RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SESN3 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000032009

Ensembl transcript IDs: ENSMUST00000034507.9, ENSMUST00000208222.2, ENSMUST00000209187.2

Found 242 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GAAGGAGACCCACAGCCCAGGCCTCAGGACTGTGCCTCAGGCCTCTaGCACACAGATAACCATGTGGGAAATGGGACCTCTGCTTTAGAA +
Preference number: 1 (lower is better)
Translates to: EGDPQPRPQDCASGL*HTDNHVGNGTSALE
Trigger: TTCTAAAGCAGAGGTCCCATTTCCCACATGGTTATCTGTGTGGCAGAGGCCTGAGGCACAGTCCTGAGGCCTGGGCTGTGGGTCTCCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
3UTR TCA 90 bp AGGTTTGCAGGAGCGGAGCCAAGTGGCAAGGCCATGTTCCCAAGGTaGCCTGACATGGTTCTCGTTTACCTTGACCAGCCTGTACGCATG +
Preference number: 1 (lower is better)
Translates to: RFAGAEPSGKAMFPR*PDMVLVYLDQPVRM
Trigger: CATGCGTACAGGCTGGTCAAGGTAAACGAGAACCATGTCAGGTCACCTTGGGAACATGGCCTTGCCACTTGGCTCCGCTCCTGCAAACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
3UTR GCA 90 bp GTGGACACAGGCCGTAGGAGCTTCCACCTTTACAGCAGATGCATTTaGCAAGGACAGCCAGAGTCTCAGCTCTGGGCCTCAAGTGTCCTT +
Preference number: 1 (lower is better)
Translates to: VDTGRRSFHLYSRCI*QGQPESQLWASSVL
Trigger: AAGGACACTTGAGGCCCAGAGCTGAGACTCTGGCTGTCCTTGGCAAATGCATCTGCTGTAAAGGTGGAAGCTCCTACGGCCTGTGTCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
3UTR TCA 90 bp GTGATGATTAGCAGGAGGCTGGTGATGTGCAATTGTGAAAGGCATTaGGATCCAGGCAGACTTGGGAGGGAGGAGTGGGAGCAGTGGCTG +
Preference number: 1 (lower is better)
Translates to: VMISRRLVMCNCERH*DPGRLGREEWEQWL
Trigger: CAGCCACTGCTCCCACTCCTCCCTCCCAAGTCTGCCTGGATCTCAATGCCTTTCACAATTGCACATCACCAGCCTCCTGCTAATCATCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
3UTR TCA 90 bp TGGGCATTGTCAGGTTGGCATGTTCATGCCCAGGATGGACACGTCTaGAGACCATTAGAGACCTCAGATCTACACTCCCAAGCAGGGCAG +
Preference number: 1 (lower is better)
Translates to: WALSGWHVHAQDGHV*RPLETSDLHSQAGQ
Trigger: CTGCCCTGCTTGGGAGTGTAGATCTGAGGTCTCTAATGGTCTTCAGACGTGTCCATCCTGGGCATGAACATGCCAACCTGACAATGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
3UTR TCA 90 bp GACAGCTATACTTTGACACTAGAGAACCGAGTAACTGGTAACTGCTaGGGTGCGTCACAAACGAGTTCTGATGGGAGTCCCGGGCGAGAG +
Preference number: 1 (lower is better)
Translates to: DSYTLTLENRVTGNC*GASQTSSDGSPGRE
Trigger: CTCTCGCCCGGGACTCCCATCAGAACTCGTTTGTGACGCACCTCAGCAGTTACCAGTTACTCGGTTCTCTAGTGTCAAAGTATAGCTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
3UTR GCA 90 bp AGCTACATCCAGTTCTTCCATGATGAGGAACGTTTCTTTCAGGTTTaGAGGAGCGGAGCCAAGTGGCAAGGCCATGTTCCCAAGGTGACC +
Preference number: 1 (lower is better)
Translates to: SYIQFFHDEERFFQV*RSGAKWQGHVPKVT
Trigger: GGTCACCTTGGGAACATGGCCTTGCCACTTGGCTCCGCTCCTGCAAACCTGAAAGAAACGTTCCTCATCATGGAAGAACTGGATGTAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
3UTR CCA 90 bp GAGCGGAGCCAAGTGGCAAGGCCATGTTCCCAAGGTGACCTGACATaGTTCTCGTTTACCTTGACCAGCCTGTACGCATGTCTATTCAAT +
Preference number: 1 (lower is better)
Translates to: ERSQVARPCSQGDLT*FSFTLTSLYACLFN
Trigger: ATTGAATAGACATGCGTACAGGCTGGTCAAGGTAAACGAGAACCATGTCAGGTCACCTTGGGAACATGGCCTTGCCACTTGGCTCCGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
3UTR GCA 90 bp CCTACTTCCTCTCCTGCAGAGACATCCAAATGCAAACAAAATGTCTaGAGGAGATGTAAAATCATCGGGTCACCATCCCTGGTGGCCAGG +
Preference number: 1 (lower is better)
Translates to: PTSSPAETSKCKQNV*RRCKIIGSPSLVAR
Trigger: CCTGGCCACCAGGGATGGTGACCCGATGATTTTACATCTCCTGCAGACATTTTGTTTGCATTTGGATGTCTCTGCAGGAGAGGAAGTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
3UTR GCA 90 bp AGGGCATTATGGGTAACCACCATAGCCTACACTTACAGCAGGGTCTaGTTCGCTAGAACAAGGGTGAAGTGGCTGTTGACAAAGCTTGCT +
Preference number: 1 (lower is better)
Translates to: RALWVTTIAYTYSRV*FARTRVKWLLTKLA
Trigger: AGCAAGCTTTGTCAACAGCCACTTCACCCTTGTTCTAGCGAAGCAGACCCTGCTGTAAGTGTAGGCTATGGTGGTTACCCATAATGCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
3UTR GCA 90 bp GTACCTCTGGTTAGGAGCCTGGCTGGAGGGGAGAAACTGCATTCCTaGCTCAGTACAACATTCTCTTCCTTAATGACACTATCTGGACAT +
Preference number: 1 (lower is better)
Translates to: VPLVRSLAGGEKLHS*LSTTFSSLMTLSGH
Trigger: ATGTCCAGATAGTGTCATTAAGGAAGAGAATGTTGTACTGAGGCAGGAATGCAGTTTCTCCCCTCCAGCCAGGCTCCTAACCAGAGGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
3UTR GCA 90 bp CTAAACCAACACCCCATGATGTGTCCCTCTCAGCGGCCAATCCACTaGCCATCTAGGCCCTTGCTTTACTCTTGGATCTTTAAATGTGTT +
Preference number: 1 (lower is better)
Translates to: LNQHPMMCPSQRPIH*PSRPLLYSWIFKCV
Trigger: AACACATTTAAAGATCCAAGAGTAAAGCAAGGGCCTAGATGGGCAGTGGATTGGCCGCTGAGAGGGACACATCATGGGGTGTTGGTTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
3UTR CCA 90 bp GTTTATAGGCTCTTTAGGGATGAGGTAGAGGACAGCAAGATATTTTaGCAGCCGGCAAGATGGTATAAACAGCAGGGGGTGGACAGGACA +
Preference number: 1 (lower is better)
Translates to: VYRLFRDEVEDSKIF*QPARWYKQQGVDRT
Trigger: TGTCCTGTCCACCCCCTGCTGTTTATACCATCTTGCCGGCTGCCAAAATATCTTGCTGTCCTCTACCTCATCCCTAAAGAGCCTATAAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
3UTR CCA 90 bp AGAAGCTCTCATGGGTTCTGTTATCTTCATAACTGCCGACGCATGTaGAGGGCATTATGGGTAACCACCATAGCCTACACTTACAGCAGG +
Preference number: 1 (lower is better)
Translates to: RSSHGFCYLHNCRRM*RALWVTTIAYTYSR
Trigger: CCTGCTGTAAGTGTAGGCTATGGTGGTTACCCATAATGCCCTCCACATGCGTCGGCAGTTATGAAGATAACAGAACCCATGAGAGCTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
3UTR GCA 90 bp CTTGTCCTTAAAGCACAGCACGAAGTAAAAATCTCATTGGCCTGTTaGAGCACACACCATCTTCATGGGACACACAGGATCTGCCCTCTT +
Preference number: 1 (lower is better)
Translates to: LVLKAQHEVKISLAC*STHHLHGTHRICPL
Trigger: AAGAGGGCAGATCCTGTGTGTCCCATGAAGATGGTGTGTGCTGCAACAGGCCAATGAGATTTTTACTTCGTGCTGTGCTTTAAGGACAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
3UTR GCA 90 bp CGTGCAGTTCAGCTACGGTCTTCATGTGTACATTCATTATGCAGCTaGTCTGCACAATCAGGATTCAGAAGGGCTTTCAAGTTCACCTCC +
Preference number: 1 (lower is better)
Translates to: RAVQLRSSCVHSLCS*SAQSGFRRAFKFTS
Trigger: GGAGGTGAACTTGAAAGCCCTTCTGAATCCTGATTGTGCAGAGCAGCTGCATAATGAATGTACACATGAAGACCGTAGCTGAACTGCACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
3UTR CCA 90 bp CCATCTAGGCCCTTGCTTTACTCTTGGATCTTTAAATGTGTTAACTaGGCATTGTCAGGTTGGCATGTTCATGCCCAGGATGGACACGTC +
Preference number: 1 (lower is better)
Translates to: PSRPLLYSWIFKCVN*ALSGWHVHAQDGHV
Trigger: GACGTGTCCATCCTGGGCATGAACATGCCAACCTGACAATGCCCAGTTAACACATTTAAAGATCCAAGAGTAAAGCAAGGGCCTAGATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
3UTR CCA 90 bp TCTCAGCGGCCAATCCACTGCCCATCTAGGCCCTTGCTTTACTCTTaGATCTTTAAATGTGTTAACTGGGCATTGTCAGGTTGGCATGTT +
Preference number: 1 (lower is better)
Translates to: SQRPIHCPSRPLLYS*IFKCVNWALSGWHV
Trigger: AACATGCCAACCTGACAATGCCCAGTTAACACATTTAAAGATCCAAGAGTAAAGCAAGGGCCTAGATGGGCAGTGGATTGGCCGCTGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
3UTR TCA 90 bp GTCTTACCTAAGCAGGTGGTGTTTTGGACAGGGTTAAATTGGGAGTaGGAGAAGCTGCATTTAGATGCATGGGGTTACAGCTCTGTAGAC +
Preference number: 1 (lower is better)
Translates to: VLPKQVVFWTGLNWE*EKLHLDAWGYSSVD
Trigger: GTCTACAGAGCTGTAACCCCATGCATCTAAATGCAGCTTCTCTCACTCCCAATTTAACCCTGTCCAAAACACCACCTGCTTAGGTAAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
3UTR CCA 90 bp GTCTGCCAGGAATCTCCTGTCCCACTGAAGAGTTATAGGTTAATCTaGACGGTTGGGGAATTTTTACTCTACATTCAAGCCACTGGGTCT +
Preference number: 1 (lower is better)
Translates to: VCQESPVPLKSYRLI*TVGEFLLYIQATGS
Trigger: AGACCCAGTGGCTTGAATGTAGAGTAAAAATTCCCCAACCGTCCAGATTAACCTATAACTCTTCAGTGGGACAGGAGATTCCTGGCAGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
3UTR TCA 90 bp GGACACGTGTGGGATTTTAGAGCGGGAGAGGACACCATTCTTTGCTaGATGTTGCTATCTGAAAAACAACTGCTTGAGCGAATTGTAAGC +
Preference number: 1 (lower is better)
Translates to: GHVWDFRAGEDTILC*MLLSEKQLLERIVS
Trigger: GCTTACAATTCGCTCAAGCAGTTGTTTTTCAGATAGCAACATTCAGCAAAGAATGGTGTCCTCTCCCGCTCTAAAATCCCACACGTGTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
3UTR GCA 90 bp GAGACAACGTCTACATGGAAAGTCATGAAGTTGGCATCTGACTCGTaGAGTTCAGCTACGGTCTTCATGTGTACATTCATTATGCAGCTG +
Preference number: 1 (lower is better)
Translates to: ETTSTWKVMKLASDS*SSATVFMCTFIMQL
Trigger: CAGCTGCATAATGAATGTACACATGAAGACCGTAGCTGAACTGCACGAGTCAGATGCCAACTTCATGACTTTCCATGTAGACGTTGTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
3UTR GCA 90 bp GTTATACATACAAGAAGCTCTCATGGGTTCTGTTATCTTCATAACTaGCGACGCATGTGGAGGGCATTATGGGTAACCACCATAGCCTAC +
Preference number: 1 (lower is better)
Translates to: VIHTRSSHGFCYLHN*RRMWRALWVTTIAY
Trigger: GTAGGCTATGGTGGTTACCCATAATGCCCTCCACATGCGTCGGCAGTTATGAAGATAACAGAACCCATGAGAGCTTCTTGTATGTATAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
3UTR CCA 90 bp GCATTCCTGCCTCAGTACAACATTCTCTTCCTTAATGACACTATCTaGACATACACGAAGAACAGCCAGGGGGAATTGAGACAAAAGCCA +
Preference number: 1 (lower is better)
Translates to: AFLPQYNILFLNDTI*TYTKNSQGELRQKP
Trigger: TGGCTTTTGTCTCAATTCCCCCTGGCTGTTCTTCGTGTATGTCCAGATAGTGTCATTAAGGAAGAGAATGTTGTACTGAGGCAGGAATGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
3UTR CCA 90 bp GCCTACACTTACAGCAGGGTCTGCTTCGCTAGAACAAGGGTGAAGTaGCTGTTGACAAAGCTTGCTATTTTCAGAGTTGAACCTATAAAA +
Preference number: 1 (lower is better)
Translates to: AYTYSRVCFARTRVK*LLTKLAIFRVEPIK
Trigger: TTTTATAGGTTCAACTCTGAAAATAGCAAGCTTTGTCAACAGCCACTTCACCCTTGTTCTAGCGAAGCAGACCCTGCTGTAAGTGTAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
3UTR GCA 90 bp GCTGTATTTTGGGACAGCAGTGAGAATCAGGAAAGAGACAGTCTCTaGTTTATAAAGGAAAAATCTTCCGCCACCCAGCTGATACATTTC +
Preference number: 1 (lower is better)
Translates to: AVFWDSSENQERDSL*FIKEKSSATQLIHF
Trigger: GAAATGTATCAGCTGGGTGGCGGAAGATTTTTCCTTTATAAAGCAGAGACTGTCTCTTTCCTGATTCTCACTGCTGTCCCAAAATACAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
3UTR TCA 90 bp TGTGTGTGTGTGTGTGTAGCAGTCTTCAAGATCATCCACCTTACATaGGTCCAAAGTCACGTGCTTCATAAGGAAATTTACAGCAACAAA +
Preference number: 1 (lower is better)
Translates to: CVCVCVAVFKIIHLT*VQSHVLHKEIYSNK
Trigger: TTTGTTGCTGTAAATTTCCTTATGAAGCACGTGACTTTGGACTCATGTAAGGTGGATGATCTTGAAGACTGCTACACACACACACACACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
3UTR CCA 90 bp TGGAGAAAAGCTTACCCTAACTTTAAACCATACACAATAAGAGACTaGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGCAGTCTTCAAGAT +
Preference number: 1 (lower is better)
Translates to: WRKAYPNFKPYTIRD*CVCVCVCVCSSLQD
Trigger: ATCTTGAAGACTGCTACACACACACACACACACACACACACACCAGTCTCTTATTGTGTATGGTTTAAAGTTAGGGTAAGCTTTTCTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
3UTR TCA 90 bp ATTATTTATTTAAAATATGGACTAGCATTACTGACCAGCAGAGGATaGACCCAGGAGAAGGCTGAGTTTATAGGCTCTTTAGGGATGAGG +
Preference number: 1 (lower is better)
Translates to: IIYLKYGLALLTSRG*TQEKAEFIGSLGMR
Trigger: CCTCATCCCTAAAGAGCCTATAAACTCAGCCTTCTCCTGGGTTCATCCTCTGCTGGTCAGTAATGCTAGTCCATATTTTAAATAAATAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
3UTR-3UTR GCA 90 bp AGCCACCCAGAACTGGCCCCAGCTGCATGGGCACGCAGCTTACTGTGCCCTCTCTGCTTCAGCCACAGGTaGTTTCCCCAGACTCGGGAC +
Preference number: 2 (lower is better)
Translates to: SHPELAPAAWARSLLCPLCFSHR*FPQTRD
Trigger: GTCCCGAGTCTGGGGAAAGCACCTGTGGCTGAAGCA...GAGAGGGCACAGTAAGCTGCGTGCCCATGCAGCTGGGGCCAGTTCTGGGTGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
3UTR CAA 90 bp CTCAGCCTGGATGCACAGCTCCGCTCCAGGCCACCGCACAGCAGCTaGCTCTGCTCTTGGTCTTACCTAAGCAGGTGGTGTTTTGGACAG +
Preference number: 2 (lower is better)
Translates to: LSLDAQLRSRPPHSS*LCSWSYLSRWCFGQ
Trigger: CTGTCCAAAACACCACCTGCTTAGGTAAGACCAAGAGCAGAGCAAGCTGCTGTGCGGTGGCCTGGAGCGGAGCTGTGCATCCAGGCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
3UTR-3UTR GCA 90 bp AGCCACCCAGAACTGGCCCCAGCTGCATGGGCACGCAGCTTACTGTGCCCTCTCAAACCACCATCTTCTTaGCTCAGGCTTTCAAGCACT +
Preference number: 2 (lower is better)
Translates to: SHPELAPAAWARSLLCPLKPPSS*LRLSST
Trigger: AGTGCTTGAAAGCCTGAGGCAAGAAGATGGTGGTTT...GAGAGGGCACAGTAAGCTGCGTGCCCATGCAGCTGGGGCCAGTTCTGGGTGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
3UTR-3UTR CCA 90 bp TGCCCCAAAGCATTCAGACCACTCCCACAGACAAGGGGGCACGCCCACTTTCACGCTGAAGCATGGAGGTaGAGCCGCCTTCACAAATCA +
Preference number: 2 (lower is better)
Translates to: CPKAFRPLPQTRGHAHFHAEAWR*SRLHKS
Trigger: TGATTTGTGAAGGCGGCTCCACCTCCATGCTTCAGC...GTGAAAGTGGGCGTGCCCCCTTGTCTGTGGGAGTGGTCTGAATGCTTTGGGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
3UTR CAA 90 bp TGCACAGCTCCGCTCCAGGCCACCGCACAGCAGCTTGCTCTGCTCTaGGTCTTACCTAAGCAGGTGGTGTTTTGGACAGGGTTAAATTGG +
Preference number: 2 (lower is better)
Translates to: CTAPLQATAQQLALL*VLPKQVVFWTGLNW
Trigger: CCAATTTAACCCTGTCCAAAACACCACCTGCTTAGGTAAGACCAAGAGCAGAGCAAGCTGCTGTGCGGTGGCCTGGAGCGGAGCTGTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
3UTR-3UTR TCA 90 bp AGCCACCCAGAACTGGCCCCAGCTGCATGGGCACGCAGCTTACTGTGCCCTCTCAGATTAGCATGGATGTaGGGAACACAAGTCACCTTT +
Preference number: 2 (lower is better)
Translates to: SHPELAPAAWARSLLCPLRLAWM*GTQVTF
Trigger: AAAGGTGACTTGTGTTCCTCACATCCATGCTAATCT...GAGAGGGCACAGTAAGCTGCGTGCCCATGCAGCTGGGGCCAGTTCTGGGTGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
3UTR-3UTR CCA 90 bp CCACCATCTTCTTGCCTCAGGCTTTCAAGCACTGGGATTATAGGTATGAGTCACGTGCCTGAGATCTCCTaGGGACACAGCGGTGCCGGA +
Preference number: 2 (lower is better)
Translates to: PPSSCLRLSSTGIIGMSHVPEIS*GHSGAG
Trigger: TCCGGCACCGCTGTGTCCCCAGGAGATCTCAGGCAC...GTGACTCATACCTATAATCCCAGTGCTTGAAAGCCTGAGGCAAGAAGATGGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
3UTR-3UTR TCA 90 bp AAAGTCATGAAGTTGGCATCTGACTCGTGCAGTTCAGCTACGGTCTTCATGTGTAACCAGAGCAGTGCCTaGGATCTCCTGGGGACACAG +
Preference number: 2 (lower is better)
Translates to: KVMKLASDSCSSATVFMCNQSSA*DLLGTQ
Trigger: CTGTGTCCCCAGGAGATCTCAGGCACTGCTCTGGTT...ACACATGAAGACCGTAGCTGAACTGCACGAGTCAGATGCCAACTTCATGACTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
3UTR-3UTR TCA 90 bp CCACCATCTTCTTGCCTCAGGCTTTCAAGCACTGGGATTATAGGTATGAGTCACCAAGGAGCAGGGAGTTaGGGGCTTCACAATCAGACG +
Preference number: 2 (lower is better)
Translates to: PPSSCLRLSSTGIIGMSHQGAGS*GLHNQT
Trigger: CGTCTGATTGTGAAGCCCTCAACTCCCTGCTCCTTG...GTGACTCATACCTATAATCCCAGTGCTTGAAAGCCTGAGGCAAGAAGATGGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
3UTR-3UTR GCA 90 bp AATGTGTACCTCTGGTTAGGAGCCTGGCTGGAGGGGAGAAACTGCATTCCTGCCGGGAAATGGGACCTCTaGTTTAGAAGACAAAGTAGC +
Preference number: 2 (lower is better)
Translates to: NVYLWLGAWLEGRNCIPAGKWDL*FRRQSS
Trigger: GCTACTTTGTCTTCTAAAGCAGAGGTCCCATTTCCC...GGCAGGAATGCAGTTTCTCCCCTCCAGCCAGGCTCCTAACCAGAGGTACACATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
3UTR-3UTR CCA 90 bp TGCCCCAAAGCATTCAGACCACTCCCACAGACAAGGGGGCACGCCCACTTTCACCCAAATAGATTTTTCTaGGGAAAGAATGCTTTGGCT +
Preference number: 2 (lower is better)
Translates to: CPKAFRPLPQTRGHAHFHPNRFF*GKNALA
Trigger: AGCCAAAGCATTCTTTCCCCAGAAAAATCTATTTGG...GTGAAAGTGGGCGTGCCCCCTTGTCTGTGGGAGTGGTCTGAATGCTTTGGGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
3UTR-3UTR CCA 90 bp AATGTGTACCTCTGGTTAGGAGCCTGGCTGGAGGGGAGAAACTGCATTCCTGCCCAGGCTTTCAAGCACTaGGATTATAGGTATGAGTCA +
Preference number: 2 (lower is better)
Translates to: NVYLWLGAWLEGRNCIPAQAFKH*DYRYES
Trigger: TGACTCATACCTATAATCCCAGTGCTTGAAAGCCTG...GGCAGGAATGCAGTTTCTCCCCTCCAGCCAGGCTCCTAACCAGAGGTACACATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
3UTR-3UTR CCA 90 bp GAGAAACTGCATTCCTGCCTCAGTACAACATTCTCTTCCTTAATGACACTATCTACAGCCACCCAGAACTaGCCCCAGCTGCATGGGCAC +
Preference number: 2 (lower is better)
Translates to: EKLHSCLSTTFSSLMTLSTATQN*PQLHGH
Trigger: GTGCCCATGCAGCTGGGGCCAGTTCTGGGTGGCTGT...AGATAGTGTCATTAAGGAAGAGAATGTTGTACTGAGGCAGGAATGCAGTTTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
3UTR-3UTR TCA 90 bp ACAAGAAGCTCTCATGGGTTCTGTTATCTTCATAACTGCCGACGCATGTGGAGGCAGCCCAATCTCTACTaGCATTTCTGGGGCAACACA +
Preference number: 2 (lower is better)
Translates to: TRSSHGFCYLHNCRRMWRQPNLY*HFWGNT
Trigger: TGTGTTGCCCCAGAAATGTCAGTAGAGATTGGGCTG...CCTCCACATGCGTCGGCAGTTATGAAGATAACAGAACCCATGAGAGCTTCTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
3UTR-3UTR GCA 90 bp ACAAGAAGCTCTCATGGGTTCTGTTATCTTCATAACTGCCGACGCATGTGGAGGACTACCTCATTTGTCTaGCAGGAATCTCCTGTCCCA +
Preference number: 2 (lower is better)
Translates to: TRSSHGFCYLHNCRRMWRTTSFV*QESPVP
Trigger: TGGGACAGGAGATTCCTGGCAGACAAATGAGGTAGT...CCTCCACATGCGTCGGCAGTTATGAAGATAACAGAACCCATGAGAGCTTCTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
3UTR-3UTR CCA 90 bp CCACCATCTTCTTGCCTCAGGCTTTCAAGCACTGGGATTATAGGTATGAGTCACACACAGATAACCATGTaGGAAATGGGACCTCTGCTT +
Preference number: 2 (lower is better)
Translates to: PPSSCLRLSSTGIIGMSHTQITM*EMGPLL
Trigger: AAGCAGAGGTCCCATTTCCCACATGGTTATCTGTGT...GTGACTCATACCTATAATCCCAGTGCTTGAAAGCCTGAGGCAAGAAGATGGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
3UTR-3UTR CCA 90 bp CCACCATCTTCTTGCCTCAGGCTTTCAAGCACTGGGATTATAGGTATGAGTCACTCTGTAGAAGCTCCCTaGATGACTTACTGTGACAGA +
Preference number: 2 (lower is better)
Translates to: PPSSCLRLSSTGIIGMSHSVEAP*MTYCDR
Trigger: TCTGTCACAGTAAGTCATCCAGGGAGCTTCTACAGA...GTGACTCATACCTATAATCCCAGTGCTTGAAAGCCTGAGGCAAGAAGATGGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
3UTR CAA 90 bp CACTCACAACTTAAGGAGACAACGTCTACATGGAAAGTCATGAAGTaGGCATCTGACTCGTGCAGTTCAGCTACGGTCTTCATGTGTACA +
Preference number: 2 (lower is better)
Translates to: HSQLKETTSTWKVMK*ASDSCSSATVFMCT
Trigger: TGTACACATGAAGACCGTAGCTGAACTGCACGAGTCAGATGCCAACTTCATGACTTTCCATGTAGACGTTGTCTCCTTAAGTTGTGAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
3UTR-3UTR GCA 90 bp ACAAGAAGCTCTCATGGGTTCTGTTATCTTCATAACTGCCGACGCATGTGGAGGCATTCATTATGCAGCTaGTCTGCACAATCAGGATTC +
Preference number: 2 (lower is better)
Translates to: TRSSHGFCYLHNCRRMWRHSLCS*SAQSGF
Trigger: GAATCCTGATTGTGCAGAGCAGCTGCATAATGAATG...CCTCCACATGCGTCGGCAGTTATGAAGATAACAGAACCCATGAGAGCTTCTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
3UTR-3UTR TCA 90 bp CCACCATCTTCTTGCCTCAGGCTTTCAAGCACTGGGATTATAGGTATGAGTCACCACAGTAAAGAAATGTaGCGGTCATTTCTTTATGGC +
Preference number: 2 (lower is better)
Translates to: PPSSCLRLSSTGIIGMSHHSKEM*RSFLYG
Trigger: GCCATAAAGAAATGACCGTCACATTTCTTTACTGTG...GTGACTCATACCTATAATCCCAGTGCTTGAAAGCCTGAGGCAAGAAGATGGTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
3UTR-3UTR TCA 90 bp ACAAGAAGCTCTCATGGGTTCTGTTATCTTCATAACTGCCGACGCATGTGGAGGTGGACAGGACACATTTaGTGCTGTAATATATTTGGT +
Preference number: 2 (lower is better)
Translates to: TRSSHGFCYLHNCRRMWRWTGHI*CCNIFG
Trigger: ACCAAATATATTACAGCATCAAATGTGTCCTGTCCA...CCTCCACATGCGTCGGCAGTTATGAAGATAACAGAACCCATGAGAGCTTCTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
3UTR-3UTR CCA 90 bp GCAAGTTTCTTTCTTATTCCCCACAAGACAGTCCTTTTCATAGAGGATGAGAGCATGAAAGTCTTAGCATaGGGCATTACCCCTGTGCTT +
Preference number: 2 (lower is better)
Translates to: ASFFLIPHKTVLFIEDESMKVLA*GITPVL
Trigger: AAGCACAGGGGTAATGCCCCATGCTAAGACTTTCAT...GCTCTCATCCTCTATGAAAAGGACTGTCTTGTGGGGAATAAGAAAGAAACTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
3UTR-3UTR TCA 90 bp GAGAAACTGCATTCCTGCCTCAGTACAACATTCTCTTCCTTAATGACACTATCTTGGATAAAGATGGGTTaGCAGCAAATTCTCACAGCA +
Preference number: 2 (lower is better)
Translates to: EKLHSCLSTTFSSLMTLSWIKMG*QQILTA
Trigger: TGCTGTGAGAATTTGCTGTCAACCCATCTTTATCCA...AGATAGTGTCATTAAGGAAGAGAATGTTGTACTGAGGCAGGAATGCAGTTTCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
3UTR-3UTR GCA 90 bp GAGAAACTGCATTCCTGCCTCAGTACAACATTCTCTTCCTTAATGACACTATCTTTTCTGGGGAAAGAATaGTTTGGCTTGGTGAAACCA +
Preference number: 2 (lower is better)
Translates to: EKLHSCLSTTFSSLMTLSFLGKE*FGLVKP
Trigger: TGGTTTCACCAAGCCAAAGCATTCTTTCCCCAGAAA...AGATAGTGTCATTAAGGAAGAGAATGTTGTACTGAGGCAGGAATGCAGTTTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
3UTR-3UTR CCA 90 bp GAGAAACTGCATTCCTGCCTCAGTACAACATTCTCTTCCTTAATGACACTATCTGTGCAAAGAAACATTTaGTTGGAGTTGTGGGTACCA +
Preference number: 2 (lower is better)
Translates to: EKLHSCLSTTFSSLMTLSVQRNI*LELWVP
Trigger: TGGTACCCACAACTCCAACCAAATGTTTCTTTGCAC...AGATAGTGTCATTAAGGAAGAGAATGTTGTACTGAGGCAGGAATGCAGTTTCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
3UTR-3UTR TCA 90 bp TTTAAGGCCCAAACACCACCAATCAAACTGTTGTCTAAAACACTACCTCATTTGAGACTTGAAGGGTGTTaGGGAAAGACATGTTTTAAC +
Preference number: 2 (lower is better)
Translates to: FKAQTPPIKLLSKTLPHLRLEGC*GKTCFN
Trigger: GTTAAAACATGTCTTTCCTCAACACCCTTCAAGTCT...CAAATGAGGTAGTGTTTTAGACAACAGTTTGATTGGTGGTGTTTGGGCCTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
3UTR-3UTR CCA 90 bp GCAAGTTTCTTTCTTATTCCCCACAAGACAGTCCTTTTCATAGAGGATGAGAGCCCAGTTCATGATTTATaGTCAGATCTGAAAATCCAA +
Preference number: 2 (lower is better)
Translates to: ASFFLIPHKTVLFIEDESPVHDL*SDLKIQ
Trigger: TTGGATTTTCAGATCTGACCATAAATCATGAACTGG...GCTCTCATCCTCTATGAAAAGGACTGTCTTGTGGGGAATAAGAAAGAAACTTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
3UTR-3UTR CCA 90 bp GCAAGTTTCTTTCTTATTCCCCACAAGACAGTCCTTTTCATAGAGGATGAGAGCCTCATAATTTTACTTTaGTGTGGCATAAAGTCTAGG +
Preference number: 2 (lower is better)
Translates to: ASFFLIPHKTVLFIEDESLIILL*CGIKSR
Trigger: CCTAGACTTTATGCCACACCAAAGTAAAATTATGAG...GCTCTCATCCTCTATGAAAAGGACTGTCTTGTGGGGAATAAGAAAGAAACTTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
3UTR-3UTR TCA 90 bp TTCACAAATCAACTTTTTGAGGCTGGTTCACTTAGGTTCATAAGTACATTGCTGAGATGGATGGAGCTATaGAGTGAAACTGTTTCTAAC +
Preference number: 2 (lower is better)
Translates to: FTNQLFEAGSLRFISTLLRWMEL*SETVSN
Trigger: GTTAGAAACAGTTTCACTTCATAGCTCCATCCATCT...CAGCAATGTACTTATGAACCTAAGTGAACCAGCCTCAAAAAGTTGATTTGTGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
3UTR-3UTR CCA 90 bp GAGAAACTGCATTCCTGCCTCAGTACAACATTCTCTTCCTTAATGACACTATCTACTAAGAATGCTTATTaGGATCATCTTGCAAGTTTC +
Preference number: 2 (lower is better)
Translates to: EKLHSCLSTTFSSLMTLSTKNAY*DHLASF
Trigger: GAAACTTGCAAGATGATCCCAATAAGCATTCTTAGT...AGATAGTGTCATTAAGGAAGAGAATGTTGTACTGAGGCAGGAATGCAGTTTCTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
3UTR-3UTR GCA 90 bp TTCACAAATCAACTTTTTGAGGCTGGTTCACTTAGGTTCATAAGTACATTGCTGATTTCTAAACAGCATTaGACTGTTTTGTTGTTGCTC +
Preference number: 2 (lower is better)
Translates to: FTNQLFEAGSLRFISTLLISKQH*TVLLLL
Trigger: GAGCAACAACAAAACAGTGCAATGCTGTTTAGAAAT...CAGCAATGTACTTATGAACCTAAGTGAACCAGCCTCAAAAAGTTGATTTGTGAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
3UTR CCA 72 bp TCCACTGAGAGCAGGGCAGTGACAGCCACCCAGAACTaGCCCCAGCTGCATGGGCACGCAGCTTACTGTGCC +
Preference number: 3 (lower is better)
Translates to: STESRAVTATQN*PQLHGHAAYCA
Trigger: GGCACAGTAAGCTGCGTGCCCATGCAGCTGGGGCCAGTTCTGGGTGGCTGTCACTGCCCTGCTCTCAGTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
3UTR CCA 72 bp CAGATTAACCAAACCAGAGCAGTGCCTGAGATCTCCTaGGGACACAGCGGTGCCGGAGAAGGAGGGGCTTGC +
Preference number: 3 (lower is better)
Translates to: QINQTRAVPEIS*GHSGAGEGGAC
Trigger: GCAAGCCCCTCCTTCTCCGGCACCGCTGTGTCCCCAGGAGATCTCAGGCACTGCTCTGGTTTGGTTAATCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
3UTR GCA 72 bp CAGCTCCGCTCCAGGCCACCGCACAGCAGCTTGCTCTaGTCTTGGTCTTACCTAAGCAGGTGGTGTTTTGGA +
Preference number: 3 (lower is better)
Translates to: QLRSRPPHSSLL*SWSYLSRWCFG
Trigger: TCCAAAACACCACCTGCTTAGGTAAGACCAAGAGCAGAGCAAGCTGCTGTGCGGTGGCCTGGAGCGGAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
3UTR CCA 72 bp CGCTCCAGGCCACCGCACAGCAGCTTGCTCTGCTCTTaGTCTTACCTAAGCAGGTGGTGTTTTGGACAGGGT +
Preference number: 3 (lower is better)
Translates to: RSRPPHSSLLCS*SYLSRWCFGQG
Trigger: ACCCTGTCCAAAACACCACCTGCTTAGGTAAGACCAAGAGCAGAGCAAGCTGCTGTGCGGTGGCCTGGAGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
3UTR TCA 72 bp GGAGCGGAGCCAAGTGGCAAGGCCATGTTCCCAAGGTaGCCTGACATGGTTCTCGTTTACCTTGACCAGCCT +
Preference number: 3 (lower is better)
Translates to: GAEPSGKAMFPR*PDMVLVYLDQP
Trigger: AGGCTGGTCAAGGTAAACGAGAACCATGTCAGGTCACCTTGGGAACATGGCCTTGCCACTTGGCTCCGCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
3UTR CCA 72 bp CAGCCACAGGTGCTTTCCCCAGACTCGGGACACGTGTaGGATTTTAGAGCGGGAGAGGACACCATTCTTTGC +
Preference number: 3 (lower is better)
Translates to: QPQVLSPDSGHV*DFRAGEDTILC
Trigger: GCAAAGAATGGTGTCCTCTCCCGCTCTAAAATCCCACACGTGTCCCGAGTCTGGGGAAAGCACCTGTGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
3UTR TCA 72 bp AGCAGGAGGCTGGTGATGTGCAATTGTGAAAGGCATTaGGATCCAGGCAGACTTGGGAGGGAGGAGTGGGAG +
Preference number: 3 (lower is better)
Translates to: SRRLVMCNCERH*DPGRLGREEWE
Trigger: CTCCCACTCCTCCCTCCCAAGTCTGCCTGGATCTCAATGCCTTTCACAATTGCACATCACCAGCCTCCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
3UTR GCA 72 bp CAGTGTAAGGAAGTCAGATTAACCAAACCAGAGCAGTaGCTGAGATCTCCTGGGGACACAGCGGTGCCGGAG +
Preference number: 3 (lower is better)
Translates to: QCKEVRLTKPEQ*LRSPGDTAVPE
Trigger: CTCCGGCACCGCTGTGTCCCCAGGAGATCTCAGGCACTGCTCTGGTTTGGTTAATCTGACTTCCTTACACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
3UTR-3UTR CAA 90 bp AATGTGTACCTCTGGTTAGGAGCCTGGCTGGAGGGGAGAAACTGCATTCCTGCCACAAGGAGCAGGGAGTaGAGGGCTTCACAATCAGAC +
Preference number: 3 (lower is better)
Translates to: NVYLWLGAWLEGRNCIPATRSRE*RASQSD
Trigger: GTCTGATTGTGAAGCCCTCAACTCCCTGCTCCTTGT...GGCAGGAATGCAGTTTCTCCCCTCCAGCCAGGCTCCTAACCAGAGGTACACATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
3UTR-3UTR CAA 90 bp AATGTGTACCTCTGGTTAGGAGCCTGGCTGGAGGGGAGAAACTGCATTCCTGCCGCTTTTCACACACATTaGCACGCTTATGTTTGGCAC +
Preference number: 3 (lower is better)
Translates to: NVYLWLGAWLEGRNCIPAAFHTH*HAYVWH
Trigger: GTGCCAAACATAAGCGTGCAAATGTGTGTGAAAAGC...GGCAGGAATGCAGTTTCTCCCCTCCAGCCAGGCTCCTAACCAGAGGTACACATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
3UTR GCA 72 bp TGGGTAACCACCATAGCCTACACTTACAGCAGGGTCTaGTTCGCTAGAACAAGGGTGAAGTGGCTGTTGACA +
Preference number: 3 (lower is better)
Translates to: WVTTIAYTYSRV*FARTRVKWLLT
Trigger: TGTCAACAGCCACTTCACCCTTGTTCTAGCGAAGCAGACCCTGCTGTAAGTGTAGGCTATGGTGGTTACCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
3UTR CCA 72 bp CATCTACATGTGAATGTGTACCTCTGGTTAGGAGCCTaGCTGGAGGGGAGAAACTGCATTCCTGCCTCAGTA +
Preference number: 3 (lower is better)
Translates to: HLHVNVYLWLGA*LEGRNCIPASV
Trigger: TACTGAGGCAGGAATGCAGTTTCTCCCCTCCAGCCAGGCTCCTAACCAGAGGTACACATTCACATGTAGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
3UTR-3UTR CAA 90 bp TGCCCCAAAGCATTCAGACCACTCCCACAGACAAGGGGGCACGCCCACTTTCACGGGTTACTTTTGCAATaGTTAGCAATGTTAAGCATC +
Preference number: 3 (lower is better)
Translates to: CPKAFRPLPQTRGHAHFHGLLLQ*LAMLSI
Trigger: GATGCTTAACATTGCTAACAATTGCAAAAGTAACCC...GTGAAAGTGGGCGTGCCCCCTTGTCTGTGGGAGTGGTCTGAATGCTTTGGGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
3UTR TCA 72 bp ACTTTGACACTAGAGAACCGAGTAACTGGTAACTGCTaGGGTGCGTCACAAACGAGTTCTGATGGGAGTCCC +
Preference number: 3 (lower is better)
Translates to: TLTLENRVTGNC*GASQTSSDGSP
Trigger: GGGACTCCCATCAGAACTCGTTTGTGACGCACCTCAGCAGTTACCAGTTACTCGGTTCTCTAGTGTCAAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
3UTR TCA 72 bp GCCCTCTCTAAGAGGGGTTGGCTTCCTGCTTGCTGGTaGGGTACCACTAAGAATGCTTATTGGGATCATCTT +
Preference number: 3 (lower is better)
Translates to: ALSKRGWLPACW*GTTKNAYWDHL
Trigger: AAGATGATCCCAATAAGCATTCTTAGTGGTACCTCACCAGCAAGCAGGAAGCCAACCCCTCTTAGAGAGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
3UTR CCA 72 bp AATCTCATTGGCCTGTTGCAGCACACACCATCTTCATaGGACACACAGGATCTGCCCTCTTTTCCTTGCCTT +
Preference number: 3 (lower is better)
Translates to: NLIGLLQHTPSS*DTQDLPSFPCL
Trigger: AAGGCAAGGAAAAGAGGGCAGATCCTGTGTGTCCCATGAAGATGGTGTGTGCTGCAACAGGCCAATGAGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
3UTR CCA 72 bp GTAGAGGACAGCAAGATATTTTGGCAGCCGGCAAGATaGTATAAACAGCAGGGGGTGGACAGGACACATTTG +
Preference number: 3 (lower is better)
Translates to: VEDSKIFWQPAR*YKQQGVDRTHL
Trigger: CAAATGTGTCCTGTCCACCCCCTGCTGTTTATACCATCTTGCCGGCTGCCAAAATATCTTGCTGTCCTCTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
3UTR-3UTR CAA 90 bp AGGCTGGCCTCAAAACCACCATCTTCTTGCCTCAGGCTTTCAAGCACTGGGATTTGTGCAAAGAAACATTaGGTTGGAGTTGTGGGTACC +
Preference number: 3 (lower is better)
Translates to: RLASKPPSSCLRLSSTGICAKKH*VGVVGT
Trigger: GGTACCCACAACTCCAACCAAATGTTTCTTTGCACA...AATCCCAGTGCTTGAAAGCCTGAGGCAAGAAGATGGTGGTTTTGAGGCCAGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
3UTR-3UTR CAA 90 bp ACAAGAAGCTCTCATGGGTTCTGTTATCTTCATAACTGCCGACGCATGTGGAGGGCCAAGATGCTGTGTTaGCTACCCTCTGATTCACAG +
Preference number: 3 (lower is better)
Translates to: TRSSHGFCYLHNCRRMWRAKMLC*LPSDSQ
Trigger: CTGTGAATCAGAGGGTAGCAAACACAGCATCTTGGC...CCTCCACATGCGTCGGCAGTTATGAAGATAACAGAACCCATGAGAGCTTCTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
3UTR-3UTR CAA 90 bp AATGTGTACCTCTGGTTAGGAGCCTGGCTGGAGGGGAGAAACTGCATTCCTGCCGATGCTGTAATATATTaGGTAACAGAGATGGACGGT +
Preference number: 3 (lower is better)
Translates to: NVYLWLGAWLEGRNCIPADAVIY*VTEMDG
Trigger: ACCGTCCATCTCTGTTACCAAATATATTACAGCATC...GGCAGGAATGCAGTTTCTCCCCTCCAGCCAGGCTCCTAACCAGAGGTACACATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
3UTR GCA 72 bp CTCTGTAGACTGACAGGATACATTAAGTTAATGGCCTaGCTTGAGTCTGCATCCGAGTCTCCACTGAGAGCA +
Preference number: 3 (lower is better)
Translates to: LCRLTGYIKLMA*LESASESPLRA
Trigger: TGCTCTCAGTGGAGACTCGGATGCAGACTCAAGGCAGGCCATTAACTTAATGTATCCTGTCAGTCTACAGAG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
3UTR GCA 72 bp GTTAGGAGCCTGGCTGGAGGGGAGAAACTGCATTCCTaGCTCAGTACAACATTCTCTTCCTTAATGACACTA +
Preference number: 3 (lower is better)
Translates to: VRSLAGGEKLHS*LSTTFSSLMTL
Trigger: TAGTGTCATTAAGGAAGAGAATGTTGTACTGAGGCAGGAATGCAGTTTCTCCCCTCCAGCCAGGCTCCTAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
3UTR GCA 72 bp ACAAGAAGCTCTCATGGGTTCTGTTATCTTCATAACTaGCGACGCATGTGGAGGGCATTATGGGTAACCACC +
Preference number: 3 (lower is better)
Translates to: TRSSHGFCYLHN*RRMWRALWVTT
Trigger: GGTGGTTACCCATAATGCCCTCCACATGCGTCGGCAGTTATGAAGATAACAGAACCCATGAGAGCTTCTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
3UTR-3UTR CAA 90 bp ACAAGAAGCTCTCATGGGTTCTGTTATCTTCATAACTGCCGACGCATGTGGAGGAAAACCACCATCTTCTaGCCTCAGGCTTTCAAGCAC +
Preference number: 3 (lower is better)
Translates to: TRSSHGFCYLHNCRRMWRKTTIF*PQAFKH
Trigger: GTGCTTGAAAGCCTGAGGCAAGAAGATGGTGGTTTT...CCTCCACATGCGTCGGCAGTTATGAAGATAACAGAACCCATGAGAGCTTCTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
3UTR-3UTR CAA 90 bp ACAAGAAGCTCTCATGGGTTCTGTTATCTTCATAACTGCCGACGCATGTGGAGGAATCTCATTGGCCTGTaGCAGCACACACCATCTTCA +
Preference number: 3 (lower is better)
Translates to: TRSSHGFCYLHNCRRMWRNLIGL*QHTPSS
Trigger: TGAAGATGGTGTGTGCTGCAACAGGCCAATGAGATT...CCTCCACATGCGTCGGCAGTTATGAAGATAACAGAACCCATGAGAGCTTCTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
3UTR-3UTR CAA 90 bp AAAGTCATGAAGTTGGCATCTGACTCGTGCAGTTCAGCTACGGTCTTCATGTGTCCCGACAGCTATACTTaGACACTAGAGAACCGAGTA +
Preference number: 3 (lower is better)
Translates to: KVMKLASDSCSSATVFMCPDSYT*TLENRV
Trigger: TACTCGGTTCTCTAGTGTCAAAGTATAGCTGTCGGG...ACACATGAAGACCGTAGCTGAACTGCACGAGTCAGATGCCAACTTCATGACTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
3UTR-3UTR CAA 90 bp TTGGGAGTGAGAGAAGCTGCATTTAGATGCATGGGGTTACAGCTCTGTAGACTGTGTGCTATCATTGGGTaGAAAACTGGTTCAAGAGGC +
Preference number: 3 (lower is better)
Translates to: LGVREAAFRCMGLQLCRLCAIIG*KTGSRG
Trigger: GCCTCTTGAACCAGTTTTCAACCCAATGATAGCACA...CAGTCTACAGAGCTGTAACCCCATGCATCTAAATGCAGCTTCTCTCACTCCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
3UTR TCA 72 bp AAGCAGGTGGTGTTTTGGACAGGGTTAAATTGGGAGTaGGAGAAGCTGCATTTAGATGCATGGGGTTACAGC +
Preference number: 3 (lower is better)
Translates to: KQVVFWTGLNWE*EKLHLDAWGYS
Trigger: GCTGTAACCCCATGCATCTAAATGCAGCTTCTCTCACTCCCAATTTAACCCTGTCCAAAACACCACCTGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
3UTR TCA 72 bp GACAACGTCTACATGGAAAGTCATGAAGTTGGCATCTaGCTCGTGCAGTTCAGCTACGGTCTTCATGTGTAC +
Preference number: 3 (lower is better)
Translates to: DNVYMESHEVGI*LVQFSYGLHVY
Trigger: GTACACATGAAGACCGTAGCTGAACTGCACGAGTCAGATGCCAACTTCATGACTTTCCATGTAGACGTTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
3UTR GCA 72 bp AAAGCACAGCACGAAGTAAAAATCTCATTGGCCTGTTaGAGCACACACCATCTTCATGGGACACACAGGATC +
Preference number: 3 (lower is better)
Translates to: KAQHEVKISLAC*STHHLHGTHRI
Trigger: GATCCTGTGTGTCCCATGAAGATGGTGTGTGCTGCAACAGGCCAATGAGATTTTTACTTCGTGCTGTGCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
3UTR GCA 72 bp TGGGACAGCAGTGAGAATCAGGAAAGAGACAGTCTCTaGTTTATAAAGGAAAAATCTTCCGCCACCCAGCTG +
Preference number: 3 (lower is better)
Translates to: WDSSENQERDSL*FIKEKSSATQL
Trigger: CAGCTGGGTGGCGGAAGATTTTTCCTTTATAAAGCAGAGACTGTCTCTTTCCTGATTCTCACTGCTGTCCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
3UTR-3UTR CAA 90 bp TTGGGAGTGAGAGAAGCTGCATTTAGATGCATGGGGTTACAGCTCTGTAGACTGTCTGCCCTCTTTTCCTaGCCTTTGAGTTTAAAGAAG +
Preference number: 3 (lower is better)
Translates to: LGVREAAFRCMGLQLCRLSALFS*PLSLKK
Trigger: CTTCTTTAAACTCAAAGGCAAGGAAAAGAGGGCAGA...CAGTCTACAGAGCTGTAACCCCATGCATCTAAATGCAGCTTCTCTCACTCCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
3UTR GCA 72 bp AGGGTTAAATTGGGAGTGAGAGAAGCTGCATTTAGATaGATGGGGTTACAGCTCTGTAGACTGACAGGATAC +
Preference number: 3 (lower is better)
Translates to: RVKLGVREAAFR*MGLQLCRLTGY
Trigger: GTATCCTGTCAGTCTACAGAGCTGTAACCCCATGCATCTAAATGCAGCTTCTCTCACTCCCAATTTAACCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
3UTR CCA 72 bp CCCTCCGCCACTCAGTTTACCTGCACAAGAGATGGATaGAGCTATGAAGTGAAACTGTTTCTAACACTTACT +
Preference number: 3 (lower is better)
Translates to: PSATQFTCTRDG*SYEVKLFLTLT
Trigger: AGTAAGTGTTAGAAACAGTTTCACTTCATAGCTCCATCCATCTCTTGTGCAGGTAAACTGAGTGGCGGAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
3UTR CCA 72 bp TACAGCAGGGTCTGCTTCGCTAGAACAAGGGTGAAGTaGCTGTTGACAAAGCTTGCTATTTTCAGAGTTGAA +
Preference number: 3 (lower is better)
Translates to: YSRVCFARTRVK*LLTKLAIFRVE
Trigger: TTCAACTCTGAAAATAGCAAGCTTTGTCAACAGCCACTTCACCCTTGTTCTAGCGAAGCAGACCCTGCTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
3UTR-3UTR CAA 90 bp ACAAGAAGCTCTCATGGGTTCTGTTATCTTCATAACTGCCGACGCATGTGGAGGCATTGCACTGTTTTGTaGTTGCTCGATCACACTAAT +
Preference number: 3 (lower is better)
Translates to: TRSSHGFCYLHNCRRMWRHCTVL*LLDHTN
Trigger: ATTAGTGTGATCGAGCAACAACAAAACAGTGCAATG...CCTCCACATGCGTCGGCAGTTATGAAGATAACAGAACCCATGAGAGCTTCTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
3UTR-3UTR CAA 90 bp GAGAAACTGCATTCCTGCCTCAGTACAACATTCTCTTCCTTAATGACACTATCTGGACAGCAAGATATTTaGGCAGCCGGCAAGATGGTA +
Preference number: 3 (lower is better)
Translates to: EKLHSCLSTTFSSLMTLSGQQDI*AAGKMV
Trigger: TACCATCTTGCCGGCTGCCAAAATATCTTGCTGTCC...AGATAGTGTCATTAAGGAAGAGAATGTTGTACTGAGGCAGGAATGCAGTTTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
3UTR TCA 72 bp TGGGATTTTAGAGCGGGAGAGGACACCATTCTTTGCTaGATGTTGCTATCTGAAAAACAACTGCTTGAGCGA +
Preference number: 3 (lower is better)
Translates to: WDFRAGEDTILC*MLLSEKQLLER
Trigger: TCGCTCAAGCAGTTGTTTTTCAGATAGCAACATTCAGCAAAGAATGGTGTCCTCTCCCGCTCTAAAATCCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
3UTR TCA 72 bp TTCTTTATGGCTCTGTTTAGAAGGACACTTCTGCAGTaGCATGATGGGGAGCTGAGCCAATTTCTAAACAGC +
Preference number: 3 (lower is better)
Translates to: FFMALFRRTLLQ*HDGELSQFLNS
Trigger: GCTGTTTAGAAATTGGCTCAGCTCCCCATCATGTCACTGCAGAAGTGTCCTTCTAAACAGAGCCATAAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
3UTR TCA 72 bp GATGGTATAAACAGCAGGGGGTGGACAGGACACATTTaGTGCTGTAATATATTTGGTAACAGAGATGGACGG +
Preference number: 3 (lower is better)
Translates to: DGINSRGWTGHI*CCNIFGNRDGR
Trigger: CCGTCCATCTCTGTTACCAAATATATTACAGCATCAAATGTGTCCTGTCCACCCCCTGCTGTTTATACCATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
3UTR CCA 72 bp CCTCAGTACAACATTCTCTTCCTTAATGACACTATCTaGACATACACGAAGAACAGCCAGGGGGAATTGAGA +
Preference number: 3 (lower is better)
Translates to: PQYNILFLNDTI*TYTKNSQGELR
Trigger: TCTCAATTCCCCCTGGCTGTTCTTCGTGTATGTCCAGATAGTGTCATTAAGGAAGAGAATGTTGTACTGAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
3UTR CCA 72 bp ATTAAACCACTAGAGTATTACACGAGCTGGCCCATTTaGGTTAGCCTTAGTCAAACTGCCAAACCAGCAACA +
Preference number: 3 (lower is better)
Translates to: IKPLEYYTSWPI*VSLSQTAKPAT
Trigger: TGTTGCTGGTTTGGCAGTTTGACTAAGGCTAACCCAAATGGGCCAGCTCGTGTAATACTCTAGTGGTTTAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
3UTR GCA 72 bp TCTACATGGAAAGTCATGAAGTTGGCATCTGACTCGTaGAGTTCAGCTACGGTCTTCATGTGTACATTCATT +
Preference number: 3 (lower is better)
Translates to: STWKVMKLASDS*SSATVFMCTFI
Trigger: AATGAATGTACACATGAAGACCGTAGCTGAACTGCACGAGTCAGATGCCAACTTCATGACTTTCCATGTAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
3UTR CCA 72 bp GAATCTCCTGTCCCACTGAAGAGTTATAGGTTAATCTaGACGGTTGGGGAATTTTTACTCTACATTCAAGCC +
Preference number: 3 (lower is better)
Translates to: ESPVPLKSYRLI*TVGEFLLYIQA
Trigger: GGCTTGAATGTAGAGTAAAAATTCCCCAACCGTCCAGATTAACCTATAACTCTTCAGTGGGACAGGAGATTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
3UTR CCA 72 bp GCTTACCCTAACTTTAAACCATACACAATAAGAGACTaGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGCAGT +
Preference number: 3 (lower is better)
Translates to: AYPNFKPYTIRD*CVCVCVCVCSS
Trigger: ACTGCTACACACACACACACACACACACACACACCAGTCTCTTATTGTGTATGGTTTAAAGTTAGGGTAAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
3UTR-3UTR CAA 90 bp GAGAAACTGCATTCCTGCCTCAGTACAACATTCTCTTCCTTAATGACACTATCTTCACATTTCACGTTATaGCCAATAGGCAGTGTAAGG +
Preference number: 3 (lower is better)
Translates to: EKLHSCLSTTFSSLMTLSSHFTL*PIGSVR
Trigger: CCTTACACTGCCTATTGGCAATAACGTGAAATGTGA...AGATAGTGTCATTAAGGAAGAGAATGTTGTACTGAGGCAGGAATGCAGTTTCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
3UTR-3UTR CAA 90 bp TTTAAGGCCCAAACACCACCAATCAAACTGTTGTCTAAAACACTACCTCATTTGCAGCATTGCACTGTTTaGTTGTTGCTCGATCACACT +
Preference number: 3 (lower is better)
Translates to: FKAQTPPIKLLSKTLPHLQHCTV*LLLDHT
Trigger: AGTGTGATCGAGCAACAACAAAACAGTGCAATGCTG...CAAATGAGGTAGTGTTTTAGACAACAGTTTGATTGGTGGTGTTTGGGCCTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
3UTR-3UTR CAA 90 bp TTTAAGGCCCAAACACCACCAATCAAACTGTTGTCTAAAACACTACCTCATTTGCAAAGAAACATTTGGTaGGAGTTGTGGGTACCAAGT +
Preference number: 3 (lower is better)
Translates to: FKAQTPPIKLLSKTLPHLQRNIW*ELWVPS
Trigger: ACTTGGTACCCACAACTCCAACCAAATGTTTCTTTG...CAAATGAGGTAGTGTTTTAGACAACAGTTTGATTGGTGGTGTTTGGGCCTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
3UTR TCA 72 bp ATTAGCATAGATGCTGGCAAATGTGAAATTTCAAACTaGGCCATCCAAACCATGAACCATCATGGGTTTCAG +
Preference number: 3 (lower is better)
Translates to: ISIDAGKCEISN*AIQTMNHHGFQ
Trigger: CTGAAACCCATGATGGTTCATGGTTTGGATGGCTCAGTTTGAAATTTCACATTTGCCAGCATCTATGCTAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
3UTR TCA 72 bp GTACCATTAAACTCAGGCTGTATTTTGGGACAGCAGTaGGAATCAGGAAAGAGACAGTCTCTGCTTTATAAA +
Preference number: 3 (lower is better)
Translates to: VPLNSGCILGQQ*ESGKRQSLLYK
Trigger: TTTATAAAGCAGAGACTGTCTCTTTCCTGATTCTCACTGCTGTCCCAAAATACAGCCTGAGTTTAATGGTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
3UTR CCA 72 bp CATGTCTATTCAATTAGTATAAAGAAGATGCCCAAGTaGCCTGGGATCTGCTTCCAATGTCCATCTTGTTTT +
Preference number: 3 (lower is better)
Translates to: HVYSISIKKMPK*PGICFQCPSCF
Trigger: AAAACAAGATGGACATTGGAAGCAGATCCCAGGCCACTTGGGCATCTTCTTTATACTAATTGAATAGACATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
3UTR-3UTR CAA 90 bp TTCACAAATCAACTTTTTGAGGCTGGTTCACTTAGGTTCATAAGTACATTGCTGTCGCCAGGGTTACTTTaGCAATTGTTAGCAATGTTA +
Preference number: 3 (lower is better)
Translates to: FTNQLFEAGSLRFISTLLSPGLL*QLLAML
Trigger: TAACATTGCTAACAATTGCAAAAGTAACCCTGGCGA...CAGCAATGTACTTATGAACCTAAGTGAACCAGCCTCAAAAAGTTGATTTGTGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
3UTR-3UTR CAA 90 bp TTTAAGGCCCAAACACCACCAATCAAACTGTTGTCTAAAACACTACCTCATTTGAGGTTCATAAGTACATaGCTGTGTTTTCATGCACTT +
Preference number: 3 (lower is better)
Translates to: FKAQTPPIKLLSKTLPHLRFIST*LCFHAL
Trigger: AAGTGCATGAAAACACAGCAATGTACTTATGAACCT...CAAATGAGGTAGTGTTTTAGACAACAGTTTGATTGGTGGTGTTTGGGCCTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
3UTR TCA 72 bp AACCTTCTAAGGTGGGGGAGAAAGAGTTTCCCTGGATaGTATCCATTAGATCTTAGAATTATTAAAATCTTT +
Preference number: 3 (lower is better)
Translates to: NLLRWGRKSFPG*YPLDLRIIKIF
Trigger: AAAGATTTTAATAATTCTAAGATCTAATGGATATCATCCAGGGAAACTCTTTCTCCCCCACCTTAGAAGGTT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
CDS-3UTR TCA 90 bp ACGAGTTCTGATGGGAGTCCCGGGCGAGAGGCCCTGATGCATGCTGACGCCTTCGTCTGGCTGCAGCCATaGTGGCAATGTAGTGCCTGT +
Preference number: 4 (lower is better)
Translates to: TSSDGSPGREALMHADAFVWLQP*WQCSAC
Trigger: ACAGGCACTACATTGCCATCATGGCTGCAGCCAGAC...GAAGGCGTCAGCATGCATCAGGGCCTCTCGCCCGGGACTCCCATCAGAACTCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034507.9
ENSMUST00000208222.2
CDS-3UTR TCA 90 bp AGTTCTGATGGGAGTCCCGGGCGAGAGGCCCTGATGCATGCTGACGCCTTCCTCGAATGTGCTCTTTTGTaGTCAGCCAGGGCCGGTGTG +
Preference number: 4 (lower is better)
Translates to: SSDGSPGREALMHADAFLECALL*SARAGV
Trigger: CACACCGGCCCTGGCTGATCACAAAAGAGCACATTC...GAGGAAGGCGTCAGCATGCATCAGGGCCTCTCGCCCGGGACTCCCATCAGAACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034507.9
ENSMUST00000208222.2
CDS-3UTR CCA 90 bp ACGAGTTCTGATGGGAGTCCCGGGCGAGAGGCCCTGATGCATGCTGACGCCTTCGCACTTTCCGGCAGTTaGTGCAGAGCAGGTAGTTGG +
Preference number: 4 (lower is better)
Translates to: TSSDGSPGREALMHADAFALSGS*CRAGSW
Trigger: CCAACTACCTGCTCTGCACCAACTGCCGGAAAGTGC...GAAGGCGTCAGCATGCATCAGGGCCTCTCGCCCGGGACTCCCATCAGAACTCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
3UTR CAA 72 bp CCGCTCCAGGCCACCGCACAGCAGCTTGCTCTGCTCTaGGTCTTACCTAAGCAGGTGGTGTTTTGGACAGGG +
Preference number: 4 (lower is better)
Translates to: PLQATAQQLALL*VLPKQVVFWTG
Trigger: CCCTGTCCAAAACACCACCTGCTTAGGTAAGACCAAGAGCAGAGCAAGCTGCTGTGCGGTGGCCTGGAGCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
3UTR CAA 72 bp GATGCACAGCTCCGCTCCAGGCCACCGCACAGCAGCTaGCTCTGCTCTTGGTCTTACCTAAGCAGGTGGTGT +
Preference number: 4 (lower is better)
Translates to: DAQLRSRPPHSS*LCSWSYLSRWC
Trigger: ACACCACCTGCTTAGGTAAGACCAAGAGCAGAGCAAGCTGCTGTGCGGTGGCCTGGAGCGGAGCTGTGCATC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
CDS-3UTR TCA 90 bp AGCCACCCAGAACTGGCCCCAGCTGCATGGGCACGCAGCTTACTGTGCCCTCTCAGCAGGTCACTGTCTTaGTGTAAACCTTCAGGCTCC +
Preference number: 4 (lower is better)
Translates to: SHPELAPAAWARSLLCPLSRSLS*CKPSGS
Trigger: GGAGCCTGAAGGTTTACATCAAGACAGTGACCTGCT...GAGAGGGCACAGTAAGCTGCGTGCCCATGCAGCTGGGGCCAGTTCTGGGTGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
CDS-3UTR TCA 90 bp TCTGATGGGAGTCCCGGGCGAGAGGCCCTGATGCATGCTGACGCCTTCCTCCAGCCTCTTGTCAGGGGTTaGGACACTCGGATTCTTTTG +
Preference number: 4 (lower is better)
Translates to: SDGSPGREALMHADAFLQPLVRG*DTRILL
Trigger: CAAAAGAATCCGAGTGTCTCAACCCCTGACAAGAGG...CTGGAGGAAGGCGTCAGCATGCATCAGGGCCTCTCGCCCGGGACTCCCATCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
CDS-3UTR GCA 90 bp TGCCCCAAAGCATTCAGACCACTCCCACAGACAAGGGGGCACGCCCACTTTCACCTTTCCGGCAGTTGGTaGAGAGCAGGTAGTTGGCCG +
Preference number: 4 (lower is better)
Translates to: CPKAFRPLPQTRGHAHFHLSGSW*RAGSWP
Trigger: CGGCCAACTACCTGCTCTGCACCAACTGCCGGAAAG...GTGAAAGTGGGCGTGCCCCCTTGTCTGTGGGAGTGGTCTGAATGCTTTGGGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
CDS-3UTR CCA 90 bp TCTGATGGGAGTCCCGGGCGAGAGGCCCTGATGCATGCTGACGCCTTCCTCCAGCTGGGCTCGGAATGTTaGCAAATGTTCTTCTCCTCG +
Preference number: 4 (lower is better)
Translates to: SDGSPGREALMHADAFLQLGSEC*QMFFSS
Trigger: CGAGGAGAAGAACATTTGCCAACATTCCGAGCCCAG...CTGGAGGAAGGCGTCAGCATGCATCAGGGCCTCTCGCCCGGGACTCCCATCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034507.9
ENSMUST00000208222.2
ENSMUST00000209187.2
CDS-3UTR CCA 90 bp CAAACGAGTTCTGATGGGAGTCCCGGGCGAGAGGCCCTGATGCATGCTGACGCCCATACATGCGCTTCGTaGTTCTCTCAGGGTAGCAGG +
Preference number: 4 (lower is better)
Translates to: QTSSDGSPGREALMHADAHTCAS*FSQGSR
Trigger: CCTGCTACCCTGAGAGAACCACGAAGCGCATGTATG...GGCGTCAGCATGCATCAGGGCCTCTCGCCCGGGACTCCCATCAGAACTCGTTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034507.9
ENSMUST00000208222.2
ENSMUST00000209187.2
CDS-3UTR CCA 90 bp ACGAGTTCTGATGGGAGTCCCGGGCGAGAGGCCCTGATGCATGCTGACGCCTTCCATACATGCGCTTCGTaGTTCTCTCAGGGTAGCAGG +
Preference number: 4 (lower is better)
Translates to: TSSDGSPGREALMHADAFHTCAS*FSQGSR
Trigger: CCTGCTACCCTGAGAGAACCACGAAGCGCATGTATG...GAAGGCGTCAGCATGCATCAGGGCCTCTCGCCCGGGACTCCCATCAGAACTCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034507.9
ENSMUST00000208222.2
ENSMUST00000209187.2
CDS-3UTR TCA 90 bp TCTGATGGGAGTCCCGGGCGAGAGGCCCTGATGCATGCTGACGCCTTCCTCCAGTCACAGAGATTAGTCTaGACCCATTGGCGATTCCTG +
Preference number: 4 (lower is better)
Translates to: SDGSPGREALMHADAFLQSQRLV*THWRFL
Trigger: CAGGAATCGCCAATGGGTTCAGACTAATCTCTGTGA...CTGGAGGAAGGCGTCAGCATGCATCAGGGCCTCTCGCCCGGGACTCCCATCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034507.9
ENSMUST00000208222.2
ENSMUST00000209187.2
CDS-3UTR TCA 90 bp AGTTCTGATGGGAGTCCCGGGCGAGAGGCCCTGATGCATGCTGACGCCTTCCTCAAGCCTGTTCACCAGTaGGAACCCATGGTTTTCCCA +
Preference number: 4 (lower is better)
Translates to: SSDGSPGREALMHADAFLKPVHQ*EPMVFP
Trigger: TGGGAAAACCATGGGTTCTCACTGGTGAACAGGCTT...GAGGAAGGCGTCAGCATGCATCAGGGCCTCTCGCCCGGGACTCCCATCAGAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034507.9
ENSMUST00000208222.2
ENSMUST00000209187.2
CDS-3UTR TCA 90 bp ACGAGTTCTGATGGGAGTCCCGGGCGAGAGGCCCTGATGCATGCTGACGCCTTCAGCAGGTCACTGTCTTaGTGTAAACCTTCAGGCTCC +
Preference number: 4 (lower is better)
Translates to: TSSDGSPGREALMHADAFSRSLS*CKPSGS
Trigger: GGAGCCTGAAGGTTTACATCAAGACAGTGACCTGCT...GAAGGCGTCAGCATGCATCAGGGCCTCTCGCCCGGGACTCCCATCAGAACTCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034507.9
ENSMUST00000208222.2
ENSMUST00000209187.2
CDS-3UTR CCA 90 bp AGTTCTGATGGGAGTCCCGGGCGAGAGGCCCTGATGCATGCTGACGCCTTCCTCCCCATTGGCGATTCCTaGGTCTCTCTCTGGATTGAT +
Preference number: 4 (lower is better)
Translates to: SSDGSPGREALMHADAFLPIGDS*VSLWID
Trigger: ATCAATCCAGAGAGAGACCCAGGAATCGCCAATGGG...GAGGAAGGCGTCAGCATGCATCAGGGCCTCTCGCCCGGGACTCCCATCAGAACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034507.9
ENSMUST00000208222.2
ENSMUST00000209187.2
CDS-3UTR CCA 90 bp ACGAGTTCTGATGGGAGTCCCGGGCGAGAGGCCCTGATGCATGCTGACGCCTTCCCCATTGGCGATTCCTaGGTCTCTCTCTGGATTGAT +
Preference number: 4 (lower is better)
Translates to: TSSDGSPGREALMHADAFPIGDS*VSLWID
Trigger: ATCAATCCAGAGAGAGACCCAGGAATCGCCAATGGG...GAAGGCGTCAGCATGCATCAGGGCCTCTCGCCCGGGACTCCCATCAGAACTCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034507.9
ENSMUST00000208222.2
ENSMUST00000209187.2
CDS-3UTR CCA 90 bp CAAACGAGTTCTGATGGGAGTCCCGGGCGAGAGGCCCTGATGCATGCTGACGCCGTTCTTCTCCTCGCCTaGCAAAGTCTTCGTACCCAA +
Preference number: 4 (lower is better)
Translates to: QTSSDGSPGREALMHADAVLLLA*QSLRTQ
Trigger: TTGGGTACGAAGACTTTGCCAGGCGAGGAGAAGAAC...GGCGTCAGCATGCATCAGGGCCTCTCGCCCGGGACTCCCATCAGAACTCGTTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034507.9
ENSMUST00000208222.2
ENSMUST00000209187.2
CDS-3UTR CCA 90 bp AGTTCTGATGGGAGTCCCGGGCGAGAGGCCCTGATGCATGCTGACGCCTTCCTCCTGGGCTCGGAATGTTaGCAAATGTTCTTCTCCTCG +
Preference number: 4 (lower is better)
Translates to: SSDGSPGREALMHADAFLLGSEC*QMFFSS
Trigger: CGAGGAGAAGAACATTTGCCAACATTCCGAGCCCAG...GAGGAAGGCGTCAGCATGCATCAGGGCCTCTCGCCCGGGACTCCCATCAGAACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034507.9
ENSMUST00000208222.2
ENSMUST00000209187.2
CDS-3UTR CCA 90 bp AGTTCTGATGGGAGTCCCGGGCGAGAGGCCCTGATGCATGCTGACGCCTTCCTCAAGCTCTGCGCAGTGTaGTCGTGTCAACATCCTCAT +
Preference number: 4 (lower is better)
Translates to: SSDGSPGREALMHADAFLKLCAV*SCQHPH
Trigger: ATGAGGATGTTGACACGACCACACTGCGCAGAGCTT...GAGGAAGGCGTCAGCATGCATCAGGGCCTCTCGCCCGGGACTCCCATCAGAACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034507.9
ENSMUST00000208222.2
ENSMUST00000209187.2
CDS-3UTR CCA 90 bp AGCCACCCAGAACTGGCCCCAGCTGCATGGGCACGCAGCTTACTGTGCCCTCTCTCAGATGCCGAGTTATaGCTCGCAGAGCATAAAGCA +
Preference number: 4 (lower is better)
Translates to: SHPELAPAAWARSLLCPLSDAEL*LAEHKA
Trigger: TGCTTTATGCTCTGCGAGCCATAACTCGGCATCTGA...GAGAGGGCACAGTAAGCTGCGTGCCCATGCAGCTGGGGCCAGTTCTGGGTGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
CDS-3UTR TCA 90 bp CAAACGAGTTCTGATGGGAGTCCCGGGCGAGAGGCCCTGATGCATGCTGACGCCTCTTCCCTGTCTTCCTaGAGCCTTTTCATCCTTTCC +
Preference number: 4 (lower is better)
Translates to: QTSSDGSPGREALMHADASSLSS*SLFILS
Trigger: GGAAAGGATGAAAAGGCTTCAGGAAGACAGGGAAGA...GGCGTCAGCATGCATCAGGGCCTCTCGCCCGGGACTCCCATCAGAACTCGTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034507.9
ENSMUST00000208222.2
ENSMUST00000209187.2
CDS-3UTR GCA 90 bp CAAACGAGTTCTGATGGGAGTCCCGGGCGAGAGGCCCTGATGCATGCTGACGCCAGTAGCTGTCATACATaGGCTTCGTGGTTCTCTCAG +
Preference number: 4 (lower is better)
Translates to: QTSSDGSPGREALMHADASSCHT*ASWFSQ
Trigger: CTGAGAGAACCACGAAGCGCATGTATGACAGCTACT...GGCGTCAGCATGCATCAGGGCCTCTCGCCCGGGACTCCCATCAGAACTCGTTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034507.9
ENSMUST00000208222.2
ENSMUST00000209187.2
CDS-3UTR CCA 90 bp AGTTCTGATGGGAGTCCCGGGCGAGAGGCCCTGATGCATGCTGACGCCTTCCTCTCCTGGGTCTCTCTCTaGATTGATGCCACTACCAAA +
Preference number: 4 (lower is better)
Translates to: SSDGSPGREALMHADAFLSWVSL*IDATTK
Trigger: TTTGGTAGTGGCATCAATCCAGAGAGAGACCCAGGA...GAGGAAGGCGTCAGCATGCATCAGGGCCTCTCGCCCGGGACTCCCATCAGAACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034507.9
ENSMUST00000208222.2
ENSMUST00000209187.2
CDS-3UTR TCA 90 bp CAAACGAGTTCTGATGGGAGTCCCGGGCGAGAGGCCCTGATGCATGCTGACGCCGGTCTCTCTCTGGATTaGTGCCACTACCAAAAACAA +
Preference number: 4 (lower is better)
Translates to: QTSSDGSPGREALMHADAGLSLD*CHYQKQ
Trigger: TTGTTTTTGGTAGTGGCATCAATCCAGAGAGAGACC...GGCGTCAGCATGCATCAGGGCCTCTCGCCCGGGACTCCCATCAGAACTCGTTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000034507.9
ENSMUST00000208222.2
ENSMUST00000209187.2
CDS-3UTR TCA 90 bp TCACAAACGAGTTCTGATGGGAGTCCCGGGCGAGAGGCCCTGATGCATGCTGACAAGCCTGTTCACCAGTaGGAACCCATGGTTTTCCCA +
Preference number: 4 (lower is better)
Translates to: SQTSSDGSPGREALMHADKPVHQ*EPMVFP
Trigger: TGGGAAAACCATGGGTTCTCACTGGTGAACAGGCTT...GTCAGCATGCATCAGGGCCTCTCGCCCGGGACTCCCATCAGAACTCGTTTGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034507.9
ENSMUST00000208222.2
ENSMUST00000209187.2
CDS-3UTR TCA 90 bp TCACAAACGAGTTCTGATGGGAGTCCCGGGCGAGAGGCCCTGATGCATGCTGACAGCAGGTCACTGTCTTaGTGTAAACCTTCAGGCTCC +
Preference number: 4 (lower is better)
Translates to: SQTSSDGSPGREALMHADSRSLS*CKPSGS
Trigger: GGAGCCTGAAGGTTTACATCAAGACAGTGACCTGCT...GTCAGCATGCATCAGGGCCTCTCGCCCGGGACTCCCATCAGAACTCGTTTGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034507.9
ENSMUST00000208222.2
ENSMUST00000209187.2
CDS-3UTR CCA 90 bp TCTGATGGGAGTCCCGGGCGAGAGGCCCTGATGCATGCTGACGCCTTCCTCCAGTACCAAAAACAAAGCTaGCCAAAGCGTGATAGTGAG +
Preference number: 4 (lower is better)
Translates to: SDGSPGREALMHADAFLQYQKQS*PKRDSE
Trigger: CTCACTATCACGCTTTGGCCAGCTTTGTTTTTGGTA...CTGGAGGAAGGCGTCAGCATGCATCAGGGCCTCTCGCCCGGGACTCCCATCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000034507.9
ENSMUST00000208222.2
ENSMUST00000209187.2
CDS-3UTR CCA 90 bp TCACAAACGAGTTCTGATGGGAGTCCCGGGCGAGAGGCCCTGATGCATGCTGACCCCATTGGCGATTCCTaGGTCTCTCTCTGGATTGAT +
Preference number: 4 (lower is better)
Translates to: SQTSSDGSPGREALMHADPIGDS*VSLWID
Trigger: ATCAATCCAGAGAGAGACCCAGGAATCGCCAATGGG...GTCAGCATGCATCAGGGCCTCTCGCCCGGGACTCCCATCAGAACTCGTTTGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034507.9
ENSMUST00000208222.2
ENSMUST00000209187.2
CDS-3UTR CCA 90 bp TCACAAACGAGTTCTGATGGGAGTCCCGGGCGAGAGGCCCTGATGCATGCTGACGTTCTTCTCCTCGCCTaGCAAAGTCTTCGTACCCAA +
Preference number: 4 (lower is better)
Translates to: SQTSSDGSPGREALMHADVLLLA*QSLRTQ
Trigger: TTGGGTACGAAGACTTTGCCAGGCGAGGAGAAGAAC...GTCAGCATGCATCAGGGCCTCTCGCCCGGGACTCCCATCAGAACTCGTTTGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034507.9
ENSMUST00000208222.2
ENSMUST00000209187.2
CDS-3UTR CCA 90 bp TCACAAACGAGTTCTGATGGGAGTCCCGGGCGAGAGGCCCTGATGCATGCTGACAAGCTCTGCGCAGTGTaGTCGTGTCAACATCCTCAT +
Preference number: 4 (lower is better)
Translates to: SQTSSDGSPGREALMHADKLCAV*SCQHPH
Trigger: ATGAGGATGTTGACACGACCACACTGCGCAGAGCTT...GTCAGCATGCATCAGGGCCTCTCGCCCGGGACTCCCATCAGAACTCGTTTGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034507.9
ENSMUST00000208222.2
ENSMUST00000209187.2
CDS-3UTR CCA 90 bp GCGTCACAAACGAGTTCTGATGGGAGTCCCGGGCGAGAGGCCCTGATGCATGCTTCAGATGCCGAGTTATaGCTCGCAGAGCATAAAGCA +
Preference number: 4 (lower is better)
Translates to: ASQTSSDGSPGREALMHASDAEL*LAEHKA
Trigger: TGCTTTATGCTCTGCGAGCCATAACTCGGCATCTGA...AGCATGCATCAGGGCCTCTCGCCCGGGACTCCCATCAGAACTCGTTTGTGACGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000208222.2
ENSMUST00000209187.2
CDS-3UTR CCA 90 bp GCGTCACAAACGAGTTCTGATGGGAGTCCCGGGCGAGAGGCCCTGATGCATGCTTGGAATAAAGGCACTTaGTCCTCTTGTCAGGGGTTG +
Preference number: 4 (lower is better)
Translates to: ASQTSSDGSPGREALMHAWNKGT*SSCQGL
Trigger: CAACCCCTGACAAGAGGACCAAGTGCCTTTATTCCA...AGCATGCATCAGGGCCTCTCGCCCGGGACTCCCATCAGAACTCGTTTGTGACGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
CDS-3UTR CCA 90 bp CAAACGAGTTCTGATGGGAGTCCCGGGCGAGAGGCCCTGATGCATGCTGACGCCGACAACTTCCTTCTCTaGAATAAAGGCACTTGGTCC +
Preference number: 4 (lower is better)
Translates to: QTSSDGSPGREALMHADADNFLL*NKGTWS
Trigger: GGACCAAGTGCCTTTATTCCAGAGAAGGAAGTTGTC...GGCGTCAGCATGCATCAGGGCCTCTCGCCCGGGACTCCCATCAGAACTCGTTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
3UTR CAA 72 bp CAGACGTGCTTTTCACACACATTTGCACGCTTATGTTaGGCACAGTGTGAGCCCCGCCCGAGTGCAGCTCAG +
Preference number: 4 (lower is better)
Translates to: QTCFSHTFARLC*AQCEPRPSAAQ
Trigger: CTGAGCTGCACTCGGGCGGGGCTCACACTGTGCCAAACATAAGCGTGCAAATGTGTGTGAAAAGCACGTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
CDS-3UTR TCA 90 bp GGTGCGTCACAAACGAGTTCTGATGGGAGTCCCGGGCGAGAGGCCCTGATGCATGGTCTCTCTCTGGATTaGTGCCACTACCAAAAACAA +
Preference number: 4 (lower is better)
Translates to: GASQTSSDGSPGREALMHGLSLD*CHYQKQ
Trigger: TTGTTTTTGGTAGTGGCATCAATCCAGAGAGAGACC...ATGCATCAGGGCCTCTCGCCCGGGACTCCCATCAGAACTCGTTTGTGACGCACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000208222.2
ENSMUST00000209187.2
CDS-3UTR TCA 90 bp TCACAAACGAGTTCTGATGGGAGTCCCGGGCGAGAGGCCCTGATGCATGCTGACTCACAGAGATTAGTCTaGACCCATTGGCGATTCCTG +
Preference number: 4 (lower is better)
Translates to: SQTSSDGSPGREALMHADSQRLV*THWRFL
Trigger: CAGGAATCGCCAATGGGTTCAGACTAATCTCTGTGA...GTCAGCATGCATCAGGGCCTCTCGCCCGGGACTCCCATCAGAACTCGTTTGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034507.9
ENSMUST00000208222.2
ENSMUST00000209187.2
CDS-3UTR TCA 90 bp TCACAAACGAGTTCTGATGGGAGTCCCGGGCGAGAGGCCCTGATGCATGCTGACTCTTCCCTGTCTTCCTaGAGCCTTTTCATCCTTTCC +
Preference number: 4 (lower is better)
Translates to: SQTSSDGSPGREALMHADSSLSS*SLFILS
Trigger: GGAAAGGATGAAAAGGCTTCAGGAAGACAGGGAAGA...GTCAGCATGCATCAGGGCCTCTCGCCCGGGACTCCCATCAGAACTCGTTTGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034507.9
ENSMUST00000208222.2
ENSMUST00000209187.2
CDS-3UTR TCA 90 bp ACGAGTTCTGATGGGAGTCCCGGGCGAGAGGCCCTGATGCATGCTGACGCCTTCCCATTGTGTTGTAGGTaGGATTGTAGACCATTCGAA +
Preference number: 4 (lower is better)
Translates to: TSSDGSPGREALMHADAFPLCCR*DCRPFE
Trigger: TTCGAATGGTCTACAATCTCACCTACAACACAATGG...GAAGGCGTCAGCATGCATCAGGGCCTCTCGCCCGGGACTCCCATCAGAACTCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034507.9
ENSMUST00000208222.2
ENSMUST00000209187.2
CDS-3UTR GCA 90 bp TCACAAACGAGTTCTGATGGGAGTCCCGGGCGAGAGGCCCTGATGCATGCTGACAGTAGCTGTCATACATaGGCTTCGTGGTTCTCTCAG +
Preference number: 4 (lower is better)
Translates to: SQTSSDGSPGREALMHADSSCHT*ASWFSQ
Trigger: CTGAGAGAACCACGAAGCGCATGTATGACAGCTACT...GTCAGCATGCATCAGGGCCTCTCGCCCGGGACTCCCATCAGAACTCGTTTGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034507.9
ENSMUST00000208222.2
ENSMUST00000209187.2
CDS-3UTR CCA 90 bp ACGAGTTCTGATGGGAGTCCCGGGCGAGAGGCCCTGATGCATGCTGACGCCTTCTACCAAAAACAAAGCTaGCCAAAGCGTGATAGTGAG +
Preference number: 4 (lower is better)
Translates to: TSSDGSPGREALMHADAFYQKQS*PKRDSE
Trigger: CTCACTATCACGCTTTGGCCAGCTTTGTTTTTGGTA...GAAGGCGTCAGCATGCATCAGGGCCTCTCGCCCGGGACTCCCATCAGAACTCGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000034507.9
ENSMUST00000208222.2
ENSMUST00000209187.2
CDS-3UTR CCA 90 bp TCACAAACGAGTTCTGATGGGAGTCCCGGGCGAGAGGCCCTGATGCATGCTGACTCCTGGGTCTCTCTCTaGATTGATGCCACTACCAAA +
Preference number: 4 (lower is better)
Translates to: SQTSSDGSPGREALMHADSWVSL*IDATTK
Trigger: TTTGGTAGTGGCATCAATCCAGAGAGAGACCCAGGA...GTCAGCATGCATCAGGGCCTCTCGCCCGGGACTCCCATCAGAACTCGTTTGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034507.9
ENSMUST00000208222.2
ENSMUST00000209187.2
CDS-3UTR CCA 90 bp TCACAAACGAGTTCTGATGGGAGTCCCGGGCGAGAGGCCCTGATGCATGCTGACTCATTTCTTCCCGAGTaGTCTCGTCATCTTCCCTGT +
Preference number: 4 (lower is better)
Translates to: SQTSSDGSPGREALMHADSFLPE*SRHLPC
Trigger: ACAGGGAAGATGACGAGACCACTCGGGAAGAAATGA...GTCAGCATGCATCAGGGCCTCTCGCCCGGGACTCCCATCAGAACTCGTTTGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034507.9
ENSMUST00000208222.2
ENSMUST00000209187.2
CDS-3UTR CCA 90 bp TCACAAACGAGTTCTGATGGGAGTCCCGGGCGAGAGGCCCTGATGCATGCTGACTCAGATGCCGAGTTATaGCTCGCAGAGCATAAAGCA +
Preference number: 4 (lower is better)
Translates to: SQTSSDGSPGREALMHADSDAEL*LAEHKA
Trigger: TGCTTTATGCTCTGCGAGCCATAACTCGGCATCTGA...GTCAGCATGCATCAGGGCCTCTCGCCCGGGACTCCCATCAGAACTCGTTTGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034507.9
ENSMUST00000208222.2
ENSMUST00000209187.2
CDS-3UTR CCA 90 bp TGCCCCAAAGCATTCAGACCACTCCCACAGACAAGGGGGCACGCCCACTTTCACTCCGCCGTATTTGCTTaGACAACTTCCTTCTCTGGA +
Preference number: 4 (lower is better)
Translates to: CPKAFRPLPQTRGHAHFHSAVFA*TTSFSG
Trigger: TCCAGAGAAGGAAGTTGTCCAAGCAAATACGGCGGA...GTGAAAGTGGGCGTGCCCCCTTGTCTGTGGGAGTGGTCTGAATGCTTTGGGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
CDS-3UTR TCA 90 bp GGTGCGTCACAAACGAGTTCTGATGGGAGTCCCGGGCGAGAGGCCCTGATGCATCCATTGTGTTGTAGGTaGGATTGTAGACCATTCGAA +
Preference number: 4 (lower is better)
Translates to: GASQTSSDGSPGREALMHPLCCR*DCRPFE
Trigger: TTCGAATGGTCTACAATCTCACCTACAACACAATGG...ATGCATCAGGGCCTCTCGCCCGGGACTCCCATCAGAACTCGTTTGTGACGCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000208222.2
ENSMUST00000209187.2
CDS-3UTR TCA 90 bp AGCCACCCAGAACTGGCCCCAGCTGCATGGGCACGCAGCTTACTGTGCCCTCTCCATAGTCATCATACCTaGTTCCAAACATACAGTGAA +
Preference number: 4 (lower is better)
Translates to: SHPELAPAAWARSLLCPLHSHHT*FQTYSE
Trigger: TTCACTGTATGTTTGGAATCAGGTATGATGACTATG...GAGAGGGCACAGTAAGCTGCGTGCCCATGCAGCTGGGGCCAGTTCTGGGTGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
CDS-3UTR TCA 90 bp TCTGATGGGAGTCCCGGGCGAGAGGCCCTGATGCATGCTGACGCCTTCCTCCAGCATAGTCATCATACCTaGTTCCAAACATACAGTGAA +
Preference number: 4 (lower is better)
Translates to: SDGSPGREALMHADAFLQHSHHT*FQTYSE
Trigger: TTCACTGTATGTTTGGAATCAGGTATGATGACTATG...CTGGAGGAAGGCGTCAGCATGCATCAGGGCCTCTCGCCCGGGACTCCCATCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034507.9
ENSMUST00000208222.2
ENSMUST00000209187.2
CDS-3UTR TCA 90 bp ACGAGTTCTGATGGGAGTCCCGGGCGAGAGGCCCTGATGCATGCTGACGCCTTCGTTTTGACAAGTTTCTaGATGTGCTCTTTTGTGATC +
Preference number: 4 (lower is better)
Translates to: TSSDGSPGREALMHADAFVLTSF*MCSFVI
Trigger: GATCACAAAAGAGCACATTCAGAAACTTGTCAAAAC...GAAGGCGTCAGCATGCATCAGGGCCTCTCGCCCGGGACTCCCATCAGAACTCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034507.9
ENSMUST00000208222.2
CDS-3UTR TCA 90 bp AGTTCTGATGGGAGTCCCGGGCGAGAGGCCCTGATGCATGCTGACGCCTTCCTCCATAGTCATCATACCTaGTTCCAAACATACAGTGAA +
Preference number: 4 (lower is better)
Translates to: SSDGSPGREALMHADAFLHSHHT*FQTYSE
Trigger: TTCACTGTATGTTTGGAATCAGGTATGATGACTATG...GAGGAAGGCGTCAGCATGCATCAGGGCCTCTCGCCCGGGACTCCCATCAGAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034507.9
ENSMUST00000208222.2
ENSMUST00000209187.2
CDS-3UTR CCA 90 bp GCAAGTTTCTTTCTTATTCCCCACAAGACAGTCCTTTTCATAGAGGATGAGAGCTGCAGAGCAGGTAGTTaGCCGAGGCCGACGCGCTGC +
Preference number: 4 (lower is better)
Translates to: ASFFLIPHKTVLFIEDESCRAGS*PRPTRC
Trigger: GCAGCGCGTCGGCCTCGGCCAACTACCTGCTCTGCA...GCTCTCATCCTCTATGAAAAGGACTGTCTTGTGGGGAATAAGAAAGAAACTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
CDS-3UTR TCA 90 bp TTGGGAGTGAGAGAAGCTGCATTTAGATGCATGGGGTTACAGCTCTGTAGACTGGAATGTGCTCTTTTGTaGTCAGCCAGGGCCGGTGTG +
Preference number: 4 (lower is better)
Translates to: LGVREAAFRCMGLQLCRLECALL*SARAGV
Trigger: CACACCGGCCCTGGCTGATCACAAAAGAGCACATTC...CAGTCTACAGAGCTGTAACCCCATGCATCTAAATGCAGCTTCTCTCACTCCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
CDS-3UTR TCA 90 bp AATGTGTACCTCTGGTTAGGAGCCTGGCTGGAGGGGAGAAACTGCATTCCTGCCGGTCTCTCTCTGGATTaGTGCCACTACCAAAAACAA +
Preference number: 4 (lower is better)
Translates to: NVYLWLGAWLEGRNCIPAGLSLD*CHYQKQ
Trigger: TTGTTTTTGGTAGTGGCATCAATCCAGAGAGAGACC...GGCAGGAATGCAGTTTCTCCCCTCCAGCCAGGCTCCTAACCAGAGGTACACATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
3UTR CAA 72 bp CCCTCTCAGCGGCCAATCCACTGCCCATCTAGGCCCTaGCTTTACTCTTGGATCTTTAAATGTGTTAACTGG +
Preference number: 4 (lower is better)
Translates to: PSQRPIHCPSRP*LYSWIFKCVNW
Trigger: CCAGTTAACACATTTAAAGATCCAAGAGTAAAGCAAGGGCCTAGATGGGCAGTGGATTGGCCGCTGAGAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
CDS-3UTR CCA 90 bp CCACCATCTTCTTGCCTCAGGCTTTCAAGCACTGGGATTATAGGTATGAGTCACGTTCTTCTCCTCGCCTaGCAAAGTCTTCGTACCCAA +
Preference number: 4 (lower is better)
Translates to: PPSSCLRLSSTGIIGMSHVLLLA*QSLRTQ
Trigger: TTGGGTACGAAGACTTTGCCAGGCGAGGAGAAGAAC...GTGACTCATACCTATAATCCCAGTGCTTGAAAGCCTGAGGCAAGAAGATGGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
CDS-3UTR CCA 90 bp CCACCATCTTCTTGCCTCAGGCTTTCAAGCACTGGGATTATAGGTATGAGTCACCTGGGCTCGGAATGTTaGCAAATGTTCTTCTCCTCG +
Preference number: 4 (lower is better)
Translates to: PPSSCLRLSSTGIIGMSHLGSEC*QMFFSS
Trigger: CGAGGAGAAGAACATTTGCCAACATTCCGAGCCCAG...GTGACTCATACCTATAATCCCAGTGCTTGAAAGCCTGAGGCAAGAAGATGGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
CDS-3UTR CCA 90 bp CCACCATCTTCTTGCCTCAGGCTTTCAAGCACTGGGATTATAGGTATGAGTCACAAGCTCTGCGCAGTGTaGTCGTGTCAACATCCTCAT +
Preference number: 4 (lower is better)
Translates to: PPSSCLRLSSTGIIGMSHKLCAV*SCQHPH
Trigger: ATGAGGATGTTGACACGACCACACTGCGCAGAGCTT...GTGACTCATACCTATAATCCCAGTGCTTGAAAGCCTGAGGCAAGAAGATGGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
3UTR CAA 72 bp TATGTAGCCCAGGCTGGCCTCAAAACCACCATCTTCTaGCCTCAGGCTTTCAAGCACTGGGATTATAGGTAT +
Preference number: 4 (lower is better)
Translates to: YVAQAGLKTTIF*PQAFKHWDYRY
Trigger: ATACCTATAATCCCAGTGCTTGAAAGCCTGAGGCAAGAAGATGGTGGTTTTGAGGCCAGCCTGGGCTACATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
3UTR CAA 72 bp GGAAAGGAGAGTGTGCAAAGAAACATTTGGTTGGAGTaGTGGGTACCAAGTGTGGGAGCTGTAAGCAGTACT +
Preference number: 4 (lower is better)
Translates to: GKESVQRNIWLE*WVPSVGAVSST
Trigger: AGTACTGCTTACAGCTCCCACACTTGGTACCCACAACTCCAACCAAATGTTTCTTTGCACACTCTCCTTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
CDS-3UTR TCA 90 bp CCACCATCTTCTTGCCTCAGGCTTTCAAGCACTGGGATTATAGGTATGAGTCACCCATTGTGTTGTAGGTaGGATTGTAGACCATTCGAA +
Preference number: 4 (lower is better)
Translates to: PPSSCLRLSSTGIIGMSHPLCCR*DCRPFE
Trigger: TTCGAATGGTCTACAATCTCACCTACAACACAATGG...GTGACTCATACCTATAATCCCAGTGCTTGAAAGCCTGAGGCAAGAAGATGGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
3UTR CAA 72 bp CTTGTCCTTAAAGCACAGCACGAAGTAAAAATCTCATaGGCCTGTTGCAGCACACACCATCTTCATGGGACA +
Preference number: 4 (lower is better)
Translates to: LVLKAQHEVKIS*ACCSTHHLHGT
Trigger: TGTCCCATGAAGATGGTGTGTGCTGCAACAGGCCAATGAGATTTTTACTTCGTGCTGTGCTTTAAGGACAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
CDS-3UTR TCA 90 bp TTCACAAATCAACTTTTTGAGGCTGGTTCACTTAGGTTCATAAGTACATTGCTGGTCTGGCTGCAGCCATaGTGGCAATGTAGTGCCTGT +
Preference number: 4 (lower is better)
Translates to: FTNQLFEAGSLRFISTLLVWLQP*WQCSAC
Trigger: ACAGGCACTACATTGCCATCATGGCTGCAGCCAGAC...CAGCAATGTACTTATGAACCTAAGTGAACCAGCCTCAAAAAGTTGATTTGTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
CDS-3UTR CCA 90 bp AAAGTCATGAAGTTGGCATCTGACTCGTGCAGTTCAGCTACGGTCTTCATGTGTTACCAAAAACAAAGCTaGCCAAAGCGTGATAGTGAG +
Preference number: 4 (lower is better)
Translates to: KVMKLASDSCSSATVFMCYQKQS*PKRDSE
Trigger: CTCACTATCACGCTTTGGCCAGCTTTGTTTTTGGTA...ACACATGAAGACCGTAGCTGAACTGCACGAGTCAGATGCCAACTTCATGACTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
3UTR CAA 72 bp CTTTACTCTTGGATCTTTAAATGTGTTAACTGGGCATaGTCAGGTTGGCATGTTCATGCCCAGGATGGACAC +
Preference number: 4 (lower is better)
Translates to: LYSWIFKCVNWA*SGWHVHAQDGH
Trigger: GTGTCCATCCTGGGCATGAACATGCCAACCTGACAATGCCCAGTTAACACATTTAAAGATCCAAGAGTAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
3UTR CAA 72 bp AGGGTCTGCTTCGCTAGAACAAGGGTGAAGTGGCTGTaGACAAAGCTTGCTATTTTCAGAGTTGAACCTATA +
Preference number: 4 (lower is better)
Translates to: RVCFARTRVKWL*TKLAIFRVEPI
Trigger: TATAGGTTCAACTCTGAAAATAGCAAGCTTTGTCAACAGCCACTTCACCCTTGTTCTAGCGAAGCAGACCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
CDS-3UTR GCA 90 bp GAGAAACTGCATTCCTGCCTCAGTACAACATTCTCTTCCTTAATGACACTATCTAGTAGCTGTCATACATaGGCTTCGTGGTTCTCTCAG +
Preference number: 4 (lower is better)
Translates to: EKLHSCLSTTFSSLMTLSSSCHT*ASWFSQ
Trigger: CTGAGAGAACCACGAAGCGCATGTATGACAGCTACT...AGATAGTGTCATTAAGGAAGAGAATGTTGTACTGAGGCAGGAATGCAGTTTCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
3UTR CAA 72 bp GGAGCTGAGCCAATTTCTAAACAGCATTGCACTGTTTaGTTGTTGCTCGATCACACTAATGCACACAAACAC +
Preference number: 4 (lower is better)
Translates to: GAEPISKQHCTV*LLLDHTNAHKH
Trigger: GTGTTTGTGTGCATTAGTGTGATCGAGCAACAACAAAACAGTGCAATGCTGTTTAGAAATTGGCTCAGCTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
CDS-3UTR TCA 90 bp TCTTTAAAGAAACCACCCTGTCTTCAAAACCTTTTCCTCCACATGGAGGATTTTTCTTCCCTGTCTTCCTaGAGCCTTTTCATCCTTTCC +
Preference number: 4 (lower is better)
Translates to: SLKKPPCLQNLFLHMEDFSSLSS*SLFILS
Trigger: GGAAAGGATGAAAAGGCTTCAGGAAGACAGGGAAGA...AAAATCCTCCATGTGGAGGAAAAGGTTTTGAAGACAGGGTGGTTTCTTTAAAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
CDS-3UTR CCA 90 bp TTTAAGGCCCAAACACCACCAATCAAACTGTTGTCTAAAACACTACCTCATTTGTCATTTCTTCCCGAGTaGTCTCGTCATCTTCCCTGT +
Preference number: 4 (lower is better)
Translates to: FKAQTPPIKLLSKTLPHLSFLPE*SRHLPC
Trigger: ACAGGGAAGATGACGAGACCACTCGGGAAGAAATGA...CAAATGAGGTAGTGTTTTAGACAACAGTTTGATTGGTGGTGTTTGGGCCTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
3UTR CAA 72 bp GCTGAGCCAATTTCTAAACAGCATTGCACTGTTTTGTaGTTGCTCGATCACACTAATGCACACAAACACAAG +
Preference number: 4 (lower is better)
Translates to: AEPISKQHCTVL*LLDHTNAHKHK
Trigger: CTTGTGTTTGTGTGCATTAGTGTGATCGAGCAACAACAAAACAGTGCAATGCTGTTTAGAAATTGGCTCAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
3UTR CAA 72 bp ATCTTCATGGGACACACAGGATCTGCCCTCTTTTCCTaGCCTTTGAGTTTAAAGAAGTCTTACTATCGTGTA +
Preference number: 4 (lower is better)
Translates to: IFMGHTGSALFS*PLSLKKSYYRV
Trigger: TACACGATAGTAAGACTTCTTTAAACTCAAAGGCAAGGAAAAGAGGGCAGATCCTGTGTGTCCCATGAAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
3UTR CAA 72 bp ATGTGTTTTAAGGCCCAAACACCACCAATCAAACTGTaGTCTAAAACACTACCTCATTTGTCTGCCAGGAAT +
Preference number: 4 (lower is better)
Translates to: MCFKAQTPPIKL*SKTLPHLSARN
Trigger: ATTCCTGGCAGACAAATGAGGTAGTGTTTTAGACAACAGTTTGATTGGTGGTGTTTGGGCCTTAAAACACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
3UTR CAA 72 bp GAGCCAATTTCTAAACAGCATTGCACTGTTTTGTTGTaGCTCGATCACACTAATGCACACAAACACAAGTTT +
Preference number: 4 (lower is better)
Translates to: EPISKQHCTVLL*LDHTNAHKHKF
Trigger: AAACTTGTGTTTGTGTGCATTAGTGTGATCGAGCAACAACAAAACAGTGCAATGCTGTTTAGAAATTGGCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
CDS GCA 90 bp ACACTCGGATTCTTTTGTCCTTCCGCAGCACTTTCCGGCAGTTGGTaGAGAGCAGGTAGTTGGCCGAGGCCGACGCGCTGCTGCCACCGC +
Preference number: 5 (lower is better)
Translates to: TLGFFCPSAALSGSW*RAGSWPRPTRCCHR
Trigger: GCGGTGGCAGCAGCGCGTCGGCCTCGGCCAACTACCTGCTCTGCACCAACTGCCGGAAAGTGCTGCGGAAGGACAAAAGAATCCGAGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
CDS CCA 90 bp GAGACACTCGGATTCTTTTGTCCTTCCGCAGCACTTTCCGGCAGTTaGTGCAGAGCAGGTAGTTGGCCGAGGCCGACGCGCTGCTGCCAC +
Preference number: 5 (lower is better)
Translates to: ETLGFFCPSAALSGS*CRAGSWPRPTRCCH
Trigger: GTGGCAGCAGCGCGTCGGCCTCGGCCAACTACCTGCTCTGCACCAACTGCCGGAAAGTGCTGCGGAAGGACAAAAGAATCCGAGTGTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
CDS-3UTR CAA 90 bp TCTGATGGGAGTCCCGGGCGAGAGGCCCTGATGCATGCTGACGCCTTCCTCCAGCCTGGGCTCGGAATGTaGGCAAATGTTCTTCTCCTC +
Preference number: 5 (lower is better)
Translates to: SDGSPGREALMHADAFLQPGLGM*ANVLLL
Trigger: GAGGAGAAGAACATTTGCCAACATTCCGAGCCCAGG...CTGGAGGAAGGCGTCAGCATGCATCAGGGCCTCTCGCCCGGGACTCCCATCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034507.9
ENSMUST00000208222.2
ENSMUST00000209187.2
CDS-3UTR CAA 90 bp ACGAGTTCTGATGGGAGTCCCGGGCGAGAGGCCCTGATGCATGCTGACGCCTTCTCGATGCTGTTGTCATaGGCCAGGTCACACACACAG +
Preference number: 5 (lower is better)
Translates to: TSSDGSPGREALMHADAFSMLLS*ARSHTQ
Trigger: CTGTGTGTGTGACCTGGCCAATGACAACAGCATCGA...GAAGGCGTCAGCATGCATCAGGGCCTCTCGCCCGGGACTCCCATCAGAACTCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034507.9
ENSMUST00000208222.2
ENSMUST00000209187.2
CDS-3UTR CAA 90 bp ACGAGTTCTGATGGGAGTCCCGGGCGAGAGGCCCTGATGCATGCTGACGCCTTCATCACCTGTGTGATGTaGTCCAGGCGACCGGATGTA +
Preference number: 5 (lower is better)
Translates to: TSSDGSPGREALMHADAFITCVM*SRRPDV
Trigger: TACATCCGGTCGCCTGGACAACATCACACAGGTGAT...GAAGGCGTCAGCATGCATCAGGGCCTCTCGCCCGGGACTCCCATCAGAACTCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
CDS-3UTR CAA 90 bp ACGAGTTCTGATGGGAGTCCCGGGCGAGAGGCCCTGATGCATGCTGACGCCTTCATTAGTCTGAACCCATaGGCGATTCCTGGGTCTCTC +
Preference number: 5 (lower is better)
Translates to: TSSDGSPGREALMHADAFISLNP*AIPGSL
Trigger: GAGAGACCCAGGAATCGCCAATGGGTTCAGACTAAT...GAAGGCGTCAGCATGCATCAGGGCCTCTCGCCCGGGACTCCCATCAGAACTCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034507.9
ENSMUST00000208222.2
ENSMUST00000209187.2
CDS-3UTR CAA 90 bp AGTTCTGATGGGAGTCCCGGGCGAGAGGCCCTGATGCATGCTGACGCCTTCCTCCTTCGTACCCAAAGCTaGGGTCTTCAATGTATCGAG +
Preference number: 5 (lower is better)
Translates to: SSDGSPGREALMHADAFLLRTQS*GLQCIE
Trigger: CTCGATACATTGAAGACCCAAGCTTTGGGTACGAAG...GAGGAAGGCGTCAGCATGCATCAGGGCCTCTCGCCCGGGACTCCCATCAGAACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034507.9
ENSMUST00000208222.2
ENSMUST00000209187.2
CDS-3UTR CAA 90 bp CAAACGAGTTCTGATGGGAGTCCCGGGCGAGAGGCCCTGATGCATGCTGACGCCCTTCGTACCCAAAGCTaGGGTCTTCAATGTATCGAG +
Preference number: 5 (lower is better)
Translates to: QTSSDGSPGREALMHADALRTQS*GLQCIE
Trigger: CTCGATACATTGAAGACCCAAGCTTTGGGTACGAAG...GGCGTCAGCATGCATCAGGGCCTCTCGCCCGGGACTCCCATCAGAACTCGTTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034507.9
ENSMUST00000208222.2
ENSMUST00000209187.2
CDS-3UTR CAA 90 bp TCACAAACGAGTTCTGATGGGAGTCCCGGGCGAGAGGCCCTGATGCATGCTGACCCTGGGCTCGGAATGTaGGCAAATGTTCTTCTCCTC +
Preference number: 5 (lower is better)
Translates to: SQTSSDGSPGREALMHADPGLGM*ANVLLL
Trigger: GAGGAGAAGAACATTTGCCAACATTCCGAGCCCAGG...GTCAGCATGCATCAGGGCCTCTCGCCCGGGACTCCCATCAGAACTCGTTTGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034507.9
ENSMUST00000208222.2
ENSMUST00000209187.2
CDS-3UTR CAA 90 bp AGTTCTGATGGGAGTCCCGGGCGAGAGGCCCTGATGCATGCTGACGCCTTCCTCTCCTCTTGTCAGGGGTaGAGACACTCGGATTCTTTT +
Preference number: 5 (lower is better)
Translates to: SSDGSPGREALMHADAFLSSCQG*RHSDSF
Trigger: AAAAGAATCCGAGTGTCTCAACCCCTGACAAGAGGA...GAGGAAGGCGTCAGCATGCATCAGGGCCTCTCGCCCGGGACTCCCATCAGAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
CDS TCA 90 bp CATGCATGTTTATTAGGTAGGAACACTGGTGTCTGGCTGCAGCCATaGTGGCAATGTAGTGCCTGTCTGGGAGGGGAAGGGGGCCGTCCA +
Preference number: 5 (lower is better)
Translates to: HACLLGRNTGVWLQP*WQCSACLGGEGGRP
Trigger: TGGACGGCCCCCTTCCCCTCCCAGACAGGCACTACATTGCCATCATGGCTGCAGCCAGACACCAGTGTTCCTACCTAATAAACATGCATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000034507.9
ENSMUST00000208222.2
CDS GCA 90 bp CCATTAAGGCTTCCAGCTCGCCTAGGGAATCCACAATCCCAAAGTTaGTGCCCGCCAGGGAGGTGTTCTCGATGCTGTTGTCATTGGCCA +
Preference number: 5 (lower is better)
Translates to: PLRLPARLGNPQSQS*CPPGRCSRCCCHWP
Trigger: TGGCCAATGACAACAGCATCGAGAACACCTCCCTGGCGGGCAGCAACTTTGGGATTGTGGATTCCCTAGGCGAGCTGGAAGCCTTAATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034507.9
ENSMUST00000208222.2
ENSMUST00000209187.2
CDS-3UTR CAA 90 bp TCACAAACGAGTTCTGATGGGAGTCCCGGGCGAGAGGCCCTGATGCATGCTGACATTAGTCTGAACCCATaGGCGATTCCTGGGTCTCTC +
Preference number: 5 (lower is better)
Translates to: SQTSSDGSPGREALMHADISLNP*AIPGSL
Trigger: GAGAGACCCAGGAATCGCCAATGGGTTCAGACTAAT...GTCAGCATGCATCAGGGCCTCTCGCCCGGGACTCCCATCAGAACTCGTTTGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034507.9
ENSMUST00000208222.2
ENSMUST00000209187.2
CDS-3UTR CAA 90 bp AGTTCTGATGGGAGTCCCGGGCGAGAGGCCCTGATGCATGCTGACGCCTTCCTCCTTCCACAAGAAAGTTaGTTCGTTCATCCGCCGTAT +
Preference number: 5 (lower is better)
Translates to: SSDGSPGREALMHADAFLLPQES*FVHPPY
Trigger: ATACGGCGGATGAACGAACAAACTTTCTTGTGGAAG...GAGGAAGGCGTCAGCATGCATCAGGGCCTCTCGCCCGGGACTCCCATCAGAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
CDS GCA 90 bp AATCCACAATCCCAAAGTTGCTGCCCGCCAGGGAGGTGTTCTCGATaGTGTTGTCATTGGCCAGGTCACACACACAGAAGCTGCTCACAG +
Preference number: 5 (lower is better)
Translates to: NPQSQSCCPPGRCSR*CCHWPGHTHRSCSQ
Trigger: CTGTGAGCAGCTTCTGTGTGTGTGACCTGGCCAATGACAACAGCATCGAGAACACCTCCCTGGCGGGCAGCAACTTTGGGATTGTGGATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034507.9
ENSMUST00000208222.2
ENSMUST00000209187.2
CDS-3UTR CAA 90 bp TCTGATGGGAGTCCCGGGCGAGAGGCCCTGATGCATGCTGACGCCTTCCTCCAGAAGATTTCTCAGTCTTaGTGGTACATATTCCAAGCC +
Preference number: 5 (lower is better)
Translates to: SDGSPGREALMHADAFLQKISQS*WYIFQA
Trigger: GGCTTGGAATATGTACCACAAAGACTGAGAAATCTT...CTGGAGGAAGGCGTCAGCATGCATCAGGGCCTCTCGCCCGGGACTCCCATCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034507.9
ENSMUST00000208222.2
CDS TCA 90 bp GTGCTTCCATCAGAAGCAGATTCACGTGGACCTTCTCTGAGTGAGTaGACTGGCGCCAGTAGCTGTCATACATGCGCTTCGTGGTTCTCT +
Preference number: 5 (lower is better)
Translates to: VLPSEADSRGPSLSE*TGASSCHTCASWFS
Trigger: AGAGAACCACGAAGCGCATGTATGACAGCTACTGGCGCCAGTTCACTCACTCAGAGAAGGTCCACGTGAATCTGCTTCTGATGGAAGCAC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034507.9
ENSMUST00000208222.2
ENSMUST00000209187.2
CDS TCA 90 bp CTCATCCAGGAGATGTCCAATGTCAGAGTAAAGCCTGTTCACCAGTaGGAACCCATGGTTTTCCCAGGTGTAGTCCTGGGCTCGGAATGT +
Preference number: 5 (lower is better)
Translates to: LIQEMSNVRVKPVHQ*EPMVFPGVVLGSEC
Trigger: ACATTCCGAGCCCAGGACTACACCTGGGAAAACCATGGGTTCTCACTGGTGAACAGGCTTTACTCTGACATTGGACATCTCCTGGATGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034507.9
ENSMUST00000208222.2
ENSMUST00000209187.2
CDS TCA 90 bp ACTTCCTTCTCTGGAATAAAGGCACTTGGTCCTCTTGTCAGGGGTTaGGACACTCGGATTCTTTTGTCCTTCCGCAGCACTTTCCGGCAG +
Preference number: 5 (lower is better)
Translates to: TSFSGIKALGPLVRG*DTRILLSFRSTFRQ
Trigger: CTGCCGGAAAGTGCTGCGGAAGGACAAAAGAATCCGAGTGTCTCAACCCCTGACAAGAGGACCAAGTGCCTTTATTCCAGAGAAGGAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
CDS-3UTR CAA 90 bp ACAAGAAGCTCTCATGGGTTCTGTTATCTTCATAACTGCCGACGCATGTGGAGGAGGCACTTGGTCCTCTaGTCAGGGGTTGAGACACTC +
Preference number: 5 (lower is better)
Translates to: TRSSHGFCYLHNCRRMWRRHLVL*SGVETL
Trigger: GAGTGTCTCAACCCCTGACAAGAGGACCAAGTGCCT...CCTCCACATGCGTCGGCAGTTATGAAGATAACAGAACCCATGAGAGCTTCTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
CDS CCA 90 bp TGTAGTCCTGGGCTCGGAATGTTGGCAAATGTTCTTCTCCTCGCCTaGCAAAGTCTTCGTACCCAAAGCTTGGGTCTTCAATGTATCGAG +
Preference number: 5 (lower is better)
Translates to: CSPGLGMLANVLLLA*QSLRTQSLGLQCIE
Trigger: CTCGATACATTGAAGACCCAAGCTTTGGGTACGAAGACTTTGCCAGGCGAGGAGAAGAACATTTGCCAACATTCCGAGCCCAGGACTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034507.9
ENSMUST00000208222.2
ENSMUST00000209187.2
CDS-3UTR CAA 90 bp TTGGGAGTGAGAGAAGCTGCATTTAGATGCATGGGGTTACAGCTCTGTAGACTGCCTGGGCTCGGAATGTaGGCAAATGTTCTTCTCCTC +
Preference number: 5 (lower is better)
Translates to: LGVREAAFRCMGLQLCRLPGLGM*ANVLLL
Trigger: GAGGAGAAGAACATTTGCCAACATTCCGAGCCCAGG...CAGTCTACAGAGCTGTAACCCCATGCATCTAAATGCAGCTTCTCTCACTCCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
CDS TCA 90 bp GTGTGGTCGTGTCAACATCCTCATGGGTGGCCATTGTGTTGTAGGTaGGATTGTAGACCATTCGAAACTTCTCATCCAGGAGATGTCCAA +
Preference number: 5 (lower is better)
Translates to: VWSCQHPHGWPLCCR*DCRPFETSHPGDVQ
Trigger: TTGGACATCTCCTGGATGAGAAGTTTCGAATGGTCTACAATCTCACCTACAACACAATGGCCACCCATGAGGATGTTGACACGACCACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034507.9
ENSMUST00000208222.2
ENSMUST00000209187.2
CDS-3UTR CAA 90 bp CCACCATCTTCTTGCCTCAGGCTTTCAAGCACTGGGATTATAGGTATGAGTCACCTTCGTACCCAAAGCTaGGGTCTTCAATGTATCGAG +
Preference number: 5 (lower is better)
Translates to: PPSSCLRLSSTGIIGMSHLRTQS*GLQCIE
Trigger: CTCGATACATTGAAGACCCAAGCTTTGGGTACGAAG...GTGACTCATACCTATAATCCCAGTGCTTGAAAGCCTGAGGCAAGAAGATGGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
CDS CCA 90 bp CAAATGTTCTTCTCCTCGCCTGGCAAAGTCTTCGTACCCAAAGCTTaGGTCTTCAATGTATCGAGAGACATCGGCTGTTACAATCACATC +
Preference number: 5 (lower is better)
Translates to: QMFFSSPGKVFVPKA*VFNVSRDIGCYNHI
Trigger: GATGTGATTGTAACAGCCGATGTCTCTCGATACATTGAAGACCCAAGCTTTGGGTACGAAGACTTTGCCAGGCGAGGAGAAGAACATTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034507.9
ENSMUST00000208222.2
ENSMUST00000209187.2
CDS GCA 90 bp GACAAGTTTCTGAATGTGCTCTTTTGTGATCAGCCAGGGCCGGTGTaGCAGCAGCTTGTTAATTTCATTAAGATTTCTCAGTCTTTGTGG +
Preference number: 5 (lower is better)
Translates to: DKFLNVLFCDQPGPV*QQLVNFIKISQSLW
Trigger: CCACAAAGACTGAGAAATCTTAATGAAATTAACAAGCTGCTGGCACACCGGCCCTGGCTGATCACAAAAGAGCACATTCAGAAACTTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034507.9
ENSMUST00000208222.2
CDS TCA 90 bp CGAGAGACATCGGCTGTTACAATCACATCATCTTCAAAATCTGAGTaGGGAAACGCATGTAAAGTTTCTCCAGGGACCACAAAGAGACTT +
Preference number: 5 (lower is better)
Translates to: RETSAVTITSSSKSE*GNACKVSPGTTKRL
Trigger: AAGTCTCTTTGTGGTCCCTGGAGAAACTTTACATGCGTTTCCTCACTCAGATTTTGAAGATGATGTGATTGTAACAGCCGATGTCTCTCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034507.9
ENSMUST00000208222.2
ENSMUST00000209187.2
CDS-3UTR CAA 90 bp GCAAGTTTCTTTCTTATTCCCCACAAGACAGTCCTTTTCATAGAGGATGAGAGCAAGATTTCTCAGTCTTaGTGGTACATATTCCAAGCC +
Preference number: 5 (lower is better)
Translates to: ASFFLIPHKTVLFIEDESKISQS*WYIFQA
Trigger: GGCTTGGAATATGTACCACAAAGACTGAGAAATCTT...GCTCTCATCCTCTATGAAAAGGACTGTCTTGTGGGGAATAAGAAAGAAACTTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
CDS CCA 72 bp GCAGCACTTTCCGGCAGTTGGTGCAGAGCAGGTAGTTaGCCGAGGCCGACGCGCTGCTGCCACCGCGGTTCA +
Preference number: 6 (lower is better)
Translates to: AALSGSWCRAGS*PRPTRCCHRGS
Trigger: TGAACCGCGGTGGCAGCAGCGCGTCGGCCTCGGCCAACTACCTGCTCTGCACCAACTGCCGGAAAGTGCTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
CDS GCA 72 bp TTCTTTTGTCCTTCCGCAGCACTTTCCGGCAGTTGGTaGAGAGCAGGTAGTTGGCCGAGGCCGACGCGCTGC +
Preference number: 6 (lower is better)
Translates to: FFCPSAALSGSW*RAGSWPRPTRC
Trigger: GCAGCGCGTCGGCCTCGGCCAACTACCTGCTCTGCACCAACTGCCGGAAAGTGCTGCGGAAGGACAAAAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
CDS CCA 72 bp GGATTCTTTTGTCCTTCCGCAGCACTTTCCGGCAGTTaGTGCAGAGCAGGTAGTTGGCCGAGGCCGACGCGC +
Preference number: 6 (lower is better)
Translates to: GFFCPSAALSGS*CRAGSWPRPTR
Trigger: GCGCGTCGGCCTCGGCCAACTACCTGCTCTGCACCAACTGCCGGAAAGTGCTGCGGAAGGACAAAAGAATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
CDS CAA 72 bp CTGCCCGCCAGGGAGGTGTTCTCGATGCTGTTGTCATaGGCCAGGTCACACACACAGAAGCTGCTCACAGAG +
Preference number: 6 (lower is better)
Translates to: LPAREVFSMLLS*ARSHTQKLLTE
Trigger: CTCTGTGAGCAGCTTCTGTGTGTGTGACCTGGCCAATGACAACAGCATCGAGAACACCTCCCTGGCGGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034507.9
ENSMUST00000208222.2
ENSMUST00000209187.2
CDS GCA 72 bp CCAGCTCGCCTAGGGAATCCACAATCCCAAAGTTGCTaGCCGCCAGGGAGGTGTTCTCGATGCTGTTGTCAT +
Preference number: 6 (lower is better)
Translates to: PARLGNPQSQSC*PPGRCSRCCCH
Trigger: ATGACAACAGCATCGAGAACACCTCCCTGGCGGGCAGCAACTTTGGGATTGTGGATTCCCTAGGCGAGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034507.9
ENSMUST00000208222.2
ENSMUST00000209187.2
CDS CAA 72 bp AAGTTGCTGCCCGCCAGGGAGGTGTTCTCGATGCTGTaGTCATTGGCCAGGTCACACACACAGAAGCTGCTC +
Preference number: 6 (lower is better)
Translates to: KLLPAREVFSML*SLARSHTQKLL
Trigger: GAGCAGCTTCTGTGTGTGTGACCTGGCCAATGACAACAGCATCGAGAACACCTCCCTGGCGGGCAGCAACTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034507.9
ENSMUST00000208222.2
ENSMUST00000209187.2
CDS CAA 90 bp TCCATTAAGGCTTCCAGCTCGCCTAGGGAATCCACAATCCCAAAGTaGCTGCCCGCCAGGGAGGTGTTCTCGATGCTGTTGTCATTGGCC +
Preference number: 6 (lower is better)
Translates to: SIKASSSPRESTIPK*LPAREVFSMLLSLA
Trigger: GGCCAATGACAACAGCATCGAGAACACCTCCCTGGCGGGCAGCAACTTTGGGATTGTGGATTCCCTAGGCGAGCTGGAAGCCTTAATGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034507.9
ENSMUST00000208222.2
ENSMUST00000209187.2
CDS CAA 90 bp CCAAAGTTGCTGCCCGCCAGGGAGGTGTTCTCGATGCTGTTGTCATaGGCCAGGTCACACACACAGAAGCTGCTCACAGAGATTAGTCTG +
Preference number: 6 (lower is better)
Translates to: PKLLPAREVFSMLLS*ARSHTQKLLTEISL
Trigger: CAGACTAATCTCTGTGAGCAGCTTCTGTGTGTGTGACCTGGCCAATGACAACAGCATCGAGAACACCTCCCTGGCGGGCAGCAACTTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034507.9
ENSMUST00000208222.2
ENSMUST00000209187.2
CDS CAA 90 bp ACAATCCCAAAGTTGCTGCCCGCCAGGGAGGTGTTCTCGATGCTGTaGTCATTGGCCAGGTCACACACACAGAAGCTGCTCACAGAGATT +
Preference number: 6 (lower is better)
Translates to: TIPKLLPAREVFSML*SLARSHTQKLLTEI
Trigger: AATCTCTGTGAGCAGCTTCTGTGTGTGTGACCTGGCCAATGACAACAGCATCGAGAACACCTCCCTGGCGGGCAGCAACTTTGGGATTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034507.9
ENSMUST00000208222.2
ENSMUST00000209187.2
CDS TCA 72 bp TCAGAAGCAGATTCACGTGGACCTTCTCTGAGTGAGTaGACTGGCGCCAGTAGCTGTCATACATGCGCTTCG +
Preference number: 6 (lower is better)
Translates to: SEADSRGPSLSE*TGASSCHTCAS
Trigger: CGAAGCGCATGTATGACAGCTACTGGCGCCAGTTCACTCACTCAGAGAAGGTCCACGTGAATCTGCTTCTGA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034507.9
ENSMUST00000208222.2
ENSMUST00000209187.2
CDS TCA 72 bp GGTCACACACACAGAAGCTGCTCACAGAGATTAGTCTaGACCCATTGGCGATTCCTGGGTCTCTCTCTGGAT +
Preference number: 6 (lower is better)
Translates to: GHTHRSCSQRLV*THWRFLGLSLD
Trigger: ATCCAGAGAGAGACCCAGGAATCGCCAATGGGTTCAGACTAATCTCTGTGAGCAGCTTCTGTGTGTGTGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034507.9
ENSMUST00000208222.2
ENSMUST00000209187.2
CDS TCA 72 bp GAGATGTCCAATGTCAGAGTAAAGCCTGTTCACCAGTaGGAACCCATGGTTTTCCCAGGTGTAGTCCTGGGC +
Preference number: 6 (lower is better)
Translates to: EMSNVRVKPVHQ*EPMVFPGVVLG
Trigger: GCCCAGGACTACACCTGGGAAAACCATGGGTTCTCACTGGTGAACAGGCTTTACTCTGACATTGGACATCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034507.9
ENSMUST00000208222.2
ENSMUST00000209187.2
CDS CCA 72 bp GGGCTCGGAATGTTGGCAAATGTTCTTCTCCTCGCCTaGCAAAGTCTTCGTACCCAAAGCTTGGGTCTTCAA +
Preference number: 6 (lower is better)
Translates to: GLGMLANVLLLA*QSLRTQSLGLQ
Trigger: TTGAAGACCCAAGCTTTGGGTACGAAGACTTTGCCAGGCGAGGAGAAGAACATTTGCCAACATTCCGAGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034507.9
ENSMUST00000208222.2
ENSMUST00000209187.2
CDS CCA 72 bp ATGGTTTTCCCAGGTGTAGTCCTGGGCTCGGAATGTTaGCAAATGTTCTTCTCCTCGCCTGGCAAAGTCTTC +
Preference number: 6 (lower is better)
Translates to: MVFPGVVLGSEC*QMFFSSPGKVF
Trigger: GAAGACTTTGCCAGGCGAGGAGAAGAACATTTGCCAACATTCCGAGCCCAGGACTACACCTGGGAAAACCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034507.9
ENSMUST00000208222.2
ENSMUST00000209187.2
CDS CAA 72 bp CATGGTTTTCCCAGGTGTAGTCCTGGGCTCGGAATGTaGGCAAATGTTCTTCTCCTCGCCTGGCAAAGTCTT +
Preference number: 6 (lower is better)
Translates to: HGFPRCSPGLGM*ANVLLLAWQSL
Trigger: AAGACTTTGCCAGGCGAGGAGAAGAACATTTGCCAACATTCCGAGCCCAGGACTACACCTGGGAAAACCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034507.9
ENSMUST00000208222.2
ENSMUST00000209187.2
CDS CAA 90 bp AACTTCCTTCTCTGGAATAAAGGCACTTGGTCCTCTTGTCAGGGGTaGAGACACTCGGATTCTTTTGTCCTTCCGCAGCACTTTCCGGCA +
Preference number: 6 (lower is better)
Translates to: NFLLWNKGTWSSCQG*RHSDSFVLPQHFPA
Trigger: TGCCGGAAAGTGCTGCGGAAGGACAAAAGAATCCGAGTGTCTCAACCCCTGACAAGAGGACCAAGTGCCTTTATTCCAGAGAAGGAAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
CDS TCA 72 bp TCTGGAATAAAGGCACTTGGTCCTCTTGTCAGGGGTTaGGACACTCGGATTCTTTTGTCCTTCCGCAGCACT +
Preference number: 6 (lower is better)
Translates to: SGIKALGPLVRG*DTRILLSFRST
Trigger: AGTGCTGCGGAAGGACAAAAGAATCCGAGTGTCTCAACCCCTGACAAGAGGACCAAGTGCCTTTATTCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
CDS CCA 72 bp TTCTCCTCGCCTGGCAAAGTCTTCGTACCCAAAGCTTaGGTCTTCAATGTATCGAGAGACATCGGCTGTTAC +
Preference number: 6 (lower is better)
Translates to: FSSPGKVFVPKA*VFNVSRDIGCY
Trigger: GTAACAGCCGATGTCTCTCGATACATTGAAGACCCAAGCTTTGGGTACGAAGACTTTGCCAGGCGAGGAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034507.9
ENSMUST00000208222.2
ENSMUST00000209187.2
CDS CAA 72 bp ACACAGAAGCTGCTCACAGAGATTAGTCTGAACCCATaGGCGATTCCTGGGTCTCTCTCTGGATTGATGCCA +
Preference number: 6 (lower is better)
Translates to: TQKLLTEISLNP*AIPGSLSGLMP
Trigger: TGGCATCAATCCAGAGAGAGACCCAGGAATCGCCAATGGGTTCAGACTAATCTCTGTGAGCAGCTTCTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034507.9
ENSMUST00000208222.2
ENSMUST00000209187.2
CDS CAA 72 bp CTTCTCCTCGCCTGGCAAAGTCTTCGTACCCAAAGCTaGGGTCTTCAATGTATCGAGAGACATCGGCTGTTA +
Preference number: 6 (lower is better)
Translates to: LLLAWQSLRTQS*GLQCIERHRLL
Trigger: TAACAGCCGATGTCTCTCGATACATTGAAGACCCAAGCTTTGGGTACGAAGACTTTGCCAGGCGAGGAGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034507.9
ENSMUST00000208222.2
ENSMUST00000209187.2
CDS CAA 90 bp AGGTCACACACACAGAAGCTGCTCACAGAGATTAGTCTGAACCCATaGGCGATTCCTGGGTCTCTCTCTGGATTGATGCCACTACCAAAA +
Preference number: 6 (lower is better)
Translates to: RSHTQKLLTEISLNP*AIPGSLSGLMPLPK
Trigger: TTTTGGTAGTGGCATCAATCCAGAGAGAGACCCAGGAATCGCCAATGGGTTCAGACTAATCTCTGTGAGCAGCTTCTGTGTGTGTGACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034507.9
ENSMUST00000208222.2
ENSMUST00000209187.2
CDS CCA 72 bp TGCTTGGACAACTTCCTTCTCTGGAATAAAGGCACTTaGTCCTCTTGTCAGGGGTTGAGACACTCGGATTCT +
Preference number: 6 (lower is better)
Translates to: CLDNFLLWNKGT*SSCQGLRHSDS
Trigger: AGAATCCGAGTGTCTCAACCCCTGACAAGAGGACCAAGTGCCTTTATTCCAGAGAAGGAAGTTGTCCAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000208222.2
CDS CAA 90 bp CCGGTGTGCCAGCAGCTTGTTAATTTCATTAAGATTTCTCAGTCTTaGTGGTACATATTCCAAGCCATTCAGCCACTCAGCGATCCCTCC +
Preference number: 6 (lower is better)
Translates to: PVCQQLVNFIKISQS*WYIFQAIQPLSDPS
Trigger: GGAGGGATCGCTGAGTGGCTGAATGGCTTGGAATATGTACCACAAAGACTGAGAAATCTTAATGAAATTAACAAGCTGCTGGCACACCGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034507.9
ENSMUST00000208222.2
CDS CAA 90 bp GCAAATGTTCTTCTCCTCGCCTGGCAAAGTCTTCGTACCCAAAGCTaGGGTCTTCAATGTATCGAGAGACATCGGCTGTTACAATCACAT +
Preference number: 6 (lower is better)
Translates to: ANVLLLAWQSLRTQS*GLQCIERHRLLQSH
Trigger: ATGTGATTGTAACAGCCGATGTCTCTCGATACATTGAAGACCCAAGCTTTGGGTACGAAGACTTTGCCAGGCGAGGAGAAGAACATTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034507.9
ENSMUST00000208222.2
ENSMUST00000209187.2
CDS TCA 72 bp TGTCAACATCCTCATGGGTGGCCATTGTGTTGTAGGTaGGATTGTAGACCATTCGAAACTTCTCATCCAGGA +
Preference number: 6 (lower is better)
Translates to: CQHPHGWPLCCR*DCRPFETSHPG
Trigger: TCCTGGATGAGAAGTTTCGAATGGTCTACAATCTCACCTACAACACAATGGCCACCCATGAGGATGTTGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000034507.9
ENSMUST00000208222.2
ENSMUST00000209187.2
CDS GCA 72 bp CTGAATGTGCTCTTTTGTGATCAGCCAGGGCCGGTGTaGCAGCAGCTTGTTAATTTCATTAAGATTTCTCAG +
Preference number: 6 (lower is better)
Translates to: LNVLFCDQPGPV*QQLVNFIKISQ
Trigger: CTGAGAAATCTTAATGAAATTAACAAGCTGCTGGCACACCGGCCCTGGCTGATCACAAAAGAGCACATTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034507.9
ENSMUST00000208222.2
CDS CAA 72 bp TCTTTTGTGATCAGCCAGGGCCGGTGTGCCAGCAGCTaGTTAATTTCATTAAGATTTCTCAGTCTTTGTGGT +
Preference number: 6 (lower is better)
Translates to: SFVISQGRCASS*LISLRFLSLCG
Trigger: ACCACAAAGACTGAGAAATCTTAATGAAATTAACAAGCTGCTGGCACACCGGCCCTGGCTGATCACAAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034507.9
ENSMUST00000208222.2
CDS TCA 72 bp TCGGCTGTTACAATCACATCATCTTCAAAATCTGAGTaGGGAAACGCATGTAAAGTTTCTCCAGGGACCACA +
Preference number: 6 (lower is better)
Translates to: SAVTITSSSKSE*GNACKVSPGTT
Trigger: TGTGGTCCCTGGAGAAACTTTACATGCGTTTCCTCACTCAGATTTTGAAGATGATGTGATTGTAACAGCCGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000034507.9
ENSMUST00000208222.2
ENSMUST00000209187.2