCTGGGGCAGCATCTAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS CAA 72 bp TGGCTAGACACAGGCCTGGGGTGCTTGATGGCTGTTTaGGGTTCCTCGGATGGGGGTGGAAGCTCTGTCCTT +
Preference number: 6 (lower is better)
Translates to: WLDTGLGCLMAV*GSSDGGGSSVL
Trigger: AAGGACAGAGCTTCCACCCCCATCCGAGGAACCCAAAACAGCCATCAAGCACCCCAGGCCTGTGTCTAGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS CAA 72 bp TTGTGTTTGCTCTTCTCGCTCACCAGCGGCAGCTCTTaGTCGGAACCGCTGAGCCGTTCACTCAGGAGGTGG +
Preference number: 6 (lower is better)
Translates to: LCLLFSLTSGSS*SEPLSRSLRRW
Trigger: CCACCTCCTGAGTGAACGGCTCAGCGGTTCCGACAAAGAGCTGCCGCTGGTGAGCGAGAAGAGCAAACACAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS CAA 72 bp GACAGCGTAGACAGGGTGTCCACCTCAAAGTTGTTCTaGGAAACCTTGTGGCTGGCCTCCCCGTGCTGGTGC +
Preference number: 6 (lower is better)
Translates to: DSVDRVSTSKLF*ETLWLASPCWC
Trigger: GCACCAGCACGGGGAGGCCAGCCACAAGGTTTCCAAGAACAACTTTGAGGTGGACACCCTGTCTACGCTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS CAA 90 bp CCGTGCCGGTTCTTTGTGCTGGTGTCGGATGGAATGGCCTCTGGGTaGTCAAGGGAACAGAAGTCGAAAGAGTACCTCCGCCGGGATTCT +
Preference number: 6 (lower is better)
Translates to: PCRFFVLVSDGMASG*SREQKSKEYLRRDS
Trigger: AGAATCCCGGCGGAGGTACTCTTTCGACTTCTGTTCCCTTGACAACCCAGAGGCCATTCCATCCGACACCAGCACAAAGAACCGGCACGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS CAA 90 bp TGGGCGTCAGAAAGTGACAGCGTAGACAGGGTGTCCACCTCAAAGTaGTTCTTGGAAACCTTGTGGCTGGCCTCCCCGTGCTGGTGCTTC +
Preference number: 6 (lower is better)
Translates to: WASESDSVDRVSTSK*FLETLWLASPCWCF
Trigger: GAAGCACCAGCACGGGGAGGCCAGCCACAAGGTTTCCAAGAACAACTTTGAGGTGGACACCCTGTCTACGCTGTCACTTTCTGACGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS CAA 90 bp GAGGGCTGCTTCCTAGGCCGGCCTCGCCTCTTCTTGACAAAGTTGTaGCCCGTCTTTGATTGTCTCTGCAGCCGCTTGGCCTTCAGGATT +
Preference number: 6 (lower is better)
Translates to: EGCFLGRPRLFLTKL*PVFDCLCSRLAFRI
Trigger: AATCCTGAAGGCCAAGCGGCTGCAGAGACAATCAAAGACGGGCAACAACTTTGTCAAGAAGAGGCGAGGCCGGCCTAGGAAGCAGCCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS TCA 72 bp CGGCCTCATGAAAGGGGATGCTGCTCCGAGTGTGTGTaGCAGGTACAGAGGAGCCGGGTACTGACCATAGTA +
Preference number: 6 (lower is better)
Translates to: RPHERGCCSECV*QVQRSRVLTIV
Trigger: TACTATGGTCAGTACCCGGCTCCTCTGTACCTGTCACACACACTCGGAGCAGCATCCCCTTTCATGAGGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS GCA 72 bp GTGTTTCTGGGGCCTCTCGTATGCCTGTGTCTGAAATaGTTTGAGGTCGCTGGCTGTAGGGTCACCGGCTGT +
Preference number: 6 (lower is better)
Translates to: VFLGPLVCLCLK*FEVAGCRVTGC
Trigger: ACAGCCGGTGACCCTACAGCCAGCGACCTCAAAGCATTTCAGACACAGGCATACGAGAGGCCCCAGAAACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS GCA 72 bp AAAGTGTCCACAATGAGATGCTTCTGCCGGTGGCCGTaGCGGTTCTTTGTGCTGGTGTCGGATGGAATGGCC +
Preference number: 6 (lower is better)
Translates to: KVSTMRCFCRWP*RFFVLVSDGMA
Trigger: GGCCATTCCATCCGACACCAGCACAAAGAACCGGCACGGCCACCGGCAGAAGCATCTCATTGTGGACACTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS GCA 72 bp AGGCTTTCGTGGGCCAGAAAAGTGTCCACAATGAGATaGTTCTGCCGGTGGCCGTGCCGGTTCTTTGTGCTG +
Preference number: 6 (lower is better)
Translates to: RLSWARKVSTMR*FCRWPCRFFVL
Trigger: CAGCACAAAGAACCGGCACGGCCACCGGCAGAAGCATCTCATTGTGGACACTTTTCTGGCCCACGAAAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS GCA 72 bp TACGCTTATGTTTGTGTTTCCTCTTGTGGAGCCTACTaGTGGACAGAGTGGCCCCGCCCACCTTGGGAGGGT +
Preference number: 6 (lower is better)
Translates to: YAYVCVSSCGAY*WTEWPRPPWEG
Trigger: ACCCTCCCAAGGTGGGCGGGGCCACTCTGTCCAGCAGTAGGCTCCACAAGAGGAAACACAAACATAAGCGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS CCA 72 bp CCAGGTCCCACCGTGGATTCCCTTCTGGGTTTTGGTTaGAAGAGCACTGATGGGCTGGAGGTTCGGCATAGT +
Preference number: 6 (lower is better)
Translates to: PGPTVDSLLGFG*KSTDGLEVRHS
Trigger: ACTATGCCGAACCTCCAGCCCATCAGTGCTCTTCCAACCAAAACCCAGAAGGGAATCCACGGTGGGACCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS CCA 72 bp GAGTACCTCCGCCGGGATTCTGAACTCTTCTCTGCTTaGTCGGAGGTGCTGTTGTTGTCTGTCCCGATGCCA +
Preference number: 6 (lower is better)
Translates to: EYLRRDSELFSA*SEVLLLSVPMP
Trigger: TGGCATCGGGACAGACAACAACAGCACCTCCGACCAAGCAGAGAAGAGTTCAGAATCCCGGCGGAGGTACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS CCA 72 bp GCCAGAAAAGTGTCCACAATGAGATGCTTCTGCCGGTaGCCGTGCCGGTTCTTTGTGCTGGTGTCGGATGGA +
Preference number: 6 (lower is better)
Translates to: ARKVSTMRCFCR*PCRFFVLVSDG
Trigger: TCCATCCGACACCAGCACAAAGAACCGGCACGGCCACCGGCAGAAGCATCTCATTGTGGACACTTTTCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS CCA 72 bp ATGTCACCAAGGCCCATGCCTACGGTTCCCTGCAAGTaGACGCCATGCTTGGCTTTATGTTTCGTTGCCCCG +
Preference number: 6 (lower is better)
Translates to: MSPRPMPTVPCK*TPCLALCFVAP
Trigger: CGGGGCAACGAAACATAAAGCCAAGCATGGCGTCCACTTGCAGGGAACCGTAGGCATGGGCCTTGGTGACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS CCA 72 bp GCTTATGTTTGTGTTTCCTCTTGTGGAGCCTACTGCTaGACAGAGTGGCCCCGCCCACCTTGGGAGGGTTCA +
Preference number: 6 (lower is better)
Translates to: AYVCVSSCGAYC*TEWPRPPWEGS
Trigger: TGAACCCTCCCAAGGTGGGCGGGGCCACTCTGTCCAGCAGTAGGCTCCACAAGAGGAAACACAAACATAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS CAA 72 bp GACAGGGTGTCCACCTCAAAGTTGTTCTTGGAAACCTaGTGGCTGGCCTCCCCGTGCTGGTGCTTCTGTCTC +
Preference number: 6 (lower is better)
Translates to: DRVSTSKLFLET*WLASPCWCFCL
Trigger: GAGACAGAAGCACCAGCACGGGGAGGCCAGCCACAAGGTTTCCAAGAACAACTTTGAGGTGGACACCCTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS CAA 72 bp TTCCTAGGCCGGCCTCGCCTCTTCTTGACAAAGTTGTaGCCCGTCTTTGATTGTCTCTGCAGCCGCTTGGCC +
Preference number: 6 (lower is better)
Translates to: FLGRPRLFLTKL*PVFDCLCSRLA
Trigger: GGCCAAGCGGCTGCAGAGACAATCAAAGACGGGCAACAACTTTGTCAAGAAGAGGCGAGGCCGGCCTAGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS CAA 90 bp GACAGCGTAGACAGGGTGTCCACCTCAAAGTTGTTCTTGGAAACCTaGTGGCTGGCCTCCCCGTGCTGGTGCTTCTGTCTCTCCTTGTGT +
Preference number: 6 (lower is better)
Translates to: DSVDRVSTSKLFLET*WLASPCWCFCLSLC
Trigger: ACACAAGGAGAGACAGAAGCACCAGCACGGGGAGGCCAGCCACAAGGTTTCCAAGAACAACTTTGAGGTGGACACCCTGTCTACGCTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS CAA 90 bp TCATCGAACTGTGAGGGCTGCTTCCTAGGCCGGCCTCGCCTCTTCTaGACAAAGTTGTTGCCCGTCTTTGATTGTCTCTGCAGCCGCTTG +
Preference number: 6 (lower is better)
Translates to: SSNCEGCFLGRPRLF*TKLLPVFDCLCSRL
Trigger: CAAGCGGCTGCAGAGACAATCAAAGACGGGCAACAACTTTGTCAAGAAGAGGCGAGGCCGGCCTAGGAAGCAGCCCTCACAGTTCGATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS TCA 72 bp GTTGAGTGTTTCTGGGGCCTCTCGTATGCCTGTGTCTaGAATGCTTTGAGGTCGCTGGCTGTAGGGTCACCG +
Preference number: 6 (lower is better)
Translates to: VECFWGLSYACV*NALRSLAVGSP
Trigger: CGGTGACCCTACAGCCAGCGACCTCAAAGCATTTCAGACACAGGCATACGAGAGGCCCCAGAAACACTCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS TCA 72 bp GAAGCCCTGGGAGTGACCTGGGTCATACTGAAGTGTTaGGTGTTTCTGGGGCCTCTCGTATGCCTGTGTCTG +
Preference number: 6 (lower is better)
Translates to: EALGVTWVILKC*VFLGPLVCLCL
Trigger: CAGACACAGGCATACGAGAGGCCCCAGAAACACTCAACACTTCAGTATGACCCAGGTCACTCCCAGGGCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS GCA 72 bp TTGCCATTGGACCCACCTAACTGTGTTGAGAGTGGGTaGATAGCTGCTGGTGAAGAAGCCACGGGTGACTGG +
Preference number: 6 (lower is better)
Translates to: LPLDPPNCVESG*IAAGEEATGDW
Trigger: CCAGTCACCCGTGGCTTCTTCACCAGCAGCTATGCACCCACTCTCAACACAGTTAGGTGGGTCCAATGGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS GCA 72 bp CTGCTCAAGTCACCTTTGTCCTTAGCCTGTGTCCAGTaGTGGGCGTCAGAAAGTGACAGCGTAGACAGGGTG +
Preference number: 6 (lower is better)
Translates to: LLKSPLSLACVQ*WASESDSVDRV
Trigger: CACCCTGTCTACGCTGTCACTTTCTGACGCCCAGCACTGGACACAGGCTAAGGACAAAGGTGACTTGAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS GCA 72 bp ATTTGGTCTCTGGAGTCCTCATCGAACTGTGAGGGCTaGTTCCTAGGCCGGCCTCGCCTCTTCTTGACAAAG +
Preference number: 6 (lower is better)
Translates to: IWSLESSSNCEG*FLGRPRLFLTK
Trigger: CTTTGTCAAGAAGAGGCGAGGCCGGCCTAGGAAGCAGCCCTCACAGTTCGATGAGGACTCCAGAGACCAAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS GCA 72 bp GGCTGGGCTTCTGGCCTCTCTTGCTGGGTAGGTCAATaGACTTTTCCAGCACTGGCATTTGGTCTCTGGAGT +
Preference number: 6 (lower is better)
Translates to: GWASGLSCWVGQ*TFPALAFGLWS
Trigger: ACTCCAGAGACCAAATGCCAGTGCTGGAAAAGTGCATTGACCTACCCAGCAAGAGAGGCCAGAAGCCCAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS CCA 72 bp GACCTTGCTGGTGCTTGCAGTGTCTCGGCCAGCCTCTaGACTGATGAAGCAATTCTGAGTAGCTGGTCCACT +
Preference number: 6 (lower is better)
Translates to: DLAGACSVSASL*TDEAILSSWST
Trigger: AGTGGACCAGCTACTCAGAATTGCTTCATCAGTCCAGAGGCTGGCCGAGACACTGCAAGCACCAGCAAGGTC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS CCA 72 bp AGTAAGACTGTCCGTGTTGGTGTACAGAGGGCTGGATaGGGTAATGGGGTAAGCAGACGGTGGCTCCACCAT +
Preference number: 6 (lower is better)
Translates to: SKTVRVGVQRAG*GNGVSRRWLHH
Trigger: ATGGTGGAGCCACCGTCTGCTTACCCCATTACCCCATCCAGCCCTCTGTACACCAACACGGACAGTCTTACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS CCA 72 bp CTCAAGTCACCTTTGTCCTTAGCCTGTGTCCAGTGCTaGGCGTCAGAAAGTGACAGCGTAGACAGGGTGTCC +
Preference number: 6 (lower is better)
Translates to: LKSPLSLACVQC*ASESDSVDRVS
Trigger: GGACACCCTGTCTACGCTGTCACTTTCTGACGCCCAGCACTGGACACAGGCTAAGGACAAAGGTGACTTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS CCA 72 bp CTAGGGGACTCAGGCTGGGCTTCTGGCCTCTCTTGCTaGGTAGGTCAATGCACTTTTCCAGCACTGGCATTT +
Preference number: 6 (lower is better)
Translates to: LGDSGWASGLSC*VGQCTFPALAF
Trigger: AAATGCCAGTGCTGGAAAAGTGCATTGACCTACCCAGCAAGAGAGGCCAGAAGCCCAGCCTGAGTCCCCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS CAA 72 bp TCTGAACTCTTCTCTGCTTGGTCGGAGGTGCTGTTGTaGTCTGTCCCGATGCCACTGTCGCTCGGGATAGTC +
Preference number: 6 (lower is better)
Translates to: SELFSAWSEVLL*SVPMPLSLGIV
Trigger: GACTATCCCGAGCGACAGTGGCATCGGGACAGACAACAACAGCACCTCCGACCAAGCAGAGAAGAGTTCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS CAA 72 bp CGGGTGCTGAGGGAATCGCAACACTGTCCACTGCAGTaGGCTTCTTCCTGGCCATCATGGCAGATATTGAGC +
Preference number: 6 (lower is better)
Translates to: RVLRESQHCPLQ*ASSWPSWQILS
Trigger: GCTCAATATCTGCCATGATGGCCAGGAAGAAGCCAACTGCAGTGGACAGTGTTGCGATTCCCTCAGCACCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS CAA 72 bp TGCTTCCTAGGCCGGCCTCGCCTCTTCTTGACAAAGTaGTTGCCCGTCTTTGATTGTCTCTGCAGCCGCTTG +
Preference number: 6 (lower is better)
Translates to: CFLGRPRLFLTK*LPVFDCLCSRL
Trigger: CAAGCGGCTGCAGAGACAATCAAAGACGGGCAACAACTTTGTCAAGAAGAGGCGAGGCCGGCCTAGGAAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS CAA 90 bp GCGGTAGCTAAGACTGCCTCTCGAAGCATAGCCGGAGGTTTGGCCTaGCTACACCTCCTTTTTGCAGCAAACTTGGGGTGCTGGATCTCA +
Preference number: 6 (lower is better)
Translates to: AVAKTASRSIAGGLA*LHLLFAANLGCWIS
Trigger: TGAGATCCAGCACCCCAAGTTTGCTGCAAAAAGGAGGTGTAGCAAGGCCAAACCTCCGGCTATGCTTCGAGAGGCAGTCTTAGCTACCGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS CAA 90 bp TCAGAAAGTGACAGCGTAGACAGGGTGTCCACCTCAAAGTTGTTCTaGGAAACCTTGTGGCTGGCCTCCCCGTGCTGGTGCTTCTGTCTC +
Preference number: 6 (lower is better)
Translates to: SESDSVDRVSTSKLF*ETLWLASPCWCFCL
Trigger: GAGACAGAAGCACCAGCACGGGGAGGCCAGCCACAAGGTTTCCAAGAACAACTTTGAGGTGGACACCCTGTCTACGCTGTCACTTTCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS CAA 90 bp GAGATAACACGGGTGCTGAGGGAATCGCAACACTGTCCACTGCAGTaGGCTTCTTCCTGGCCATCATGGCAGATATTGAGCCCTCGCTCT +
Preference number: 6 (lower is better)
Translates to: EITRVLRESQHCPLQ*ASSWPSWQILSPRS
Trigger: AGAGCGAGGGCTCAATATCTGCCATGATGGCCAGGAAGAAGCCAACTGCAGTGGACAGTGTTGCGATTCCCTCAGCACCCGTGTTATCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS TCA 72 bp GTCCTTAGCCTGTGTCCAGTGCTGGGCGTCAGAAAGTaGCAGCGTAGACAGGGTGTCCACCTCAAAGTTGTT +
Preference number: 6 (lower is better)
Translates to: VLSLCPVLGVRK*QRRQGVHLKVV
Trigger: AACAACTTTGAGGTGGACACCCTGTCTACGCTGTCACTTTCTGACGCCCAGCACTGGACACAGGCTAAGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS GCA 72 bp GCCTTGCTACACCTCCTTTTTGCAGCAAACTTGGGGTaGTGGATCTCAGACAGCTTTCCTGATGGAGCGTGC +
Preference number: 6 (lower is better)
Translates to: ALLHLLFAANLG*WISDSFPDGAC
Trigger: GCACGCTCCATCAGGAAAGCTGTCTGAGATCCAGCACCCCAAGTTTGCTGCAAAAAGGAGGTGTAGCAAGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS GCA 72 bp AGGCCCATGCCTACGGTTCCCTGCAAGTGGACGCCATaGTTGGCTTTATGTTTCGTTGCCCCGGATATCTTT +
Preference number: 6 (lower is better)
Translates to: RPMPTVPCKWTP*LALCFVAPDIF
Trigger: AAAGATATCCGGGGCAACGAAACATAAAGCCAAGCATGGCGTCCACTTGCAGGGAACCGTAGGCATGGGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS GCA 72 bp GGCTGTATGTCACCAAGGCCCATGCCTACGGTTCCCTaGAAGTGGACGCCATGCTTGGCTTTATGTTTCGTT +
Preference number: 6 (lower is better)
Translates to: GCMSPRPMPTVP*KWTPCLALCFV
Trigger: AACGAAACATAAAGCCAAGCATGGCGTCCACTTGCAGGGAACCGTAGGCATGGGCCTTGGTGACATACAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS CCA 72 bp TATCTTTACATGAGAACTTGCGTGGAACTGGGGTGGTaGCACTGTCGGCCTCATGAAAGGGGATGCTGCTCC +
Preference number: 6 (lower is better)
Translates to: YLYMRTCVELGW*HCRPHERGCCS
Trigger: GGAGCAGCATCCCCTTTCATGAGGCCGACAGTGCCACCACCCCAGTTCCACGCAAGTTCTCATGTAAAGATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS CCA 72 bp GGATATCTTTACATGAGAACTTGCGTGGAACTGGGGTaGTGGCACTGTCGGCCTCATGAAAGGGGATGCTGC +
Preference number: 6 (lower is better)
Translates to: GYLYMRTCVELG*WHCRPHERGCC
Trigger: GCAGCATCCCCTTTCATGAGGCCGACAGTGCCACCACCCCAGTTCCACGCAAGTTCTCATGTAAAGATATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS CCA 72 bp CACTGTCCACTGCAGTTGGCTTCTTCCTGGCCATCATaGCAGATATTGAGCCCTCGCTCTTACTGTGTGCTG +
Preference number: 6 (lower is better)
Translates to: HCPLQLASSWPS*QILSPRSYCVL
Trigger: CAGCACACAGTAAGAGCGAGGGCTCAATATCTGCCATGATGGCCAGGAAGAAGCCAACTGCAGTGGACAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS CCA 72 bp CTCTGCAGCCGCTTGGCCTTCAGGATTTTGTTCACGTaGTCCAGGTTCTTCTTGGTGGACAGAAGCTTGGTG +
Preference number: 6 (lower is better)
Translates to: LCSRLAFRILFT*SRFFLVDRSLV
Trigger: CACCAAGCTTCTGTCCACCAAGAAGAACCTGGACCACGTGAACAAAATCCTGAAGGCCAAGCGGCTGCAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS CAA 72 bp AAGACTGCCTCTCGAAGCATAGCCGGAGGTTTGGCCTaGCTACACCTCCTTTTTGCAGCAAACTTGGGGTGC +
Preference number: 6 (lower is better)
Translates to: KTASRSIAGGLA*LHLLFAANLGC
Trigger: GCACCCCAAGTTTGCTGCAAAAAGGAGGTGTAGCAAGGCCAAACCTCCGGCTATGCTTCGAGAGGCAGTCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS CAA 72 bp AGTGCCTTCGTGAATCGTCTCCACAGTGAGCAGAGGTaGCTTCTTTGGTCGTCCCCGCTTCTTTTTGACCGG +
Preference number: 6 (lower is better)
Translates to: SAFVNRLHSEQR*LLWSSPLLFDR
Trigger: CCGGTCAAAAAGAAGCGGGGACGACCAAAGAAGCAACCTCTGCTCACTGTGGAGACGATTCACGAAGGCACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS CAA 72 bp TCTTCCTTGTGCTTACGCTTATGTTTGTGTTTCCTCTaGTGGAGCCTACTGCTGGACAGAGTGGCCCCGCCC +
Preference number: 6 (lower is better)
Translates to: SSLCLRLCLCFL*WSLLLDRVAPP
Trigger: GGGCGGGGCCACTCTGTCCAGCAGTAGGCTCCACAAGAGGAAACACAAACATAAGCGTAAGCACAAGGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS CAA 90 bp ATAGCCGGAGGTTTGGCCTTGCTACACCTCCTTTTTGCAGCAAACTaGGGGTGCTGGATCTCAGACAGCTTTCCTGATGGAGCGTGCTCT +
Preference number: 6 (lower is better)
Translates to: IAGGLALLHLLFAAN*GCWISDSFPDGACS
Trigger: AGAGCACGCTCCATCAGGAAAGCTGTCTGAGATCCAGCACCCCAAGTTTGCTGCAAAAAGGAGGTGTAGCAAGGCCAAACCTCCGGCTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS CAA 90 bp GCTAGTGGAAGTGCCTTCGTGAATCGTCTCCACAGTGAGCAGAGGTaGCTTCTTTGGTCGTCCCCGCTTCTTTTTGACCGGTGTGATCAC +
Preference number: 6 (lower is better)
Translates to: ASGSAFVNRLHSEQR*LLWSSPLLFDRCDH
Trigger: GTGATCACACCGGTCAAAAAGAAGCGGGGACGACCAAAGAAGCAACCTCTGCTCACTGTGGAGACGATTCACGAAGGCACTTCCACTAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS CAA 90 bp ACTAACTGGGCCAATTTAGCCAGATTGCGCCGTCTCTTCCTTTTCTaGGTGCCAGGAAACTCTCTGCTGATTGGGCTGACGGGGCTAGTG +
Preference number: 6 (lower is better)
Translates to: TNWANLARLRRLFLF*VPGNSLLIGLTGLV
Trigger: CACTAGCCCCGTCAGCCCAATCAGCAGAGAGTTTCCTGGCACCAAGAAAAGGAAGAGACGGCGCAATCTGGCTAAATTGGCCCAGTTAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS CAA 90 bp TCATGGGTCCCTAGGATTCGGTCTTCCTTGTGCTTACGCTTATGTTaGTGTTTCCTCTTGTGGAGCCTACTGCTGGACAGAGTGGCCCCG +
Preference number: 6 (lower is better)
Translates to: SWVPRIRSSLCLRLC*CFLLWSLLLDRVAP
Trigger: CGGGGCCACTCTGTCCAGCAGTAGGCTCCACAAGAGGAAACACAAACATAAGCGTAAGCACAAGGAAGACCGAATCCTAGGGACCCATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS CAA 90 bp TGGCTGGAGAAGCCTGTGGCTTTGCCTGCAAAGAGACCACTCAGGTaGTCATGGGTCCCTAGGATTCGGTCTTCCTTGTGCTTACGCTTA +
Preference number: 6 (lower is better)
Translates to: WLEKPVALPAKRPLR*SWVPRIRSSLCLRL
Trigger: TAAGCGTAAGCACAAGGAAGACCGAATCCTAGGGACCCATGACAACCTGAGTGGTCTCTTTGCAGGCAAAGCCACAGGCTTCTCCAGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS CAA 90 bp TACCTTTTAGCACAGGACTCCACAGGCTCACTGCTCAAGTCACCTTaGTCCTTAGCCTGTGTCCAGTGCTGGGCGTCAGAAAGTGACAGC +
Preference number: 6 (lower is better)
Translates to: YLLAQDSTGSLLKSP*SLACVQCWASESDS
Trigger: GCTGTCACTTTCTGACGCCCAGCACTGGACACAGGCTAAGGACAAAGGTGACTTGAGCAGTGAGCCTGTGGAGTCCTGTGCTAAAAGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS TCA 72 bp GGAACAGAAGTCGAAAGAGTACCTCCGCCGGGATTCTaGACTCTTCTCTGCTTGGTCGGAGGTGCTGTTGTT +
Preference number: 6 (lower is better)
Translates to: GTEVERVPPPGF*TLLCLVGGAVV
Trigger: AACAACAGCACCTCCGACCAAGCAGAGAAGAGTTCAGAATCCCGGCGGAGGTACTCTTTCGACTTCTGTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS GCA 72 bp CATAGCCGGAGGTTTGGCCTTGCTACACCTCCTTTTTaGAGCAAACTTGGGGTGCTGGATCTCAGACAGCTT +
Preference number: 6 (lower is better)
Translates to: HSRRFGLATPPF*SKLGVLDLRQL
Trigger: AAGCTGTCTGAGATCCAGCACCCCAAGTTTGCTGCAAAAAGGAGGTGTAGCAAGGCCAAACCTCCGGCTATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS GCA 72 bp CTGAAAAATTGGTTTCAGTGCTGGCGGGGCTCAGGTTaGCATTGGACCCACCTAACTGTGTTGAGAGTGGGT +
Preference number: 6 (lower is better)
Translates to: LKNWFQCWRGSG*HWTHLTVLRVG
Trigger: ACCCACTCTCAACACAGTTAGGTGGGTCCAATGGCAACCTGAGCCCCGCCAGCACTGAAACCAATTTTTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS GCA 72 bp TCCAGCTCTGCCAGAAACTGGAGATCATCGCGGTTTTaGAGGCTCTTCCGTTTCCTCTTGTGCTTTGGCTTC +
Preference number: 6 (lower is better)
Translates to: SSSARNWRSSRF*RLFRFLLCFGF
Trigger: GAAGCCAAAGCACAAGAGGAAACGGAAGAGCCTGCAAAACCGCGATGATCTCCAGTTTCTGGCAGAGCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS GCA 72 bp AAGTTGTTCTTGGAAACCTTGTGGCTGGCCTCCCCGTaGTGGTGCTTCTGTCTCTCCTTGTGTTTGCTCTTC +
Preference number: 6 (lower is better)
Translates to: KLFLETLWLASP*WCFCLSLCLLF
Trigger: GAAGAGCAAACACAAGGAGAGACAGAAGCACCAGCACGGGGAGGCCAGCCACAAGGTTTCCAAGAACAACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS CCA 72 bp GTGAATCGTCTCCACAGTGAGCAGAGGTTGCTTCTTTaGTCGTCCCCGCTTCTTTTTGACCGGTGTGATCAC +
Preference number: 6 (lower is better)
Translates to: VNRLHSEQRLLL*SSPLLFDRCDH
Trigger: GTGATCACACCGGTCAAAAAGAAGCGGGGACGACCAAAGAAGCAACCTCTGCTCACTGTGGAGACGATTCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS CCA 72 bp CTTCCTTTTCTTGGTGCCAGGAAACTCTCTGCTGATTaGGCTGACGGGGCTAGTGGAAGTGCCTTCGTGAAT +
Preference number: 6 (lower is better)
Translates to: LPFLGARKLSAD*ADGASGSAFVN
Trigger: ATTCACGAAGGCACTTCCACTAGCCCCGTCAGCCCAATCAGCAGAGAGTTTCCTGGCACCAAGAAAAGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS CCA 72 bp ATTTCGCTCATGGGTTTGTCCTCTCCGGGCACTAACTaGGCCAATTTAGCCAGATTGCGCCGTCTCTTCCTT +
Preference number: 6 (lower is better)
Translates to: ISLMGLSSPGTN*ANLARLRRLFL
Trigger: AAGGAAGAGACGGCGCAATCTGGCTAAATTGGCCCAGTTAGTGCCCGGAGAGGACAAACCCATGAGCGAAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS CCA 72 bp CCGGTTCTTTGTGCTGGTGTCGGATGGAATGGCCTCTaGGTTGTCAAGGGAACAGAAGTCGAAAGAGTACCT +
Preference number: 6 (lower is better)
Translates to: PVLCAGVGWNGL*VVKGTEVERVP
Trigger: AGGTACTCTTTCGACTTCTGTTCCCTTGACAACCCAGAGGCCATTCCATCCGACACCAGCACAAAGAACCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS CAA 72 bp GCCAATTTAGCCAGATTGCGCCGTCTCTTCCTTTTCTaGGTGCCAGGAAACTCTCTGCTGATTGGGCTGACG +
Preference number: 6 (lower is better)
Translates to: ANLARLRRLFLF*VPGNSLLIGLT
Trigger: CGTCAGCCCAATCAGCAGAGAGTTTCCTGGCACCAAGAAAAGGAAGAGACGGCGCAATCTGGCTAAATTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS CAA 72 bp AAATTGGTTTCAGTGCTGGCGGGGCTCAGGTTGCCATaGGACCCACCTAACTGTGTTGAGAGTGGGTGCATA +
Preference number: 6 (lower is better)
Translates to: KLVSVLAGLRLP*DPPNCVESGCI
Trigger: TATGCACCCACTCTCAACACAGTTAGGTGGGTCCAATGGCAACCTGAGCCCCGCCAGCACTGAAACCAATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS CAA 72 bp TCTGAAAAATTGGTTTCAGTGCTGGCGGGGCTCAGGTaGCCATTGGACCCACCTAACTGTGTTGAGAGTGGG +
Preference number: 6 (lower is better)
Translates to: SEKLVSVLAGLR*PLDPPNCVESG
Trigger: CCCACTCTCAACACAGTTAGGTGGGTCCAATGGCAACCTGAGCCCCGCCAGCACTGAAACCAATTTTTCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS CAA 72 bp TTCTTTGTGCTGGTGTCGGATGGAATGGCCTCTGGGTaGTCAAGGGAACAGAAGTCGAAAGAGTACCTCCGC +
Preference number: 6 (lower is better)
Translates to: FFVLVSDGMASG*SREQKSKEYLR
Trigger: GCGGAGGTACTCTTTCGACTTCTGTTCCCTTGACAACCCAGAGGCCATTCCATCCGACACCAGCACAAAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS CAA 72 bp AGATCATCGCGGTTTTGCAGGCTCTTCCGTTTCCTCTaGTGCTTTGGCTTCTTGAGGCTTTCGTGGGCCAGA +
Preference number: 6 (lower is better)
Translates to: RSSRFCRLFRFL*CFGFLRLSWAR
Trigger: TCTGGCCCACGAAAGCCTCAAGAAGCCAAAGCACAAGAGGAAACGGAAGAGCCTGCAAAACCGCGATGATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS CAA 72 bp TATGTTTCGTTGCCCCGGATATCTTTACATGAGAACTaGCGTGGAACTGGGGTGGTGGCACTGTCGGCCTCA +
Preference number: 6 (lower is better)
Translates to: YVSLPRISLHEN*RGTGVVALSAS
Trigger: TGAGGCCGACAGTGCCACCACCCCAGTTCCACGCAAGTTCTCATGTAAAGATATCCGGGGCAACGAAACATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS CAA 90 bp AACTCTGAAAAATTGGTTTCAGTGCTGGCGGGGCTCAGGTTGCCATaGGACCCACCTAACTGTGTTGAGAGTGGGTGCATAGCTGCTGGT +
Preference number: 6 (lower is better)
Translates to: NSEKLVSVLAGLRLP*DPPNCVESGCIAAG
Trigger: ACCAGCAGCTATGCACCCACTCTCAACACAGTTAGGTGGGTCCAATGGCAACCTGAGCCCCGCCAGCACTGAAACCAATTTTTCAGAGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS CAA 90 bp CTACGGTTCCCTGCAAGTGGACGCCATGCTTGGCTTTATGTTTCGTaGCCCCGGATATCTTTACATGAGAACTTGCGTGGAACTGGGGTG +
Preference number: 6 (lower is better)
Translates to: LRFPASGRHAWLYVS*PRISLHENLRGTGV
Trigger: CACCCCAGTTCCACGCAAGTTCTCATGTAAAGATATCCGGGGCAACGAAACATAAAGCCAAGCATGGCGTCCACTTGCAGGGAACCGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS CAA 90 bp CACTGTCCACTGCAGTTGGCTTCTTCCTGGCCATCATGGCAGATATaGAGCCCTCGCTCTTACTGTGTGCTGCTGTCTGGTCCACTTTTA +
Preference number: 6 (lower is better)
Translates to: HCPLQLASSWPSWQI*SPRSYCVLLSGPLL
Trigger: TAAAAGTGGACCAGACAGCAGCACACAGTAAGAGCGAGGGCTCAATATCTGCCATGATGGCCAGGAAGAAGCCAACTGCAGTGGACAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS CAA 90 bp TTGCCCGTCTTTGATTGTCTCTGCAGCCGCTTGGCCTTCAGGATTTaGTTCACGTGGTCCAGGTTCTTCTTGGTGGACAGAAGCTTGGTG +
Preference number: 6 (lower is better)
Translates to: LPVFDCLCSRLAFRI*FTWSRFFLVDRSLV
Trigger: CACCAAGCTTCTGTCCACCAAGAAGAACCTGGACCACGTGAACAAAATCCTGAAGGCCAAGCGGCTGCAGAGACAATCAAAGACGGGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS CAA 90 bp TCGCGGTTTTGCAGGCTCTTCCGTTTCCTCTTGTGCTTTGGCTTCTaGAGGCTTTCGTGGGCCAGAAAAGTGTCCACAATGAGATGCTTC +
Preference number: 6 (lower is better)
Translates to: SRFCRLFRFLLCFGF*RLSWARKVSTMRCF
Trigger: GAAGCATCTCATTGTGGACACTTTTCTGGCCCACGAAAGCCTCAAGAAGCCAAAGCACAAGAGGAAACGGAAGAGCCTGCAAAACCGCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS CAA 90 bp AGAAACTGGAGATCATCGCGGTTTTGCAGGCTCTTCCGTTTCCTCTaGTGCTTTGGCTTCTTGAGGCTTTCGTGGGCCAGAAAAGTGTCC +
Preference number: 6 (lower is better)
Translates to: RNWRSSRFCRLFRFL*CFGFLRLSWARKVS
Trigger: GGACACTTTTCTGGCCCACGAAAGCCTCAAGAAGCCAAAGCACAAGAGGAAACGGAAGAGCCTGCAAAACCGCGATGATCTCCAGTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS CAA 90 bp GATGAGTTCTTCCAGCTCTGCCAGAAACTGGAGATCATCGCGGTTTaGCAGGCTCTTCCGTTTCCTCTTGTGCTTTGGCTTCTTGAGGCT +
Preference number: 6 (lower is better)
Translates to: DEFFQLCQKLEIIAV*QALPFPLVLWLLEA
Trigger: AGCCTCAAGAAGCCAAAGCACAAGAGGAAACGGAAGAGCCTGCAAAACCGCGATGATCTCCAGTTTCTGGCAGAGCTGGAAGAACTCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS CAA 90 bp GGTGGACAGAAGCTTGGTGTAATGGCACATCTTCCGCACTTCGCATaGGATGGCTTCGATCTCCCGTCTCTTGAATCTCTTCTTCAGGGA +
Preference number: 6 (lower is better)
Translates to: GGQKLGVMAHLPHFA*DGFDLPSLESLLQG
Trigger: TCCCTGAAGAAGAGATTCAAGAGACGGGAGATCGAAGCCATCCAATGCGAAGTGCGGAAGATGTGCCATTACACCAAGCTTCTGTCCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS TCA 72 bp GCCTCGCCTCTTCTTGACAAAGTTGTTGCCCGTCTTTaGTTGTCTCTGCAGCCGCTTGGCCTTCAGGATTTT +
Preference number: 6 (lower is better)
Translates to: ASPLLDKVVARL*LSLQPLGLQDF
Trigger: AAAATCCTGAAGGCCAAGCGGCTGCAGAGACAATCAAAGACGGGCAACAACTTTGTCAAGAAGAGGCGAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS GCA 72 bp TCATCGCGGTTTTGCAGGCTCTTCCGTTTCCTCTTGTaGTTTGGCTTCTTGAGGCTTTCGTGGGCCAGAAAA +
Preference number: 6 (lower is better)
Translates to: SSRFCRLFRFLL*FGFLRLSWARK
Trigger: TTTTCTGGCCCACGAAAGCCTCAAGAAGCCAAAGCACAAGAGGAAACGGAAGAGCCTGCAAAACCGCGATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS CCA 72 bp GCCTCCCGTTTCCCTTCTGTGGTTTCAAATGCTTTCTaGGCACTCTTGACCCAATCCAGATCTGAGTTCGGT +
Preference number: 6 (lower is better)
Translates to: ASRFPSVVSNAF*ALLTQSRSEFG
Trigger: ACCGAACTCAGATCTGGATTGGGTCAAGAGTGCCCAGAAAGCATTTGAAACCACAGAAGGGAAACGGGAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS CCA 72 bp GTTTGGCCTTGCTACACCTCCTTTTTGCAGCAAACTTaGGGTGCTGGATCTCAGACAGCTTTCCTGATGGAG +
Preference number: 6 (lower is better)
Translates to: VWPCYTSFLQQT*GAGSQTAFLME
Trigger: CTCCATCAGGAAAGCTGTCTGAGATCCAGCACCCCAAGTTTGCTGCAAAAAGGAGGTGTAGCAAGGCCAAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS CCA 72 bp AGTTGTTGCCCGTCTTTGATTGTCTCTGCAGCCGCTTaGCCTTCAGGATTTTGTTCACGTGGTCCAGGTTCT +
Preference number: 6 (lower is better)
Translates to: SCCPSLIVSAAA*PSGFCSRGPGS
Trigger: AGAACCTGGACCACGTGAACAAAATCCTGAAGGCCAAGCGGCTGCAGAGACAATCAAAGACGGGCAACAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS CAA 72 bp GGTTTGGCCTTGCTACACCTCCTTTTTGCAGCAAACTaGGGGTGCTGGATCTCAGACAGCTTTCCTGATGGA +
Preference number: 6 (lower is better)
Translates to: GLALLHLLFAAN*GCWISDSFPDG
Trigger: TCCATCAGGAAAGCTGTCTGAGATCCAGCACCCCAAGTTTGCTGCAAAAAGGAGGTGTAGCAAGGCCAAACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS CAA 72 bp GTAGCTAAGACTGCCTCTCGAAGCATAGCCGGAGGTTaGGCCTTGCTACACCTCCTTTTTGCAGCAAACTTG +
Preference number: 6 (lower is better)
Translates to: VAKTASRSIAGG*ALLHLLFAANL
Trigger: CAAGTTTGCTGCAAAAAGGAGGTGTAGCAAGGCCAAACCTCCGGCTATGCTTCGAGAGGCAGTCTTAGCTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS CAA 72 bp TGCAGGCTCTTCCGTTTCCTCTTGTGCTTTGGCTTCTaGAGGCTTTCGTGGGCCAGAAAAGTGTCCACAATG +
Preference number: 6 (lower is better)
Translates to: CRLFRFLLCFGF*RLSWARKVSTM
Trigger: CATTGTGGACACTTTTCTGGCCCACGAAAGCCTCAAGAAGCCAAAGCACAAGAGGAAACGGAAGAGCCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS CAA 72 bp TTCCAGCTCTGCCAGAAACTGGAGATCATCGCGGTTTaGCAGGCTCTTCCGTTTCCTCTTGTGCTTTGGCTT +
Preference number: 6 (lower is better)
Translates to: FQLCQKLEIIAV*QALPFPLVLWL
Trigger: AAGCCAAAGCACAAGAGGAAACGGAAGAGCCTGCAAAACCGCGATGATCTCCAGTTTCTGGCAGAGCTGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS CAA 72 bp CTCCTCCTCTTACTCCCACCCATGTCACTGTCCCACTaGTCGCTGGAAGGATTCATTTCACTGAACACATCC +
Preference number: 6 (lower is better)
Translates to: LLLLLPPMSLSH*SLEGFISLNTS
Trigger: GGATGTGTTCAGTGAAATGAATCCTTCCAGCGACAAGTGGGACAGTGACATGGGTGGGAGTAAGAGGAGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS CAA 72 bp AAGTTGTTGCCCGTCTTTGATTGTCTCTGCAGCCGCTaGGCCTTCAGGATTTTGTTCACGTGGTCCAGGTTC +
Preference number: 6 (lower is better)
Translates to: KLLPVFDCLCSR*AFRILFTWSRF
Trigger: GAACCTGGACCACGTGAACAAAATCCTGAAGGCCAAGCGGCTGCAGAGACAATCAAAGACGGGCAACAACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS CAA 90 bp GGAGGACTCATAAGAACCTCTCTCCTTGCGATTCATCTTGAAGGCTaGGATGTCCTTCTCCCTGTACGTCCCAAAGCCTTCAAAGCTCCT +
Preference number: 6 (lower is better)
Translates to: GGLIRTSLLAIHLEG*DVLLPVRPKAFKAP
Trigger: AGGAGCTTTGAAGGCTTTGGGACGTACAGGGAGAAGGACATCCAAGCCTTCAAGATGAATCGCAAGGAGAGAGGTTCTTATGAGTCCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS TCA 72 bp TCCCTTCTGTGGTTTCAAATGCTTTCTGGGCACTCTTaGCCCAATCCAGATCTGAGTTCGGTAGGGTTTGGC +
Preference number: 6 (lower is better)
Translates to: SLLWFQMLSGHS*PNPDLSSVGFG
Trigger: GCCAAACCCTACCGAACTCAGATCTGGATTGGGTCAAGAGTGCCCAGAAAGCATTTGAAACCACAGAAGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS TCA 72 bp TTGGCTTTATGTTTCGTTGCCCCGGATATCTTTACATaGGAACTTGCGTGGAACTGGGGTGGTGGCACTGTC +
Preference number: 6 (lower is better)
Translates to: LALCFVAPDIFT*ELAWNWGGGTV
Trigger: GACAGTGCCACCACCCCAGTTCCACGCAAGTTCTCATGTAAAGATATCCGGGGCAACGAAACATAAAGCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS GCA 72 bp TTTTTCCCAGTACGGGACACCTTCTGGTCCCCAGACTaGTTTATGGTGATCTTGATCTCAGGTGGGCAGATA +
Preference number: 6 (lower is better)
Translates to: FFPVRDTFWSPD*FMVILISGGQI
Trigger: TATCTGCCCACCTGAGATCAAGATCACCATAAAGCAGTCTGGGGACCAGAAGGTGTCCCGTACTGGGAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS GCA 72 bp GACATTAATCTGCTTTCCCAGTTTACTTTCGATAGATaGTGCCCCAGGACTAGTCTCTGGGGGAGCTTTGGC +
Preference number: 6 (lower is better)
Translates to: DINLLSQFTFDR*CPRTSLWGSFG
Trigger: GCCAAAGCTCCCCCAGAGACTAGTCCTGGGGCAGCATCTATCGAAAGTAAACTGGGAAAGCAGATTAATGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS CCA 72 bp AACTTGGTGATGAGTTCTTCCAGCTCTGCCAGAAACTaGAGATCATCGCGGTTTTGCAGGCTCTTCCGTTTC +
Preference number: 6 (lower is better)
Translates to: NLVMSSSSSARN*RSSRFCRLFRF
Trigger: GAAACGGAAGAGCCTGCAAAACCGCGATGATCTCCAGTTTCTGGCAGAGCTGGAAGAACTCATCACCAAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS CAA 72 bp CCTGCAAGTGGACGCCATGCTTGGCTTTATGTTTCGTaGCCCCGGATATCTTTACATGAGAACTTGCGTGGA +
Preference number: 6 (lower is better)
Translates to: PASGRHAWLYVS*PRISLHENLRG
Trigger: TCCACGCAAGTTCTCATGTAAAGATATCCGGGGCAACGAAACATAAAGCCAAGCATGGCGTCCACTTGCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS CAA 72 bp TTTGATTGTCTCTGCAGCCGCTTGGCCTTCAGGATTTaGTTCACGTGGTCCAGGTTCTTCTTGGTGGACAGA +
Preference number: 6 (lower is better)
Translates to: FDCLCSRLAFRI*FTWSRFFLVDR
Trigger: TCTGTCCACCAAGAAGAACCTGGACCACGTGAACAAAATCCTGAAGGCCAAGCGGCTGCAGAGACAATCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS CAA 90 bp GCCTCCCGTTTCCCTTCTGTGGTTTCAAATGCTTTCTGGGCACTCTaGACCCAATCCAGATCTGAGTTCGGTAGGGTTTGGCTTATCATA +
Preference number: 6 (lower is better)
Translates to: ASRFPSVVSNAFWAL*TQSRSEFGRVWLII
Trigger: TATGATAAGCCAAACCCTACCGAACTCAGATCTGGATTGGGTCAAGAGTGCCCAGAAAGCATTTGAAACCACAGAAGGGAAACGGGAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS CAA 90 bp AAGAGACCACTCAGGTTGTCATGGGTCCCTAGGATTCGGTCTTCCTaGTGCTTACGCTTATGTTTGTGTTTCCTCTTGTGGAGCCTACTG +
Preference number: 6 (lower is better)
Translates to: KRPLRLSWVPRIRSS*CLRLCLCFLLWSLL
Trigger: CAGTAGGCTCCACAAGAGGAAACACAAACATAAGCGTAAGCACAAGGAAGACCGAATCCTAGGGACCCATGACAACCTGAGTGGTCTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS CAA 90 bp TTCTTGACAAAGTTGTTGCCCGTCTTTGATTGTCTCTGCAGCCGCTaGGCCTTCAGGATTTTGTTCACGTGGTCCAGGTTCTTCTTGGTG +
Preference number: 6 (lower is better)
Translates to: FLTKLLPVFDCLCSR*AFRILFTWSRFFLV
Trigger: CACCAAGAAGAACCTGGACCACGTGAACAAAATCCTGAAGGCCAAGCGGCTGCAGAGACAATCAAAGACGGGCAACAACTTTGTCAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS GCA 72 bp CTGCAAGTGGACGCCATGCTTGGCTTTATGTTTCGTTaGCCCGGATATCTTTACATGAGAACTTGCGTGGAA +
Preference number: 6 (lower is better)
Translates to: LQVDAMLGFMFR*PGYLYMRTCVE
Trigger: TTCCACGCAAGTTCTCATGTAAAGATATCCGGGGCAACGAAACATAAAGCCAAGCATGGCGTCCACTTGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS GCA 72 bp AGGTTGTCATGGGTCCCTAGGATTCGGTCTTCCTTGTaGTTACGCTTATGTTTGTGTTTCCTCTTGTGGAGC +
Preference number: 6 (lower is better)
Translates to: RLSWVPRIRSSL*LRLCLCFLLWS
Trigger: GCTCCACAAGAGGAAACACAAACATAAGCGTAAGCACAAGGAAGACCGAATCCTAGGGACCCATGACAACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS GCA 72 bp TTCTTGACAAAGTTGTTGCCCGTCTTTGATTGTCTCTaGAGCCGCTTGGCCTTCAGGATTTTGTTCACGTGG +
Preference number: 6 (lower is better)
Translates to: FLTKLLPVFDCL*SRLAFRILFTW
Trigger: CCACGTGAACAAAATCCTGAAGGCCAAGCGGCTGCAGAGACAATCAAAGACGGGCAACAACTTTGTCAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS CCA 72 bp GTCGCTTTGCTATTTTTCCCAGTACGGGACACCTTCTaGTCCCCAGACTGCTTTATGGTGATCTTGATCTCA +
Preference number: 6 (lower is better)
Translates to: VALLFFPVRDTF*SPDCFMVILIS
Trigger: TGAGATCAAGATCACCATAAAGCAGTCTGGGGACCAGAAGGTGTCCCGTACTGGGAAAAATAGCAAAGCGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS CCA 72 bp GCTTGCCAACCTTTTTGTGAAACTTCATTTCGCTCATaGGTTTGTCCTCTCCGGGCACTAACTGGGCCAATT +
Preference number: 6 (lower is better)
Translates to: ACQPFCETSFRS*VCPLRALTGPI
Trigger: AATTGGCCCAGTTAGTGCCCGGAGAGGACAAACCCATGAGCGAAATGAAGTTTCACAAAAAGGTTGGCAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS CCA 72 bp TCAGGATTTTGTTCACGTGGTCCAGGTTCTTCTTGGTaGACAGAAGCTTGGTGTAATGGCACATCTTCCGCA +
Preference number: 6 (lower is better)
Translates to: SGFCSRGPGSSW*TEAWCNGTSSA
Trigger: TGCGGAAGATGTGCCATTACACCAAGCTTCTGTCCACCAAGAAGAACCTGGACCACGTGAACAAAATCCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS CCA 72 bp CCTTCAGGATTTTGTTCACGTGGTCCAGGTTCTTCTTaGTGGACAGAAGCTTGGTGTAATGGCACATCTTCC +
Preference number: 6 (lower is better)
Translates to: PSGFCSRGPGSS*WTEAWCNGTSS
Trigger: GGAAGATGTGCCATTACACCAAGCTTCTGTCCACCAAGAAGAACCTGGACCACGTGAACAAAATCCTGAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS CAA 72 bp TTCCCTTCTGTGGTTTCAAATGCTTTCTGGGCACTCTaGACCCAATCCAGATCTGAGTTCGGTAGGGTTTGG +
Preference number: 6 (lower is better)
Translates to: FPSVVSNAFWAL*TQSRSEFGRVW
Trigger: CCAAACCCTACCGAACTCAGATCTGGATTGGGTCAAGAGTGCCCAGAAAGCATTTGAAACCACAGAAGGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS CAA 72 bp CCTAGGATTCGGTCTTCCTTGTGCTTACGCTTATGTTaGTGTTTCCTCTTGTGGAGCCTACTGCTGGACAGA +
Preference number: 6 (lower is better)
Translates to: PRIRSSLCLRLC*CFLLWSLLLDR
Trigger: TCTGTCCAGCAGTAGGCTCCACAAGAGGAAACACAAACATAAGCGTAAGCACAAGGAAGACCGAATCCTAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS CAA 72 bp CTCAGGTTGTCATGGGTCCCTAGGATTCGGTCTTCCTaGTGCTTACGCTTATGTTTGTGTTTCCTCTTGTGG +
Preference number: 6 (lower is better)
Translates to: LRLSWVPRIRSS*CLRLCLCFLLW
Trigger: CCACAAGAGGAAACACAAACATAAGCGTAAGCACAAGGAAGACCGAATCCTAGGGACCCATGACAACCTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS CAA 72 bp ATAAGAACCTCTCTCCTTGCGATTCATCTTGAAGGCTaGGATGTCCTTCTCCCTGTACGTCCCAAAGCCTTC +
Preference number: 6 (lower is better)
Translates to: IRTSLLAIHLEG*DVLLPVRPKAF
Trigger: GAAGGCTTTGGGACGTACAGGGAGAAGGACATCCAAGCCTTCAAGATGAATCGCAAGGAGAGAGGTTCTTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS CAA 72 bp AAGCTTGGTGTAATGGCACATCTTCCGCACTTCGCATaGGATGGCTTCGATCTCCCGTCTCTTGAATCTCTT +
Preference number: 6 (lower is better)
Translates to: KLGVMAHLPHFA*DGFDLPSLESL
Trigger: AAGAGATTCAAGAGACGGGAGATCGAAGCCATCCAATGCGAAGTGCGGAAGATGTGCCATTACACCAAGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS CAA 90 bp TTGTCATGGTGTCATTGGTTTTTGCAGGCCTACCACGCTTCTTCTTaGACTTCAGGTCTGAAGTCCTACGAAGATAGAGCAATGGGTCGT +
Preference number: 6 (lower is better)
Translates to: LSWCHWFLQAYHASS*TSGLKSYEDRAMGR
Trigger: ACGACCCATTGCTCTATCTTCGTAGGACTTCAGACCTGAAGTCAAAGAAGAAGCGTGGTAGGCCTGCAAAAACCAATGACACCATGACAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS CAA 90 bp TTACCCAACTTCGGGACTCGAGGGTCTTTCTTACTTCCCTCTGAGTaGGAAAGTATTCTATTAACAACCTCGCTGCTCATGGAAATCCCT +
Preference number: 6 (lower is better)
Translates to: LPNFGTRGSFLLPSE*ESILLTTSLLMEIP
Trigger: AGGGATTTCCATGAGCAGCGAGGTTGTTAATAGAATACTTTCCAACTCAGAGGGAAGTAAGAAAGACCCTCGAGTCCCGAAGTTGGGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS TCA 72 bp TATTCTATTAACAACCTCGCTGCTCATGGAAATCCCTaGAGCCAGTGCTTTCTCCGGAACGATTTTCTCCAC +
Preference number: 6 (lower is better)
Translates to: YSINNLAAHGNP*SQCFLRNDFLH
Trigger: GTGGAGAAAATCGTTCCGGAGAAAGCACTGGCTTCAGGGATTTCCATGAGCAGCGAGGTTGTTAATAGAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS TCA 72 bp CAACTTCGGGACTCGAGGGTCTTTCTTACTTCCCTCTaGGTTGGAAAGTATTCTATTAACAACCTCGCTGCT +
Preference number: 6 (lower is better)
Translates to: QLRDSRVFLTSL*VGKYSINNLAA
Trigger: AGCAGCGAGGTTGTTAATAGAATACTTTCCAACTCAGAGGGAAGTAAGAAAGACCCTCGAGTCCCGAAGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS CAA 90 bp TTCTCCACCACAGCTTTAATAGACTGCCTCTTTTTCCTCTTATGGTaGCTTGGATCCAGAGAAGGTGTCTTTATGGGGATAGTAATCCGG +
Preference number: 6 (lower is better)
Translates to: FSTTALIDCLFFLLW*LGSREGVFMGIVIR
Trigger: CCGGATTACTATCCCCATAAAGACACCTTCTCTGGATCCAAGCAACCATAAGAGGAAAAAGAGGCAGTCTATTAAAGCTGTGGTGGAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS TCA 72 bp AGAGAAGGTGTCTTTATGGGGATAGTAATCCGGACATaGCTGGAATCATTTTCCGGATTACTGACGGAACTG +
Preference number: 6 (lower is better)
Translates to: REGVFMGIVIRT*LESFSGLLTEL
Trigger: CAGTTCCGTCAGTAATCCGGAAAATGATTCCAGTCATGTCCGGATTACTATCCCCATAAAGACACCTTCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS GCA 72 bp TCCGGAACGATTTTCTCCACCACAGCTTTAATAGACTaGCTCTTTTTCCTCTTATGGTTGCTTGGATCCAGA +
Preference number: 6 (lower is better)
Translates to: SGTIFSTTALID*LFFLLWLLGSR
Trigger: TCTGGATCCAAGCAACCATAAGAGGAAAAAGAGGCAGTCTATTAAAGCTGTGGTGGAGAAAATCGTTCCGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS CAA 72 bp TTTTTGGAGTGGTTTCTTTCATCTTCCTTAGTCGCTTaGCTATTTTTCCCAGTACGGGACACCTTCTGGTCC +
Preference number: 6 (lower is better)
Translates to: FLEWFLSSSLVA*LFFPVRDTFWS
Trigger: GGACCAGAAGGTGTCCCGTACTGGGAAAAATAGCAAAGCGACTAAGGAAGATGAAAGAAACCACTCCAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS TCA 72 bp GTACTGACCATAGTAACCAAGGTTCATCATAGGCATTaGTGTGTAAGGCATTCCATAGGGTGCATAGTAACT +
Preference number: 6 (lower is better)
Translates to: VLTIVTKVHHRH*CVRHSIGCIVT
Trigger: AGTTACTATGCACCCTATGGAATGCCTTACACATCAATGCCTATGATGAACCTTGGTTACTATGGTCAGTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS CCA 72 bp CCTACGAAGATAGAGCAATGGGTCGTACTGGATATATaGCACCGGGTAATACTGATCAAAGTTAATCCTAAA +
Preference number: 6 (lower is better)
Translates to: PTKIEQWVVLDI*HRVILIKVNPK
Trigger: TTTAGGATTAACTTTGATCAGTATTACCCGGTGCCATATATCCAGTACGACCCATTGCTCTATCTTCGTAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11
CDS CAA 72 bp ACAGCTTTAATAGACTGCCTCTTTTTCCTCTTATGGTaGCTTGGATCCAGAGAAGGTGTCTTTATGGGGATA +
Preference number: 6 (lower is better)
Translates to: TALIDCLFFLLW*LGSREGVFMGI
Trigger: TATCCCCATAAAGACACCTTCTCTGGATCCAAGCAACCATAAGAGGAAAAAGAGGCAGTCTATTAAAGCTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000025430.11