Pregenerated sensors for SESN1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038332Ensembl transcript IDs: ENSMUST00000041438.7, ENSMUST00000099931.11
Found 118 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCGAGGTCAGCAGGGCATGGGGCAGAATGCACCTGGCACTCCCTGTaGAGCAGACTGCAACCACATTTTCCACATTGTTGGCACCGGAAC | + |
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Preference number: 1 (lower is better) Translates to: PRSAGHGAECTWHSL*SRLQPHFPHCWHRN Trigger: GTTCCGGTGCCAACAATGTGGAAAATGTGGTTGCAGTCTGCTGCACAGGGAGTGCCAGGTGCATTCTGCCCCATGCCCTGCTGACCTCGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041438.7 ENSMUST00000099931.11 |
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| 3UTR GCA 90 bp | ACCTTCAAAGTCAGGGTCCCGAGGTCAGCAGGGCATGGGGCAGAATaGACCTGGCACTCCCTGTGCAGCAGACTGCAACCACATTTTCCA | + |
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Preference number: 1 (lower is better) Translates to: TFKVRVPRSAGHGAE*TWHSLCSRLQPHFP Trigger: TGGAAAATGTGGTTGCAGTCTGCTGCACAGGGAGTGCCAGGTGCATTCTGCCCCATGCCCTGCTGACCTCGGGACCCTGACTTTGAAGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041438.7 ENSMUST00000099931.11 |
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| 3UTR CCA 90 bp | TGGCACTCCCTGTGCAGCAGACTGCAACCACATTTTCCACATTGTTaGCACCGGAACCAAAAATCCCGCACAAGACAGCTGTCCTCCAGG | + |
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Preference number: 1 (lower is better) Translates to: WHSLCSRLQPHFPHC*HRNQKSRTRQLSSR Trigger: CCTGGAGGACAGCTGTCTTGTGCGGGATTTTTGGTTCCGGTGCCAACAATGTGGAAAATGTGGTTGCAGTCTGCTGCACAGGGAGTGCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041438.7 ENSMUST00000099931.11 |
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| 3UTR CCA 90 bp | ACAAGTTCACAGCATCTCGTGCTGTCTGTCAAAAAGCAAACACTGTaGCCGGCAGCCTTTCTTCCCAGCTCTAACACCAAAGCTGCCGAG | + |
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Preference number: 1 (lower is better) Translates to: TSSQHLVLSVKKQTL*PAAFLPSSNTKAAE Trigger: CTCGGCAGCTTTGGTGTTAGAGCTGGGAAGAAAGGCTGCCGGCCACAGTGTTTGCTTTTTGACAGACAGCACGAGATGCTGTGAACTTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041438.7 ENSMUST00000099931.11 |
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| 3UTR GCA 90 bp | GGAGATTTACTAGTTGCTGTATTGAAACAAGTTCACAGCATCTCGTaGTGTCTGTCAAAAAGCAAACACTGTGGCCGGCAGCCTTTCTTC | + |
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Preference number: 1 (lower is better) Translates to: GDLLVAVLKQVHSIS*CLSKSKHCGRQPFF Trigger: GAAGAAAGGCTGCCGGCCACAGTGTTTGCTTTTTGACAGACAGCACGAGATGCTGTGAACTTGTTTCAATACAGCAACTAGTAAATCTCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041438.7 ENSMUST00000099931.11 |
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| 3UTR-3UTR CCA 90 bp | TGGGGCAGAATGCACCTGGCACTCCCTGTGCAGCAGACTGCAACCACATTTTCCTGGTCCTGGGGCTCTTaGTTCCATCCCCTTGTACAC | + |
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Preference number: 2 (lower is better) Translates to: WGRMHLALPVQQTATTFSWSWGS*FHPLVH Trigger: GTGTACAAGGGGATGGAACCAAGAGCCCCAGGACCA...GGAAAATGTGGTTGCAGTCTGCTGCACAGGGAGTGCCAGGTGCATTCTGCCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000041438.7 ENSMUST00000099931.11 |
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| 3UTR-3UTR CCA 90 bp | AGCACACAAGGTGTGGCGTGGGCTCAGGTGGTAGCAGCACTCAGCCAAATAGCCATCTACTGTTGGTCCTaGGGCTCTTGGTTCCATCCC | + |
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Preference number: 2 (lower is better) Translates to: STQGVAWAQVVAALSQIAIYCWS*GSWFHP Trigger: GGGATGGAACCAAGAGCCCCAGGACCAACAGTAGAT...GGCTATTTGGCTGAGTGCTGCTACCACCTGAGCCCACGCCACACCTTGTGTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041438.7 ENSMUST00000099931.11 |
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| 3UTR-3UTR GCA 90 bp | AAGTCAGGGTCCCGAGGTCAGCAGGGCATGGGGCAGAATGCACCTGGCACTCCCGTTCACAGCATCTCGTaGTGTCTGTCAAAAAGCAAA | + |
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Preference number: 2 (lower is better) Translates to: KSGSRGQQGMGQNAPGTPVHSIS*CLSKSK Trigger: TTTGCTTTTTGACAGACAGCACGAGATGCTGTGAAC...GGGAGTGCCAGGTGCATTCTGCCCCATGCCCTGCTGACCTCGGGACCCTGACTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041438.7 ENSMUST00000099931.11 |
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| 3UTR-3UTR CCA 90 bp | GTGGCGTGGGCTCAGGTGGTAGCAGCACTCAGCCAAATAGCCATGTGCTCATCCAAAAAGCAAACACTGTaGCCGGCAGCCTTTCTTCCC | + |
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Preference number: 2 (lower is better) Translates to: VAWAQVVAALSQIAMCSSKKQTL*PAAFLP Trigger: GGGAAGAAAGGCTGCCGGCCACAGTGTTTGCTTTTT...GGATGAGCACATGGCTATTTGGCTGAGTGCTGCTACCACCTGAGCCCACGCCAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041438.7 ENSMUST00000099931.11 |
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| 3UTR-3UTR CCA 90 bp | AAGTCAGGGTCCCGAGGTCAGCAGGGCATGGGGCAGAATGCACCTGGCACTCCCCAGAGCAATGGGATCTaGAGATTTACTAGTTGCTGT | + |
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Preference number: 2 (lower is better) Translates to: KSGSRGQQGMGQNAPGTPQSNGI*RFTSCC Trigger: ACAGCAACTAGTAAATCTCCAGATCCCATTGCTCTG...GGGAGTGCCAGGTGCATTCTGCCCCATGCCCTGCTGACCTCGGGACCCTGACTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041438.7 ENSMUST00000099931.11 |
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| 3UTR CAA 90 bp | CTGGCACTCCCTGTGCAGCAGACTGCAACCACATTTTCCACATTGTaGGCACCGGAACCAAAAATCCCGCACAAGACAGCTGTCCTCCAG | + |
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Preference number: 2 (lower is better) Translates to: LALPVQQTATTFSTL*APEPKIPHKTAVLQ Trigger: CTGGAGGACAGCTGTCTTGTGCGGGATTTTTGGTTCCGGTGCCAACAATGTGGAAAATGTGGTTGCAGTCTGCTGCACAGGGAGTGCCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041438.7 ENSMUST00000099931.11 |
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| 3UTR CAA 90 bp | CACCTGGCACTCCCTGTGCAGCAGACTGCAACCACATTTTCCACATaGTTGGCACCGGAACCAAAAATCCCGCACAAGACAGCTGTCCTC | + |
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Preference number: 2 (lower is better) Translates to: HLALPVQQTATTFST*LAPEPKIPHKTAVL Trigger: GAGGACAGCTGTCTTGTGCGGGATTTTTGGTTCCGGTGCCAACAATGTGGAAAATGTGGTTGCAGTCTGCTGCACAGGGAGTGCCAGGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041438.7 ENSMUST00000099931.11 |
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| 3UTR-3UTR CCA 90 bp | TCTCGTGCTGTCTGTCAAAAAGCAAACACTGTGGCCGGCAGCCTTTCTTCCCAGTGGTCCTGGGGCTCTTaGTTCCATCCCCTTGTACAC | + |
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Preference number: 2 (lower is better) Translates to: SRAVCQKANTVAGSLSSQWSWGS*FHPLVH Trigger: GTGTACAAGGGGATGGAACCAAGAGCCCCAGGACCA...CTGGGAAGAAAGGCTGCCGGCCACAGTGTTTGCTTTTTGACAGACAGCACGAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000041438.7 ENSMUST00000099931.11 |
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| 3UTR-3UTR GCA 90 bp | GTGGGCTCAGGTGGTAGCAGCACTCAGCCAAATAGCCATGTGCTCATCCCCGCAGTTCACAGCATCTCGTaGTGTCTGTCAAAAAGCAAA | + |
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Preference number: 2 (lower is better) Translates to: VGSGGSSTQPNSHVLIPAVHSIS*CLSKSK Trigger: TTTGCTTTTTGACAGACAGCACGAGATGCTGTGAAC...TGCGGGGATGAGCACATGGCTATTTGGCTGAGTGCTGCTACCACCTGAGCCCAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041438.7 ENSMUST00000099931.11 |
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| 3UTR-3UTR CCA 90 bp | AATCCCGCACAAGACAGCTGTCCTCCAGGCTCAGAGAATATTGGGAAACGCACAATCTACTGTTGGTCCTaGGGCTCTTGGTTCCATCCC | + |
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Preference number: 2 (lower is better) Translates to: NPAQDSCPPGSENIGKRTIYCWS*GSWFHP Trigger: GGGATGGAACCAAGAGCCCCAGGACCAACAGTAGAT...TGTGCGTTTCCCAATATTCTCTGAGCCTGGAGGACAGCTGTCTTGTGCGGGATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041438.7 ENSMUST00000099931.11 |
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| 3UTR-3UTR CCA 90 bp | CCGGCAGCCTTTCTTCCCAGCTCTAACACCAAAGCTGCCGAGTGCTCACTGCTACTTTTTATCTACTGTTaGTCCTGGGGCTCTTGGTTC | + |
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Preference number: 2 (lower is better) Translates to: PAAFLPSSNTKAAECSLLLFIYC*SWGSWF Trigger: GAACCAAGAGCCCCAGGACCAACAGTAGATAAAAAG...TAGCAGTGAGCACTCGGCAGCTTTGGTGTTAGAGCTGGGAAGAAAGGCTGCCGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041438.7 ENSMUST00000099931.11 |
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| 3UTR CAA 90 bp | TGTCACATCAGAGCAATGGGATCTGGAGATTTACTAGTTGCTGTATaGAAACAAGTTCACAGCATCTCGTGCTGTCTGTCAAAAAGCAAA | + |
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Preference number: 2 (lower is better) Translates to: CHIRAMGSGDLLVAV*KQVHSISCCLSKSK Trigger: TTTGCTTTTTGACAGACAGCACGAGATGCTGTGAACTTGTTTCAATACAGCAACTAGTAAATCTCCAGATCCCATTGCTCTGATGTGACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041438.7 ENSMUST00000099931.11 |
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| 3UTR GCA 72 bp | GCTCAGGTGGTAGCAGCACTCAGCCAAATAGCCATGTaGTCATCCCCGCACAGCAGCACCGAGCGCCACTCA | + |
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Preference number: 3 (lower is better) Translates to: AQVVAALSQIAM*SSPHSSTERHS Trigger: TGAGTGGCGCTCGGTGCTGCTGTGCGGGGATGAGCACATGGCTATTTGGCTGAGTGCTGCTACCACCTGAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041438.7 ENSMUST00000099931.11 |
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| 3UTR GCA 72 bp | GGGCAGAATGCACCTGGCACTCCCTGTGCAGCAGACTaGAACCACATTTTCCACATTGTTGGCACCGGAACC | + |
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Preference number: 3 (lower is better) Translates to: GQNAPGTPCAAD*NHIFHIVGTGT Trigger: GGTTCCGGTGCCAACAATGTGGAAAATGTGGTTGCAGTCTGCTGCACAGGGAGTGCCAGGTGCATTCTGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041438.7 ENSMUST00000099931.11 |
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| 3UTR-3UTR CAA 90 bp | GCATGGGGCAGAATGCACCTGGCACTCCCTGTGCAGCAGACTGCAACCACATTTCTCTGTCTTGTCACCTaGTCACATCAGAGCAATGGG | + |
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Preference number: 3 (lower is better) Translates to: AWGRMHLALPVQQTATTFLCLVT*SHQSNG Trigger: CCCATTGCTCTGATGTGACAAGGTGACAAGACAGAG...AAATGTGGTTGCAGTCTGCTGCACAGGGAGTGCCAGGTGCATTCTGCCCCATGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041438.7 ENSMUST00000099931.11 |
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| 3UTR-3UTR CAA 90 bp | AAGTCAGGGTCCCGAGGTCAGCAGGGCATGGGGCAGAATGCACCTGGCACTCCCGTGGCACATGGATTTTaGAATGCTTTTTATCTACTG | + |
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Preference number: 3 (lower is better) Translates to: KSGSRGQQGMGQNAPGTPVAHGF*NAFYLL Trigger: CAGTAGATAAAAAGCATTCAAAAATCCATGTGCCAC...GGGAGTGCCAGGTGCATTCTGCCCCATGCCCTGCTGACCTCGGGACCCTGACTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000041438.7 ENSMUST00000099931.11 |
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| 3UTR-3UTR CAA 90 bp | AATCCCGCACAAGACAGCTGTCCTCCAGGCTCAGAGAATATTGGGAAACGCACACTCTGTCTTGTCACCTaGTCACATCAGAGCAATGGG | + |
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Preference number: 3 (lower is better) Translates to: NPAQDSCPPGSENIGKRTLCLVT*SHQSNG Trigger: CCCATTGCTCTGATGTGACAAGGTGACAAGACAGAG...TGTGCGTTTCCCAATATTCTCTGAGCCTGGAGGACAGCTGTCTTGTGCGGGATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041438.7 ENSMUST00000099931.11 |
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| 3UTR CCA 72 bp | CAGCATCTCGTGCTGTCTGTCAAAAAGCAAACACTGTaGCCGGCAGCCTTTCTTCCCAGCTCTAACACCAAA | + |
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Preference number: 3 (lower is better) Translates to: QHLVLSVKKQTL*PAAFLPSSNTK Trigger: TTTGGTGTTAGAGCTGGGAAGAAAGGCTGCCGGCCACAGTGTTTGCTTTTTGACAGACAGCACGAGATGCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041438.7 ENSMUST00000099931.11 |
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| 3UTR CCA 72 bp | CTGTGCAGCAGACTGCAACCACATTTTCCACATTGTTaGCACCGGAACCAAAAATCCCGCACAAGACAGCTG | + |
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Preference number: 3 (lower is better) Translates to: LCSRLQPHFPHC*HRNQKSRTRQL Trigger: CAGCTGTCTTGTGCGGGATTTTTGGTTCCGGTGCCAACAATGTGGAAAATGTGGTTGCAGTCTGCTGCACAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041438.7 ENSMUST00000099931.11 |
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| 3UTR-3UTR CAA 90 bp | GGGGCAGAATGCACCTGGCACTCCCTGTGCAGCAGACTGCAACCACATTTTCCAGTGGCACATGGATTTTaGAATGCTTTTTATCTACTG | + |
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Preference number: 3 (lower is better) Translates to: GAECTWHSLCSRLQPHFPVAHGF*NAFYLL Trigger: CAGTAGATAAAAAGCATTCAAAAATCCATGTGCCAC...TGGAAAATGTGGTTGCAGTCTGCTGCACAGGGAGTGCCAGGTGCATTCTGCCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000041438.7 ENSMUST00000099931.11 |
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| 3UTR GCA 72 bp | TCACATCAGAGCAATGGGATCTGGAGATTTACTAGTTaGTGTATTGAAACAAGTTCACAGCATCTCGTGCTG | + |
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Preference number: 3 (lower is better) Translates to: SHQSNGIWRFTS*CIETSSQHLVL Trigger: CAGCACGAGATGCTGTGAACTTGTTTCAATACAGCAACTAGTAAATCTCCAGATCCCATTGCTCTGATGTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041438.7 ENSMUST00000099931.11 |
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| 3UTR CCA 72 bp | TGTCTTGTCACCTTGTCACATCAGAGCAATGGGATCTaGAGATTTACTAGTTGCTGTATTGAAACAAGTTCA | + |
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Preference number: 3 (lower is better) Translates to: CLVTLSHQSNGI*RFTSCCIETSS Trigger: TGAACTTGTTTCAATACAGCAACTAGTAAATCTCCAGATCCCATTGCTCTGATGTGACAAGGTGACAAGACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041438.7 ENSMUST00000099931.11 |
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| CDS-3UTR TCA 90 bp | AAGTCAGGGTCCCGAGGTCAGCAGGGCATGGGGCAGAATGCACCTGGCACTCCCGAGAGTGGTAGTGTGTaGGCAGAACCACGGCATGGA | + |
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Preference number: 4 (lower is better) Translates to: KSGSRGQQGMGQNAPGTPESGSV*AEPRHG Trigger: TCCATGCCGTGGTTCTGCTCACACACTACCACTCTC...GGGAGTGCCAGGTGCATTCTGCCCCATGCCCTGCTGACCTCGGGACCCTGACTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041438.7 ENSMUST00000099931.11 |
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| CDS-3UTR CCA 90 bp | ACCTGGCACTCCCTGTGCAGCAGACTGCAACCACATTTTCCACATTGTTGGCACCCAAGTTCCTCGTCCTaGCCGCGGTCCCCGCCGCAC | + |
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Preference number: 4 (lower is better) Translates to: TWHSLCSRLQPHFPHCWHPSSSS*PRSPPH Trigger: GTGCGGCGGGGACCGCGGCCAGGACGAGGAACTTGG...GTGCCAACAATGTGGAAAATGTGGTTGCAGTCTGCTGCACAGGGAGTGCCAGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041438.7 |
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| CDS-3UTR TCA 90 bp | AAGTCAGGGTCCCGAGGTCAGCAGGGCATGGGGCAGAATGCACCTGGCACTCCCGGGTCCCCACCAACATaGAGAAAGTCACTGACATGC | + |
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Preference number: 4 (lower is better) Translates to: KSGSRGQQGMGQNAPGTPGSPPT*RKSLTC Trigger: GCATGTCAGTGACTTTCTTCATGTTGGTGGGGACCC...GGGAGTGCCAGGTGCATTCTGCCCCATGCCCTGCTGACCTCGGGACCCTGACTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041438.7 ENSMUST00000099931.11 |
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| CDS-3UTR CCA 90 bp | ACCTGGCACTCCCTGTGCAGCAGACTGCAACCACATTTTCCACATTGTTGGCACTCCCCGCCGCACTGGTaGCAGCTCAGCAGCTCGGAG | + |
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Preference number: 4 (lower is better) Translates to: TWHSLCSRLQPHFPHCWHSPPHW*QLSSSE Trigger: CTCCGAGCTGCTGAGCTGCCACCAGTGCGGCGGGGA...GTGCCAACAATGTGGAAAATGTGGTTGCAGTCTGCTGCACAGGGAGTGCCAGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041438.7 |
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| CDS-3UTR TCA 90 bp | AAAGTCAGGGTCCCGAGGTCAGCAGGGCATGGGGCAGAATGCACCTGGCACTCCCCTTCTCAGAGTGCTTaGACTGCCTCCAGAAGCTGT | + |
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Preference number: 4 (lower is better) Translates to: KVRVPRSAGHGAECTWHSPSQSA*TASRSC Trigger: ACAGCTTCTGGAGGCAGTTCAAGCACTCTGAGAAGG...GGAGTGCCAGGTGCATTCTGCCCCATGCCCTGCTGACCTCGGGACCCTGACTTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041438.7 ENSMUST00000099931.11 |
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| CDS-3UTR CCA 90 bp | CCCAGTCTTTACGCACTCTGTCTTGTCACCTTGTCACATCAGAGCAATGGGATCCGGTCCCCGCCGCACTaGTGGCAGCTCAGCAGCTCG | + |
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Preference number: 4 (lower is better) Translates to: PSLYALCLVTLSHQSNGIRSPPH*WQLSSS Trigger: CGAGCTGCTGAGCTGCCACCAGTGCGGCGGGGACCG...GATCCCATTGCTCTGATGTGACAAGGTGACAAGACAGAGTGCGTAAAGACTGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041438.7 |
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| CDS-3UTR TCA 90 bp | AAAGTCAGGGTCCCGAGGTCAGCAGGGCATGGGGCAGAATGCACCTGGCACTCCTTCCACAGCCAAATGTaGAGGAGGCAAGAGAGTGGT | + |
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Preference number: 4 (lower is better) Translates to: KVRVPRSAGHGAECTWHSFHSQM*RRQESG Trigger: ACCACTCTCTTGCCTCCTTCACATTTGGCTGTGGAA...GGAGTGCCAGGTGCATTCTGCCCCATGCCCTGCTGACCTCGGGACCCTGACTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041438.7 ENSMUST00000099931.11 |
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| CDS-3UTR TCA 90 bp | AAGTCAGGGTCCCGAGGTCAGCAGGGCATGGGGCAGAATGCACCTGGCACTCCCTGGCCACCATCGCAATaGATCTCTGGACTAATTCCA | + |
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Preference number: 4 (lower is better) Translates to: KSGSRGQQGMGQNAPGTPWPPSQ*ISGLIP Trigger: TGGAATTAGTCCAGAGATTCATTGCGATGGTGGCCA...GGGAGTGCCAGGTGCATTCTGCCCCATGCCCTGCTGACCTCGGGACCCTGACTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041438.7 ENSMUST00000099931.11 |
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| CDS-3UTR TCA 90 bp | AGCACACAAGGTGTGGCGTGGGCTCAGGTGGTAGCAGCACTCAGCCAAATAGCCGGGTCCCCACCAACATaGAGAAAGTCACTGACATGC | + |
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Preference number: 4 (lower is better) Translates to: STQGVAWAQVVAALSQIAGSPPT*RKSLTC Trigger: GCATGTCAGTGACTTTCTTCATGTTGGTGGGGACCC...GGCTATTTGGCTGAGTGCTGCTACCACCTGAGCCCACGCCACACCTTGTGTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041438.7 ENSMUST00000099931.11 |
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| CDS-3UTR CCA 90 bp | GTGGCGTGGGCTCAGGTGGTAGCAGCACTCAGCCAAATAGCCATGTGCTCATCCCAGCATCTCCTTCTCTaGGATGAACCTGCTTGGTCC | + |
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Preference number: 4 (lower is better) Translates to: VAWAQVVAALSQIAMCSSQHLLL*DEPAWS Trigger: GGACCAAGCAGGTTCATCCCAGAGAAGGAGATGCTG...GGATGAGCACATGGCTATTTGGCTGAGTGCTGCTACCACCTGAGCCCACGCCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041438.7 ENSMUST00000099931.11 |
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| CDS-3UTR GCA 90 bp | ACCTGGCACTCCCTGTGCAGCAGACTGCAACCACATTTTCCACATTGTTGGCACTCTTCACTGCCCACCTaGAGCATCTCCTTCTCTGGG | + |
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Preference number: 4 (lower is better) Translates to: TWHSLCSRLQPHFPHCWHSSLPT*SISFSG Trigger: CCCAGAGAAGGAGATGCTGCAGGTGGGCAGTGAAGA...GTGCCAACAATGTGGAAAATGTGGTTGCAGTCTGCTGCACAGGGAGTGCCAGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041438.7 ENSMUST00000099931.11 |
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| CDS-3UTR GCA 90 bp | AAAGTCAGGGTCCCGAGGTCAGCAGGGCATGGGGCAGAATGCACCTGGCACTCCAGCATACAGGAGTTCTaGTTGCATCCTAGCTTCTAT | + |
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Preference number: 4 (lower is better) Translates to: KVRVPRSAGHGAECTWHSSIQEF*LHPSFY Trigger: ATAGAAGCTAGGATGCAAGCAGAACTCCTGTATGCT...GGAGTGCCAGGTGCATTCTGCCCCATGCCCTGCTGACCTCGGGACCCTGACTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041438.7 ENSMUST00000099931.11 |
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| CDS-3UTR CCA 90 bp | AAAGTCAGGGTCCCGAGGTCAGCAGGGCATGGGGCAGAATGCACCTGGCACTCCATCAGCCAAGGCCTATaGGCTAACACTTTGTTAAGT | + |
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Preference number: 4 (lower is better) Translates to: KVRVPRSAGHGAECTWHSISQGL*ANTLLS Trigger: ACTTAACAAAGTGTTAGCCCATAGGCCTTGGCTGAT...GGAGTGCCAGGTGCATTCTGCCCCATGCCCTGCTGACCTCGGGACCCTGACTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041438.7 ENSMUST00000099931.11 |
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| CDS-3UTR CCA 90 bp | CCGGCAGCCTTTCTTCCCAGCTCTAACACCAAAGCTGCCGAGTGCTCACTGCTACATGCATCCCGTGTCTaGAGAAATCCTTGTAGCCGT | + |
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Preference number: 4 (lower is better) Translates to: PAAFLPSSNTKAAECSLLHASRV*RNPCSR Trigger: ACGGCTACAAGGATTTCTCCAGACACGGGATGCATG...TAGCAGTGAGCACTCGGCAGCTTTGGTGTTAGAGCTGGGAAGAAAGGCTGCCGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041438.7 ENSMUST00000099931.11 |
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| CDS-3UTR CCA 90 bp | GCATGGGGCAGAATGCACCTGGCACTCCCTGTGCAGCAGACTGCAACCACATTTCATGCATCCCGTGTCTaGAGAAATCCTTGTAGCCGT | + |
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Preference number: 4 (lower is better) Translates to: AWGRMHLALPVQQTATTFHASRV*RNPCSR Trigger: ACGGCTACAAGGATTTCTCCAGACACGGGATGCATG...AAATGTGGTTGCAGTCTGCTGCACAGGGAGTGCCAGGTGCATTCTGCCCCATGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041438.7 ENSMUST00000099931.11 |
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| CDS-3UTR TCA 90 bp | CTGTCAAAAAGCAAACACTGTGGCCGGCAGCCTTTCTTCCCAGCTCTAACACCATCTCCTTCTCTGGGATaGACCTGCTTGGTCCGTGTC | + |
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Preference number: 4 (lower is better) Translates to: LSKSKHCGRQPFFPALTPSPSLG*TCLVRV Trigger: GACACGGACCAAGCAGGTTCATCCCAGAGAAGGAGA...TGGTGTTAGAGCTGGGAAGAAAGGCTGCCGGCCACAGTGTTTGCTTTTTGACAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041438.7 ENSMUST00000099931.11 |
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| CDS-3UTR TCA 90 bp | AATCCCGCACAAGACAGCTGTCCTCCAGGCTCAGAGAATATTGGGAAACGCACATCTCCTTCTCTGGGATaGACCTGCTTGGTCCGTGTC | + |
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Preference number: 4 (lower is better) Translates to: NPAQDSCPPGSENIGKRTSPSLG*TCLVRV Trigger: GACACGGACCAAGCAGGTTCATCCCAGAGAAGGAGA...TGTGCGTTTCCCAATATTCTCTGAGCCTGGAGGACAGCTGTCTTGTGCGGGATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041438.7 ENSMUST00000099931.11 |
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| CDS-3UTR TCA 90 bp | GTGGGCTCAGGTGGTAGCAGCACTCAGCCAAATAGCCATGTGCTCATCCCCGCACATGAAGAAAGTCACTaGCATGCAGATTCACCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: VGSGGSSTQPNSHVLIPAHEESH*HADSPG Trigger: ACCTGGTGAATCTGCATGTCAGTGACTTTCTTCATG...TGCGGGGATGAGCACATGGCTATTTGGCTGAGTGCTGCTACCACCTGAGCCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041438.7 ENSMUST00000099931.11 |
||
| CDS-3UTR TCA 90 bp | AGCTGCCGAGTGCTCACTGCTAGACAGGCAGTGAGATCCCACAGTAAAATAGCAGAGAGTGGTAGTGTGTaGGCAGAACCACGGCATGGA | + |
|
Preference number: 4 (lower is better) Translates to: SCRVLTARQAVRSHSKIAESGSV*AEPRHG Trigger: TCCATGCCGTGGTTCTGCTCACACACTACCACTCTC...TGCTATTTTACTGTGGGATCTCACTGCCTGTCTAGCAGTGAGCACTCGGCAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041438.7 ENSMUST00000099931.11 |
||
| CDS-3UTR TCA 90 bp | ACCTGGCACTCCCTGTGCAGCAGACTGCAACCACATTTTCCACATTGTTGGCACCCTTCTCAGAGTGCTTaGACTGCCTCCAGAAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: TWHSLCSRLQPHFPHCWHPSQSA*TASRSC Trigger: ACAGCTTCTGGAGGCAGTTCAAGCACTCTGAGAAGG...GTGCCAACAATGTGGAAAATGTGGTTGCAGTCTGCTGCACAGGGAGTGCCAGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041438.7 ENSMUST00000099931.11 |
||
| CDS-3UTR GCA 90 bp | ATCTCGTGCTGTCTGTCAAAAAGCAAACACTGTGGCCGGCAGCCTTTCTTCCCATCTTCACTGCCCACCTaGAGCATCTCCTTCTCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: ISCCLSKSKHCGRQPFFPSSLPT*SISFSG Trigger: CCCAGAGAAGGAGATGCTGCAGGTGGGCAGTGAAGA...TGGGAAGAAAGGCTGCCGGCCACAGTGTTTGCTTTTTGACAGACAGCACGAGAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041438.7 ENSMUST00000099931.11 |
||
| CDS-3UTR GCA 90 bp | GTGGCGTGGGCTCAGGTGGTAGCAGCACTCAGCCAAATAGCCATGTGCTCATCCCCGAGACACATCTCTTaGTGGTGTAACTTCATCATC | + |
|
Preference number: 4 (lower is better) Translates to: VAWAQVVAALSQIAMCSSPRHIS*WCNFII Trigger: GATGATGAAGTTACACCAGCAAGAGATGTGTCTCGG...GGATGAGCACATGGCTATTTGGCTGAGTGCTGCTACCACCTGAGCCCACGCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041438.7 ENSMUST00000099931.11 |
||
| CDS-3UTR GCA 90 bp | GGGGCAGAATGCACCTGGCACTCCCTGTGCAGCAGACTGCAACCACATTTTCCATCAGAGTGCTTGAACTaGCTCCAGAAGCTGTCATAC | + |
|
Preference number: 4 (lower is better) Translates to: GAECTWHSLCSRLQPHFPSECLN*LQKLSY Trigger: GTATGACAGCTTCTGGAGGCAGTTCAAGCACTCTGA...TGGAAAATGTGGTTGCAGTCTGCTGCACAGGGAGTGCCAGGTGCATTCTGCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041438.7 ENSMUST00000099931.11 |
||
| CDS-3UTR CCA 90 bp | TCCACATTGTTGGCACCGGAACCAAAAATCCCGCACAAGACAGCTGTCCTCCAGCAGCATCTCCTTCTCTaGGATGAACCTGCTTGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: STLLAPEPKIPHKTAVLQQHLLL*DEPAWS Trigger: GGACCAAGCAGGTTCATCCCAGAGAAGGAGATGCTG...CTGGAGGACAGCTGTCTTGTGCGGGATTTTTGGTTCCGGTGCCAACAATGTGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041438.7 ENSMUST00000099931.11 |
||
| CDS-3UTR CCA 90 bp | TCTCGTGCTGTCTGTCAAAAAGCAAACACTGTGGCCGGCAGCCTTTCTTCCCAGCTGGACACGAAACGTTaGGACATGCATCCCGTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: SRAVCQKANTVAGSLSSQLDTKR*DMHPVS Trigger: AGACACGGGATGCATGTCCCAACGTTTCGTGTCCAG...CTGGGAAGAAAGGCTGCCGGCCACAGTGTTTGCTTTTTGACAGACAGCACGAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041438.7 ENSMUST00000099931.11 |
||
| CDS-3UTR CCA 90 bp | AATCCCGCACAAGACAGCTGTCCTCCAGGCTCAGAGAATATTGGGAAACGCACACTGGACACGAAACGTTaGGACATGCATCCCGTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: NPAQDSCPPGSENIGKRTLDTKR*DMHPVS Trigger: AGACACGGGATGCATGTCCCAACGTTTCGTGTCCAG...TGTGCGTTTCCCAATATTCTCTGAGCCTGGAGGACAGCTGTCTTGTGCGGGATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041438.7 ENSMUST00000099931.11 |
||
| CDS-3UTR GCA 90 bp | CCGGCAGCCTTTCTTCCCAGCTCTAACACCAAAGCTGCCGAGTGCTCACTGCTAAGCATACAGGAGTTCTaGTTGCATCCTAGCTTCTAT | + |
|
Preference number: 4 (lower is better) Translates to: PAAFLPSSNTKAAECSLLSIQEF*LHPSFY Trigger: ATAGAAGCTAGGATGCAAGCAGAACTCCTGTATGCT...TAGCAGTGAGCACTCGGCAGCTTTGGTGTTAGAGCTGGGAAGAAAGGCTGCCGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041438.7 ENSMUST00000099931.11 |
||
| CDS-3UTR CCA 90 bp | GTGGGCTCAGGTGGTAGCAGCACTCAGCCAAATAGCCATGTGCTCATCCCCGCAATCGCAATGAATCTCTaGACTAATTCCACAGCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: VGSGGSSTQPNSHVLIPAIAMNL*TNSTAK Trigger: TTTGGCTGTGGAATTAGTCCAGAGATTCATTGCGAT...TGCGGGGATGAGCACATGGCTATTTGGCTGAGTGCTGCTACCACCTGAGCCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041438.7 ENSMUST00000099931.11 |
||
| 3UTR CAA 72 bp | CCTGTGCAGCAGACTGCAACCACATTTTCCACATTGTaGGCACCGGAACCAAAAATCCCGCACAAGACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: PVQQTATTFSTL*APEPKIPHKTA Trigger: AGCTGTCTTGTGCGGGATTTTTGGTTCCGGTGCCAACAATGTGGAAAATGTGGTTGCAGTCTGCTGCACAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041438.7 ENSMUST00000099931.11 |
||
| CDS-3UTR TCA 90 bp | AGCTGCCGAGTGCTCACTGCTAGACAGGCAGTGAGATCCCACAGTAAAATAGCAGCCTCATCTTTTCCATaGGAGCTTCCACCTCAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: SCRVLTARQAVRSHSKIAASSFP*ELPPQR Trigger: TCTTTGAGGTGGAAGCTCTCATGGAAAAGATGAGGC...TGCTATTTTACTGTGGGATCTCACTGCCTGTCTAGCAGTGAGCACTCGGCAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041438.7 ENSMUST00000099931.11 |
||
| CDS-3UTR GCA 90 bp | GCATGGGGCAGAATGCACCTGGCACTCCCTGTGCAGCAGACTGCAACCACATTTTACAGGAGTTCTGCTTaGATCCTAGCTTCTATAAGA | + |
|
Preference number: 4 (lower is better) Translates to: AWGRMHLALPVQQTATTFYRSSA*ILASIR Trigger: TCTTATAGAAGCTAGGATGCAAGCAGAACTCCTGTA...AAATGTGGTTGCAGTCTGCTGCACAGGGAGTGCCAGGTGCATTCTGCCCCATGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041438.7 ENSMUST00000099931.11 |
||
| CDS-3UTR TCA 90 bp | CCCAGTCTTTACGCACTCTGTCTTGTCACCTTGTCACATCAGAGCAATGGGATCTGGCCACCATCGCAATaGATCTCTGGACTAATTCCA | + |
|
Preference number: 4 (lower is better) Translates to: PSLYALCLVTLSHQSNGIWPPSQ*ISGLIP Trigger: TGGAATTAGTCCAGAGATTCATTGCGATGGTGGCCA...GATCCCATTGCTCTGATGTGACAAGGTGACAAGACAGAGTGCGTAAAGACTGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041438.7 ENSMUST00000099931.11 |
||
| CDS-3UTR TCA 90 bp | AAAAATCCCGCACAAGACAGCTGTCCTCCAGGCTCAGAGAATATTGGGAAACGCAGCCCGTCTGAGCATTaGGGTATCAACATCTTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: KNPAQDSCPPGSENIGKRSPSEH*GINIFV Trigger: CACAAAGATGTTGATACCTCAATGCTCAGACGGGCT...GCGTTTCCCAATATTCTCTGAGCCTGGAGGACAGCTGTCTTGTGCGGGATTTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041438.7 ENSMUST00000099931.11 |
||
| CDS-3UTR TCA 90 bp | CCCAGTCTTTACGCACTCTGTCTTGTCACCTTGTCACATCAGAGCAATGGGATCAGCCCGTCTGAGCATTaGGGTATCAACATCTTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: PSLYALCLVTLSHQSNGISPSEH*GINIFV Trigger: CACAAAGATGTTGATACCTCAATGCTCAGACGGGCT...GATCCCATTGCTCTGATGTGACAAGGTGACAAGACAGAGTGCGTAAAGACTGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041438.7 ENSMUST00000099931.11 |
||
| CDS-3UTR GCA 90 bp | AGCTGCCGAGTGCTCACTGCTAGACAGGCAGTGAGATCCCACAGTAAAATAGCATCTGCAAATAACGCATaGATCTGTGCGTCTTCACTG | + |
|
Preference number: 4 (lower is better) Translates to: SCRVLTARQAVRSHSKIASANNA*ICASSL Trigger: CAGTGAAGACGCACAGATGCATGCGTTATTTGCAGA...TGCTATTTTACTGTGGGATCTCACTGCCTGTCTAGCAGTGAGCACTCGGCAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041438.7 ENSMUST00000099931.11 |
||
| 3UTR CAA 72 bp | CCGCACAAGACAGCTGTCCTCCAGGCTCAGAGAATATaGGGAAACGCACATCAAAAGATAGCCTGTTTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: PHKTAVLQAQRI*GNAHQKIACFP Trigger: AGGAAAACAGGCTATCTTTTGATGTGCGTTTCCCAATATTCTCTGAGCCTGGAGGACAGCTGTCTTGTGCGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041438.7 ENSMUST00000099931.11 |
||
| CDS-3UTR TCA 90 bp | AATCCCGCACAAGACAGCTGTCCTCCAGGCTCAGAGAATATTGGGAAACGCACAAAACCATCACTAATGTaGTGTTATCCAGACGACCCA | + |
|
Preference number: 4 (lower is better) Translates to: NPAQDSCPPGSENIGKRTKPSLM*CYPDDP Trigger: TGGGTCGTCTGGATAACATCACATTAGTGATGGTTT...TGTGCGTTTCCCAATATTCTCTGAGCCTGGAGGACAGCTGTCTTGTGCGGGATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041438.7 ENSMUST00000099931.11 |
||
| CDS-3UTR TCA 90 bp | TTTACGCACTCTGTCTTGTCACCTTGTCACATCAGAGCAATGGGATCTGGAGATTTCCACAGCCAAATGTaGAGGAGGCAAGAGAGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: FTHSVLSPCHIRAMGSGDFHSQM*RRQESG Trigger: ACCACTCTCTTGCCTCCTTCACATTTGGCTGTGGAA...ATCTCCAGATCCCATTGCTCTGATGTGACAAGGTGACAAGACAGAGTGCGTAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041438.7 ENSMUST00000099931.11 |
||
| CDS-3UTR TCA 90 bp | ACAGCTGTCCTCCAGGCTCAGAGAATATTGGGAAACGCACATCAAAAGATAGCCGCCTCATCTTTTCCATaGGAGCTTCCACCTCAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: TAVLQAQRILGNAHQKIAASSFP*ELPPQR Trigger: TCTTTGAGGTGGAAGCTCTCATGGAAAAGATGAGGC...GGCTATCTTTTGATGTGCGTTTCCCAATATTCTCTGAGCCTGGAGGACAGCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041438.7 ENSMUST00000099931.11 |
||
| CDS-3UTR TCA 90 bp | CCCAGTCTTTACGCACTCTGTCTTGTCACCTTGTCACATCAGAGCAATGGGATCAAACCATCACTAATGTaGTGTTATCCAGACGACCCA | + |
|
Preference number: 4 (lower is better) Translates to: PSLYALCLVTLSHQSNGIKPSLM*CYPDDP Trigger: TGGGTCGTCTGGATAACATCACATTAGTGATGGTTT...GATCCCATTGCTCTGATGTGACAAGGTGACAAGACAGAGTGCGTAAAGACTGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041438.7 ENSMUST00000099931.11 |
||
| CDS-3UTR TCA 90 bp | AATCCCGCACAAGACAGCTGTCCTCCAGGCTCAGAGAATATTGGGAAACGCACAATCTCATCCACACTGTaGTTGCCATTTGTAATGTCA | + |
|
Preference number: 4 (lower is better) Translates to: NPAQDSCPPGSENIGKRTISSTL*LPFVMS Trigger: TGACATTACAAATGGCAATCACAGTGTGGATGAGAT...TGTGCGTTTCCCAATATTCTCTGAGCCTGGAGGACAGCTGTCTTGTGCGGGATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041438.7 ENSMUST00000099931.11 |
||
| CDS-3UTR TCA 90 bp | CAGCATCTCGTGCTGTCTGTCAAAAAGCAAACACTGTGGCCGGCAGCCTTTCTTGAGAGCATAAGCAGATaGGCAAGAAGTTTATTCATC | + |
|
Preference number: 4 (lower is better) Translates to: QHLVLSVKKQTLWPAAFLESISR*ARSLFI Trigger: GATGAATAAACTTCTTGCTCATCTGCTTATGCTCTC...AAGAAAGGCTGCCGGCCACAGTGTTTGCTTTTTGACAGACAGCACGAGATGCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099931.11 |
||
| CDS-3UTR GCA 90 bp | AAACAAGTTCACAGCATCTCGTGCTGTCTGTCAAAAAGCAAACACTGTGGCCGGTCTGCAAATAACGCATaGATCTGTGCGTCTTCACTG | + |
|
Preference number: 4 (lower is better) Translates to: KQVHSISCCLSKSKHCGRSANNA*ICASSL Trigger: CAGTGAAGACGCACAGATGCATGCGTTATTTGCAGA...CCGGCCACAGTGTTTGCTTTTTGACAGACAGCACGAGATGCTGTGAACTTGTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041438.7 ENSMUST00000099931.11 |
||
| CDS-3UTR GCA 90 bp | TTTACGCACTCTGTCTTGTCACCTTGTCACATCAGAGCAATGGGATCTGGAGATTCAGAGTGCTTGAACTaGCTCCAGAAGCTGTCATAC | + |
|
Preference number: 4 (lower is better) Translates to: FTHSVLSPCHIRAMGSGDSECLN*LQKLSY Trigger: GTATGACAGCTTCTGGAGGCAGTTCAAGCACTCTGA...ATCTCCAGATCCCATTGCTCTGATGTGACAAGGTGACAAGACAGAGTGCGTAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041438.7 ENSMUST00000099931.11 |
||
| CDS-3UTR GCA 90 bp | AAAAATCCCGCACAAGACAGCTGTCCTCCAGGCTCAGAGAATATTGGGAAACGCCCTAATGTTTTCCAGTaGTGTCTCTCTAGTAGTCGT | + |
|
Preference number: 4 (lower is better) Translates to: KNPAQDSCPPGSENIGKRPNVFQ*CLSSSR Trigger: ACGACTACTAGAGAGACAGCACTGGAAAACATTAGG...GCGTTTCCCAATATTCTCTGAGCCTGGAGGACAGCTGTCTTGTGCGGGATTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099931.11 |
||
| CDS-3UTR CCA 90 bp | CTGTCAAAAAGCAAACACTGTGGCCGGCAGCCTTTCTTCCCAGCTCTAACACCAATCGCAATGAATCTCTaGACTAATTCCACAGCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: LSKSKHCGRQPFFPALTPIAMNL*TNSTAK Trigger: TTTGGCTGTGGAATTAGTCCAGAGATTCATTGCGAT...TGGTGTTAGAGCTGGGAAGAAAGGCTGCCGGCCACAGTGTTTGCTTTTTGACAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041438.7 ENSMUST00000099931.11 |
||
| CDS-3UTR GCA 90 bp | CAGCATCTCGTGCTGTCTGTCAAAAAGCAAACACTGTGGCCGGCAGCCTTTCTTATCGTATTCCAAACATaGAGTGGATATAGTTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: QHLVLSVKKQTLWPAAFLIVFQT*SGYSSR Trigger: TCTGGAACTATATCCACTGCATGTTTGGAATACGAT...AAGAAAGGCTGCCGGCCACAGTGTTTGCTTTTTGACAGACAGCACGAGATGCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041438.7 ENSMUST00000099931.11 |
||
| CDS-3UTR GCA 90 bp | CCCAGTCTTTACGCACTCTGTCTTGTCACCTTGTCACATCAGAGCAATGGGATCTACAGGAGTTCTGCTTaGATCCTAGCTTCTATAAGA | + |
|
Preference number: 4 (lower is better) Translates to: PSLYALCLVTLSHQSNGIYRSSA*ILASIR Trigger: TCTTATAGAAGCTAGGATGCAAGCAGAACTCCTGTA...GATCCCATTGCTCTGATGTGACAAGGTGACAAGACAGAGTGCGTAAAGACTGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041438.7 ENSMUST00000099931.11 |
||
| CDS-3UTR GCA 90 bp | GCAGCAGACTGCAACCACATTTTCCACATTGTTGGCACCGGAACCAAAAATCCCATCGTATTCCAAACATaGAGTGGATATAGTTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: AADCNHIFHIVGTGTKNPIVFQT*SGYSSR Trigger: TCTGGAACTATATCCACTGCATGTTTGGAATACGAT...GGGATTTTTGGTTCCGGTGCCAACAATGTGGAAAATGTGGTTGCAGTCTGCTGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041438.7 ENSMUST00000099931.11 |
||
| 3UTR CAA 72 bp | AGAGCAATGGGATCTGGAGATTTACTAGTTGCTGTATaGAAACAAGTTCACAGCATCTCGTGCTGTCTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: RAMGSGDLLVAV*KQVHSISCCLS Trigger: TGACAGACAGCACGAGATGCTGTGAACTTGTTTCAATACAGCAACTAGTAAATCTCCAGATCCCATTGCTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041438.7 ENSMUST00000099931.11 |
||
| CDS-3UTR CCA 90 bp | TTGGTTCCATCCCCTTGTACACTAAATGTGCTGTTCATTCCAGGGTCATCTTTAATCAGCCAAGGCCTATaGGCTAACACTTTGTTAAGT | + |
|
Preference number: 4 (lower is better) Translates to: LVPSPCTLNVLFIPGSSLISQGL*ANTLLS Trigger: ACTTAACAAAGTGTTAGCCCATAGGCCTTGGCTGAT...TAAAGATGACCCTGGAATGAACAGCACATTTAGTGTACAAGGGGATGGAACCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041438.7 ENSMUST00000099931.11 |
||
| CDS CCA 90 bp | CTGATTCCAAGTTCCTCGTCCTGGCCGCGGTCCCCGCCGCACTGGTaGCAGCTCAGCAGCTCGGAGACAGCCAGCGAGGCTGCGTACGCC | + |
|
Preference number: 5 (lower is better) Translates to: LIPSSSSWPRSPPHW*QLSSSETASEAAYA Trigger: GGCGTACGCAGCCTCGCTGGCTGTCTCCGAGCTGCTGAGCTGCCACCAGTGCGGCGGGGACCGCGGCCAGGACGAGGAACTTGGAATCAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041438.7 |
||
| CDS CCA 90 bp | ATTCTGATTCCAAGTTCCTCGTCCTGGCCGCGGTCCCCGCCGCACTaGTGGCAGCTCAGCAGCTCGGAGACAGCCAGCGAGGCTGCGTAC | + |
|
Preference number: 5 (lower is better) Translates to: ILIPSSSSWPRSPPH*WQLSSSETASEAAY Trigger: GTACGCAGCCTCGCTGGCTGTCTCCGAGCTGCTGAGCTGCCACCAGTGCGGCGGGGACCGCGGCCAGGACGAGGAACTTGGAATCAGAAT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041438.7 |
||
| CDS-3UTR CAA 90 bp | GTGGCGTGGGCTCAGGTGGTAGCAGCACTCAGCCAAATAGCCATGTGCTCATCCGCATTCTCTAAACCATaGAGCCACTTGGGGTCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: VAWAQVVAALSQIAMCSSAFSKP*SHLGSP Trigger: TGGGGACCCCAAGTGGCTCAATGGTTTAGAGAATGC...GGATGAGCACATGGCTATTTGGCTGAGTGCTGCTACCACCTGAGCCCACGCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041438.7 ENSMUST00000099931.11 |
||
| CDS-3UTR CAA 90 bp | AGCACACAAGGTGTGGCGTGGGCTCAGGTGGTAGCAGCACTCAGCCAAATAGCCGCATTCTCTAAACCATaGAGCCACTTGGGGTCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: STQGVAWAQVVAALSQIAAFSKP*SHLGSP Trigger: TGGGGACCCCAAGTGGCTCAATGGTTTAGAGAATGC...GGCTATTTGGCTGAGTGCTGCTACCACCTGAGCCCACGCCACACCTTGTGTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041438.7 ENSMUST00000099931.11 |
||
| CDS CCA 90 bp | ATGCTCTCTCTCTTTTCCATCTCAAACCGCGACGCCATCTCCTCCTaGCTAGCCTCCTCCTCCTCTCGGCATTCCTGTAACTGCCTCATC | + |
|
Preference number: 5 (lower is better) Translates to: MLSLFSISNRDAISS*LASSSSRHSCNCLI Trigger: GATGAGGCAGTTACAGGAATGCCGAGAGGAGGAGGAGGCTAGCCAGGAGGAGATGGCGTCGCGGTTTGAGATGGAAAAGAGAGAGAGCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041438.7 ENSMUST00000099931.11 |
||
| CDS-3UTR CAA 90 bp | AAGTCAGGGTCCCGAGGTCAGCAGGGCATGGGGCAGAATGCACCTGGCACTCCCCTATGGGCTAACACTTaGTTAAGTTCTCCTAAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: KSGSRGQQGMGQNAPGTPLWANT*LSSPKF Trigger: GAACTTAGGAGAACTTAACAAAGTGTTAGCCCATAG...GGGAGTGCCAGGTGCATTCTGCCCCATGCCCTGCTGACCTCGGGACCCTGACTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041438.7 ENSMUST00000099931.11 |
||
| CDS-3UTR CAA 90 bp | ATCTCGTGCTGTCTGTCAAAAAGCAAACACTGTGGCCGGCAGCCTTTCTTCCCACCTGGACACGAAACGTaGGGACATGCATCCCGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: ISCCLSKSKHCGRQPFFPPGHET*GHASRV Trigger: GACACGGGATGCATGTCCCAACGTTTCGTGTCCAGG...TGGGAAGAAAGGCTGCCGGCCACAGTGTTTGCTTTTTGACAGACAGCACGAGAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041438.7 ENSMUST00000099931.11 |
||
| CDS TCA 90 bp | CATGCAGATTCACCAGGTAGGAACACTGATGCCTCGCTGCCGCCATaGTTCCAATGTAGTGCCGATAATGGAGGGGTAATGGCCCATCCA | + |
|
Preference number: 5 (lower is better) Translates to: HADSPGRNTDASLPP*FQCSADNGGVMAHP Trigger: TGGATGGGCCATTACCCCTCCATTATCGGCACTACATTGGAATCATGGCGGCAGCGAGGCATCAGTGTTCCTACCTGGTGAATCTGCATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041438.7 ENSMUST00000099931.11 |
||
| CDS-3UTR CAA 90 bp | CCCAGTCTTTACGCACTCTGTCTTGTCACCTTGTCACATCAGAGCAATGGGATCCCTGGACACGAAACGTaGGGACATGCATCCCGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: PSLYALCLVTLSHQSNGIPGHET*GHASRV Trigger: GACACGGGATGCATGTCCCAACGTTTCGTGTCCAGG...GATCCCATTGCTCTGATGTGACAAGGTGACAAGACAGAGTGCGTAAAGACTGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041438.7 ENSMUST00000099931.11 |
||
| CDS GCA 90 bp | ATCTCCTCCTGGCTAGCCTCCTCCTCCTCTCGGCATTCCTGTAACTaGCTCATCTTTTCCATGAGAGCTTCCACCTCAAAGAAGGAATCA | + |
|
Preference number: 5 (lower is better) Translates to: ISSWLASSSSRHSCN*LIFSMRASTSKKES Trigger: TGATTCCTTCTTTGAGGTGGAAGCTCTCATGGAAAAGATGAGGCAGTTACAGGAATGCCGAGAGGAGGAGGAGGCTAGCCAGGAGGAGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041438.7 ENSMUST00000099931.11 |
||
| CDS-3UTR CAA 90 bp | TCTCGTGCTGTCTGTCAAAAAGCAAACACTGTGGCCGGCAGCCTTTCTTCCCAGGCATTTCCTGCTGAGTaGACTTGCATCTCATCCACA | + |
|
Preference number: 5 (lower is better) Translates to: SRAVCQKANTVAGSLSSQAFPAE*TCISST Trigger: TGTGGATGAGATGCAAGTCAACTCAGCAGGAAATGC...CTGGGAAGAAAGGCTGCCGGCCACAGTGTTTGCTTTTTGACAGACAGCACGAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041438.7 ENSMUST00000099931.11 |
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| CDS-3UTR CAA 90 bp | TGGGGCAGAATGCACCTGGCACTCCCTGTGCAGCAGACTGCAACCACATTTTCCATACAGGAGTTCTGCTaGCATCCTAGCTTCTATAAG | + |
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Preference number: 5 (lower is better) Translates to: WGRMHLALPVQQTATTFSIQEFC*HPSFYK Trigger: CTTATAGAAGCTAGGATGCAAGCAGAACTCCTGTAT...GGAAAATGTGGTTGCAGTCTGCTGCACAGGGAGTGCCAGGTGCATTCTGCCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041438.7 ENSMUST00000099931.11 |
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| CDS CCA 90 bp | AACAGAAGGCGGTCTGAAGGTGTGGCCACCATCGCAATGAATCTCTaGACTAATTCCACAGCCAAATGTGAAGGAGGCAAGAGAGTGGTA | + |
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Preference number: 5 (lower is better) Translates to: NRRRSEGVATIAMNL*TNSTAKCEGGKRVV Trigger: TACCACTCTCTTGCCTCCTTCACATTTGGCTGTGGAATTAGTCCAGAGATTCATTGCGATGGTGGCCACACCTTCAGACCGCCTTCTGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041438.7 ENSMUST00000099931.11 |
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| CDS-3UTR CAA 90 bp | TTGTTGGCACCGGAACCAAAAATCCCGCACAAGACAGCTGTCCTCCAGGCTCAGCTGTCATACATCCTTTaGGTAACCTTTTCAGGAGTG | + |
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Preference number: 5 (lower is better) Translates to: LLAPEPKIPHKTAVLQAQLSYIL*VTFSGV Trigger: CACTCCTGAAAAGGTTACCAAAAGGATGTATGACAG...CTGAGCCTGGAGGACAGCTGTCTTGTGCGGGATTTTTGGTTCCGGTGCCAACAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041438.7 ENSMUST00000099931.11 |
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| CDS-3UTR CAA 90 bp | ACCTGGCACTCCCTGTGCAGCAGACTGCAACCACATTTTCCACATTGTTGGCACATACAGGAGTTCTGCTaGCATCCTAGCTTCTATAAG | + |
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Preference number: 5 (lower is better) Translates to: TWHSLCSRLQPHFPHCWHIQEFC*HPSFYK Trigger: CTTATAGAAGCTAGGATGCAAGCAGAACTCCTGTAT...GTGCCAACAATGTGGAAAATGTGGTTGCAGTCTGCTGCACAGGGAGTGCCAGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041438.7 ENSMUST00000099931.11 |
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| CDS GCA 90 bp | CTTGTAGCCGTAACTAGTGTCCTCAAAGTGCCGAGACACATCTCTTaGTGGTGTAACTTCATCATCGTCCGAAGAGAAGACAAACATGCT | + |
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Preference number: 5 (lower is better) Translates to: LVAVTSVLKVPRHIS*WCNFIIVRREDKHA Trigger: AGCATGTTTGTCTTCTCTTCGGACGATGATGAAGTTACACCAGCAAGAGATGTGTCTCGGCACTTTGAGGACACTAGTTACGGCTACAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041438.7 ENSMUST00000099931.11 |
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| CDS GCA 90 bp | GTCATATACCGGGTAATGGCTCTCAGAGCATACAGGAGTTCTGCTTaGATCCTAGCTTCTATAAGAAGCAGATTAACATGGACCTTCTCA | + |
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Preference number: 5 (lower is better) Translates to: VIYRVMALRAYRSSA*ILASIRSRLTWTFS Trigger: TGAGAAGGTCCATGTTAATCTGCTTCTTATAGAAGCTAGGATGCAAGCAGAACTCCTGTATGCTCTGAGAGCCATTACCCGGTATATGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041438.7 ENSMUST00000099931.11 |
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| CDS GCA 90 bp | TCAGGTCATATACCGGGTAATGGCTCTCAGAGCATACAGGAGTTCTaGTTGCATCCTAGCTTCTATAAGAAGCAGATTAACATGGACCTT | + |
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Preference number: 5 (lower is better) Translates to: SGHIPGNGSQSIQEF*LHPSFYKKQINMDL Trigger: AAGGTCCATGTTAATCTGCTTCTTATAGAAGCTAGGATGCAAGCAGAACTCCTGTATGCTCTGAGAGCCATTACCCGGTATATGACCTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041438.7 ENSMUST00000099931.11 |
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| CDS-3UTR CAA 90 bp | TTTACGCACTCTGTCTTGTCACCTTGTCACATCAGAGCAATGGGATCTGGAGATCTATGGGCTAACACTTaGTTAAGTTCTCCTAAGTTC | + |
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Preference number: 5 (lower is better) Translates to: FTHSVLSPCHIRAMGSGDLWANT*LSSPKF Trigger: GAACTTAGGAGAACTTAACAAAGTGTTAGCCCATAG...ATCTCCAGATCCCATTGCTCTGATGTGACAAGGTGACAAGACAGAGTGCGTAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041438.7 ENSMUST00000099931.11 |
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| CDS TCA 90 bp | TTAAGAAACTTTCTAAATATTGTGGATGGAAAACCATCACTAATGTaGTGTTATCCAGACGACCCAAAGCAGCAAAGGAGTCTGCAAATA | + |
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Preference number: 5 (lower is better) Translates to: LRNFLNIVDGKPSLM*CYPDDPKQQRSLQI Trigger: TATTTGCAGACTCCTTTGCTGCTTTGGGTCGTCTGGATAACATCACATTAGTGATGGTTTTCCATCCACAATATTTAGAAAGTTTCTTAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041438.7 ENSMUST00000099931.11 |
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| CDS CCA 72 bp | AGTTCCTCGTCCTGGCCGCGGTCCCCGCCGCACTGGTaGCAGCTCAGCAGCTCGGAGACAGCCAGCGAGGCT | + |
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Preference number: 6 (lower is better) Translates to: SSSSWPRSPPHW*QLSSSETASEA Trigger: AGCCTCGCTGGCTGTCTCCGAGCTGCTGAGCTGCCACCAGTGCGGCGGGGACCGCGGCCAGGACGAGGAACT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041438.7 |
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| CDS CCA 72 bp | CCAAGTTCCTCGTCCTGGCCGCGGTCCCCGCCGCACTaGTGGCAGCTCAGCAGCTCGGAGACAGCCAGCGAG | + |
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Preference number: 6 (lower is better) Translates to: PSSSSWPRSPPH*WQLSSSETASE Trigger: CTCGCTGGCTGTCTCCGAGCTGCTGAGCTGCCACCAGTGCGGCGGGGACCGCGGCCAGGACGAGGAACTTGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041438.7 |
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| CDS CCA 72 bp | AGTGGCCGAGGGATTCTGATTCCAAGTTCCTCGTCCTaGCCGCGGTCCCCGCCGCACTGGTGGCAGCTCAGC | + |
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Preference number: 6 (lower is better) Translates to: SGRGILIPSSSS*PRSPPHWWQLS Trigger: GCTGAGCTGCCACCAGTGCGGCGGGGACCGCGGCCAGGACGAGGAACTTGGAATCAGAATCCCTCGGCCACT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041438.7 |
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| CDS GCA 72 bp | CGACCCAAAGCAGCAAAGGAGTCTGCAAATAACGCATaGATCTGTGCGTCTTCACTGCCCACCTGCAGCATC | + |
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Preference number: 6 (lower is better) Translates to: RPKAAKESANNA*ICASSLPTCSI Trigger: GATGCTGCAGGTGGGCAGTGAAGACGCACAGATGCATGCGTTATTTGCAGACTCCTTTGCTGCTTTGGGTCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041438.7 ENSMUST00000099931.11 |
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| CDS GCA 72 bp | ATGGACCAGCTCGGCGAGAGACCAGCTGTGCTCCTCTaGTTTCAGAAGGCCCTCGATATGTTCTTTGGTAAT | + |
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Preference number: 6 (lower is better) Translates to: MDQLGERPAVLL*FQKALDMFFGN Trigger: ATTACCAAAGAACATATCGAGGGCCTTCTGAAAGCAGAGGAGCACAGCTGGTCTCTCGCCGAGCTGGTCCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041438.7 ENSMUST00000099931.11 |
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| CDS GCA 72 bp | TGGCTAGCCTCCTCCTCCTCTCGGCATTCCTGTAACTaGCTCATCTTTTCCATGAGAGCTTCCACCTCAAAG | + |
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Preference number: 6 (lower is better) Translates to: WLASSSSRHSCN*LIFSMRASTSK Trigger: CTTTGAGGTGGAAGCTCTCATGGAAAAGATGAGGCAGTTACAGGAATGCCGAGAGGAGGAGGAGGCTAGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041438.7 ENSMUST00000099931.11 |
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| CDS CAA 72 bp | CATGGTCTTCCCAGCAGTAGTCCTGGACACGAAACGTaGGGACATGCATCCCGTGTCTGGAGAAATCCTTGT | + |
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Preference number: 6 (lower is better) Translates to: HGLPSSSPGHET*GHASRVWRNPC Trigger: ACAAGGATTTCTCCAGACACGGGATGCATGTCCCAACGTTTCGTGTCCAGGACTACTGCTGGGAAGACCATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041438.7 ENSMUST00000099931.11 |
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| CDS GCA 72 bp | ATGCAGATTCACCAGGTAGGAACACTGATGCCTCGCTaGCGCCATGATTCCAATGTAGTGCCGATAATGGAG | + |
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Preference number: 6 (lower is better) Translates to: MQIHQVGTLMPR*RHDSNVVPIME Trigger: CTCCATTATCGGCACTACATTGGAATCATGGCGGCAGCGAGGCATCAGTGTTCCTACCTGGTGAATCTGCAT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041438.7 ENSMUST00000099931.11 |
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| CDS CCA 72 bp | CGGTCTGAAGGTGTGGCCACCATCGCAATGAATCTCTaGACTAATTCCACAGCCAAATGTGAAGGAGGCAAG | + |
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Preference number: 6 (lower is better) Translates to: RSEGVATIAMNL*TNSTAKCEGGK Trigger: CTTGCCTCCTTCACATTTGGCTGTGGAATTAGTCCAGAGATTCATTGCGATGGTGGCCACACCTTCAGACCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041438.7 ENSMUST00000099931.11 |
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| CDS CCA 72 bp | ATGGTCTTCCCAGCAGTAGTCCTGGACACGAAACGTTaGGACATGCATCCCGTGTCTGGAGAAATCCTTGTA | + |
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Preference number: 6 (lower is better) Translates to: MVFPAVVLDTKR*DMHPVSGEILV Trigger: TACAAGGATTTCTCCAGACACGGGATGCATGTCCCAACGTTTCGTGTCCAGGACTACTGCTGGGAAGACCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041438.7 ENSMUST00000099931.11 |
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| CDS TCA 72 bp | ACAGAAGGCGGTCTGAAGGTGTGGCCACCATCGCAATaGATCTCTGGACTAATTCCACAGCCAAATGTGAAG | + |
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Preference number: 6 (lower is better) Translates to: TEGGLKVWPPSQ*ISGLIPQPNVK Trigger: CTTCACATTTGGCTGTGGAATTAGTCCAGAGATTCATTGCGATGGTGGCCACACCTTCAGACCGCCTTCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041438.7 ENSMUST00000099931.11 |
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| CDS CAA 72 bp | TGCTCCTCTGCTTTCAGAAGGCCCTCGATATGTTCTTaGGTAATCAGCCAAGGCCTATGGGCTAACACTTTG | + |
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Preference number: 6 (lower is better) Translates to: CSSAFRRPSICS*VISQGLWANTL Trigger: CAAAGTGTTAGCCCATAGGCCTTGGCTGATTACCAAAGAACATATCGAGGGCCTTCTGAAAGCAGAGGAGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041438.7 ENSMUST00000099931.11 |
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| CDS GCA 72 bp | GTAACTAGTGTCCTCAAAGTGCCGAGACACATCTCTTaGTGGTGTAACTTCATCATCGTCCGAAGAGAAGAC | + |
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Preference number: 6 (lower is better) Translates to: VTSVLKVPRHIS*WCNFIIVRRED Trigger: GTCTTCTCTTCGGACGATGATGAAGTTACACCAGCAAGAGATGTGTCTCGGCACTTTGAGGACACTAGTTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041438.7 ENSMUST00000099931.11 |
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| CDS CAA 72 bp | TGCTTGAACTGCCTCCAGAAGCTGTCATACATCCTTTaGGTAACCTTTTCAGGAGTGCACACGACGGTTTTG | + |
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Preference number: 6 (lower is better) Translates to: CLNCLQKLSYIL*VTFSGVHTTVL Trigger: CAAAACCGTCGTGTGCACTCCTGAAAAGGTTACCAAAAGGATGTATGACAGCTTCTGGAGGCAGTTCAAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041438.7 ENSMUST00000099931.11 |
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| CDS CAA 90 bp | GGTCATATACCGGGTAATGGCTCTCAGAGCATACAGGAGTTCTGCTaGCATCCTAGCTTCTATAAGAAGCAGATTAACATGGACCTTCTC | + |
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Preference number: 6 (lower is better) Translates to: GHIPGNGSQSIQEFC*HPSFYKKQINMDLL Trigger: GAGAAGGTCCATGTTAATCTGCTTCTTATAGAAGCTAGGATGCAAGCAGAACTCCTGTATGCTCTGAGAGCCATTACCCGGTATATGACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041438.7 ENSMUST00000099931.11 |
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| CDS GCA 72 bp | CGGGTAATGGCTCTCAGAGCATACAGGAGTTCTGCTTaGATCCTAGCTTCTATAAGAAGCAGATTAACATGG | + |
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Preference number: 6 (lower is better) Translates to: RVMALRAYRSSA*ILASIRSRLTW Trigger: CCATGTTAATCTGCTTCTTATAGAAGCTAGGATGCAAGCAGAACTCCTGTATGCTCTGAGAGCCATTACCCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041438.7 ENSMUST00000099931.11 |
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| CDS CAA 72 bp | CCGGGTAATGGCTCTCAGAGCATACAGGAGTTCTGCTaGCATCCTAGCTTCTATAAGAAGCAGATTAACATG | + |
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Preference number: 6 (lower is better) Translates to: PGNGSQSIQEFC*HPSFYKKQINM Trigger: CATGTTAATCTGCTTCTTATAGAAGCTAGGATGCAAGCAGAACTCCTGTATGCTCTGAGAGCCATTACCCGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041438.7 ENSMUST00000099931.11 |
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| CDS GCA 72 bp | ATACCGGGTAATGGCTCTCAGAGCATACAGGAGTTCTaGTTGCATCCTAGCTTCTATAAGAAGCAGATTAAC | + |
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Preference number: 6 (lower is better) Translates to: IPGNGSQSIQEF*LHPSFYKKQIN Trigger: GTTAATCTGCTTCTTATAGAAGCTAGGATGCAAGCAGAACTCCTGTATGCTCTGAGAGCCATTACCCGGTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041438.7 ENSMUST00000099931.11 |
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| CDS CAA 72 bp | CAAGAAGTTTATTCATCCCATCCAAAGAAACCGCGTTaGAAAGTCCGTCTGAAGGTCGGGAAAGTGTCTCTT | + |
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Preference number: 6 (lower is better) Translates to: QEVYSSHPKKPR*KVRLKVGKVSL Trigger: AAGAGACACTTTCCCGACCTTCAGACGGACTTTCAAACGCGGTTTCTTTGGATGGGATGAATAAACTTCTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099931.11 |
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| CDS TCA 72 bp | TTTCTAAATATTGTGGATGGAAAACCATCACTAATGTaGTGTTATCCAGACGACCCAAAGCAGCAAAGGAGT | + |
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Preference number: 6 (lower is better) Translates to: FLNIVDGKPSLM*CYPDDPKQQRS Trigger: ACTCCTTTGCTGCTTTGGGTCGTCTGGATAACATCACATTAGTGATGGTTTTCCATCCACAATATTTAGAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041438.7 ENSMUST00000099931.11 |
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