Pregenerated sensors for SERTM1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000056306Ensembl transcript IDs: ENSMUST00000070342.4, ENSMUST00000162201.3
Found 91 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCAATTCCCTGCACAGCCTTGTGCTCACAGCTGTGCCTCATCTCATaGACACCCGTGGGTGGCCTCAGGATAGCAGCGCCCAGTGTCTGC | + |
|
Preference number: 1 (lower is better) Translates to: SIPCTALCSQLCLIS*TPVGGLRIAAPSVC Trigger: GCAGACACTGGGCGCTGCTATCCTGAGGCCACCCACGGGTGTCCATGAGATGAGGCACAGCTGTGAGCACAAGGCTGTGCAGGGAATTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070342.4 ENSMUST00000162201.3 |
||
| 3UTR GCA 90 bp | ACAGTGACCGTCACAAAGGATTCCATAGCCGGAGAGCAATCTGGCTaGAACACAAGCCAGGAGGAAACCCAGGAGCAGAAAGCAGGGCCA | + |
|
Preference number: 1 (lower is better) Translates to: TVTVTKDSIAGEQSG*NTSQEETQEQKAGP Trigger: TGGCCCTGCTTTCTGCTCCTGGGTTTCCTCCTGGCTTGTGTTGCAGCCAGATTGCTCTCCGGCTATGGAATCCTTTGTGACGGTCACTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070342.4 ENSMUST00000162201.3 |
||
| 3UTR GCA 90 bp | CGCGTGTACGTATTTACACGCATCCATGTGCCCACAGAGAGAATGTaGACTCAGAGAATGGCAGTTTGCACCCAAACTGCAGAACCTCTC | + |
|
Preference number: 1 (lower is better) Translates to: RVYVFTRIHVPTERM*TQRMAVCTQTAEPL Trigger: GAGAGGTTCTGCAGTTTGGGTGCAAACTGCCATTCTCTGAGTGCACATTCTCTCTGTGGGCACATGGATGCGTGTAAATACGTACACGCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070342.4 ENSMUST00000162201.3 |
||
| 3UTR TCA 90 bp | GGAAAATGTTTCACTCTTTCTCCCATTCCAGTCCCCAGGGTGTCCTaGCTGCACAACCTATCCGCTGGGTGTGTTTATGTGTGGGAGTTA | + |
|
Preference number: 1 (lower is better) Translates to: GKCFTLSPIPVPRVS*LHNLSAGCVYVWEL Trigger: TAACTCCCACACATAAACACACCCAGCGGATAGGTTGTGCAGTCAGGACACCCTGGGGACTGGAATGGGAGAAAGAGTGAAACATTTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070342.4 ENSMUST00000162201.3 |
||
| 3UTR GCA 90 bp | AATGTTTCACTCTTTCTCCCATTCCAGTCCCCAGGGTGTCCTGACTaGACAACCTATCCGCTGGGTGTGTTTATGTGTGGGAGTTACAGT | + |
|
Preference number: 1 (lower is better) Translates to: NVSLFLPFQSPGCPD*TTYPLGVFMCGSYS Trigger: ACTGTAACTCCCACACATAAACACACCCAGCGGATAGGTTGTGCAGTCAGGACACCCTGGGGACTGGAATGGGAGAAAGAGTGAAACATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070342.4 ENSMUST00000162201.3 |
||
| 3UTR GCA 90 bp | TCTGAATTCCTGATAGCTGTCCCACAACGTTTCCCTGAAAACCTGTaGACGCATCCACGTGTCTGTGCACACACCGCGTGTACGTATTTA | + |
|
Preference number: 1 (lower is better) Translates to: SEFLIAVPQRFPENL*THPRVCAHTACTYL Trigger: TAAATACGTACACGCGGTGTGTGCACAGACACGTGGATGCGTGCACAGGTTTTCAGGGAAACGTTGTGGGACAGCTATCAGGAATTCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070342.4 ENSMUST00000162201.3 |
||
| 3UTR GCA 90 bp | CAGGATAGCAGCGCCCAGTGTCTGCAGCTACCCAATTGCAATGTCTaGAGTTTTAGCATAAACTCACCGCTTAGAAAACCAGAGCATTAT | + |
|
Preference number: 1 (lower is better) Translates to: QDSSAQCLQLPNCNV*SFSINSPLRKPEHY Trigger: ATAATGCTCTGGTTTTCTAAGCGGTGAGTTTATGCTAAAACTGCAGACATTGCAATTGGGTAGCTGCAGACACTGGGCGCTGCTATCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070342.4 ENSMUST00000162201.3 |
||
| 3UTR CCA 90 bp | GTGTGGAATCCCATGCCTCAAAGTTTACCTGCATTTCCACCAGCATaGCTCCTCTCTTCACAAAAGAAGCATATACTCAGGAGAAAAGAA | + |
|
Preference number: 1 (lower is better) Translates to: VWNPMPQSLPAFPPA*LLSSQKKHILRRKE Trigger: TTCTTTTCTCCTGAGTATATGCTTCTTTTGTGAAGAGAGGAGCCATGCTGGTGGAAATGCAGGTAAACTTTGAGGCATGGGATTCCACAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070342.4 ENSMUST00000162201.3 |
||
| 3UTR TCA 90 bp | AACAGACTCCACTTCTTTATTTGTATACCTGTATTCCAGTCTCTCTaGACATTTCCACAAGACAGATTCCTCCCAAGTTCTACAATGCTT | + |
|
Preference number: 1 (lower is better) Translates to: NRLHFFICIPVFQSL*TFPQDRFLPSSTML Trigger: AAGCATTGTAGAACTTGGGAGGAATCTGTCTTGTGGAAATGTTCAGAGAGACTGGAATACAGGTATACAAATAAAGAAGTGGAGTCTGTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070342.4 ENSMUST00000162201.3 |
||
| 3UTR CAA 90 bp | CCCAGGAGCAGAAAGCAGGGCCAACTGCCTCATGACACACTTTCCTaGTGTCGCCAAAGCTTTCCACGCCCCTGGAACAGTCCTCATCAT | + |
|
Preference number: 2 (lower is better) Translates to: PRSRKQGQLPHDTLS*CRQSFPRPWNSPHH Trigger: ATGATGAGGACTGTTCCAGGGGCGTGGAAAGCTTTGGCGACACAAGGAAAGTGTGTCATGAGGCAGTTGGCCCTGCTTTCTGCTCCTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070342.4 ENSMUST00000162201.3 |
||
| 3UTR-3UTR CCA 90 bp | CAGCCTTGTGCTCACAGCTGTGCCTCATCTCATGGACACCCGTGGGTGGCCTCAGCATTTCCACCAGCATaGCTCCTCTCTTCACAAAAG | + |
|
Preference number: 2 (lower is better) Translates to: QPCAHSCASSHGHPWVASAFPPA*LLSSQK Trigger: CTTTTGTGAAGAGAGGAGCCATGCTGGTGGAAATGC...TGAGGCCACCCACGGGTGTCCATGAGATGAGGCACAGCTGTGAGCACAAGGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070342.4 ENSMUST00000162201.3 |
||
| 3UTR-3UTR TCA 90 bp | CAGCCTTGTGCTCACAGCTGTGCCTCATCTCATGGACACCCGTGGGTGGCCTCATGCTCATTTCTTTCATaGAGCAATACCTCCAGTACG | + |
|
Preference number: 2 (lower is better) Translates to: QPCAHSCASSHGHPWVASCSFLS*SNTSST Trigger: CGTACTGGAGGTATTGCTTCATGAAAGAAATGAGCA...TGAGGCCACCCACGGGTGTCCATGAGATGAGGCACAGCTGTGAGCACAAGGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070342.4 ENSMUST00000162201.3 |
||
| 3UTR-3UTR GCA 90 bp | ACCGCGTGTACGTATTTACACGCATCCATGTGCCCACAGAGAGAATGTGCACTCTGGCTTTCCAGTTTCTaGTCGTCTCCAGTGCCCGGT | + |
|
Preference number: 2 (lower is better) Translates to: TACTYLHASMCPQRECALWLSSF*SSPVPG Trigger: ACCGGGCACTGGAGACGAGCAGAAACTGGAAAGCCA...GAGTGCACATTCTCTCTGTGGGCACATGGATGCGTGTAAATACGTACACGCGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070342.4 ENSMUST00000162201.3 |
||
| 3UTR-3UTR CCA 90 bp | ACCGCGTGTACGTATTTACACGCATCCATGTGCCCACAGAGAGAATGTGCACTCGGGCAGCATCTGCACTaGTCTGATGGTGTCTGTAGA | + |
|
Preference number: 2 (lower is better) Translates to: TACTYLHASMCPQRECALGQHLH*SDGVCR Trigger: TCTACAGACACCATCAGACCAGTGCAGATGCTGCCC...GAGTGCACATTCTCTCTGTGGGCACATGGATGCGTGTAAATACGTACACGCGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070342.4 ENSMUST00000162201.3 |
||
| 3UTR-3UTR CCA 90 bp | TGTCTGTGCACACACCGCGTGTACGTATTTACACGCATCCATGTGCCCACAGAGGCATTTCCACCAGCATaGCTCCTCTCTTCACAAAAG | + |
|
Preference number: 2 (lower is better) Translates to: CLCTHRVYVFTRIHVPTEAFPPA*LLSSQK Trigger: CTTTTGTGAAGAGAGGAGCCATGCTGGTGGAAATGC...CTCTGTGGGCACATGGATGCGTGTAAATACGTACACGCGGTGTGTGCACAGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070342.4 ENSMUST00000162201.3 |
||
| 3UTR-3UTR CCA 90 bp | ACCGCGTGTACGTATTTACACGCATCCATGTGCCCACAGAGAGAATGTGCACTCGTAAGAGAGTCAGGGTaGAAGTGTCTCTTCCCAGTC | + |
|
Preference number: 2 (lower is better) Translates to: TACTYLHASMCPQRECALVRESG*KCLFPV Trigger: GACTGGGAAGAGACACTTCCACCCTGACTCTCTTAC...GAGTGCACATTCTCTCTGTGGGCACATGGATGCGTGTAAATACGTACACGCGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070342.4 ENSMUST00000162201.3 |
||
| 3UTR-3UTR TCA 90 bp | TGTCTGTGCACACACCGCGTGTACGTATTTACACGCATCCATGTGCCCACAGAGGATCGAGAAATCACATaGGCACACACTGACACCTTA | + |
|
Preference number: 2 (lower is better) Translates to: CLCTHRVYVFTRIHVPTEDREIT*AHTDTL Trigger: TAAGGTGTCAGTGTGTGCTCATGTGATTTCTCGATC...CTCTGTGGGCACATGGATGCGTGTAAATACGTACACGCGGTGTGTGCACAGACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070342.4 ENSMUST00000162201.3 |
||
| 3UTR-3UTR GCA 90 bp | CAGCATCTGCACTGGTCTGATGGTGTCTGTAGATACTTTGGAAATGTAAGTAGCCCCTGCACAGCCTTGTaGTCACAGCTGTGCCTCATC | + |
|
Preference number: 2 (lower is better) Translates to: QHLHWSDGVCRYFGNVSSPCTAL*SQLCLI Trigger: GATGAGGCACAGCTGTGAGCACAAGGCTGTGCAGGG...GCTACTTACATTTCCAAAGTATCTACAGACACCATCAGACCAGTGCAGATGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070342.4 ENSMUST00000162201.3 |
||
| 3UTR-3UTR TCA 90 bp | ACCGCGTGTACGTATTTACACGCATCCATGTGCCCACAGAGAGAATGTGCACTCGTGAGGAAATTAAAATaGATTGGGCCTCTTCTGGGC | + |
|
Preference number: 2 (lower is better) Translates to: TACTYLHASMCPQRECALVRKLK*IGPLLG Trigger: GCCCAGAAGAGGCCCAATTCATTTTAATTTCCTCAC...GAGTGCACATTCTCTCTGTGGGCACATGGATGCGTGTAAATACGTACACGCGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070342.4 ENSMUST00000162201.3 |
||
| 3UTR-3UTR CCA 90 bp | ACCGCGTGTACGTATTTACACGCATCCATGTGCCCACAGAGAGAATGTGCACTCGAATTGGGCCTCTTCTaGGCTTCACTTAGTAATAGC | + |
|
Preference number: 2 (lower is better) Translates to: TACTYLHASMCPQRECALELGLF*ASLSNS Trigger: GCTATTACTAAGTGAAGCCCAGAAGAGGCCCAATTC...GAGTGCACATTCTCTCTGTGGGCACATGGATGCGTGTAAATACGTACACGCGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070342.4 ENSMUST00000162201.3 |
||
| 3UTR-3UTR GCA 90 bp | GGTTACCCAGCTCAGAGTTCAGTCTGTGGACCATTTATTTTACACATTGATTTTTGGCTTTCCAGTTTCTaGTCGTCTCCAGTGCCCGGT | + |
|
Preference number: 2 (lower is better) Translates to: GYPAQSSVCGPFILHIDFWLSSF*SSPVPG Trigger: ACCGGGCACTGGAGACGAGCAGAAACTGGAAAGCCA...AAAATCAATGTGTAAAATAAATGGTCCACAGACTGAACTCTGAGCTGGGTAACC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000070342.4 ENSMUST00000162201.3 |
||
| 3UTR-3UTR GCA 90 bp | TCCACTTCTTTATTTGTATACCTGTATTCCAGTCTCTCTGAACATTTCCACAAGCCCTGCACAGCCTTGTaGTCACAGCTGTGCCTCATC | + |
|
Preference number: 2 (lower is better) Translates to: STSLFVYLYSSLSEHFHKPCTAL*SQLCLI Trigger: GATGAGGCACAGCTGTGAGCACAAGGCTGTGCAGGG...CTTGTGGAAATGTTCAGAGAGACTGGAATACAGGTATACAAATAAAGAAGTGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070342.4 ENSMUST00000162201.3 |
||
| 3UTR-3UTR TCA 90 bp | CAGCATCTGCACTGGTCTGATGGTGTCTGTAGATACTTTGGAAATGTAAGTAGCGATCGAGAAATCACATaGGCACACACTGACACCTTA | + |
|
Preference number: 2 (lower is better) Translates to: QHLHWSDGVCRYFGNVSSDREIT*AHTDTL Trigger: TAAGGTGTCAGTGTGTGCTCATGTGATTTCTCGATC...GCTACTTACATTTCCAAAGTATCTACAGACACCATCAGACCAGTGCAGATGCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070342.4 ENSMUST00000162201.3 |
||
| 3UTR-3UTR GCA 90 bp | AAACCAGAGCATTATGTCAACATGAACAAGTCATCAGAGACAGGCCCCGTGTGTTTGTGTGGAATCCCATaGCTCAAAGTTTACCTGCAT | + |
|
Preference number: 2 (lower is better) Translates to: KPEHYVNMNKSSETGPVCLCGIP*LKVYLH Trigger: ATGCAGGTAAACTTTGAGGCATGGGATTCCACACAA...ACACACGGGGCCTGTCTCTGATGACTTGTTCATGTTGACATAATGCTCTGGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070342.4 ENSMUST00000162201.3 |
||
| 3UTR-3UTR GCA 90 bp | GACGAGGTTGACTTGTCATTCGGGATGTTTGTCCTTTTATTTGTTAGAATCTCTGGAGAGCAATCTGGCTaGAACACAAGCCAGGAGGAA | + |
|
Preference number: 2 (lower is better) Translates to: DEVDLSFGMFVLLFVRISGEQSG*NTSQEE Trigger: TTCCTCCTGGCTTGTGTTGCAGCCAGATTGCTCTCC...AGAGATTCTAACAAATAAAAGGACAAACATCCCGAATGACAAGTCAACCTCGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070342.4 ENSMUST00000162201.3 |
||
| 3UTR-3UTR GCA 90 bp | AATTCGTATCCATACAAGCTGTCATTGGCTCTGATCAATTCCCTGCACAGCCTTCTGCAGCTACCCAATTaGAATGTCTGCAGTTTTAGC | + |
|
Preference number: 2 (lower is better) Translates to: NSYPYKLSLALINSLHSLLQLPN*NVCSFS Trigger: GCTAAAACTGCAGACATTGCAATTGGGTAGCTGCAG...AAGGCTGTGCAGGGAATTGATCAGAGCCAATGACAGCTTGTATGGATACGAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070342.4 ENSMUST00000162201.3 |
||
| 3UTR-3UTR TCA 90 bp | AATTCGTATCCATACAAGCTGTCATTGGCTCTGATCAATTCCCTGCACAGCCTTTGCTCATTTCTTTCATaGAGCAATACCTCCAGTACG | + |
|
Preference number: 2 (lower is better) Translates to: NSYPYKLSLALINSLHSLCSFLS*SNTSST Trigger: CGTACTGGAGGTATTGCTTCATGAAAGAAATGAGCA...AAGGCTGTGCAGGGAATTGATCAGAGCCAATGACAGCTTGTATGGATACGAATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070342.4 ENSMUST00000162201.3 |
||
| 3UTR-3UTR GCA 90 bp | TCCACTTCTTTATTTGTATACCTGTATTCCAGTCTCTCTGAACATTTCCACAAGGGAGAGCAATCTGGCTaGAACACAAGCCAGGAGGAA | + |
|
Preference number: 2 (lower is better) Translates to: STSLFVYLYSSLSEHFHKGEQSG*NTSQEE Trigger: TTCCTCCTGGCTTGTGTTGCAGCCAGATTGCTCTCC...CTTGTGGAAATGTTCAGAGAGACTGGAATACAGGTATACAAATAAAGAAGTGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070342.4 ENSMUST00000162201.3 |
||
| 3UTR-3UTR GCA 90 bp | GACGAGGTTGACTTGTCATTCGGGATGTTTGTCCTTTTATTTGTTAGAATCTCTTTCCCTGAAAACCTGTaGACGCATCCACGTGTCTGT | + |
|
Preference number: 2 (lower is better) Translates to: DEVDLSFGMFVLLFVRISFPENL*THPRVC Trigger: ACAGACACGTGGATGCGTGCACAGGTTTTCAGGGAA...AGAGATTCTAACAAATAAAAGGACAAACATCCCGAATGACAAGTCAACCTCGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070342.4 ENSMUST00000162201.3 |
||
| 3UTR-3UTR GCA 90 bp | TCCACTTCTTTATTTGTATACCTGTATTCCAGTCTCTCTGAACATTTCCACAAGGAAAGCAGGGCCAACTaGCTCATGACACACTTTCCT | + |
|
Preference number: 2 (lower is better) Translates to: STSLFVYLYSSLSEHFHKESRAN*LMTHFP Trigger: AGGAAAGTGTGTCATGAGGCAGTTGGCCCTGCTTTC...CTTGTGGAAATGTTCAGAGAGACTGGAATACAGGTATACAAATAAAGAAGTGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070342.4 ENSMUST00000162201.3 |
||
| 3UTR-3UTR CCA 90 bp | CTTTATTTGTATACCTGTATTCCAGTCTCTCTGAACATTTCCACAAGACAGATTGGGCAGCATCTGCACTaGTCTGATGGTGTCTGTAGA | + |
|
Preference number: 2 (lower is better) Translates to: LYLYTCIPVSLNISTRQIGQHLH*SDGVCR Trigger: TCTACAGACACCATCAGACCAGTGCAGATGCTGCCC...AATCTGTCTTGTGGAAATGTTCAGAGAGACTGGAATACAGGTATACAAATAAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070342.4 ENSMUST00000162201.3 |
||
| 3UTR-3UTR CCA 90 bp | GACGAGGTTGACTTGTCATTCGGGATGTTTGTCCTTTTATTTGTTAGAATCTCTTGTGCACTCAGAGAATaGCAGTTTGCACCCAAACTG | + |
|
Preference number: 2 (lower is better) Translates to: DEVDLSFGMFVLLFVRISCALRE*QFAPKL Trigger: CAGTTTGGGTGCAAACTGCCATTCTCTGAGTGCACA...AGAGATTCTAACAAATAAAAGGACAAACATCCCGAATGACAAGTCAACCTCGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070342.4 ENSMUST00000162201.3 |
||
| 3UTR-3UTR GCA 90 bp | CAAAATGATCAGAAGAGCATAAGTGACATTGCAGATGCTTCTGAATTCCTGATACAGAGAATGGCAGTTTaGACCCAAACTGCAGAACCT | + |
|
Preference number: 2 (lower is better) Translates to: QNDQKSISDIADASEFLIQRMAV*TQTAEP Trigger: AGGTTCTGCAGTTTGGGTGCAAACTGCCATTCTCTG...TATCAGGAATTCAGAAGCATCTGCAATGTCACTTATGCTCTTCTGATCATTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070342.4 ENSMUST00000162201.3 |
||
| 3UTR-3UTR GCA 90 bp | TCCACTTCTTTATTTGTATACCTGTATTCCAGTCTCTCTGAACATTTCCACAAGCCCACAGAGAGAATGTaGACTCAGAGAATGGCAGTT | + |
|
Preference number: 2 (lower is better) Translates to: STSLFVYLYSSLSEHFHKPTERM*TQRMAV Trigger: AACTGCCATTCTCTGAGTGCACATTCTCTCTGTGGG...CTTGTGGAAATGTTCAGAGAGACTGGAATACAGGTATACAAATAAAGAAGTGGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070342.4 ENSMUST00000162201.3 |
||
| 3UTR-3UTR CCA 90 bp | GACGAGGTTGACTTGTCATTCGGGATGTTTGTCCTTTTATTTGTTAGAATCTCTATGTCAGGCAGGGCCTaGAAAATGTTTCACTCTTTC | + |
|
Preference number: 2 (lower is better) Translates to: DEVDLSFGMFVLLFVRISMSGRA*KMFHSF Trigger: GAAAGAGTGAAACATTTTCCAGGCCCTGCCTGACAT...AGAGATTCTAACAAATAAAAGGACAAACATCCCGAATGACAAGTCAACCTCGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070342.4 ENSMUST00000162201.3 |
||
| 3UTR CAA 90 bp | TTATTTTACACATTGATTTTAAATTCGTATCCATACAAGCTGTCATaGGCTCTGATCAATTCCCTGCACAGCCTTGTGCTCACAGCTGTG | + |
|
Preference number: 2 (lower is better) Translates to: LFYTLILNSYPYKLS*ALINSLHSLVLTAV Trigger: CACAGCTGTGAGCACAAGGCTGTGCAGGGAATTGATCAGAGCCAATGACAGCTTGTATGGATACGAATTTAAAATCAATGTGTAAAATAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070342.4 ENSMUST00000162201.3 |
||
| 3UTR-3UTR GCA 90 bp | CTTTATTTGTATACCTGTATTCCAGTCTCTCTGAACATTTCCACAAGACAGATTAGTTTGCACCCAAACTaGAGAACCTCTCCAGTCCAA | + |
|
Preference number: 2 (lower is better) Translates to: LYLYTCIPVSLNISTRQISLHPN*RTSPVQ Trigger: TTGGACTGGAGAGGTTCTGCAGTTTGGGTGCAAACT...AATCTGTCTTGTGGAAATGTTCAGAGAGACTGGAATACAGGTATACAAATAAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070342.4 ENSMUST00000162201.3 |
||
| 3UTR CAA 90 bp | GTTACCCAGCTCAGAGTTCAGTCTGTGGACCATTTATTTTACACATaGATTTTAAATTCGTATCCATACAAGCTGTCATTGGCTCTGATC | + |
|
Preference number: 2 (lower is better) Translates to: VTQLRVQSVDHLFYT*ILNSYPYKLSLALI Trigger: GATCAGAGCCAATGACAGCTTGTATGGATACGAATTTAAAATCAATGTGTAAAATAAATGGTCCACAGACTGAACTCTGAGCTGGGTAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070342.4 ENSMUST00000162201.3 |
||
| 3UTR-3UTR TCA 90 bp | CTTTATTTGTATACCTGTATTCCAGTCTCTCTGAACATTTCCACAAGACAGATTGTGAGGAAATTAAAATaGATTGGGCCTCTTCTGGGC | + |
|
Preference number: 2 (lower is better) Translates to: LYLYTCIPVSLNISTRQIVRKLK*IGPLLG Trigger: GCCCAGAAGAGGCCCAATTCATTTTAATTTCCTCAC...AATCTGTCTTGTGGAAATGTTCAGAGAGACTGGAATACAGGTATACAAATAAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070342.4 ENSMUST00000162201.3 |
||
| 3UTR-3UTR TCA 90 bp | CAAAATGATCAGAAGAGCATAAGTGACATTGCAGATGCTTCTGAATTCCTGATATTTAAAGGATGGAAATaGAGGAGCACACGAGTGCTA | + |
|
Preference number: 2 (lower is better) Translates to: QNDQKSISDIADASEFLIFKGWK*RSTRVL Trigger: TAGCACTCGTGTGCTCCTTCATTTCCATCCTTTAAA...TATCAGGAATTCAGAAGCATCTGCAATGTCACTTATGCTCTTCTGATCATTTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070342.4 ENSMUST00000162201.3 |
||
| 3UTR-3UTR GCA 90 bp | TCCACTTCTTTATTTGTATACCTGTATTCCAGTCTCTCTGAACATTTCCACAAGTTGTGTGGAATCCCATaGCTCAAAGTTTACCTGCAT | + |
|
Preference number: 2 (lower is better) Translates to: STSLFVYLYSSLSEHFHKLCGIP*LKVYLH Trigger: ATGCAGGTAAACTTTGAGGCATGGGATTCCACACAA...CTTGTGGAAATGTTCAGAGAGACTGGAATACAGGTATACAAATAAAGAAGTGGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070342.4 ENSMUST00000162201.3 |
||
| 3UTR-3UTR TCA 90 bp | CAAAATGATCAGAAGAGCATAAGTGACATTGCAGATGCTTCTGAATTCCTGATAAAGTCACACGTTACATaGCAGCTGACACAAGATTTT | + |
|
Preference number: 2 (lower is better) Translates to: QNDQKSISDIADASEFLIKSHVT*QLTQDF Trigger: AAAATCTTGTGTCAGCTGTCATGTAACGTGTGACTT...TATCAGGAATTCAGAAGCATCTGCAATGTCACTTATGCTCTTCTGATCATTTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070342.4 ENSMUST00000162201.3 |
||
| 3UTR-3UTR CCA 90 bp | TCCACTTCTTTATTTGTATACCTGTATTCCAGTCTCTCTGAACATTTCCACAAGGAAATTAAAATGAATTaGGCCTCTTCTGGGCTTCAC | + |
|
Preference number: 2 (lower is better) Translates to: STSLFVYLYSSLSEHFHKEIKMN*ASSGLH Trigger: GTGAAGCCCAGAAGAGGCCCAATTCATTTTAATTTC...CTTGTGGAAATGTTCAGAGAGACTGGAATACAGGTATACAAATAAAGAAGTGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070342.4 ENSMUST00000162201.3 |
||
| 3UTR-3UTR CCA 90 bp | GACGAGGTTGACTTGTCATTCGGGATGTTTGTCCTTTTATTTGTTAGAATCTCTATATTTAATTCCCACTaGATGGAAACCATAGTGAGG | + |
|
Preference number: 2 (lower is better) Translates to: DEVDLSFGMFVLLFVRISIFNSH*METIVR Trigger: CCTCACTATGGTTTCCATCCAGTGGGAATTAAATAT...AGAGATTCTAACAAATAAAAGGACAAACATCCCGAATGACAAGTCAACCTCGTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070342.4 ENSMUST00000162201.3 |
||
| 3UTR-3UTR CCA 90 bp | CTTTATTTGTATACCTGTATTCCAGTCTCTCTGAACATTTCCACAAGACAGATTATATTTAATTCCCACTaGATGGAAACCATAGTGAGG | + |
|
Preference number: 2 (lower is better) Translates to: LYLYTCIPVSLNISTRQIIFNSH*METIVR Trigger: CCTCACTATGGTTTCCATCCAGTGGGAATTAAATAT...AATCTGTCTTGTGGAAATGTTCAGAGAGACTGGAATACAGGTATACAAATAAAG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070342.4 ENSMUST00000162201.3 |
||
| 3UTR-3UTR CCA 90 bp | CAAAATGATCAGAAGAGCATAAGTGACATTGCAGATGCTTCTGAATTCCTGATATCAGAGTTCAGTCTGTaGACCATTTATTTTACACAT | + |
|
Preference number: 2 (lower is better) Translates to: QNDQKSISDIADASEFLISEFSL*TIYFTH Trigger: ATGTGTAAAATAAATGGTCCACAGACTGAACTCTGA...TATCAGGAATTCAGAAGCATCTGCAATGTCACTTATGCTCTTCTGATCATTTTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070342.4 ENSMUST00000162201.3 |
||
| 3UTR GCA 72 bp | CCCGTGGGTGGCCTCAGGATAGCAGCGCCCAGTGTCTaGAGCTACCCAATTGCAATGTCTGCAGTTTTAGCA | + |
|
Preference number: 3 (lower is better) Translates to: PVGGLRIAAPSV*SYPIAMSAVLA Trigger: TGCTAAAACTGCAGACATTGCAATTGGGTAGCTGCAGACACTGGGCGCTGCTATCCTGAGGCCACCCACGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070342.4 ENSMUST00000162201.3 |
||
| 3UTR GCA 72 bp | CTCTTTCTCCCATTCCAGTCCCCAGGGTGTCCTGACTaGACAACCTATCCGCTGGGTGTGTTTATGTGTGGG | + |
|
Preference number: 3 (lower is better) Translates to: LFLPFQSPGCPD*TTYPLGVFMCG Trigger: CCCACACATAAACACACCCAGCGGATAGGTTGTGCAGTCAGGACACCCTGGGGACTGGAATGGGAGAAAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070342.4 ENSMUST00000162201.3 |
||
| 3UTR GCA 72 bp | CTGATAGCTGTCCCACAACGTTTCCCTGAAAACCTGTaGACGCATCCACGTGTCTGTGCACACACCGCGTGT | + |
|
Preference number: 3 (lower is better) Translates to: LIAVPQRFPENL*THPRVCAHTAC Trigger: ACACGCGGTGTGTGCACAGACACGTGGATGCGTGCACAGGTTTTCAGGGAAACGTTGTGGGACAGCTATCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070342.4 ENSMUST00000162201.3 |
||
| 3UTR TCA 72 bp | TTCACTCTTTCTCCCATTCCAGTCCCCAGGGTGTCCTaGCTGCACAACCTATCCGCTGGGTGTGTTTATGTG | + |
|
Preference number: 3 (lower is better) Translates to: FTLSPIPVPRVS*LHNLSAGCVYV Trigger: CACATAAACACACCCAGCGGATAGGTTGTGCAGTCAGGACACCCTGGGGACTGGAATGGGAGAAAGAGTGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070342.4 ENSMUST00000162201.3 |
||
| 3UTR GCA 72 bp | GCACACACCGCGTGTACGTATTTACACGCATCCATGTaGCCACAGAGAGAATGTGCACTCAGAGAATGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: AHTACTYLHASM*PQRECALREWQ Trigger: CTGCCATTCTCTGAGTGCACATTCTCTCTGTGGGCACATGGATGCGTGTAAATACGTACACGCGGTGTGTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070342.4 ENSMUST00000162201.3 |
||
| 3UTR CCA 72 bp | TCCATGTGCCCACAGAGAGAATGTGCACTCAGAGAATaGCAGTTTGCACCCAAACTGCAGAACCTCTCCAGT | + |
|
Preference number: 3 (lower is better) Translates to: SMCPQRECALRE*QFAPKLQNLSS Trigger: ACTGGAGAGGTTCTGCAGTTTGGGTGCAAACTGCCATTCTCTGAGTGCACATTCTCTCTGTGGGCACATGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070342.4 ENSMUST00000162201.3 |
||
| 3UTR GCA 72 bp | CCCACAGAGAGAATGTGCACTCAGAGAATGGCAGTTTaGACCCAAACTGCAGAACCTCTCCAGTCCAAGATT | + |
|
Preference number: 3 (lower is better) Translates to: PTERMCTQRMAV*TQTAEPLQSKI Trigger: AATCTTGGACTGGAGAGGTTCTGCAGTTTGGGTGCAAACTGCCATTCTCTGAGTGCACATTCTCTCTGTGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070342.4 ENSMUST00000162201.3 |
||
| 3UTR GCA 72 bp | GCACAAGAATCGATGTGGCTAGTTAGGCAGCGCACCTaGAGAGAGGCAAGTGAGTTTGACTTCGGTAGTTTT | + |
|
Preference number: 3 (lower is better) Translates to: AQESMWLVRQRT*REASEFDFGSF Trigger: AAAACTACCGAAGTCAAACTCACTTGCCTCTCTGCAGGTGCGCTGCCTAACTAGCCACATCGATTCTTGTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070342.4 ENSMUST00000162201.3 |
||
| 3UTR TCA 72 bp | ACTCACCGCTTAGAAAACCAGAGCATTATGTCAACATaGACAAGTCATCAGAGACAGGCCCCGTGTGTGGAG | + |
|
Preference number: 3 (lower is better) Translates to: THRLENQSIMST*TSHQRQAPCVE Trigger: CTCCACACACGGGGCCTGTCTCTGATGACTTGTTCATGTTGACATAATGCTCTGGTTTTCTAAGCGGTGAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070342.4 ENSMUST00000162201.3 |
||
| 3UTR-3UTR CAA 90 bp | TGTCTGTGCACACACCGCGTGTACGTATTTACACGCATCCATGTGCCCACAGAGTTAGAGGCCATGTTATaGTGCAGCAAAGCTTTAAAG | + |
|
Preference number: 3 (lower is better) Translates to: CLCTHRVYVFTRIHVPTELEAML*CSKALK Trigger: CTTTAAAGCTTTGCTGCACAATAACATGGCCTCTAA...CTCTGTGGGCACATGGATGCGTGTAAATACGTACACGCGGTGTGTGCACAGACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070342.4 ENSMUST00000162201.3 |
||
| 3UTR GCA 72 bp | AGCGCCCAGTGTCTGCAGCTACCCAATTGCAATGTCTaGAGTTTTAGCATAAACTCACCGCTTAGAAAACCA | + |
|
Preference number: 3 (lower is better) Translates to: SAQCLQLPNCNV*SFSINSPLRKP Trigger: TGGTTTTCTAAGCGGTGAGTTTATGCTAAAACTGCAGACATTGCAATTGGGTAGCTGCAGACACTGGGCGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070342.4 ENSMUST00000162201.3 |
||
| 3UTR CCA 72 bp | CCCATGCCTCAAAGTTTACCTGCATTTCCACCAGCATaGCTCCTCTCTTCACAAAAGAAGCATATACTCAGG | + |
|
Preference number: 3 (lower is better) Translates to: PMPQSLPAFPPA*LLSSQKKHILR Trigger: CCTGAGTATATGCTTCTTTTGTGAAGAGAGGAGCCATGCTGGTGGAAATGCAGGTAAACTTTGAGGCATGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070342.4 ENSMUST00000162201.3 |
||
| 3UTR GCA 72 bp | GAACTTTGTGTGGAATCCCATGCCTCAAAGTTTACCTaGATTTCCACCAGCATGGCTCCTCTCTTCACAAAA | + |
|
Preference number: 3 (lower is better) Translates to: ELCVESHASKFT*ISTSMAPLFTK Trigger: TTTTGTGAAGAGAGGAGCCATGCTGGTGGAAATGCAGGTAAACTTTGAGGCATGGGATTCCACACAAAGTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070342.4 ENSMUST00000162201.3 |
||
| 3UTR-3UTR CAA 90 bp | AAACCAGAGCATTATGTCAACATGAACAAGTCATCAGAGACAGGCCCCGTGTGTTTAGAGGCCATGTTATaGTGCAGCAAAGCTTTAAAG | + |
|
Preference number: 3 (lower is better) Translates to: KPEHYVNMNKSSETGPVCLEAML*CSKALK Trigger: CTTTAAAGCTTTGCTGCACAATAACATGGCCTCTAA...ACACACGGGGCCTGTCTCTGATGACTTGTTCATGTTGACATAATGCTCTGGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070342.4 ENSMUST00000162201.3 |
||
| 3UTR GCA 72 bp | CCAAAGCTTTCCACGCCCCTGGAACAGTCCTCATCATaGGTGACATTTGCTAAGGTGAAATTAAATAAAAAC | + |
|
Preference number: 3 (lower is better) Translates to: PKLSTPLEQSSS*VTFAKVKLNKN Trigger: GTTTTTATTTAATTTCACCTTAGCAAATGTCACGCATGATGAGGACTGTTCCAGGGGCGTGGAAAGCTTTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000070342.4 ENSMUST00000162201.3 |
||
| 3UTR CCA 72 bp | GATTTTTCACTACACGTTGTAGGGCAGCATCTGCACTaGTCTGATGGTGTCTGTAGATACTTTGGAAATGTA | + |
|
Preference number: 3 (lower is better) Translates to: DFSLHVVGQHLH*SDGVCRYFGNV Trigger: TACATTTCCAAAGTATCTACAGACACCATCAGACCAGTGCAGATGCTGCCCTACAACGTGTAGTGAAAAATC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000070342.4 ENSMUST00000162201.3 |
||
| 3UTR-3UTR CAA 90 bp | TCCACTTCTTTATTTGTATACCTGTATTCCAGTCTCTCTGAACATTTCCACAAGTCAGAGAATGGCAGTTaGCACCCAAACTGCAGAACC | + |
|
Preference number: 3 (lower is better) Translates to: STSLFVYLYSSLSEHFHKSENGS*HPNCRT Trigger: GGTTCTGCAGTTTGGGTGCAAACTGCCATTCTCTGA...CTTGTGGAAATGTTCAGAGAGACTGGAATACAGGTATACAAATAAAGAAGTGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070342.4 ENSMUST00000162201.3 |
||
| 3UTR TCA 72 bp | CATGTTATTGTGCAGCAAAGCTTTAAAGGATGGAAATaGAGGAGCACACGAGTGCTAGGAATATCACTGTAT | + |
|
Preference number: 3 (lower is better) Translates to: HVIVQQSFKGWK*RSTRVLGISLY Trigger: ATACAGTGATATTCCTAGCACTCGTGTGCTCCTTCATTTCCATCCTTTAAAGCTTTGCTGCACAATAACATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070342.4 ENSMUST00000162201.3 |
||
| 3UTR CCA 72 bp | CTGGATGGAAACCATAGTGAGGAAATTAAAATGAATTaGGCCTCTTCTGGGCTTCACTTAGTAATAGCAACA | + |
|
Preference number: 3 (lower is better) Translates to: LDGNHSEEIKMN*ASSGLHLVIAT Trigger: TGTTGCTATTACTAAGTGAAGCCCAGAAGAGGCCCAATTCATTTTAATTTCCTCACTATGGTTTCCATCCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070342.4 ENSMUST00000162201.3 |
||
| 3UTR TCA 72 bp | CACTTCTTTATTTGTATACCTGTATTCCAGTCTCTCTaGACATTTCCACAAGACAGATTCCTCCCAAGTTCT | + |
|
Preference number: 3 (lower is better) Translates to: HFFICIPVFQSL*TFPQDRFLPSS Trigger: AGAACTTGGGAGGAATCTGTCTTGTGGAAATGTTCAGAGAGACTGGAATACAGGTATACAAATAAAGAAGTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070342.4 ENSMUST00000162201.3 |
||
| 3UTR-3UTR CAA 90 bp | GACGAGGTTGACTTGTCATTCGGGATGTTTGTCCTTTTATTTGTTAGAATCTCTTGGGAGTTACAGTGTTaGAGATTATCACATTTTGTG | + |
|
Preference number: 3 (lower is better) Translates to: DEVDLSFGMFVLLFVRISWELQC*RLSHFV Trigger: CACAAAATGTGATAATCTCAAACACTGTAACTCCCA...AGAGATTCTAACAAATAAAAGGACAAACATCCCGAATGACAAGTCAACCTCGTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070342.4 ENSMUST00000162201.3 |
||
| 3UTR-3UTR CAA 90 bp | CTTTATTTGTATACCTGTATTCCAGTCTCTCTGAACATTTCCACAAGACAGATTTGCTGTCTAAAGTCTTaGAATCTATTCCAGGAGAAA | + |
|
Preference number: 3 (lower is better) Translates to: LYLYTCIPVSLNISTRQICCLKS*NLFQEK Trigger: TTTCTCCTGGAATAGATTCAAAGACTTTAGACAGCA...AATCTGTCTTGTGGAAATGTTCAGAGAGACTGGAATACAGGTATACAAATAAAG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070342.4 ENSMUST00000162201.3 |
||
| CDS-3UTR CCA 90 bp | TGTCTGTGCACACACCGCGTGTACGTATTTACACGCATCCATGTGCCCACAGAGACGAGTCCACCGACGTaGACAGCGATGTGGGAAACA | + |
|
Preference number: 4 (lower is better) Translates to: CLCTHRVYVFTRIHVPTETSPPT*TAMWET Trigger: TGTTTCCCACATCGCTGTCCACGTCGGTGGACTCGT...CTCTGTGGGCACATGGATGCGTGTAAATACGTACACGCGGTGTGTGCACAGACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070342.4 ENSMUST00000162201.3 |
||
| 3UTR CAA 72 bp | AGAAAGCAGGGCCAACTGCCTCATGACACACTTTCCTaGTGTCGCCAAAGCTTTCCACGCCCCTGGAACAGT | + |
|
Preference number: 4 (lower is better) Translates to: RKQGQLPHDTLS*CRQSFPRPWNS Trigger: ACTGTTCCAGGGGCGTGGAAAGCTTTGGCGACACAAGGAAAGTGTGTCATGAGGCAGTTGGCCCTGCTTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070342.4 ENSMUST00000162201.3 |
||
| CDS-3UTR TCA 90 bp | TGTCTGTGCACACACCGCGTGTACGTATTTACACGCATCCATGTGCCCACAGAGACACCTCTAGGTTGGTaGAAGAACTCCCAGCGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: CLCTHRVYVFTRIHVPTETPLGW*KNSQRH Trigger: GTGACGCTGGGAGTTCTTTCACCAACCTAGAGGTGT...CTCTGTGGGCACATGGATGCGTGTAAATACGTACACGCGGTGTGTGCACAGACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070342.4 ENSMUST00000162201.3 |
||
| CDS-3UTR TCA 90 bp | AGCGCCCAGTGTCTGCAGCTACCCAATTGCAATGTCTGCAGTTTTAGCATAAACACACCTCTAGGTTGGTaGAAGAACTCCCAGCGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: SAQCLQLPNCNVCSFSINTPLGW*KNSQRH Trigger: GTGACGCTGGGAGTTCTTTCACCAACCTAGAGGTGT...GTTTATGCTAAAACTGCAGACATTGCAATTGGGTAGCTGCAGACACTGGGCGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070342.4 ENSMUST00000162201.3 |
||
| CDS-3UTR CCA 90 bp | CAGCATCTGCACTGGTCTGATGGTGTCTGTAGATACTTTGGAAATGTAAGTAGCCATAGATGTAGACGTTaGACAGGTGGCCCGAGGACG | + |
|
Preference number: 4 (lower is better) Translates to: QHLHWSDGVCRYFGNVSSHRCRR*TGGPRT Trigger: CGTCCTCGGGCCACCTGTCCAACGTCTACATCTATG...GCTACTTACATTTCCAAAGTATCTACAGACACCATCAGACCAGTGCAGATGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070342.4 ENSMUST00000162201.3 |
||
| CDS-3UTR TCA 90 bp | AAACCAGAGCATTATGTCAACATGAACAAGTCATCAGAGACAGGCCCCGTGTGTGGAAAGCCAGGAGGCTaGGGAATATGGAGACATAGA | + |
|
Preference number: 4 (lower is better) Translates to: KPEHYVNMNKSSETGPVCGKPGG*GIWRHR Trigger: TCTATGTCTCCATATTCCTCAGCCTCCTGGCTTTCC...ACACACGGGGCCTGTCTCTGATGACTTGTTCATGTTGACATAATGCTCTGGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070342.4 ENSMUST00000162201.3 |
||
| CDS-3UTR TCA 90 bp | AGCGCCCAGTGTCTGCAGCTACCCAATTGCAATGTCTGCAGTTTTAGCATAAACATGTTCTTCAGCCTCTaGAGAGCAATGATCAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SAQCLQLPNCNVCSFSINMFFSL*RAMISS Trigger: GCTGCTGATCATTGCTCTTCAGAGGCTGAAGAACAT...GTTTATGCTAAAACTGCAGACATTGCAATTGGGTAGCTGCAGACACTGGGCGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070342.4 ENSMUST00000162201.3 |
||
| CDS-3UTR TCA 90 bp | CAGCATCTGCACTGGTCTGATGGTGTCTGTAGATACTTTGGAAATGTAAGTAGCGGAAAGCCAGGAGGCTaGGGAATATGGAGACATAGA | + |
|
Preference number: 4 (lower is better) Translates to: QHLHWSDGVCRYFGNVSSGKPGG*GIWRHR Trigger: TCTATGTCTCCATATTCCTCAGCCTCCTGGCTTTCC...GCTACTTACATTTCCAAAGTATCTACAGACACCATCAGACCAGTGCAGATGCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070342.4 ENSMUST00000162201.3 |
||
| CDS-3UTR TCA 90 bp | GCCTCAAAGTTTACCTGCATTTCCACCAGCATGGCTCCTCTCTTCACAAAAGAAATGTTCTTCAGCCTCTaGAGAGCAATGATCAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: ASKFTCISTSMAPLFTKEMFFSL*RAMISS Trigger: GCTGCTGATCATTGCTCTTCAGAGGCTGAAGAACAT...TTCTTTTGTGAAGAGAGGAGCCATGCTGGTGGAAATGCAGGTAAACTTTGAGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070342.4 ENSMUST00000162201.3 |
||
| CDS-3UTR TCA 90 bp | CAGCATCTGCACTGGTCTGATGGTGTCTGTAGATACTTTGGAAATGTAAGTAGCAGGAGCTGGAAGAGATaGTGTTCTTCAGCCTCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: QHLHWSDGVCRYFGNVSSRSWKR*CSSASE Trigger: TTCAGAGGCTGAAGAACATCATCTCTTCCAGCTCCT...GCTACTTACATTTCCAAAGTATCTACAGACACCATCAGACCAGTGCAGATGCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070342.4 ENSMUST00000162201.3 |
||
| CDS-3UTR CCA 90 bp | GGTTACCCAGCTCAGAGTTCAGTCTGTGGACCATTTATTTTACACATTGATTTTACGAGTCCACCGACGTaGACAGCGATGTGGGAAACA | + |
|
Preference number: 4 (lower is better) Translates to: GYPAQSSVCGPFILHIDFTSPPT*TAMWET Trigger: TGTTTCCCACATCGCTGTCCACGTCGGTGGACTCGT...AAAATCAATGTGTAAAATAAATGGTCCACAGACTGAACTCTGAGCTGGGTAACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070342.4 ENSMUST00000162201.3 |
||
| 3UTR CAA 72 bp | AGTTACCTCTGCAGGACGGGACCTGACGAGGTTGACTaGTCATTCGGGATGTTTGTCCTTTTATTTGTTAGA | + |
|
Preference number: 4 (lower is better) Translates to: SYLCRTGPDEVD*SFGMFVLLFVR Trigger: TCTAACAAATAAAAGGACAAACATCCCGAATGACAAGTCAACCTCGTCAGGTCCCGTCCTGCAGAGGTAACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070342.4 ENSMUST00000162201.3 |
||
| CDS-3UTR CCA 90 bp | GACGAGGTTGACTTGTCATTCGGGATGTTTGTCCTTTTATTTGTTAGAATCTCTACGTGGACAGCGATGTaGGAAACAGCTCCAGGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: DEVDLSFGMFVLLFVRISTWTAM*ETAPGK Trigger: CTTTCCTGGAGCTGTTTCCCACATCGCTGTCCACGT...AGAGATTCTAACAAATAAAAGGACAAACATCCCGAATGACAAGTCAACCTCGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070342.4 ENSMUST00000162201.3 |
||
| CDS-3UTR CCA 90 bp | TCCACTTCTTTATTTGTATACCTGTATTCCAGTCTCTCTGAACATTTCCACAAGACGTGGACAGCGATGTaGGAAACAGCTCCAGGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: STSLFVYLYSSLSEHFHKTWTAM*ETAPGK Trigger: CTTTCCTGGAGCTGTTTCCCACATCGCTGTCCACGT...CTTGTGGAAATGTTCAGAGAGACTGGAATACAGGTATACAAATAAAGAAGTGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070342.4 ENSMUST00000162201.3 |
||
| 3UTR CAA 72 bp | CGGGACCTGACGAGGTTGACTTGTCATTCGGGATGTTaGTCCTTTTATTTGTTAGAATCTCTTTACCCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: RDLTRLTCHSGC*SFYLLESLYPK Trigger: CTTTGGGTAAAGAGATTCTAACAAATAAAAGGACAAACATCCCGAATGACAAGTCAACCTCGTCAGGTCCCG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070342.4 ENSMUST00000162201.3 |
||
| 3UTR CAA 72 bp | CCTGCAGAGAGGCAAGTGAGTTTGACTTCGGTAGTTTaGCTGTCTAAAGTCTTTGAATCTATTCCAGGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: PAERQVSLTSVV*LSKVFESIPGE Trigger: TTCTCCTGGAATAGATTCAAAGACTTTAGACAGCAAAACTACCGAAGTCAAACTCACTTGCCTCTCTGCAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070342.4 ENSMUST00000162201.3 |
||
| 3UTR CAA 72 bp | TTTAAATACAGAAAATATCTTCTAAACAGTCTCTACTaGGCTTTCCAGTTTCTGCTCGTCTCCAGTGCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: FKYRKYLLNSLY*AFQFLLVSSAR Trigger: CCGGGCACTGGAGACGAGCAGAAACTGGAAAGCCAAGTAGAGACTGTTTAGAAGATATTTTCTGTATTTAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070342.4 ENSMUST00000162201.3 |
||
| 3UTR CAA 72 bp | ACATTGATTTTAAATTCGTATCCATACAAGCTGTCATaGGCTCTGATCAATTCCCTGCACAGCCTTGTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: TLILNSYPYKLS*ALINSLHSLVL Trigger: GAGCACAAGGCTGTGCAGGGAATTGATCAGAGCCAATGACAGCTTGTATGGATACGAATTTAAAATCAATGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070342.4 ENSMUST00000162201.3 |
||
| CDS CCA 90 bp | TGGACAGGTGGCCCGAGGACGAGTCCACCGACGTGGACAGCGATGTaGGAAACAGCTCCAGGAAAGTTCCATTCTCCACACTTCCGGCAA | + |
|
Preference number: 5 (lower is better) Translates to: WTGGPRTSPPTWTAM*ETAPGKFHSPHFRQ Trigger: TTGCCGGAAGTGTGGAGAATGGAACTTTCCTGGAGCTGTTTCCCACATCGCTGTCCACGTCGGTGGACTCGTCCTCGGGCCACCTGTCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070342.4 ENSMUST00000162201.3 |
||
| CDS CCA 90 bp | AGATGTAGACGTTGGACAGGTGGCCCGAGGACGAGTCCACCGACGTaGACAGCGATGTGGGAAACAGCTCCAGGAAAGTTCCATTCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: RCRRWTGGPRTSPPT*TAMWETAPGKFHSP Trigger: TGGAGAATGGAACTTTCCTGGAGCTGTTTCCCACATCGCTGTCCACGTCGGTGGACTCGTCCTCGGGCCACCTGTCCAACGTCTACATCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070342.4 ENSMUST00000162201.3 |
||
| CDS CCA 72 bp | CGTTGGACAGGTGGCCCGAGGACGAGTCCACCGACGTaGACAGCGATGTGGGAAACAGCTCCAGGAAAGTTC | + |
|
Preference number: 6 (lower is better) Translates to: RWTGGPRTSPPT*TAMWETAPGKF Trigger: GAACTTTCCTGGAGCTGTTTCCCACATCGCTGTCCACGTCGGTGGACTCGTCCTCGGGCCACCTGTCCAACG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070342.4 ENSMUST00000162201.3 |
||
| CDS CCA 72 bp | GGCCCGAGGACGAGTCCACCGACGTGGACAGCGATGTaGGAAACAGCTCCAGGAAAGTTCCATTCTCCACAC | + |
|
Preference number: 6 (lower is better) Translates to: GPRTSPPTWTAM*ETAPGKFHSPH Trigger: GTGTGGAGAATGGAACTTTCCTGGAGCTGTTTCCCACATCGCTGTCCACGTCGGTGGACTCGTCCTCGGGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070342.4 ENSMUST00000162201.3 |
||
| CDS TCA 72 bp | TACGAGGAGCTGGAAGAGATGATGTTCTTCAGCCTCTaGAGAGCAATGATCAGCAGCAGAAGCAGGAAAGCC | + |
|
Preference number: 6 (lower is better) Translates to: YEELEEMMFFSL*RAMISSRSRKA Trigger: GGCTTTCCTGCTTCTGCTGCTGATCATTGCTCTTCAGAGGCTGAAGAACATCATCTCTTCCAGCTCCTCGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070342.4 ENSMUST00000162201.3 |
||