Pregenerated sensors for SERTAD4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000016262Ensembl transcript IDs: ENSMUST00000016406.14, ENSMUST00000155503.3, ENSMUST00000155579.8
Found 144 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TATGTGCCACCTCTCTATCATCACCCCATCAGAGGTGGCTCTGTATaGCACCTCTCTAGCCACCCACTACCCATCACAGGCAAGCAAGGA | + |
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Preference number: 1 (lower is better) Translates to: YVPPLYHHPIRGGSV*HLSSHPLPITGKQG Trigger: TCCTTGCTTGCCTGTGATGGGTAGTGGGTGGCTAGAGAGGTGGCATACAGAGCCACCTCTGATGGGGTGATGATAGAGAGGTGGCACATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016406.14 ENSMUST00000155579.8 |
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| 3UTR GCA 90 bp | AGGAAACAAAACAGCCCAAAGCTGGGAGAGCCCAGACCAAGCAACTaGTCGTTGCCATGGAGAACCAAGGCAGCCTTCTCTGTGCCTGAT | + |
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Preference number: 1 (lower is better) Translates to: RKQNSPKLGEPRPSN*SLPWRTKAAFSVPD Trigger: ATCAGGCACAGAGAAGGCTGCCTTGGTTCTCCATGGCAACGAGCAGTTGCTTGGTCTGGGCTCTCCCAGCTTTGGGCTGTTTTGTTTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016406.14 ENSMUST00000155579.8 |
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| 3UTR TCA 90 bp | CAACTGCTCGTTGCCATGGAGAACCAAGGCAGCCTTCTCTGTGCCTaGTGGCCTTCCCCATTGTCTTCTCCATCTCTACCCAAAAATATC | + |
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Preference number: 1 (lower is better) Translates to: QLLVAMENQGSLLCA*WPSPLSSPSLPKNI Trigger: GATATTTTTGGGTAGAGATGGAGAAGACAATGGGGAAGGCCATCAGGCACAGAGAAGGCTGCCTTGGTTCTCCATGGCAACGAGCAGTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000016406.14 ENSMUST00000155579.8 |
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| 3UTR TCA 90 bp | GATGCCTACTGTACAGATGTTTTGTGCAATCTGATCTCCAGGCAATaGGACAACCCGGCGTGGTGTTCACTGCATGATTTTATCTGTTGT | + |
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Preference number: 1 (lower is better) Translates to: DAYCTDVLCNLISRQ*DNPAWCSLHDFICC Trigger: ACAACAGATAAAATCATGCAGTGAACACCACGCCGGGTTGTCTCATTGCCTGGAGATCAGATTGCACAAAACATCTGTACAGTAGGCATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016406.14 ENSMUST00000155579.8 |
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| 3UTR CCA 90 bp | CTAATTAACTGGCAAACATGTTGCATTTGGCTAGCGCAGGTTCCTTaGAGGGGCAGTGGGAATATAACGAGGGCATGTTTTCTTCTATCT | + |
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Preference number: 1 (lower is better) Translates to: LINWQTCCIWLAQVP*RGSGNITRACFLLS Trigger: AGATAGAAGAAAACATGCCCTCGTTATATTCCCACTGCCCCTCCAAGGAACCTGCGCTAGCCAAATGCAACATGTTTGCCAGTTAATTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016406.14 ENSMUST00000155579.8 |
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| 3UTR CCA 90 bp | TGTTTACCAAGTAACTACCTAATTAACTGGCAAACATGTTGCATTTaGCTAGCGCAGGTTCCTTGGAGGGGCAGTGGGAATATAACGAGG | + |
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Preference number: 1 (lower is better) Translates to: CLPSNYLINWQTCCI*LAQVPWRGSGNITR Trigger: CCTCGTTATATTCCCACTGCCCCTCCAAGGAACCTGCGCTAGCCAAATGCAACATGTTTGCCAGTTAATTAGGTAGTTACTTGGTAAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016406.14 ENSMUST00000155579.8 |
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| 3UTR GCA 90 bp | TTGATTTGTTTACCAAGTAACTACCTAATTAACTGGCAAACATGTTaGATTTGGCTAGCGCAGGTTCCTTGGAGGGGCAGTGGGAATATA | + |
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Preference number: 1 (lower is better) Translates to: LICLPSNYLINWQTC*IWLAQVPWRGSGNI Trigger: TATATTCCCACTGCCCCTCCAAGGAACCTGCGCTAGCCAAATGCAACATGTTTGCCAGTTAATTAGGTAGTTACTTGGTAAACAAATCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016406.14 ENSMUST00000155579.8 |
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| 3UTR-3UTR TCA 90 bp | ACCAAGGCAGCCTTCTCTGTGCCTGATGGCCTTCCCCATTGTCTTCTCCATCTCCTGATCTCCAGGCAATaGGACAACCCGGCGTGGTGT | + |
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Preference number: 2 (lower is better) Translates to: TKAAFSVPDGLPHCLLHLLISRQ*DNPAWC Trigger: ACACCACGCCGGGTTGTCTCATTGCCTGGAGATCAG...GAGATGGAGAAGACAATGGGGAAGGCCATCAGGCACAGAGAAGGCTGCCTTGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016406.14 ENSMUST00000155579.8 |
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| 3UTR-3UTR GCA 90 bp | AAACAAAACAGCCCAAAGCTGGGAGAGCCCAGACCAAGCAACTGCTCGTTGCCAAGGCAGCCTTCTCTGTaGCTGATGGCCTTCCCCATT | + |
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Preference number: 2 (lower is better) Translates to: KQNSPKLGEPRPSNCSLPRQPSL*LMAFPI Trigger: AATGGGGAAGGCCATCAGGCACAGAGAAGGCTGCCT...TGGCAACGAGCAGTTGCTTGGTCTGGGCTCTCCCAGCTTTGGGCTGTTTTGTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016406.14 ENSMUST00000155579.8 |
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| 3UTR-3UTR CCA 90 bp | AAACAAAACAGCCCAAAGCTGGGAGAGCCCAGACCAAGCAACTGCTCGTTGCCACCACCCCATCAAAGATaGCTCTGTATGTGCCACCTC | + |
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Preference number: 2 (lower is better) Translates to: KQNSPKLGEPRPSNCSLPPPHQR*LCMCHL Trigger: GAGGTGGCACATACAGAGCCATCTTTGATGGGGTGG...TGGCAACGAGCAGTTGCTTGGTCTGGGCTCTCCCAGCTTTGGGCTGTTTTGTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016406.14 ENSMUST00000155579.8 |
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| 3UTR-3UTR GCA 90 bp | GAGAGCCCAGACCAAGCAACTGCTCGTTGCCATGGAGAACCAAGGCAGCCTTCTAACTGGCAAACATGTTaGATTTGGCTAGCGCAGGTT | + |
|
Preference number: 2 (lower is better) Translates to: ESPDQATARCHGEPRQPSNWQTC*IWLAQV Trigger: AACCTGCGCTAGCCAAATGCAACATGTTTGCCAGTT...AGAAGGCTGCCTTGGTTCTCCATGGCAACGAGCAGTTGCTTGGTCTGGGCTCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016406.14 ENSMUST00000155579.8 |
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| 3UTR-3UTR TCA 90 bp | GAGAGCCCAGACCAAGCAACTGCTCGTTGCCATGGAGAACCAAGGCAGCCTTCTATCCAAAGTAAAAACTaGTCATGCTGTGCGTGCTTC | + |
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Preference number: 2 (lower is better) Translates to: ESPDQATARCHGEPRQPSIQSKN*SCCACF Trigger: GAAGCACGCACAGCATGATCAGTTTTTACTTTGGAT...AGAAGGCTGCCTTGGTTCTCCATGGCAACGAGCAGTTGCTTGGTCTGGGCTCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000016406.14 ENSMUST00000155579.8 |
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| 3UTR-3UTR GCA 90 bp | ACCAAGGCAGCCTTCTCTGTGCCTGATGGCCTTCCCCATTGTCTTCTCCATCTCAACTGGCAAACATGTTaGATTTGGCTAGCGCAGGTT | + |
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Preference number: 2 (lower is better) Translates to: TKAAFSVPDGLPHCLLHLNWQTC*IWLAQV Trigger: AACCTGCGCTAGCCAAATGCAACATGTTTGCCAGTT...GAGATGGAGAAGACAATGGGGAAGGCCATCAGGCACAGAGAAGGCTGCCTTGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016406.14 ENSMUST00000155579.8 |
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| 3UTR-3UTR GCA 90 bp | AAACAAAACAGCCCAAAGCTGGGAGAGCCCAGACCAAGCAACTGCTCGTTGCCACATCAAAGATGGCTTTaGATGCCACCTCCCTATGAC | + |
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Preference number: 2 (lower is better) Translates to: KQNSPKLGEPRPSNCSLPHQRWL*MPPPYD Trigger: GTCATAGGGAGGTGGCATGCAAAGCCATCTTTGATG...TGGCAACGAGCAGTTGCTTGGTCTGGGCTCTCCCAGCTTTGGGCTGTTTTGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016406.14 ENSMUST00000155579.8 |
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| 3UTR-3UTR GCA 90 bp | ACCAAGGCAGCCTTCTCTGTGCCTGATGGCCTTCCCCATTGTCTTCTCCATCTCCGGCGTGGTGTTCACTaGATGATTTTATCTGTTGTA | + |
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Preference number: 2 (lower is better) Translates to: TKAAFSVPDGLPHCLLHLRRGVH*MILSVV Trigger: TACAACAGATAAAATCATGCAGTGAACACCACGCCG...GAGATGGAGAAGACAATGGGGAAGGCCATCAGGCACAGAGAAGGCTGCCTTGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016406.14 ENSMUST00000155579.8 |
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| 3UTR-3UTR CCA 90 bp | AAACAAAACAGCCCAAAGCTGGGAGAGCCCAGACCAAGCAACTGCTCGTTGCCAAGTTTCCAAACTGCATaGATCCACCCTGTGTTTTGT | + |
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Preference number: 2 (lower is better) Translates to: KQNSPKLGEPRPSNCSLPSFQTA*IHPVFC Trigger: ACAAAACACAGGGTGGATCCATGCAGTTTGGAAACT...TGGCAACGAGCAGTTGCTTGGTCTGGGCTCTCCCAGCTTTGGGCTGTTTTGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016406.14 ENSMUST00000155579.8 |
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| 3UTR-3UTR TCA 90 bp | ACCAAGGCAGCCTTCTCTGTGCCTGATGGCCTTCCCCATTGTCTTCTCCATCTCGTGGTGTTCACTGCATaGTTTTATCTGTTGTACAAA | + |
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Preference number: 2 (lower is better) Translates to: TKAAFSVPDGLPHCLLHLVVFTA*FYLLYK Trigger: TTTGTACAACAGATAAAATCATGCAGTGAACACCAC...GAGATGGAGAAGACAATGGGGAAGGCCATCAGGCACAGAGAAGGCTGCCTTGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016406.14 ENSMUST00000155579.8 |
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| 3UTR-3UTR GCA 90 bp | ATGACAAGCGAGCCCCATTTCTCCAAAATAACGTTCCGCAACCTACAAACCTTTCAAGCAACTGCTCGTTaGCATGGAGAACCAAGGCAG | + |
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Preference number: 2 (lower is better) Translates to: MTSEPHFSKITFRNLQTFQATAR*HGEPRQ Trigger: CTGCCTTGGTTCTCCATGGCAACGAGCAGTTGCTTG...AAAGGTTTGTAGGTTGCGGAACGTTATTTTGGAGAAATGGGGCTCGCTTGTCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016406.14 ENSMUST00000155579.8 |
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| 3UTR-3UTR CCA 90 bp | ATGACAAGCGAGCCCCATTTCTCCAAAATAACGTTCCGCAACCTACAAACCTTTAAAACAGCCCAAAGCTaGGAGAGCCCAGACCAAGCA | + |
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Preference number: 2 (lower is better) Translates to: MTSEPHFSKITFRNLQTFKTAQS*ESPDQA Trigger: TGCTTGGTCTGGGCTCTCCCAGCTTTGGGCTGTTTT...AAAGGTTTGTAGGTTGCGGAACGTTATTTTGGAGAAATGGGGCTCGCTTGTCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000016406.14 ENSMUST00000155579.8 |
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| 3UTR-3UTR TCA 90 bp | AAACAAAACAGCCCAAAGCTGGGAGAGCCCAGACCAAGCAACTGCTCGTTGCCAGTGGTGTTCACTGCATaGTTTTATCTGTTGTACAAA | + |
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Preference number: 2 (lower is better) Translates to: KQNSPKLGEPRPSNCSLPVVFTA*FYLLYK Trigger: TTTGTACAACAGATAAAATCATGCAGTGAACACCAC...TGGCAACGAGCAGTTGCTTGGTCTGGGCTCTCCCAGCTTTGGGCTGTTTTGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016406.14 ENSMUST00000155579.8 |
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| 3UTR-3UTR CCA 90 bp | AAGCGAGCCCCATTTCTCCAAAATAACGTTCCGCAACCTACAAACCTTTACATTCTAGCGCAGGTTCCTTaGAGGGGCAGTGGGAATATA | + |
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Preference number: 2 (lower is better) Translates to: KRAPFLQNNVPQPTNLYILAQVP*RGSGNI Trigger: TATATTCCCACTGCCCCTCCAAGGAACCTGCGCTAG...AATGTAAAGGTTTGTAGGTTGCGGAACGTTATTTTGGAGAAATGGGGCTCGCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000016406.14 ENSMUST00000155579.8 |
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| 3UTR-3UTR CCA 90 bp | AAGCGAGCCCCATTTCTCCAAAATAACGTTCCGCAACCTACAAACCTTTACATTAAAACAGCCCAAAGCTaGGAGAGCCCAGACCAAGCA | + |
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Preference number: 2 (lower is better) Translates to: KRAPFLQNNVPQPTNLYIKTAQS*ESPDQA Trigger: TGCTTGGTCTGGGCTCTCCCAGCTTTGGGCTGTTTT...AATGTAAAGGTTTGTAGGTTGCGGAACGTTATTTTGGAGAAATGGGGCTCGCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000016406.14 ENSMUST00000155579.8 |
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| 3UTR-3UTR GCA 90 bp | ATGACAAGCGAGCCCCATTTCTCCAAAATAACGTTCCGCAACCTACAAACCTTTAGATGGCTCTGTATGTaGCACCTCTCTATCATCACC | + |
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Preference number: 2 (lower is better) Translates to: MTSEPHFSKITFRNLQTFRWLCM*HLSIIT Trigger: GGTGATGATAGAGAGGTGGCACATACAGAGCCATCT...AAAGGTTTGTAGGTTGCGGAACGTTATTTTGGAGAAATGGGGCTCGCTTGTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016406.14 ENSMUST00000155579.8 |
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| 3UTR-3UTR GCA 90 bp | ATGACAAGCGAGCCCCATTTCTCCAAAATAACGTTCCGCAACCTACAAACCTTTAAAGATGGCTTTGCATaGCACCTCCCTATGACCCTA | + |
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Preference number: 2 (lower is better) Translates to: MTSEPHFSKITFRNLQTFKDGFA*HLPMTL Trigger: TAGGGTCATAGGGAGGTGGCATGCAAAGCCATCTTT...AAAGGTTTGTAGGTTGCGGAACGTTATTTTGGAGAAATGGGGCTCGCTTGTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016406.14 ENSMUST00000155579.8 |
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| 3UTR-3UTR CCA 90 bp | TCCTTTTGGCATTTGGTTCCTGTAAATAATTGTTTTAAGAGACCCAAGTCACCCCCACCCCATCAAAGATaGCTCTGTATGTGCCACCTC | + |
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Preference number: 2 (lower is better) Translates to: SFWHLVPVNNCFKRPKSPPPHQR*LCMCHL Trigger: GAGGTGGCACATACAGAGCCATCTTTGATGGGGTGG...GGGTGACTTGGGTCTCTTAAAACAATTATTTACAGGAACCAAATGCCAAAAGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000016406.14 ENSMUST00000155579.8 |
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| 3UTR-3UTR TCA 90 bp | TTTACTCAGGAAAGAAAAATACTGCATCACATCGAAGCAGGCACCTCTGCTGGTATGTTTTGTGCAATCTaGTCTCCAGGCAATGAGACA | + |
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Preference number: 2 (lower is better) Translates to: FTQERKILHHIEAGTSAGMFCAI*SPGNET Trigger: TGTCTCATTGCCTGGAGATCAGATTGCACAAAACAT...ACCAGCAGAGGTGCCTGCTTCGATGTGATGCAGTATTTTTCTTTCCTGAGTAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000016406.14 ENSMUST00000155579.8 |
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| 3UTR-3UTR TCA 90 bp | AAGCGAGCCCCATTTCTCCAAAATAACGTTCCGCAACCTACAAACCTTTACATTATCCAAAGTAAAAACTaGTCATGCTGTGCGTGCTTC | + |
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Preference number: 2 (lower is better) Translates to: KRAPFLQNNVPQPTNLYIIQSKN*SCCACF Trigger: GAAGCACGCACAGCATGATCAGTTTTTACTTTGGAT...AATGTAAAGGTTTGTAGGTTGCGGAACGTTATTTTGGAGAAATGGGGCTCGCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000016406.14 ENSMUST00000155579.8 |
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| 3UTR-3UTR TCA 90 bp | TTTACTCAGGAAAGAAAAATACTGCATCACATCGAAGCAGGCACCTCTGCTGGTGTATACTTTGAAACATaGAGTTGGCTTTCCTTGGCA | + |
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Preference number: 2 (lower is better) Translates to: FTQERKILHHIEAGTSAGVYFET*SWLSLA Trigger: TGCCAAGGAAAGCCAACTTCATGTTTCAAAGTATAC...ACCAGCAGAGGTGCCTGCTTCGATGTGATGCAGTATTTTTCTTTCCTGAGTAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000016406.14 ENSMUST00000155579.8 |
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| 3UTR-3UTR TCA 90 bp | ATGACAAGCGAGCCCCATTTCTCCAAAATAACGTTCCGCAACCTACAAACCTTTGTATACTTTGAAACATaGAGTTGGCTTTCCTTGGCA | + |
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Preference number: 2 (lower is better) Translates to: MTSEPHFSKITFRNLQTFVYFET*SWLSLA Trigger: TGCCAAGGAAAGCCAACTTCATGTTTCAAAGTATAC...AAAGGTTTGTAGGTTGCGGAACGTTATTTTGGAGAAATGGGGCTCGCTTGTCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016406.14 ENSMUST00000155579.8 |
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| 3UTR-3UTR TCA 90 bp | CATTGTGCTTCTCAATCAACAGCAAAAGTCATATATAGAAACCACATGCTCTTAGCATGCCACGGGCTGTaGATGTCACTGGATAAGGAA | + |
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Preference number: 2 (lower is better) Translates to: HCASQSTAKVIYRNHMLLACHGL*MSLDKE Trigger: TTCCTTATCCAGTGACATTCACAGCCCGTGGCATGC...TAAGAGCATGTGGTTTCTATATATGACTTTTGCTGTTGATTGAGAAGCACAATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016406.14 ENSMUST00000155579.8 |
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| 3UTR-3UTR GCA 90 bp | TCCTTTTGGCATTTGGTTCCTGTAAATAATTGTTTTAAGAGACCCAAGTCACCCAAAGATGGCTTTGCATaGCACCTCCCTATGACCCTA | + |
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Preference number: 2 (lower is better) Translates to: SFWHLVPVNNCFKRPKSPKDGFA*HLPMTL Trigger: TAGGGTCATAGGGAGGTGGCATGCAAAGCCATCTTT...GGGTGACTTGGGTCTCTTAAAACAATTATTTACAGGAACCAAATGCCAAAAGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016406.14 ENSMUST00000155579.8 |
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| 3UTR-3UTR GCA 90 bp | AAGCGAGCCCCATTTCTCCAAAATAACGTTCCGCAACCTACAAACCTTTACATTAGGAAAGAAAAATACTaGATCACATCGAAGCAGGCA | + |
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Preference number: 2 (lower is better) Translates to: KRAPFLQNNVPQPTNLYIRKEKY*ITSKQA Trigger: TGCCTGCTTCGATGTGATGCAGTATTTTTCTTTCCT...AATGTAAAGGTTTGTAGGTTGCGGAACGTTATTTTGGAGAAATGGGGCTCGCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000016406.14 ENSMUST00000155579.8 |
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| 3UTR-3UTR TCA 90 bp | TCCTTTTGGCATTTGGTTCCTGTAAATAATTGTTTTAAGAGACCCAAGTCACCCATGTTTTGTGCAATCTaGTCTCCAGGCAATGAGACA | + |
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Preference number: 2 (lower is better) Translates to: SFWHLVPVNNCFKRPKSPMFCAI*SPGNET Trigger: TGTCTCATTGCCTGGAGATCAGATTGCACAAAACAT...GGGTGACTTGGGTCTCTTAAAACAATTATTTACAGGAACCAAATGCCAAAAGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000016406.14 ENSMUST00000155579.8 |
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| 3UTR-3UTR GCA 90 bp | TCCTTTTGGCATTTGGTTCCTGTAAATAATTGTTTTAAGAGACCCAAGTCACCCCGGCGTGGTGTTCACTaGATGATTTTATCTGTTGTA | + |
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Preference number: 2 (lower is better) Translates to: SFWHLVPVNNCFKRPKSPRRGVH*MILSVV Trigger: TACAACAGATAAAATCATGCAGTGAACACCACGCCG...GGGTGACTTGGGTCTCTTAAAACAATTATTTACAGGAACCAAATGCCAAAAGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000016406.14 ENSMUST00000155579.8 |
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| 3UTR-3UTR GCA 90 bp | TCCTTTTGGCATTTGGTTCCTGTAAATAATTGTTTTAAGAGACCCAAGTCACCCGTTAAGTTTCCAAACTaGATGGATCCACCCTGTGTT | + |
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Preference number: 2 (lower is better) Translates to: SFWHLVPVNNCFKRPKSPVKFPN*MDPPCV Trigger: AACACAGGGTGGATCCATGCAGTTTGGAAACTTAAC...GGGTGACTTGGGTCTCTTAAAACAATTATTTACAGGAACCAAATGCCAAAAGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016406.14 ENSMUST00000155579.8 |
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| 3UTR-3UTR CCA 90 bp | ATGACAAGCGAGCCCCATTTCTCCAAAATAACGTTCCGCAACCTACAAACCTTTAACTACCTAATTAACTaGCAAACATGTTGCATTTGG | + |
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Preference number: 2 (lower is better) Translates to: MTSEPHFSKITFRNLQTFNYLIN*QTCCIW Trigger: CCAAATGCAACATGTTTGCCAGTTAATTAGGTAGTT...AAAGGTTTGTAGGTTGCGGAACGTTATTTTGGAGAAATGGGGCTCGCTTGTCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016406.14 ENSMUST00000155579.8 |
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| 3UTR CAA 90 bp | TCTTGGAGAAAGTGGGAGAACTTACCTATTTCTTCCTTTTGGCATTaGGTTCCTGTAAATAATTGTTTTAAGAGACCCAAGTCACCCAGA | + |
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Preference number: 2 (lower is better) Translates to: SWRKWENLPISSFWH*VPVNNCFKRPKSPR Trigger: TCTGGGTGACTTGGGTCTCTTAAAACAATTATTTACAGGAACCAAATGCCAAAAGGAAGAAATAGGTAAGTTCTCCCACTTTCTCCAAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016406.14 ENSMUST00000155579.8 |
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| 3UTR-3UTR GCA 90 bp | TCCTTTTGGCATTTGGTTCCTGTAAATAATTGTTTTAAGAGACCCAAGTCACCCGTTTTGTCAAATCCCTaGTGTAACTCTGATTCATCC | + |
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Preference number: 2 (lower is better) Translates to: SFWHLVPVNNCFKRPKSPVLSNP*CNSDSS Trigger: GGATGAATCAGAGTTACAGCAGGGATTTGACAAAAC...GGGTGACTTGGGTCTCTTAAAACAATTATTTACAGGAACCAAATGCCAAAAGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000016406.14 ENSMUST00000155579.8 |
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| 3UTR CAA 90 bp | GAAAAATACTGCATCACATCGAAGCAGGCACCTCTGCTGGTTATATaGATTTGTTTACCAAGTAACTACCTAATTAACTGGCAAACATGT | + |
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Preference number: 2 (lower is better) Translates to: EKYCITSKQAPLLVI*ICLPSNYLINWQTC Trigger: ACATGTTTGCCAGTTAATTAGGTAGTTACTTGGTAAACAAATCAATATAACCAGCAGAGGTGCCTGCTTCGATGTGATGCAGTATTTTTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000016406.14 ENSMUST00000155579.8 |
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| 3UTR CCA 72 bp | CTGGGAGAGCCCAGACCAAGCAACTGCTCGTTGCCATaGAGAACCAAGGCAGCCTTCTCTGTGCCTGATGGC | + |
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Preference number: 3 (lower is better) Translates to: LGEPRPSNCSLP*RTKAAFSVPDG Trigger: GCCATCAGGCACAGAGAAGGCTGCCTTGGTTCTCCATGGCAACGAGCAGTTGCTTGGTCTGGGCTCTCCCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016406.14 ENSMUST00000155579.8 |
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| 3UTR GCA 72 bp | CAAAGCTGGGAGAGCCCAGACCAAGCAACTGCTCGTTaGCATGGAGAACCAAGGCAGCCTTCTCTGTGCCTG | + |
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Preference number: 3 (lower is better) Translates to: QSWESPDQATAR*HGEPRQPSLCL Trigger: CAGGCACAGAGAAGGCTGCCTTGGTTCTCCATGGCAACGAGCAGTTGCTTGGTCTGGGCTCTCCCAGCTTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016406.14 ENSMUST00000155579.8 |
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| 3UTR-3UTR CAA 90 bp | ACCAAGGCAGCCTTCTCTGTGCCTGATGGCCTTCCCCATTGTCTTCTCCATCTCGCTAGCGCAGGTTCCTaGGAGGGGCAGTGGGAATAT | + |
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Preference number: 3 (lower is better) Translates to: TKAAFSVPDGLPHCLLHLASAGS*EGQWEY Trigger: ATATTCCCACTGCCCCTCCAAGGAACCTGCGCTAGC...GAGATGGAGAAGACAATGGGGAAGGCCATCAGGCACAGAGAAGGCTGCCTTGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016406.14 ENSMUST00000155579.8 |
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| 3UTR GCA 72 bp | CCTCTCTATCATCACCCCATCAGAGGTGGCTCTGTATaGCACCTCTCTAGCCACCCACTACCCATCACAGGC | + |
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Preference number: 3 (lower is better) Translates to: PLYHHPIRGGSV*HLSSHPLPITG Trigger: GCCTGTGATGGGTAGTGGGTGGCTAGAGAGGTGGCATACAGAGCCACCTCTGATGGGGTGATGATAGAGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016406.14 ENSMUST00000155579.8 |
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| 3UTR GCA 72 bp | AACAGCCCAAAGCTGGGAGAGCCCAGACCAAGCAACTaGTCGTTGCCATGGAGAACCAAGGCAGCCTTCTCT | + |
|
Preference number: 3 (lower is better) Translates to: NSPKLGEPRPSN*SLPWRTKAAFS Trigger: AGAGAAGGCTGCCTTGGTTCTCCATGGCAACGAGCAGTTGCTTGGTCTGGGCTCTCCCAGCTTTGGGCTGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016406.14 ENSMUST00000155579.8 |
||
| 3UTR TCA 72 bp | GTTGCCATGGAGAACCAAGGCAGCCTTCTCTGTGCCTaGTGGCCTTCCCCATTGTCTTCTCCATCTCTACCC | + |
|
Preference number: 3 (lower is better) Translates to: VAMENQGSLLCA*WPSPLSSPSLP Trigger: GGGTAGAGATGGAGAAGACAATGGGGAAGGCCATCAGGCACAGAGAAGGCTGCCTTGGTTCTCCATGGCAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016406.14 ENSMUST00000155579.8 |
||
| 3UTR-3UTR CAA 90 bp | AAACAAAACAGCCCAAAGCTGGGAGAGCCCAGACCAAGCAACTGCTCGTTGCCATACTGTACAGATGTTTaGTGCAATCTGATCTCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: KQNSPKLGEPRPSNCSLPYCTDV*CNLISR Trigger: CCTGGAGATCAGATTGCACAAAACATCTGTACAGTA...TGGCAACGAGCAGTTGCTTGGTCTGGGCTCTCCCAGCTTTGGGCTGTTTTGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016406.14 ENSMUST00000155579.8 |
||
| 3UTR-3UTR CAA 90 bp | AAATACTGCATCACATCGAAGCAGGCACCTCTGCTGGTTATATTGATTTGTTTAGCTAGCGCAGGTTCCTaGGAGGGGCAGTGGGAATAT | + |
|
Preference number: 3 (lower is better) Translates to: KYCITSKQAPLLVILICLASAGS*EGQWEY Trigger: ATATTCCCACTGCCCCTCCAAGGAACCTGCGCTAGC...TAAACAAATCAATATAACCAGCAGAGGTGCCTGCTTCGATGTGATGCAGTATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016406.14 ENSMUST00000155579.8 |
||
| 3UTR CCA 72 bp | TTGCATTTGGCTAGCGCAGGTTCCTTGGAGGGGCAGTaGGAATATAACGAGGGCATGTTTTCTTCTATCTAT | + |
|
Preference number: 3 (lower is better) Translates to: LHLASAGSLEGQ*EYNEGMFSSIY Trigger: ATAGATAGAAGAAAACATGCCCTCGTTATATTCCCACTGCCCCTCCAAGGAACCTGCGCTAGCCAAATGCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016406.14 ENSMUST00000155579.8 |
||
| 3UTR CCA 72 bp | AGTAACTACCTAATTAACTGGCAAACATGTTGCATTTaGCTAGCGCAGGTTCCTTGGAGGGGCAGTGGGAAT | + |
|
Preference number: 3 (lower is better) Translates to: SNYLINWQTCCI*LAQVPWRGSGN Trigger: ATTCCCACTGCCCCTCCAAGGAACCTGCGCTAGCCAAATGCAACATGTTTGCCAGTTAATTAGGTAGTTACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016406.14 ENSMUST00000155579.8 |
||
| 3UTR TCA 72 bp | TGTACAGATGTTTTGTGCAATCTGATCTCCAGGCAATaGGACAACCCGGCGTGGTGTTCACTGCATGATTTT | + |
|
Preference number: 3 (lower is better) Translates to: CTDVLCNLISRQ*DNPAWCSLHDF Trigger: AAAATCATGCAGTGAACACCACGCCGGGTTGTCTCATTGCCTGGAGATCAGATTGCACAAAACATCTGTACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016406.14 ENSMUST00000155579.8 |
||
| 3UTR GCA 72 bp | TTACCAAGTAACTACCTAATTAACTGGCAAACATGTTaGATTTGGCTAGCGCAGGTTCCTTGGAGGGGCAGT | + |
|
Preference number: 3 (lower is better) Translates to: LPSNYLINWQTC*IWLAQVPWRGS Trigger: ACTGCCCCTCCAAGGAACCTGCGCTAGCCAAATGCAACATGTTTGCCAGTTAATTAGGTAGTTACTTGGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016406.14 ENSMUST00000155579.8 |
||
| 3UTR GCA 72 bp | CCTGTCTCCAGTCTTTTACTCAGGAAAGAAAAATACTaGATCACATCGAAGCAGGCACCTCTGCTGGTTATA | + |
|
Preference number: 3 (lower is better) Translates to: PVSSLLLRKEKY*ITSKQAPLLVI Trigger: TATAACCAGCAGAGGTGCCTGCTTCGATGTGATGCAGTATTTTTCTTTCCTGAGTAAAAGACTGGAGACAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000016406.14 ENSMUST00000155579.8 |
||
| 3UTR CCA 72 bp | GAACGCGATCGTTCAAAGTTAAGTTTCCAAACTGCATaGATCCACCCTGTGTTTTGTCAAATCCCTGCTGTA | + |
|
Preference number: 3 (lower is better) Translates to: ERDRSKLSFQTA*IHPVFCQIPAV Trigger: TACAGCAGGGATTTGACAAAACACAGGGTGGATCCATGCAGTTTGGAAACTTAACTTTGAACGATCGCGTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016406.14 ENSMUST00000155579.8 |
||
| 3UTR-3UTR CAA 90 bp | TTTACTCAGGAAAGAAAAATACTGCATCACATCGAAGCAGGCACCTCTGCTGGTTACTGTACAGATGTTTaGTGCAATCTGATCTCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: FTQERKILHHIEAGTSAGYCTDV*CNLISR Trigger: CCTGGAGATCAGATTGCACAAAACATCTGTACAGTA...ACCAGCAGAGGTGCCTGCTTCGATGTGATGCAGTATTTTTCTTTCCTGAGTAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000016406.14 ENSMUST00000155579.8 |
||
| 3UTR-3UTR CAA 90 bp | CATTGTGCTTCTCAATCAACAGCAAAAGTCATATATAGAAACCACATGCTCTTACAGGTGCGCTTCATTTaGCCCCAACCTGTCCAGTAC | + |
|
Preference number: 3 (lower is better) Translates to: HCASQSTAKVIYRNHMLLQVRFI*PQPVQY Trigger: GTACTGGACAGGTTGGGGCAAAATGAAGCGCACCTG...TAAGAGCATGTGGTTTCTATATATGACTTTTGCTGTTGATTGAGAAGCACAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016406.14 ENSMUST00000155579.8 |
||
| 3UTR-3UTR CAA 90 bp | ATGACAAGCGAGCCCCATTTCTCCAAAATAACGTTCCGCAACCTACAAACCTTTCGTACTCTATTAACATaGTGCTTCTCAATCAACAGC | + |
|
Preference number: 3 (lower is better) Translates to: MTSEPHFSKITFRNLQTFRTLLT*CFSINS Trigger: GCTGTTGATTGAGAAGCACAATGTTAATAGAGTACG...AAAGGTTTGTAGGTTGCGGAACGTTATTTTGGAGAAATGGGGCTCGCTTGTCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016406.14 ENSMUST00000155579.8 |
||
| 3UTR-3UTR CAA 90 bp | TCCTTTTGGCATTTGGTTCCTGTAAATAATTGTTTTAAGAGACCCAAGTCACCCAAATCCAAGGTATTGTaGAGTAGTGTGTTGGCCAAA | + |
|
Preference number: 3 (lower is better) Translates to: SFWHLVPVNNCFKRPKSPKSKVL*SSVLAK Trigger: TTTGGCCAACACACTACTCAACAATACCTTGGATTT...GGGTGACTTGGGTCTCTTAAAACAATTATTTACAGGAACCAAATGCCAAAAGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016406.14 ENSMUST00000155579.8 |
||
| 3UTR-3UTR CAA 90 bp | TCCTTTTGGCATTTGGTTCCTGTAAATAATTGTTTTAAGAGACCCAAGTCACCCCCTCTGCTGGTTATATaGATTTGTTTACCAAGTAAC | + |
|
Preference number: 3 (lower is better) Translates to: SFWHLVPVNNCFKRPKSPPLLVI*ICLPSN Trigger: GTTACTTGGTAAACAAATCAATATAACCAGCAGAGG...GGGTGACTTGGGTCTCTTAAAACAATTATTTACAGGAACCAAATGCCAAAAGGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000016406.14 ENSMUST00000155579.8 |
||
| CDS-3UTR CCA 90 bp | GAGAGCCCAGACCAAGCAACTGCTCGTTGCCATGGAGAACCAAGGCAGCCTTCTAACTGGAGCTGGCCCTaGGGGGCTCGCACCTCCGTA | + |
|
Preference number: 4 (lower is better) Translates to: ESPDQATARCHGEPRQPSNWSWP*GARTSV Trigger: TACGGAGGTGCGAGCCCCCCAGGGCCAGCTCCAGTT...AGAAGGCTGCCTTGGTTCTCCATGGCAACGAGCAGTTGCTTGGTCTGGGCTCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000016406.14 ENSMUST00000155579.8 |
||
| CDS-3UTR GCA 90 bp | TACAGATGTTTTGTGCAATCTGATCTCCAGGCAATGAGACAACCCGGCGTGGTGACTCTTGGGCGGGGGTaGCACCGAGGGAGCAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: YRCFVQSDLQAMRQPGVVTLGRG*HRGSRQ Trigger: CTGCCTGCTCCCTCGGTGGCACCCCCGCCCAAGAGT...CACCACGCCGGGTTGTCTCATTGCCTGGAGATCAGATTGCACAAAACATCTGTA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000016406.14 ENSMUST00000155579.8 |
||
| CDS-3UTR CCA 90 bp | CCACCCCATCAAAGATGGCTCTGTATGTGCCACCTCTCTATCATCACCCCATCACTGCCAGGTGTGAGCTaGCTCCCCGGTCTCCCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: PPHQRWLCMCHLSIITPSLPGVS*LPGLPE Trigger: CTCAGGGAGACCGGGGAGCCAGCTCACACCTGGCAG...TGATGGGGTGATGATAGAGAGGTGGCACATACAGAGCCATCTTTGATGGGGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000016406.14 ENSMUST00000155579.8 |
||
| 3UTR CAA 72 bp | CCAAAGCTGGGAGAGCCCAGACCAAGCAACTGCTCGTaGCCATGGAGAACCAAGGCAGCCTTCTCTGTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: PKLGEPRPSNCS*PWRTKAAFSVP Trigger: AGGCACAGAGAAGGCTGCCTTGGTTCTCCATGGCAACGAGCAGTTGCTTGGTCTGGGCTCTCCCAGCTTTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016406.14 ENSMUST00000155579.8 |
||
| CDS-3UTR CCA 90 bp | GAGAGCCCAGACCAAGCAACTGCTCGTTGCCATGGAGAACCAAGGCAGCCTTCTTTCCCCACAGGTTCTTaGCCGAGGGCATCACCATCT | + |
|
Preference number: 4 (lower is better) Translates to: ESPDQATARCHGEPRQPSFPTGS*PRASPS Trigger: AGATGGTGATGCCCTCGGCCAAGAACCTGTGGGGAA...AGAAGGCTGCCTTGGTTCTCCATGGCAACGAGCAGTTGCTTGGTCTGGGCTCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016406.14 ENSMUST00000155579.8 |
||
| CDS-3UTR TCA 90 bp | ACCAAGGCAGCCTTCTCTGTGCCTGATGGCCTTCCCCATTGTCTTCTCCATCTCTATGGCTGCAGCTGCTaGGTGGTGGGTGAAGATCCT | + |
|
Preference number: 4 (lower is better) Translates to: TKAAFSVPDGLPHCLLHLYGCSC*VVGEDP Trigger: AGGATCTTCACCCACCACTCAGCAGCTGCAGCCATA...GAGATGGAGAAGACAATGGGGAAGGCCATCAGGCACAGAGAAGGCTGCCTTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016406.14 ENSMUST00000155579.8 |
||
| CDS-3UTR CCA 90 bp | CCACCCCATCAAAGATGGCTCTGTATGTGCCACCTCTCTATCATCACCCCATCAGCTGCAGCTGCTGAGTaGTGGGTGAAGATCCTCGTC | + |
|
Preference number: 4 (lower is better) Translates to: PPHQRWLCMCHLSIITPSAAAAE*WVKILV Trigger: GACGAGGATCTTCACCCACCACTCAGCAGCTGCAGC...TGATGGGGTGATGATAGAGAGGTGGCACATACAGAGCCATCTTTGATGGGGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016406.14 ENSMUST00000155579.8 |
||
| CDS-3UTR CCA 90 bp | TACAGATGTTTTGTGCAATCTGATCTCCAGGCAATGAGACAACCCGGCGTGGTGTTTCCCACTCCTCTTTaGCCACCCGGGGCCGTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: YRCFVQSDLQAMRQPGVVFPTPL*PPGAVS Trigger: GGAAACGGCCCCGGGTGGCCAAAGAGGAGTGGGAAA...CACCACGCCGGGTTGTCTCATTGCCTGGAGATCAGATTGCACAAAACATCTGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016406.14 ENSMUST00000155579.8 |
||
| CDS-3UTR TCA 90 bp | TTTACTCAGGAAAGAAAAATACTGCATCACATCGAAGCAGGCACCTCTGCTGGTGCTCCCCGGTCTCCCTaGGAAGGAACTGGAGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: FTQERKILHHIEAGTSAGAPRSP*EGTGAG Trigger: GCCAGCTCCAGTTCCTTCTCAGGGAGACCGGGGAGC...ACCAGCAGAGGTGCCTGCTTCGATGTGATGCAGTATTTTTCTTTCCTGAGTAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000016406.14 ENSMUST00000155579.8 |
||
| CDS-3UTR TCA 90 bp | CCACCCCATCAAAGATGGCTCTGTATGTGCCACCTCTCTATCATCACCCCATCACTGCTGAGTGGTGGGTaGAGATCCTCGTCTTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: PPHQRWLCMCHLSIITPSLLSGG*RSSSSA Trigger: TGCAGAAGACGAGGATCTTCACCCACCACTCAGCAG...TGATGGGGTGATGATAGAGAGGTGGCACATACAGAGCCATCTTTGATGGGGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016406.14 ENSMUST00000155579.8 |
||
| CDS-3UTR GCA 90 bp | CCACCCCATCAAAGATGGCTCTGTATGTGCCACCTCTCTATCATCACCCCATCAAGGCACCAGCTGTTCTaGATGACAATCTCCCCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: PPHQRWLCMCHLSIITPSRHQLF*MTISPW Trigger: CCACGGGGAGATTGTCATGCAGAACAGCTGGTGCCT...TGATGGGGTGATGATAGAGAGGTGGCACATACAGAGCCATCTTTGATGGGGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000016406.14 ENSMUST00000155579.8 |
||
| CDS-3UTR TCA 90 bp | GAGAGCCCAGACCAAGCAACTGCTCGTTGCCATGGAGAACCAAGGCAGCCTTCTTCTCTGCTGGTTTCGTaGCTTACTTTCCCATCATTG | + |
|
Preference number: 4 (lower is better) Translates to: ESPDQATARCHGEPRQPSSLLVS*LTFPSL Trigger: CAATGATGGGAAAGTAAGTCACGAAACCAGCAGAGA...AGAAGGCTGCCTTGGTTCTCCATGGCAACGAGCAGTTGCTTGGTCTGGGCTCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016406.14 ENSMUST00000155579.8 |
||
| CDS-3UTR CCA 90 bp | ACCAAGGCAGCCTTCTCTGTGCCTGATGGCCTTCCCCATTGTCTTCTCCATCTCCTCCTTCTGAGACAATaGGCTCGCAGAATCTATTCA | + |
|
Preference number: 4 (lower is better) Translates to: TKAAFSVPDGLPHCLLHLLLLRQ*ARRIYS Trigger: TGAATAGATTCTGCGAGCCCATTGTCTCAGAAGGAG...GAGATGGAGAAGACAATGGGGAAGGCCATCAGGCACAGAGAAGGCTGCCTTGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016406.14 ENSMUST00000155579.8 |
||
| CDS-3UTR CCA 90 bp | TACAGATGTTTTGTGCAATCTGATCTCCAGGCAATGAGACAACCCGGCGTGGTGGCCTCCCATAGTGTTTaGTACCCGGCAATCTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: YRCFVQSDLQAMRQPGVVASHSV*YPAISA Trigger: TGCTGAGATTGCCGGGTACCAAACACTATGGGAGGC...CACCACGCCGGGTTGTCTCATTGCCTGGAGATCAGATTGCACAAAACATCTGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016406.14 ENSMUST00000155579.8 |
||
| CDS-3UTR CCA 90 bp | CCACCCCATCAAAGATGGCTCTGTATGTGCCACCTCTCTATCATCACCCCATCATCAAAGTCCACATGGTaGGAGCAACTAGGCAAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: PPHQRWLCMCHLSIITPSSKSTW*EQLGKG Trigger: GCCTTTGCCTAGTTGCTCCCACCATGTGGACTTTGA...TGATGGGGTGATGATAGAGAGGTGGCACATACAGAGCCATCTTTGATGGGGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016406.14 ENSMUST00000155579.8 |
||
| CDS-3UTR CCA 90 bp | ACCAAGGCAGCCTTCTCTGTGCCTGATGGCCTTCCCCATTGTCTTCTCCATCTCCATCACCATCTCTGCTaGTTTCGTGACTTACTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: TKAAFSVPDGLPHCLLHLHHHLC*FRDLLS Trigger: GGAAAGTAAGTCACGAAACCAGCAGAGATGGTGATG...GAGATGGAGAAGACAATGGGGAAGGCCATCAGGCACAGAGAAGGCTGCCTTGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016406.14 ENSMUST00000155579.8 |
||
| CDS-3UTR TCA 90 bp | AAACAAAACAGCCCAAAGCTGGGAGAGCCCAGACCAAGCAACTGCTCGTTGCCATCTCTGCTGGTTTCGTaGCTTACTTTCCCATCATTG | + |
|
Preference number: 4 (lower is better) Translates to: KQNSPKLGEPRPSNCSLPSLLVS*LTFPSL Trigger: CAATGATGGGAAAGTAAGTCACGAAACCAGCAGAGA...TGGCAACGAGCAGTTGCTTGGTCTGGGCTCTCCCAGCTTTGGGCTGTTTTGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016406.14 ENSMUST00000155579.8 |
||
| CDS-3UTR CCA 90 bp | AAATACTGCATCACATCGAAGCAGGCACCTCTGCTGGTTATATTGATTTGTTTACTGCCAGGTGTGAGCTaGCTCCCCGGTCTCCCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: KYCITSKQAPLLVILICLLPGVS*LPGLPE Trigger: CTCAGGGAGACCGGGGAGCCAGCTCACACCTGGCAG...TAAACAAATCAATATAACCAGCAGAGGTGCCTGCTTCGATGTGATGCAGTATTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016406.14 ENSMUST00000155579.8 |
||
| CDS-3UTR CCA 90 bp | TACAGATGTTTTGTGCAATCTGATCTCCAGGCAATGAGACAACCCGGCGTGGTGTCAAAGTCCACATGGTaGGAGCAACTAGGCAAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: YRCFVQSDLQAMRQPGVVSKSTW*EQLGKG Trigger: GCCTTTGCCTAGTTGCTCCCACCATGTGGACTTTGA...CACCACGCCGGGTTGTCTCATTGCCTGGAGATCAGATTGCACAAAACATCTGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016406.14 ENSMUST00000155579.8 |
||
| CDS-3UTR CCA 90 bp | ACCAAGGCAGCCTTCTCTGTGCCTGATGGCCTTCCCCATTGTCTTCTCCATCTCAATTTGACCTTTTCCTaGACACCAAGCGACCTAATG | + |
|
Preference number: 4 (lower is better) Translates to: TKAAFSVPDGLPHCLLHLNLTFS*TPSDLM Trigger: CATTAGGTCGCTTGGTGTCCAGGAAAAGGTCAAATT...GAGATGGAGAAGACAATGGGGAAGGCCATCAGGCACAGAGAAGGCTGCCTTGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016406.14 ENSMUST00000155579.8 |
||
| 3UTR CAA 72 bp | GATCCTAGATTGCTGTCTTGCCAGGTGCGCTTCATTTaGCCCCAACCTGTCCAGTACAAACATGACACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: DPRLLSCQVRFI*PQPVQYKHDTA Trigger: AGCTGTGTCATGTTTGTACTGGACAGGTTGGGGCAAAATGAAGCGCACCTGGCAAGACAGCAATCTAGGATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016406.14 ENSMUST00000155579.8 |
||
| CDS-3UTR TCA 90 bp | AAGCGAGCCCCATTTCTCCAAAATAACGTTCCGCAACCTACAAACCTTTACATTCTGCTGAGTGGTGGGTaGAGATCCTCGTCTTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: KRAPFLQNNVPQPTNLYILLSGG*RSSSSA Trigger: TGCAGAAGACGAGGATCTTCACCCACCACTCAGCAG...AATGTAAAGGTTTGTAGGTTGCGGAACGTTATTTTGGAGAAATGGGGCTCGCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016406.14 ENSMUST00000155579.8 |
||
| CDS-3UTR TCA 90 bp | TACAGATGTTTTGTGCAATCTGATCTCCAGGCAATGAGACAACCCGGCGTGGTGTTCCAACACTTGTATTaGCAGAGAGGGGTAGGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: YRCFVQSDLQAMRQPGVVFQHLY*QRGVGS Trigger: TGAACCTACCCCTCTCTGTCAATACAAGTGTTGGAA...CACCACGCCGGGTTGTCTCATTGCCTGGAGATCAGATTGCACAAAACATCTGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016406.14 ENSMUST00000155579.8 |
||
| CDS-3UTR GCA 90 bp | CCACCCCATCAAAGATGGCTCTGTATGTGCCACCTCTCTATCATCACCCCATCACGTAAAATTGGCCTTTaGACTCAAAATCAAGGTCGT | + |
|
Preference number: 4 (lower is better) Translates to: PPHQRWLCMCHLSIITPSRKIGL*TQNQGR Trigger: ACGACCTTGATTTTGAGTGCAAAGGCCAATTTTACG...TGATGGGGTGATGATAGAGAGGTGGCACATACAGAGCCATCTTTGATGGGGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000016406.14 ENSMUST00000155579.8 |
||
| CDS-3UTR TCA 90 bp | TCCTTTTGGCATTTGGTTCCTGTAAATAATTGTTTTAAGAGACCCAAGTCACCCCTCAGCAGCTCCTTCTaGGACAATGGGCTCGCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: SFWHLVPVNNCFKRPKSPLSSSF*DNGLAE Trigger: TTCTGCGAGCCCATTGTCTCAGAAGGAGCTGCTGAG...GGGTGACTTGGGTCTCTTAAAACAATTATTTACAGGAACCAAATGCCAAAAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000016406.14 ENSMUST00000155579.8 |
||
| CDS-3UTR GCA 90 bp | TACAGATGTTTTGTGCAATCTGATCTCCAGGCAATGAGACAACCCGGCGTGGTGAAGATCCTCGTCTTCTaGATACTTCCTCTTGAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: YRCFVQSDLQAMRQPGVVKILVF*ILPLEV Trigger: TACTTCAAGAGGAAGTATGCAGAAGACGAGGATCTT...CACCACGCCGGGTTGTCTCATTGCCTGGAGATCAGATTGCACAAAACATCTGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016406.14 ENSMUST00000155579.8 |
||
| CDS-3UTR GCA 90 bp | AAGCGAGCCCCATTTCTCCAAAATAACGTTCCGCAACCTACAAACCTTTACATTTGTTGCAGCACAGTTTaGTGCTCGGAGAAAGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: KRAPFLQNNVPQPTNLYICCSTV*CSEKAP Trigger: AGGAGCTTTCTCCGAGCAGCAAACTGTGCTGCAACA...AATGTAAAGGTTTGTAGGTTGCGGAACGTTATTTTGGAGAAATGGGGCTCGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016406.14 ENSMUST00000155579.8 |
||
| CDS-3UTR GCA 90 bp | AAGCGAGCCCCATTTCTCCAAAATAACGTTCCGCAACCTACAAACCTTTACATTTTTTACCCCCTCTGTTaGAGCACAGTTTGCTGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: KRAPFLQNNVPQPTNLYIFYPLC*STVCCS Trigger: CGAGCAGCAAACTGTGCTGCAACAGAGGGGGTAAAA...AATGTAAAGGTTTGTAGGTTGCGGAACGTTATTTTGGAGAAATGGGGCTCGCTT 46% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt. Matches the following 2 transcripts: ENSMUST00000016406.14 ENSMUST00000155579.8 |
||
| CDS-3UTR CCA 90 bp | AAATACTGCATCACATCGAAGCAGGCACCTCTGCTGGTTATATTGATTTGTTTAGCAGCTGCTGAGTGGTaGGTGAAGATCCTCGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: KYCITSKQAPLLVILICLAAAEW*VKILVF Trigger: GAAGACGAGGATCTTCACCCACCACTCAGCAGCTGC...TAAACAAATCAATATAACCAGCAGAGGTGCCTGCTTCGATGTGATGCAGTATTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016406.14 ENSMUST00000155579.8 |
||
| CDS-3UTR CCA 90 bp | ATGACAAGCGAGCCCCATTTCTCCAAAATAACGTTCCGCAACCTACAAACCTTTATGGAGATGGTTTTATaGCTGCAGCTGCTGAGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: MTSEPHFSKITFRNLQTFMEMVL*LQLLSG Trigger: ACCACTCAGCAGCTGCAGCCATAAAACCATCTCCAT...AAAGGTTTGTAGGTTGCGGAACGTTATTTTGGAGAAATGGGGCTCGCTTGTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000016406.14 ENSMUST00000155579.8 |
||
| CDS-3UTR CCA 90 bp | TTTACTCAGGAAAGAAAAATACTGCATCACATCGAAGCAGGCACCTCTGCTGGTCCTCGAAAATGGAGATaGTTTTATGGCTGCAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: FTQERKILHHIEAGTSAGPRKWR*FYGCSC Trigger: GCAGCTGCAGCCATAAAACCATCTCCATTTTCGAGG...ACCAGCAGAGGTGCCTGCTTCGATGTGATGCAGTATTTTTCTTTCCTGAGTAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000016406.14 ENSMUST00000155579.8 |
||
| CDS-3UTR CCA 90 bp | CATTGTGCTTCTCAATCAACAGCAAAAGTCATATATAGAAACCACATGCTCTTATTTCCCACTCCTCTTTaGCCACCCGGGGCCGTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: HCASQSTAKVIYRNHMLLFPTPL*PPGAVS Trigger: GGAAACGGCCCCGGGTGGCCAAAGAGGAGTGGGAAA...TAAGAGCATGTGGTTTCTATATATGACTTTTGCTGTTGATTGAGAAGCACAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016406.14 ENSMUST00000155579.8 |
||
| CDS-3UTR CCA 90 bp | TCCTTTTGGCATTTGGTTCCTGTAAATAATTGTTTTAAGAGACCCAAGTCACCCTTCCCCACAGGTTCTTaGCCGAGGGCATCACCATCT | + |
|
Preference number: 4 (lower is better) Translates to: SFWHLVPVNNCFKRPKSPFPTGS*PRASPS Trigger: AGATGGTGATGCCCTCGGCCAAGAACCTGTGGGGAA...GGGTGACTTGGGTCTCTTAAAACAATTATTTACAGGAACCAAATGCCAAAAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000016406.14 ENSMUST00000155579.8 |
||
| CDS-3UTR CCA 90 bp | AAATACTGCATCACATCGAAGCAGGCACCTCTGCTGGTTATATTGATTTGTTTAGCCTCCCATAGTGTTTaGTACCCGGCAATCTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: KYCITSKQAPLLVILICLASHSV*YPAISA Trigger: TGCTGAGATTGCCGGGTACCAAACACTATGGGAGGC...TAAACAAATCAATATAACCAGCAGAGGTGCCTGCTTCGATGTGATGCAGTATTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016406.14 ENSMUST00000155579.8 |
||
| CDS-3UTR TCA 90 bp | AAGCGAGCCCCATTTCTCCAAAATAACGTTCCGCAACCTACAAACCTTTACATTTTCCAACACTTGTATTaGCAGAGAGGGGTAGGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: KRAPFLQNNVPQPTNLYIFQHLY*QRGVGS Trigger: TGAACCTACCCCTCTCTGTCAATACAAGTGTTGGAA...AATGTAAAGGTTTGTAGGTTGCGGAACGTTATTTTGGAGAAATGGGGCTCGCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000016406.14 ENSMUST00000155579.8 |
||
| CDS-3UTR GCA 90 bp | CATTGTGCTTCTCAATCAACAGCAAAAGTCATATATAGAAACCACATGCTCTTAAGGCACCAGCTGTTCTaGATGACAATCTCCCCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: HCASQSTAKVIYRNHMLLRHQLF*MTISPW Trigger: CCACGGGGAGATTGTCATGCAGAACAGCTGGTGCCT...TAAGAGCATGTGGTTTCTATATATGACTTTTGCTGTTGATTGAGAAGCACAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016406.14 ENSMUST00000155579.8 |
||
| CDS-3UTR GCA 90 bp | TCCTTTTGGCATTTGGTTCCTGTAAATAATTGTTTTAAGAGACCCAAGTCACCCTGTTGCAGCACAGTTTaGTGCTCGGAGAAAGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SFWHLVPVNNCFKRPKSPCCSTV*CSEKAP Trigger: AGGAGCTTTCTCCGAGCAGCAAACTGTGCTGCAACA...GGGTGACTTGGGTCTCTTAAAACAATTATTTACAGGAACCAAATGCCAAAAGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016406.14 ENSMUST00000155579.8 |
||
| CDS-3UTR GCA 90 bp | TCCTTTTGGCATTTGGTTCCTGTAAATAATTGTTTTAAGAGACCCAAGTCACCCTTTTACCCCCTCTGTTaGAGCACAGTTTGCTGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: SFWHLVPVNNCFKRPKSPFYPLC*STVCCS Trigger: CGAGCAGCAAACTGTGCTGCAACAGAGGGGGTAAAA...GGGTGACTTGGGTCTCTTAAAACAATTATTTACAGGAACCAAATGCCAAAAGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000016406.14 ENSMUST00000155579.8 |
||
| CDS-3UTR CCA 90 bp | CATTGTGCTTCTCAATCAACAGCAAAAGTCATATATAGAAACCACATGCTCTTAGCAGCTGCTGAGTGGTaGGTGAAGATCCTCGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: HCASQSTAKVIYRNHMLLAAAEW*VKILVF Trigger: GAAGACGAGGATCTTCACCCACCACTCAGCAGCTGC...TAAGAGCATGTGGTTTCTATATATGACTTTTGCTGTTGATTGAGAAGCACAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016406.14 ENSMUST00000155579.8 |
||
| CDS-3UTR CCA 90 bp | ATGACAAGCGAGCCCCATTTCTCCAAAATAACGTTCCGCAACCTACAAACCTTTAATTTGACCTTTTCCTaGACACCAAGCGACCTAATG | + |
|
Preference number: 4 (lower is better) Translates to: MTSEPHFSKITFRNLQTFNLTFS*TPSDLM Trigger: CATTAGGTCGCTTGGTGTCCAGGAAAAGGTCAAATT...AAAGGTTTGTAGGTTGCGGAACGTTATTTTGGAGAAATGGGGCTCGCTTGTCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000016406.14 ENSMUST00000155579.8 |
||
| CDS-3UTR CCA 90 bp | TCCTTTTGGCATTTGGTTCCTGTAAATAATTGTTTTAAGAGACCCAAGTCACCCATGGAGATGGTTTTATaGCTGCAGCTGCTGAGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: SFWHLVPVNNCFKRPKSPMEMVL*LQLLSG Trigger: ACCACTCAGCAGCTGCAGCCATAAAACCATCTCCAT...GGGTGACTTGGGTCTCTTAAAACAATTATTTACAGGAACCAAATGCCAAAAGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000016406.14 ENSMUST00000155579.8 |
||
| CDS-3UTR CCA 90 bp | TCCTTTTGGCATTTGGTTCCTGTAAATAATTGTTTTAAGAGACCCAAGTCACCCCTCCTTCTGAGACAATaGGCTCGCAGAATCTATTCA | + |
|
Preference number: 4 (lower is better) Translates to: SFWHLVPVNNCFKRPKSPLLLRQ*ARRIYS Trigger: TGAATAGATTCTGCGAGCCCATTGTCTCAGAAGGAG...GGGTGACTTGGGTCTCTTAAAACAATTATTTACAGGAACCAAATGCCAAAAGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000016406.14 ENSMUST00000155579.8 |
||
| CDS-3UTR CCA 90 bp | TCCTTTTGGCATTTGGTTCCTGTAAATAATTGTTTTAAGAGACCCAAGTCACCCCATCACCATCTCTGCTaGTTTCGTGACTTACTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SFWHLVPVNNCFKRPKSPHHHLC*FRDLLS Trigger: GGAAAGTAAGTCACGAAACCAGCAGAGATGGTGATG...GGGTGACTTGGGTCTCTTAAAACAATTATTTACAGGAACCAAATGCCAAAAGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000016406.14 ENSMUST00000155579.8 |
||
| CDS-3UTR GCA 90 bp | TCCTTTTGGCATTTGGTTCCTGTAAATAATTGTTTTAAGAGACCCAAGTCACCCAAGATCCTCGTCTTCTaGATACTTCCTCTTGAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: SFWHLVPVNNCFKRPKSPKILVF*ILPLEV Trigger: TACTTCAAGAGGAAGTATGCAGAAGACGAGGATCTT...GGGTGACTTGGGTCTCTTAAAACAATTATTTACAGGAACCAAATGCCAAAAGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016406.14 ENSMUST00000155579.8 |
||
| CDS-3UTR GCA 90 bp | CATTGTGCTTCTCAATCAACAGCAAAAGTCATATATAGAAACCACATGCTCTTACGTAAAATTGGCCTTTaGACTCAAAATCAAGGTCGT | + |
|
Preference number: 4 (lower is better) Translates to: HCASQSTAKVIYRNHMLLRKIGL*TQNQGR Trigger: ACGACCTTGATTTTGAGTGCAAAGGCCAATTTTACG...TAAGAGCATGTGGTTTCTATATATGACTTTTGCTGTTGATTGAGAAGCACAATG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000016406.14 ENSMUST00000155579.8 |
||
| 3UTR CAA 72 bp | AAGTGGGAGAACTTACCTATTTCTTCCTTTTGGCATTaGGTTCCTGTAAATAATTGTTTTAAGAGACCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: KWENLPISSFWH*VPVNNCFKRPK Trigger: CTTGGGTCTCTTAAAACAATTATTTACAGGAACCAAATGCCAAAAGGAAGAAATAGGTAAGTTCTCCCACTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016406.14 ENSMUST00000155579.8 |
||
| CDS-3UTR CAA 90 bp | ACCAAGGCAGCCTTCTCTGTGCCTGATGGCCTTCCCCATTGTCTTCTCCATCTCCTGTTGCAGCACAGTTaGCTGCTCGGAGAAAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: TKAAFSVPDGLPHCLLHLLLQHS*LLGESS Trigger: GGAGCTTTCTCCGAGCAGCAAACTGTGCTGCAACAG...GAGATGGAGAAGACAATGGGGAAGGCCATCAGGCACAGAGAAGGCTGCCTTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016406.14 ENSMUST00000155579.8 |
||
| CDS-3UTR CAA 90 bp | GAGAGCCCAGACCAAGCAACTGCTCGTTGCCATGGAGAACCAAGGCAGCCTTCTTCTGCATACTTCCTCTaGAAGTATGTGACCTTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: ESPDQATARCHGEPRQPSSAYFL*KYVTLG Trigger: ACCCAAGGTCACATACTTCAAGAGGAAGTATGCAGA...AGAAGGCTGCCTTGGTTCTCCATGGCAACGAGCAGTTGCTTGGTCTGGGCTCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016406.14 ENSMUST00000155579.8 |
||
| CDS-3UTR CAA 90 bp | AAACAAAACAGCCCAAAGCTGGGAGAGCCCAGACCAAGCAACTGCTCGTTGCCATTCGCTGGCGGGTATTaGGCTCTTGTAAATAGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: KQNSPKLGEPRPSNCSLPFAGGY*ALVNRC Trigger: GCACCTATTTACAAGAGCCAAATACCCGCCAGCGAA...TGGCAACGAGCAGTTGCTTGGTCTGGGCTCTCCCAGCTTTGGGCTGTTTTGTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016406.14 ENSMUST00000155579.8 |
||
| CDS-3UTR CAA 90 bp | TTTACTCAGGAAAGAAAAATACTGCATCACATCGAAGCAGGCACCTCTGCTGGTTTTTCCCACTCCTCTTaGGCCACCCGGGGCCGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: FTQERKILHHIEAGTSAGFSHSS*ATRGRF Trigger: GAAACGGCCCCGGGTGGCCAAAGAGGAGTGGGAAAA...ACCAGCAGAGGTGCCTGCTTCGATGTGATGCAGTATTTTTCTTTCCTGAGTAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000016406.14 ENSMUST00000155579.8 |
||
| CDS TCA 90 bp | CCCACAGGTTCTTGGCCGAGGGCATCACCATCTCTGCTGGTTTCGTaGCTTACTTTCCCATCATTGTTGAATTTGACCTTTTCCTGGACA | + |
|
Preference number: 5 (lower is better) Translates to: PTGSWPRASPSLLVS*LTFPSLLNLTFSWT Trigger: TGTCCAGGAAAAGGTCAAATTCAACAATGATGGGAAAGTAAGTCACGAAACCAGCAGAGATGGTGATGCCCTCGGCCAAGAACCTGTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016406.14 ENSMUST00000155579.8 |
||
| CDS GCA 90 bp | TTTATGGCTGCAGCTGCTGAGTGGTGGGTGAAGATCCTCGTCTTCTaGATACTTCCTCTTGAAGTATGTGACCTTGGGTGTGCTTATAGG | + |
|
Preference number: 5 (lower is better) Translates to: FMAAAAEWWVKILVF*ILPLEVCDLGCAYR Trigger: CCTATAAGCACACCCAAGGTCACATACTTCAAGAGGAAGTATGCAGAAGACGAGGATCTTCACCCACCACTCAGCAGCTGCAGCCATAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016406.14 ENSMUST00000155503.3 ENSMUST00000155579.8 |
||
| CDS GCA 90 bp | GTCATCGATGAACCTGAGCTTCTCCAAGGACATGTAAAGGATGTGTaGTCGCTCCTCGAAAATGGAGATGGTTTTATGGCTGCAGCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: VIDEPELLQGHVKDV*SLLENGDGFMAAAA Trigger: AGCAGCTGCAGCCATAAAACCATCTCCATTTTCGAGGAGCGAGCACACATCCTTTACATGTCCTTGGAGAAGCTCAGGTTCATCGATGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016406.14 ENSMUST00000155503.3 ENSMUST00000155579.8 |
||
| CDS CCA 90 bp | TCGCTCCTCGAAAATGGAGATGGTTTTATGGCTGCAGCTGCTGAGTaGTGGGTGAAGATCCTCGTCTTCTGCATACTTCCTCTTGAAGTA | + |
|
Preference number: 5 (lower is better) Translates to: SLLENGDGFMAAAAE*WVKILVFCILPLEV Trigger: TACTTCAAGAGGAAGTATGCAGAAGACGAGGATCTTCACCCACCACTCAGCAGCTGCAGCCATAAAACCATCTCCATTTTCGAGGAGCGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016406.14 ENSMUST00000155503.3 ENSMUST00000155579.8 |
||
| CDS-3UTR CAA 90 bp | AAACAAAACAGCCCAAAGCTGGGAGAGCCCAGACCAAGCAACTGCTCGTTGCCAATCCTCTTCATCAGGTaGTTGATCAGAACAGACCTT | + |
|
Preference number: 5 (lower is better) Translates to: KQNSPKLGEPRPSNCSLPILFIR*LIRTDL Trigger: AAGGTCTGTTCTGATCAACAACCTGATGAAGAGGAT...TGGCAACGAGCAGTTGCTTGGTCTGGGCTCTCCCAGCTTTGGGCTGTTTTGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016406.14 ENSMUST00000155579.8 |
||
| CDS-3UTR CAA 90 bp | TTTACTCAGGAAAGAAAAATACTGCATCACATCGAAGCAGGCACCTCTGCTGGTCTGTTGCAGCACAGTTaGCTGCTCGGAGAAAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: FTQERKILHHIEAGTSAGLLQHS*LLGESS Trigger: GGAGCTTTCTCCGAGCAGCAAACTGTGCTGCAACAG...ACCAGCAGAGGTGCCTGCTTCGATGTGATGCAGTATTTTTCTTTCCTGAGTAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000016406.14 ENSMUST00000155579.8 |
||
| CDS TCA 90 bp | TCGAAAATGGAGATGGTTTTATGGCTGCAGCTGCTGAGTGGTGGGTaGAGATCCTCGTCTTCTGCATACTTCCTCTTGAAGTATGTGACC | + |
|
Preference number: 5 (lower is better) Translates to: SKMEMVLWLQLLSGG*RSSSSAYFLLKYVT Trigger: GGTCACATACTTCAAGAGGAAGTATGCAGAAGACGAGGATCTTCACCCACCACTCAGCAGCTGCAGCCATAAAACCATCTCCATTTTCGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016406.14 ENSMUST00000155503.3 ENSMUST00000155579.8 |
||
| CDS GCA 90 bp | AGTGACAAAGATTTCGCTGGCGGGTATTTGGCTCTTGTAAATAGGTaGACTGCCTATGTCAAAGTCCACATGGTGGGAGCAACTAGGCAA | + |
|
Preference number: 5 (lower is better) Translates to: SDKDFAGGYLALVNR*TAYVKVHMVGATRQ Trigger: TTGCCTAGTTGCTCCCACCATGTGGACTTTGACATAGGCAGTGCACCTATTTACAAGAGCCAAATACCCGCCAGCGAAATCTTTGTCACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016406.14 ENSMUST00000155579.8 |
||
| CDS CCA 90 bp | CTCCTCGAAAATGGAGATGGTTTTATGGCTGCAGCTGCTGAGTGGTaGGTGAAGATCCTCGTCTTCTGCATACTTCCTCTTGAAGTATGT | + |
|
Preference number: 5 (lower is better) Translates to: LLENGDGFMAAAAEW*VKILVFCILPLEVC Trigger: ACATACTTCAAGAGGAAGTATGCAGAAGACGAGGATCTTCACCCACCACTCAGCAGCTGCAGCCATAAAACCATCTCCATTTTCGAGGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016406.14 ENSMUST00000155503.3 ENSMUST00000155579.8 |
||
| CDS-3UTR CAA 90 bp | TACAGATGTTTTGTGCAATCTGATCTCCAGGCAATGAGACAACCCGGCGTGGTGTCTGCATACTTCCTCTaGAAGTATGTGACCTTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: YRCFVQSDLQAMRQPGVVSAYFL*KYVTLG Trigger: ACCCAAGGTCACATACTTCAAGAGGAAGTATGCAGA...CACCACGCCGGGTTGTCTCATTGCCTGGAGATCAGATTGCACAAAACATCTGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016406.14 ENSMUST00000155579.8 |
||
| CDS-3UTR CAA 90 bp | AAATACTGCATCACATCGAAGCAGGCACCTCTGCTGGTTATATTGATTTGTTTACCGGTAAGGACAGTCTaGAGCCAGGAACCACTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: KYCITSKQAPLLVILICLPVRTV*SQEPLL Trigger: CAAGAGTGGTTCCTGGCTCAAGACTGTCCTTACCGG...TAAACAAATCAATATAACCAGCAGAGGTGCCTGCTTCGATGTGATGCAGTATTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016406.14 ENSMUST00000155579.8 |
||
| CDS-3UTR CAA 90 bp | TCCTTTTGGCATTTGGTTCCTGTAAATAATTGTTTTAAGAGACCCAAGTCACCCCCGGTAAGGACAGTCTaGAGCCAGGAACCACTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: SFWHLVPVNNCFKRPKSPPVRTV*SQEPLL Trigger: CAAGAGTGGTTCCTGGCTCAAGACTGTCCTTACCGG...GGGTGACTTGGGTCTCTTAAAACAATTATTTACAGGAACCAAATGCCAAAAGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000016406.14 ENSMUST00000155579.8 |
||
| CDS-3UTR CAA 90 bp | CATTGTGCTTCTCAATCAACAGCAAAAGTCATATATAGAAACCACATGCTCTTATTTTCCCACTCCTCTTaGGCCACCCGGGGCCGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: HCASQSTAKVIYRNHMLLFSHSS*ATRGRF Trigger: GAAACGGCCCCGGGTGGCCAAAGAGGAGTGGGAAAA...TAAGAGCATGTGGTTTCTATATATGACTTTTGCTGTTGATTGAGAAGCACAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000016406.14 ENSMUST00000155579.8 |
||
| CDS-3UTR CAA 90 bp | ATGACAAGCGAGCCCCATTTCTCCAAAATAACGTTCCGCAACCTACAAACCTTTCCATCATTGTTGAATTaGACCTTTTCCTGGACACCA | + |
|
Preference number: 5 (lower is better) Translates to: MTSEPHFSKITFRNLQTFPSLLN*TFSWTP Trigger: TGGTGTCCAGGAAAAGGTCAAATTCAACAATGATGG...AAAGGTTTGTAGGTTGCGGAACGTTATTTTGGAGAAATGGGGCTCGCTTGTCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000016406.14 ENSMUST00000155579.8 |
||
| CDS-3UTR CAA 90 bp | TTTACTCAGGAAAGAAAAATACTGCATCACATCGAAGCAGGCACCTCTGCTGGTTTGAAGTATGTGACCTaGGGTGTGCTTATAGGATTT | + |
|
Preference number: 5 (lower is better) Translates to: FTQERKILHHIEAGTSAGLKYVT*GVLIGF Trigger: AAATCCTATAAGCACACCCAAGGTCACATACTTCAA...ACCAGCAGAGGTGCCTGCTTCGATGTGATGCAGTATTTTTCTTTCCTGAGTAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000016406.14 ENSMUST00000155579.8 |
||
| CDS-3UTR CAA 90 bp | AAGCGAGCCCCATTTCTCCAAAATAACGTTCCGCAACCTACAAACCTTTACATTTTGAAGTATGTGACCTaGGGTGTGCTTATAGGATTT | + |
|
Preference number: 5 (lower is better) Translates to: KRAPFLQNNVPQPTNLYILKYVT*GVLIGF Trigger: AAATCCTATAAGCACACCCAAGGTCACATACTTCAA...AATGTAAAGGTTTGTAGGTTGCGGAACGTTATTTTGGAGAAATGGGGCTCGCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000016406.14 ENSMUST00000155579.8 |
||
| CDS-3UTR CAA 90 bp | CATTGTGCTTCTCAATCAACAGCAAAAGTCATATATAGAAACCACATGCTCTTATTCGCTGGCGGGTATTaGGCTCTTGTAAATAGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: HCASQSTAKVIYRNHMLLFAGGY*ALVNRC Trigger: GCACCTATTTACAAGAGCCAAATACCCGCCAGCGAA...TAAGAGCATGTGGTTTCTATATATGACTTTTGCTGTTGATTGAGAAGCACAATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016406.14 ENSMUST00000155579.8 |
||
| CDS-3UTR CAA 90 bp | AAGCGAGCCCCATTTCTCCAAAATAACGTTCCGCAACCTACAAACCTTTACATTACTTTCCCATCATTGTaGAATTTGACCTTTTCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: KRAPFLQNNVPQPTNLYITFPSL*NLTFSW Trigger: CCAGGAAAAGGTCAAATTCAACAATGATGGGAAAGT...AATGTAAAGGTTTGTAGGTTGCGGAACGTTATTTTGGAGAAATGGGGCTCGCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000016406.14 ENSMUST00000155579.8 |
||
| CDS-3UTR CAA 90 bp | CATTGTGCTTCTCAATCAACAGCAAAAGTCATATATAGAAACCACATGCTCTTACTCTTCATCAGGTTGTaGATCAGAACAGACCTTCGC | + |
|
Preference number: 5 (lower is better) Translates to: HCASQSTAKVIYRNHMLLLFIRL*IRTDLR Trigger: GCGAAGGTCTGTTCTGATCAACAACCTGATGAAGAG...TAAGAGCATGTGGTTTCTATATATGACTTTTGCTGTTGATTGAGAAGCACAATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016406.14 ENSMUST00000155579.8 |
||
| CDS-3UTR CAA 90 bp | AAATACTGCATCACATCGAAGCAGGCACCTCTGCTGGTTATATTGATTTGTTTAATCCTCTTCATCAGGTaGTTGATCAGAACAGACCTT | + |
|
Preference number: 5 (lower is better) Translates to: KYCITSKQAPLLVILICLILFIR*LIRTDL Trigger: AAGGTCTGTTCTGATCAACAACCTGATGAAGAGGAT...TAAACAAATCAATATAACCAGCAGAGGTGCCTGCTTCGATGTGATGCAGTATTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016406.14 ENSMUST00000155579.8 |
||
| CDS-3UTR CAA 90 bp | AAATACTGCATCACATCGAAGCAGGCACCTCTGCTGGTTATATTGATTTGTTTAACTTTCCCATCATTGTaGAATTTGACCTTTTCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: KYCITSKQAPLLVILICLTFPSL*NLTFSW Trigger: CCAGGAAAAGGTCAAATTCAACAATGATGGGAAAGT...TAAACAAATCAATATAACCAGCAGAGGTGCCTGCTTCGATGTGATGCAGTATTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016406.14 ENSMUST00000155579.8 |
||
| CDS CAA 90 bp | CCGGGGCCGTTTCCGGTAAGGACAGTCTTGAGCCAGGAACCACTCTaGGGCGGGGGTGCCACCGAGGGAGCAGGCAGGGAGGCACCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: PGPFPVRTVLSQEPL*GGGATEGAGREAPA Trigger: AGCTGGTGCCTCCCTGCCTGCTCCCTCGGTGGCACCCCCGCCCAAGAGTGGTTCCTGGCTCAAGACTGTCCTTACCGGAAACGGCCCCGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000016406.14 ENSMUST00000155579.8 |
||
| CDS CAA 90 bp | CCACTCCTCTTTGGCCACCCGGGGCCGTTTCCGGTAAGGACAGTCTaGAGCCAGGAACCACTCTTGGGCGGGGGTGCCACCGAGGGAGCA | + |
|
Preference number: 6 (lower is better) Translates to: PLLFGHPGPFPVRTV*SQEPLLGGGATEGA Trigger: TGCTCCCTCGGTGGCACCCCCGCCCAAGAGTGGTTCCTGGCTCAAGACTGTCCTTACCGGAAACGGCCCCGGGTGGCCAAAGAGGAGTGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000016406.14 ENSMUST00000155579.8 |
||
| CDS CAA 72 bp | TTTCCGGTAAGGACAGTCTTGAGCCAGGAACCACTCTaGGGCGGGGGTGCCACCGAGGGAGCAGGCAGGGAG | + |
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Preference number: 6 (lower is better) Translates to: FPVRTVLSQEPL*GGGATEGAGRE Trigger: CTCCCTGCCTGCTCCCTCGGTGGCACCCCCGCCCAAGAGTGGTTCCTGGCTCAAGACTGTCCTTACCGGAAA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000016406.14 ENSMUST00000155579.8 |
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| CDS CCA 72 bp | GGGAGGCACCAGCTGTTCTGCATGACAATCTCCCCGTaGATCCTCTTCATCAGGTTGTTGATCAGAACAGAC | + |
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Preference number: 6 (lower is better) Translates to: GRHQLFCMTISP*ILFIRLLIRTD Trigger: GTCTGTTCTGATCAACAACCTGATGAAGAGGATCCACGGGGAGATTGTCATGCAGAACAGCTGGTGCCTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016406.14 ENSMUST00000155579.8 |
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| CDS CAA 72 bp | TTTGCACTCAAAATCAAGGTCGTTCCCCACAGGTTCTaGGCCGAGGGCATCACCATCTCTGCTGGTTTCGTG | + |
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Preference number: 6 (lower is better) Translates to: FALKIKVVPHRF*AEGITISAGFV Trigger: CACGAAACCAGCAGAGATGGTGATGCCCTCGGCCAAGAACCTGTGGGGAACGACCTTGATTTTGAGTGCAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016406.14 ENSMUST00000155579.8 |
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| CDS CAA 90 bp | CAGCTGTTCTGCATGACAATCTCCCCGTGGATCCTCTTCATCAGGTaGTTGATCAGAACAGACCTTCGCAGGTACACTTCTGGGTCATCG | + |
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Preference number: 6 (lower is better) Translates to: QLFCMTISPWILFIR*LIRTDLRRYTSGSS Trigger: CGATGACCCAGAAGTGTACCTGCGAAGGTCTGTTCTGATCAACAACCTGATGAAGAGGATCCACGGGGAGATTGTCATGCAGAACAGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016406.14 ENSMUST00000155579.8 |
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| CDS GCA 72 bp | GCAGCTGCTGAGTGGTGGGTGAAGATCCTCGTCTTCTaGATACTTCCTCTTGAAGTATGTGACCTTGGGTGT | + |
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Preference number: 6 (lower is better) Translates to: AAAEWWVKILVF*ILPLEVCDLGC Trigger: ACACCCAAGGTCACATACTTCAAGAGGAAGTATGCAGAAGACGAGGATCTTCACCCACCACTCAGCAGCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000016406.14 ENSMUST00000155503.3 ENSMUST00000155579.8 |
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| CDS CAA 90 bp | CTGTTCTGCATGACAATCTCCCCGTGGATCCTCTTCATCAGGTTGTaGATCAGAACAGACCTTCGCAGGTACACTTCTGGGTCATCGATG | + |
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Preference number: 6 (lower is better) Translates to: LFCMTISPWILFIRL*IRTDLRRYTSGSSM Trigger: CATCGATGACCCAGAAGTGTACCTGCGAAGGTCTGTTCTGATCAACAACCTGATGAAGAGGATCCACGGGGAGATTGTCATGCAGAACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000016406.14 ENSMUST00000155503.3 ENSMUST00000155579.8 |
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| CDS CAA 72 bp | ATGACAATCTCCCCGTGGATCCTCTTCATCAGGTTGTaGATCAGAACAGACCTTCGCAGGTACACTTCTGGG | + |
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Preference number: 6 (lower is better) Translates to: MTISPWILFIRL*IRTDLRRYTSG Trigger: CCCAGAAGTGTACCTGCGAAGGTCTGTTCTGATCAACAACCTGATGAAGAGGATCCACGGGGAGATTGTCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000016406.14 ENSMUST00000155503.3 ENSMUST00000155579.8 |
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| CDS CAA 90 bp | AAATTGGCCTTTGCACTCAAAATCAAGGTCGTTCCCCACAGGTTCTaGGCCGAGGGCATCACCATCTCTGCTGGTTTCGTGACTTACTTT | + |
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Preference number: 6 (lower is better) Translates to: KLAFALKIKVVPHRF*AEGITISAGFVTYF Trigger: AAAGTAAGTCACGAAACCAGCAGAGATGGTGATGCCCTCGGCCAAGAACCTGTGGGGAACGACCTTGATTTTGAGTGCAAAGGCCAATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016406.14 ENSMUST00000155579.8 |
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| CDS CCA 72 bp | AATGGAGATGGTTTTATGGCTGCAGCTGCTGAGTGGTaGGTGAAGATCCTCGTCTTCTGCATACTTCCTCTT | + |
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Preference number: 6 (lower is better) Translates to: NGDGFMAAAAEW*VKILVFCILPL Trigger: AAGAGGAAGTATGCAGAAGACGAGGATCTTCACCCACCACTCAGCAGCTGCAGCCATAAAACCATCTCCATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000016406.14 ENSMUST00000155503.3 ENSMUST00000155579.8 |
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| CDS CCA 72 bp | GAAAATGGAGATGGTTTTATGGCTGCAGCTGCTGAGTaGTGGGTGAAGATCCTCGTCTTCTGCATACTTCCT | + |
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Preference number: 6 (lower is better) Translates to: ENGDGFMAAAAE*WVKILVFCILP Trigger: AGGAAGTATGCAGAAGACGAGGATCTTCACCCACCACTCAGCAGCTGCAGCCATAAAACCATCTCCATTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016406.14 ENSMUST00000155503.3 ENSMUST00000155579.8 |
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| CDS CAA 72 bp | TGCATGACAATCTCCCCGTGGATCCTCTTCATCAGGTaGTTGATCAGAACAGACCTTCGCAGGTACACTTCT | + |
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Preference number: 6 (lower is better) Translates to: CMTISPWILFIR*LIRTDLRRYTS Trigger: AGAAGTGTACCTGCGAAGGTCTGTTCTGATCAACAACCTGATGAAGAGGATCCACGGGGAGATTGTCATGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000016406.14 ENSMUST00000155503.3 ENSMUST00000155579.8 |
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| CDS GCA 72 bp | GAACCTGAGCTTCTCCAAGGACATGTAAAGGATGTGTaGTCGCTCCTCGAAAATGGAGATGGTTTTATGGCT | + |
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Preference number: 6 (lower is better) Translates to: EPELLQGHVKDV*SLLENGDGFMA Trigger: AGCCATAAAACCATCTCCATTTTCGAGGAGCGAGCACACATCCTTTACATGTCCTTGGAGAAGCTCAGGTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000016406.14 ENSMUST00000155503.3 ENSMUST00000155579.8 |
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| CDS CAA 90 bp | ACCAAGCGACCTAATGTTAGTGACAAAGATTTCGCTGGCGGGTATTaGGCTCTTGTAAATAGGTGCACTGCCTATGTCAAAGTCCACATG | + |
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Preference number: 6 (lower is better) Translates to: TKRPNVSDKDFAGGY*ALVNRCTAYVKVHM Trigger: CATGTGGACTTTGACATAGGCAGTGCACCTATTTACAAGAGCCAAATACCCGCCAGCGAAATCTTTGTCACTAACATTAGGTCGCTTGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016406.14 ENSMUST00000155579.8 |
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