Pregenerated sensors for SERTAD1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000008384Ensembl transcript IDs: ENSMUST00000008528.8, ENSMUST00000135881.2
Found 62 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CAGGACTCAGTACAGTCTCTCCAAAGTGACCCTGGCTCTCCTCTGTaGGGGGACGCCACCTGTGTCGTGTCAAAGTGGGTTGGTGTCACC | + |
|
Preference number: 1 (lower is better) Translates to: QDSVQSLQSDPGSPL*GDATCVVSKWVGVT Trigger: GGTGACACCAACCCACTTTGACACGACACAGGTGGCGTCCCCTCACAGAGGAGAGCCAGGGTCACTTTGGAGAGACTGTACTGAGTCCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000008528.8 |
||
| 3UTR TCA 90 bp | TGGATGGATGTGAAGTTCCCAGGACTCAGTACAGTCTCTCCAAAGTaGCCCTGGCTCTCCTCTGTGAGGGGACGCCACCTGTGTCGTGTC | + |
|
Preference number: 1 (lower is better) Translates to: WMDVKFPGLSTVSPK*PWLSSVRGRHLCRV Trigger: GACACGACACAGGTGGCGTCCCCTCACAGAGGAGAGCCAGGGTCACTTTGGAGAGACTGTACTGAGTCCTGGGAACTTCACATCCATCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008528.8 |
||
| 3UTR CCA 90 bp | GGCCCTGTCATTTCACCACTCGGGGCTCATTTCCAACTCCTTCACTaGTCAAGACAGGTGGATGGATGTGAAGTTCCCAGGACTCAGTAC | + |
|
Preference number: 1 (lower is better) Translates to: GPVISPLGAHFQLLH*SRQVDGCEVPRTQY Trigger: GTACTGAGTCCTGGGAACTTCACATCCATCCACCTGTCTTGACCAGTGAAGGAGTTGGAAATGAGCCCCGAGTGGTGAAATGACAGGGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008528.8 |
||
| 3UTR TCA 90 bp | GGCTCATTTCCAACTCCTTCACTGGTCAAGACAGGTGGATGGATGTaGAGTTCCCAGGACTCAGTACAGTCTCTCCAAAGTGACCCTGGC | + |
|
Preference number: 1 (lower is better) Translates to: GSFPTPSLVKTGGWM*SSQDSVQSLQSDPG Trigger: GCCAGGGTCACTTTGGAGAGACTGTACTGAGTCCTGGGAACTTCACATCCATCCACCTGTCTTGACCAGTGAAGGAGTTGGAAATGAGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008528.8 |
||
| 3UTR CCA 90 bp | CACCACTCGGGGCTCATTTCCAACTCCTTCACTGGTCAAGACAGGTaGATGGATGTGAAGTTCCCAGGACTCAGTACAGTCTCTCCAAAG | + |
|
Preference number: 1 (lower is better) Translates to: HHSGLISNSFTGQDR*MDVKFPGLSTVSPK Trigger: CTTTGGAGAGACTGTACTGAGTCCTGGGAACTTCACATCCATCCACCTGTCTTGACCAGTGAAGGAGTTGGAAATGAGCCCCGAGTGGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008528.8 |
||
| 3UTR CAA 90 bp | GCTCTCCTCTGTGAGGGGACGCCACCTGTGTCGTGTCAAAGTGGGTaGGTGTCACCACCAGGCTCAACTCAGATCCAAGTCAATTCTCCC | + |
|
Preference number: 2 (lower is better) Translates to: ALLCEGTPPVSCQSG*VSPPGSTQIQVNSP Trigger: GGGAGAATTGACTTGGATCTGAGTTGAGCCTGGTGGTGACACCAACCCACTTTGACACGACACAGGTGGCGTCCCCTCACAGAGGAGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008528.8 |
||
| 3UTR-3UTR TCA 90 bp | AGCCTGGCCCAAACACCATTACTGTCACTGGGCCCTGTCATTTCACCACTCGGGACAGTCTCTCCAAAGTaGCCCTGGCTCTCCTCTGTG | + |
|
Preference number: 2 (lower is better) Translates to: SLAQTPLLSLGPVISPLGTVSPK*PWLSSV Trigger: CACAGAGGAGAGCCAGGGTCACTTTGGAGAGACTGT...CCCGAGTGGTGAAATGACAGGGCCCAGTGACAGTAATGGTGTTTGGGCCAGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008528.8 |
||
| 3UTR-3UTR CCA 90 bp | TATCCCAGTTCAACCCCAGCCTGGCCCAAACACCATTACTGTCACTGGGCCCTGCGTGTCAAAGTGGGTTaGTGTCACCACCAGGCTCAA | + |
|
Preference number: 2 (lower is better) Translates to: YPSSTPAWPKHHYCHWALRVKVG*CHHQAQ Trigger: TTGAGCCTGGTGGTGACACCAACCCACTTTGACACG...CAGGGCCCAGTGACAGTAATGGTGTTTGGGCCAGGCTGGGGTTGAACTGGGATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008528.8 |
||
| 3UTR-3UTR TCA 90 bp | AGCCTGGCCCAAACACCATTACTGTCACTGGGCCCTGTCATTTCACCACTCGGGACAGGTGGATGGATGTaGAGTTCCCAGGACTCAGTA | + |
|
Preference number: 2 (lower is better) Translates to: SLAQTPLLSLGPVISPLGTGGWM*SSQDSV Trigger: TACTGAGTCCTGGGAACTTCACATCCATCCACCTGT...CCCGAGTGGTGAAATGACAGGGCCCAGTGACAGTAATGGTGTTTGGGCCAGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008528.8 |
||
| 3UTR TCA 72 bp | GTACAGTCTCTCCAAAGTGACCCTGGCTCTCCTCTGTaGGGGGACGCCACCTGTGTCGTGTCAAAGTGGGTT | + |
|
Preference number: 3 (lower is better) Translates to: VQSLQSDPGSPL*GDATCVVSKWV Trigger: AACCCACTTTGACACGACACAGGTGGCGTCCCCTCACAGAGGAGAGCCAGGGTCACTTTGGAGAGACTGTAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000008528.8 |
||
| 3UTR-3UTR CAA 90 bp | CCAAACTATTATCCCAGTTCAACCCCAGCCTGGCCCAAACACCATTACTGTCACTCGTGTCAAAGTGGGTaGGTGTCACCACCAGGCTCA | + |
|
Preference number: 3 (lower is better) Translates to: PNYYPSSTPAWPKHHYCHSCQSG*VSPPGS Trigger: TGAGCCTGGTGGTGACACCAACCCACTTTGACACGA...GTGACAGTAATGGTGTTTGGGCCAGGCTGGGGTTGAACTGGGATAATAGTTTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008528.8 |
||
| 3UTR CCA 72 bp | GGGCTCATTTCCAACTCCTTCACTGGTCAAGACAGGTaGATGGATGTGAAGTTCCCAGGACTCAGTACAGTC | + |
|
Preference number: 3 (lower is better) Translates to: GLISNSFTGQDR*MDVKFPGLSTV Trigger: GACTGTACTGAGTCCTGGGAACTTCACATCCATCCACCTGTCTTGACCAGTGAAGGAGTTGGAAATGAGCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008528.8 |
||
| 3UTR CCA 72 bp | ATTATGAGGTCTCTTCCCACACTGGGGATAATGGGATaGGATAGCCCAAACTATTATCCCAGTTCAACCCCA | + |
|
Preference number: 3 (lower is better) Translates to: IMRSLPTLGIMG*DSPNYYPSSTP Trigger: TGGGGTTGAACTGGGATAATAGTTTGGGCTATCCCATCCCATTATCCCCAGTGTGGGAAGAGACCTCATAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000008528.8 |
||
| CDS-3UTR CCA 90 bp | GTGACCCTGGCTCTCCTCTGTGAGGGGACGCCACCTGTGTCGTGTCAAAGTGGGTCAGCGCCCAGGCCCTaGTGGCCTTTCCAGTGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: VTLALLCEGTPPVSCQSGSAPRP*WPFQCL Trigger: CAGGCACTGGAAAGGCCACCAGGGCCTGGGCGCTGA...CCCACTTTGACACGACACAGGTGGCGTCCCCTCACAGAGGAGAGCCAGGGTCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008528.8 |
||
| CDS-3UTR GCA 90 bp | CAGCCTGGCCCAAACACCATTACTGTCACTGGGCCCTGTCATTTCACCACTCGGAGGTCCGGCTCGCTCTaGCGCAGGCTGTGGTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: QPGPNTITVTGPCHFTTRRSGSL*RRLWWS Trigger: GCTCCACCACAGCCTGCGGCAGAGCGAGCCGGACCT...CCGAGTGGTGAAATGACAGGGCCCAGTGACAGTAATGGTGTTTGGGCCAGGCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008528.8 |
||
| CDS-3UTR GCA 90 bp | CCTGGCCCAAACACCATTACTGTCACTGGGCCCTGTCATTTCACCACTCGGGGCACCACAAGCACCAGGTaGCGGAGGTCCGGCTCGCTC | + |
|
Preference number: 4 (lower is better) Translates to: PGPNTITVTGPCHFTTRGTTSTR*RRSGSL Trigger: GAGCGAGCCGGACCTCCGGCACCTGGTGCTTGTGGT...GCCCCGAGTGGTGAAATGACAGGGCCCAGTGACAGTAATGGTGTTTGGGCCAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008528.8 |
||
| CDS-3UTR GCA 90 bp | AGCCTGGCCCAAACACCATTACTGTCACTGGGCCCTGTCATTTCACCACTCGGGAGCCAGAAGGCTGTCTaGCACAGAAGGGGCTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: SLAQTPLLSLGPVISPLGSQKAV*HRRGWG Trigger: CCCCCAGCCCCTTCTGTGGCAGACAGCCTTCTGGCT...CCCGAGTGGTGAAATGACAGGGCCCAGTGACAGTAATGGTGTTTGGGCCAGGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008528.8 |
||
| CDS-3UTR CCA 90 bp | GGGACGCCACCTGTGTCGTGTCAAAGTGGGTTGGTGTCACCACCAGGCTCAACTCTCTGCCGCAGGCTGTaGTGGAGCTTGACCACTGAG | + |
|
Preference number: 4 (lower is better) Translates to: GTPPVSCQSGLVSPPGSTLCRRL*WSLTTE Trigger: CTCAGTGGTCAAGCTCCACCACAGCCTGCGGCAGAG...AGTTGAGCCTGGTGGTGACACCAACCCACTTTGACACGACACAGGTGGCGTCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008528.8 |
||
| CDS-3UTR CCA 90 bp | CTGGCCCAAACACCATTACTGTCACTGGGCCCTGTCATTTCACCACTCGGGGCTTGCCGCAGGCTGTGGTaGAGCTTGACCACTGAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LAQTPLLSLGPVISPLGACRRLW*SLTTER Trigger: CCTCTCAGTGGTCAAGCTCCACCACAGCCTGCGGCA...AGCCCCGAGTGGTGAAATGACAGGGCCCAGTGACAGTAATGGTGTTTGGGCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008528.8 |
||
| CDS-3UTR CCA 90 bp | CAGCCTGGCCCAAACACCATTACTGTCACTGGGCCCTGTCATTTCACCACTCGGGGTTCCATGGACGCCTaGATGCGCCTCAGTGTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: QPGPNTITVTGPCHFTTRGSMDA*MRLSVF Trigger: GAACACACTGAGGCGCATCCAGGCGTCCATGGAACC...CCGAGTGGTGAAATGACAGGGCCCAGTGACAGTAATGGTGTTTGGGCCAGGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008528.8 |
||
| CDS-3UTR CCA 90 bp | GTCGTGTCAAAGTGGGTTGGTGTCACCACCAGGCTCAACTCAGATCCAAGTCAAAGGCTCCTCCTTGGCTaGGCCATTCTCAGGGCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: VVSKWVGVTTRLNSDPSQRLLLG*AILRAG Trigger: CCCGGCCCTGAGAATGGCCCAGCCAAGGAGGAGCCT...TTGACTTGGATCTGAGTTGAGCCTGGTGGTGACACCAACCCACTTTGACACGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008528.8 |
||
| CDS-3UTR TCA 90 bp | TATCCCAGTTCAACCCCAGCCTGGCCCAAACACCATTACTGTCACTGGGCCCTGGGCTGTGGTGGAGCTTaGCCACTGAGAGGTCAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: YPSSTPAWPKHHYCHWALGCGGA*PLRGQR Trigger: TCTTTGACCTCTCAGTGGTCAAGCTCCACCACAGCC...CAGGGCCCAGTGACAGTAATGGTGTTTGGGCCAGGCTGGGGTTGAACTGGGATA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008528.8 |
||
| CDS-3UTR GCA 90 bp | TCAAAGTGGGTTGGTGTCACCACCAGGCTCAACTCAGATCCAAGTCAATTCTCCAGGCGGCAGGACAGGTaGGGGTTCCATGGACGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: SKWVGVTTRLNSDPSQFSRRQDR*GFHGRL Trigger: CAGGCGTCCATGGAACCCGCACCTGTCCTGCCGCCT...GGAGAATTGACTTGGATCTGAGTTGAGCCTGGTGGTGACACCAACCCACTTTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008528.8 |
||
| CDS-3UTR CCA 90 bp | CAGGTGGATGGATGTGAAGTTCCCAGGACTCAGTACAGTCTCTCCAAAGTGACCCAGGTGCGGGTTCCATaGACGCCTGGATGCGCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: QVDGCEVPRTQYSLSKVTQVRVP*TPGCAS Trigger: TGAGGCGCATCCAGGCGTCCATGGAACCCGCACCTG...GGTCACTTTGGAGAGACTGTACTGAGTCCTGGGAACTTCACATCCATCCACCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008528.8 |
||
| CDS-3UTR CCA 90 bp | TGTCGTGTCAAAGTGGGTTGGTGTCACCACCAGGCTCAACTCAGATCCAAGTCACCAGGAGGCTGGCCATaGAGGCTGAGAGGCCAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: CRVKVGWCHHQAQLRSKSPGGWP*RLRGQH Trigger: ATGCTGGCCTCTCAGCCTCCATGGCCAGCCTCCTGG...TGACTTGGATCTGAGTTGAGCCTGGTGGTGACACCAACCCACTTTGACACGACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008528.8 |
||
| CDS-3UTR CCA 90 bp | AGTTCAACCCCAGCCTGGCCCAAACACCATTACTGTCACTGGGCCCTGTCATTTCCAGCAGACAGCCAGTaGCTGGGCCTAGCAAGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SSTPAWPKHHYCHWALSFPADSQ*LGLASP Trigger: TGGACTTGCTAGGCCCAGCCACTGGCTGTCTGCTGG...AAATGACAGGGCCCAGTGACAGTAATGGTGTTTGGGCCAGGCTGGGGTTGAACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008528.8 |
||
| CDS-3UTR CCA 90 bp | TCAAAGTGGGTTGGTGTCACCACCAGGCTCAACTCAGATCCAAGTCAATTCTCCGCGCCCAGGCCCTGGTaGCCTTTCCAGTGCCTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: SKWVGVTTRLNSDPSQFSAPRPW*PFQCLC Trigger: ACACAGGCACTGGAAAGGCCACCAGGGCCTGGGCGC...GGAGAATTGACTTGGATCTGAGTTGAGCCTGGTGGTGACACCAACCCACTTTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008528.8 |
||
| 3UTR CAA 72 bp | TGTGAGGGGACGCCACCTGTGTCGTGTCAAAGTGGGTaGGTGTCACCACCAGGCTCAACTCAGATCCAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: CEGTPPVSCQSG*VSPPGSTQIQV Trigger: GACTTGGATCTGAGTTGAGCCTGGTGGTGACACCAACCCACTTTGACACGACACAGGTGGCGTCCCCTCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008528.8 |
||
| CDS-3UTR TCA 90 bp | CCCAAACTATTATCCCAGTTCAACCCCAGCCTGGCCCAAACACCATTACTGTCATCTCAGGGCCGGGCTTaGGACCCTCAGAGGCTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: PKLLSQFNPSLAQTPLLSSQGRA*DPQRLV Trigger: TACCAGCCTCTGAGGGTCTCAAGCCCGGCCCTGAGA...TGACAGTAATGGTGTTTGGGCCAGGCTGGGGTTGAACTGGGATAATAGTTTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008528.8 |
||
| CDS-3UTR GCA 90 bp | GTCGTGTCAAAGTGGGTTGGTGTCACCACCAGGCTCAACTCAGATCCAAGTCAACCTCCTCCTCCCGCTTaGGCTTCAGACCTTTGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: VVSKWVGVTTRLNSDPSQPPPPA*ASDLCS Trigger: TGAGCAAAGGTCTGAAGCGCAAGCGGGAGGAGGAGG...TTGACTTGGATCTGAGTTGAGCCTGGTGGTGACACCAACCCACTTTGACACGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008528.8 |
||
| CDS-3UTR GCA 90 bp | GTCGTGTCAAAGTGGGTTGGTGTCACCACCAGGCTCAACTCAGATCCAAGTCAACCATGGACGCCTGGATaGGCCTCAGTGTGTTCACCA | + |
|
Preference number: 4 (lower is better) Translates to: VVSKWVGVTTRLNSDPSQPWTPG*ASVCSP Trigger: TGGTGAACACACTGAGGCGCATCCAGGCGTCCATGG...TTGACTTGGATCTGAGTTGAGCCTGGTGGTGACACCAACCCACTTTGACACGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008528.8 |
||
| CDS-3UTR CCA 90 bp | AAACTATTATCCCAGTTCAACCCCAGCCTGGCCCAAACACCATTACTGTCACTGCTGGAGGCTCCTCCTTaGCTGGGCCATTCTCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: KLLSQFNPSLAQTPLLSLLEAPP*LGHSQG Trigger: GCCCTGAGAATGGCCCAGCCAAGGAGGAGCCTCCAG...CAGTGACAGTAATGGTGTTTGGGCCAGGCTGGGGTTGAACTGGGATAATAGTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008528.8 |
||
| CDS-3UTR TCA 90 bp | TCAAAGTGGGTTGGTGTCACCACCAGGCTCAACTCAGATCCAAGTCAATTCTCCGTGGAGCTTGACCACTaGGAGGTCAAAGAGGGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SKWVGVTTRLNSDPSQFSVELDH*EVKEGA Trigger: AGCTCCCTCTTTGACCTCTCAGTGGTCAAGCTCCAC...GGAGAATTGACTTGGATCTGAGTTGAGCCTGGTGGTGACACCAACCCACTTTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008528.8 |
||
| CDS-3UTR CCA 90 bp | AAAATTATGAGGTCTCTTCCCACACTGGGGATAATGGGATGGGATAGCCCAAACTCATCTGCTTGGGGTTaGGGGGCCTGGTTCAGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: KIMRSLPTLGIMGWDSPNSSAWG*GAWFRS Trigger: GGACCTGAACCAGGCCCCCCAACCCCAAGCAGATGA...GTTTGGGCTATCCCATCCCATTATCCCCAGTGTGGGAAGAGACCTCATAATTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000008528.8 |
||
| CDS-3UTR CCA 90 bp | TATCCCAGTTCAACCCCAGCCTGGCCCAAACACCATTACTGTCACTGGGCCCTGGTTCACTGTCGTACATaGAGGTATCGATGTCCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: YPSSTPAWPKHHYCHWALVHCRT*RYRCPQ Trigger: TTGAGGACATCGATACCTCCATGTACGACAGTGAAC...CAGGGCCCAGTGACAGTAATGGTGTTTGGGCCAGGCTGGGGTTGAACTGGGATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008528.8 |
||
| CDS GCA 90 bp | GTCAAAGAGGGAGCTAGAAGCCACCGTCGGCGGGGTCTGCGCCACTaGCGGGTGGCTCGGATCCAACCAGCACGAGTCCACGGAGAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: VKEGARSHRRRGLRH*RVARIQPARVHGEG Trigger: GCCCTCTCCGTGGACTCGTGCTGGTTGGATCCGAGCCACCCGGCAGTGGCGCAGACCCCGCCGACGGTGGCTTCTAGCTCCCTCTTTGAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000008528.8 ENSMUST00000135881.2 |
||
| CDS CCA 90 bp | AGGGAGCTAGAAGCCACCGTCGGCGGGGTCTGCGCCACTGCCGGGTaGCTCGGATCCAACCAGCACGAGTCCACGGAGAGGGCTTCCATC | + |
|
Preference number: 5 (lower is better) Translates to: RELEATVGGVCATAG*LGSNQHESTERASI Trigger: GATGGAAGCCCTCTCCGTGGACTCGTGCTGGTTGGATCCGAGCCACCCGGCAGTGGCGCAGACCCCGCCGACGGTGGCTTCTAGCTCCCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000008528.8 ENSMUST00000135881.2 |
||
| CDS GCA 90 bp | TGGGCTCAGGCGGCAGGACAGGTGCGGGTTCCATGGACGCCTGGATaGGCCTCAGTGTGTTCACCACAAGCACCAGGTGCCGGAGGTCCG | + |
|
Preference number: 5 (lower is better) Translates to: WAQAAGQVRVPWTPG*ASVCSPQAPGAGGP Trigger: CGGACCTCCGGCACCTGGTGCTTGTGGTGAACACACTGAGGCGCATCCAGGCGTCCATGGAACCCGCACCTGTCCTGCCGCCTGAGCCCA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008528.8 |
||
| CDS TCA 90 bp | GAGGTCCGGCTCGCTCTGCCGCAGGCTGTGGTGGAGCTTGACCACTaGGAGGTCAAAGAGGGAGCTAGAAGCCACCGTCGGCGGGGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: EVRLALPQAVVELDH*EVKEGARSHRRRGL Trigger: CAGACCCCGCCGACGGTGGCTTCTAGCTCCCTCTTTGACCTCTCAGTGGTCAAGCTCCACCACAGCCTGCGGCAGAGCGAGCCGGACCTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000008528.8 ENSMUST00000135881.2 |
||
| CDS GCA 90 bp | ACTGAGAGGTCAAAGAGGGAGCTAGAAGCCACCGTCGGCGGGGTCTaGGCCACTGCCGGGTGGCTCGGATCCAACCAGCACGAGTCCACG | + |
|
Preference number: 5 (lower is better) Translates to: TERSKRELEATVGGV*ATAGWLGSNQHEST Trigger: CGTGGACTCGTGCTGGTTGGATCCGAGCCACCCGGCAGTGGCGCAGACCCCGCCGACGGTGGCTTCTAGCTCCCTCTTTGACCTCTCAGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000008528.8 ENSMUST00000135881.2 |
||
| CDS GCA 90 bp | ATGGACGCCTGGATGCGCCTCAGTGTGTTCACCACAAGCACCAGGTaGCGGAGGTCCGGCTCGCTCTGCCGCAGGCTGTGGTGGAGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: MDAWMRLSVFTTSTR*RRSGSLCRRLWWSL Trigger: CAAGCTCCACCACAGCCTGCGGCAGAGCGAGCCGGACCTCCGGCACCTGGTGCTTGTGGTGAACACACTGAGGCGCATCCAGGCGTCCAT 66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000008528.8 ENSMUST00000135881.2 |
||
| CDS CCA 90 bp | TGGATGGGCTCAGGCGGCAGGACAGGTGCGGGTTCCATGGACGCCTaGATGCGCCTCAGTGTGTTCACCACAAGCACCAGGTGCCGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: WMGSGGRTGAGSMDA*MRLSVFTTSTRCRR Trigger: CCTCCGGCACCTGGTGCTTGTGGTGAACACACTGAGGCGCATCCAGGCGTCCATGGAACCCGCACCTGTCCTGCCGCCTGAGCCCATCCA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008528.8 |
||
| CDS CCA 90 bp | CTGGGGGCTGGATGGGCTCAGGCGGCAGGACAGGTGCGGGTTCCATaGACGCCTGGATGCGCCTCAGTGTGTTCACCACAAGCACCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: LGAGWAQAAGQVRVP*TPGCASVCSPQAPG Trigger: ACCTGGTGCTTGTGGTGAACACACTGAGGCGCATCCAGGCGTCCATGGAACCCGCACCTGTCCTGCCGCCTGAGCCCATCCAGCCCCCAG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000008528.8 |
||
| CDS CCA 90 bp | ACAAGCACCAGGTGCCGGAGGTCCGGCTCGCTCTGCCGCAGGCTGTaGTGGAGCTTGACCACTGAGAGGTCAAAGAGGGAGCTAGAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: TSTRCRRSGSLCRRL*WSLTTERSKRELEA Trigger: GGCTTCTAGCTCCCTCTTTGACCTCTCAGTGGTCAAGCTCCACCACAGCCTGCGGCAGAGCGAGCCGGACCTCCGGCACCTGGTGCTTGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000008528.8 ENSMUST00000135881.2 |
||
| CDS GCA 90 bp | AGTGTGTTCACCACAAGCACCAGGTGCCGGAGGTCCGGCTCGCTCTaGCGCAGGCTGTGGTGGAGCTTGACCACTGAGAGGTCAAAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: SVFTTSTRCRRSGSL*RRLWWSLTTERSKR Trigger: CCTCTTTGACCTCTCAGTGGTCAAGCTCCACCACAGCCTGCGGCAGAGCGAGCCGGACCTCCGGCACCTGGTGCTTGTGGTGAACACACT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000008528.8 ENSMUST00000135881.2 |
||
| CDS TCA 90 bp | GCCCTGGTGGCCTTTCCAGTGCCTGTGTGCCTACTAGTACATCCATaGGGTAGTCCAACTCCGCCTCATCCAACTCTGGAGGCTCCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: ALVAFPVPVCLLVHP*GSPTPPHPTLEAPP Trigger: AGGAGGAGCCTCCAGAGTTGGATGAGGCGGAGTTGGACTACCTCATGGATGTACTAGTAGGCACACAGGCACTGGAAAGGCCACCAGGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008528.8 |
||
| CDS-3UTR CAA 90 bp | AGCCTGGCCCAAACACCATTACTGTCACTGGGCCCTGTCATTTCACCACTCGGGAGGCTGTGGTGGAGCTaGACCACTGAGAGGTCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: SLAQTPLLSLGPVISPLGRLWWS*TTERSK Trigger: CTTTGACCTCTCAGTGGTCAAGCTCCACCACAGCCT...CCCGAGTGGTGAAATGACAGGGCCCAGTGACAGTAATGGTGTTTGGGCCAGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008528.8 |
||
| CDS-3UTR CAA 90 bp | CCCAAACTATTATCCCAGTTCAACCCCAGCCTGGCCCAAACACCATTACTGTCATCTGGAGGCTCCTCCTaGGCTGGGCCATTCTCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: PKLLSQFNPSLAQTPLLSSGGSS*AGPFSG Trigger: CCCTGAGAATGGCCCAGCCAAGGAGGAGCCTCCAGA...TGACAGTAATGGTGTTTGGGCCAGGCTGGGGTTGAACTGGGATAATAGTTTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008528.8 |
||
| CDS-3UTR CAA 90 bp | AGTTCAACCCCAGCCTGGCCCAAACACCATTACTGTCACTGGGCCCTGTCATTTAGGTCCTCAATGTGGTaGAGATCTTCCAGGAGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: SSTPAWPKHHYCHWALSFRSSMW*RSSRRL Trigger: CAGCCTCCTGGAAGATCTCAACCACATTGAGGACCT...AAATGACAGGGCCCAGTGACAGTAATGGTGTTTGGGCCAGGCTGGGGTTGAACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000008528.8 |
||
| CDS GCA 72 bp | TCAAAGAGGGAGCTAGAAGCCACCGTCGGCGGGGTCTaGGCCACTGCCGGGTGGCTCGGATCCAACCAGCAC | + |
|
Preference number: 6 (lower is better) Translates to: SKRELEATVGGV*ATAGWLGSNQH Trigger: GTGCTGGTTGGATCCGAGCCACCCGGCAGTGGCGCAGACCCCGCCGACGGTGGCTTCTAGCTCCCTCTTTGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000008528.8 ENSMUST00000135881.2 |
||
| CDS GCA 72 bp | ACCACAAGCACCAGGTGCCGGAGGTCCGGCTCGCTCTaGCGCAGGCTGTGGTGGAGCTTGACCACTGAGAGG | + |
|
Preference number: 6 (lower is better) Translates to: TTSTRCRRSGSL*RRLWWSLTTER Trigger: CCTCTCAGTGGTCAAGCTCCACCACAGCCTGCGGCAGAGCGAGCCGGACCTCCGGCACCTGGTGCTTGTGGT 67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000008528.8 ENSMUST00000135881.2 |
||
| CDS GCA 72 bp | TGGATGCGCCTCAGTGTGTTCACCACAAGCACCAGGTaGCGGAGGTCCGGCTCGCTCTGCCGCAGGCTGTGG | + |
|
Preference number: 6 (lower is better) Translates to: WMRLSVFTTSTR*RRSGSLCRRLW Trigger: CCACAGCCTGCGGCAGAGCGAGCCGGACCTCCGGCACCTGGTGCTTGTGGTGAACACACTGAGGCGCATCCA 67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000008528.8 ENSMUST00000135881.2 |
||
| CDS CAA 90 bp | AGGTGCCGGAGGTCCGGCTCGCTCTGCCGCAGGCTGTGGTGGAGCTaGACCACTGAGAGGTCAAAGAGGGAGCTAGAAGCCACCGTCGGC | + |
|
Preference number: 6 (lower is better) Translates to: RCRRSGSLCRRLWWS*TTERSKRELEATVG Trigger: GCCGACGGTGGCTTCTAGCTCCCTCTTTGACCTCTCAGTGGTCAAGCTCCACCACAGCCTGCGGCAGAGCGAGCCGGACCTCCGGCACCT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000008528.8 ENSMUST00000135881.2 |
||
| CDS GCA 72 bp | GCGGCAGGACAGGTGCGGGTTCCATGGACGCCTGGATaGGCCTCAGTGTGTTCACCACAAGCACCAGGTGCC | + |
|
Preference number: 6 (lower is better) Translates to: AAGQVRVPWTPG*ASVCSPQAPGA Trigger: GGCACCTGGTGCTTGTGGTGAACACACTGAGGCGCATCCAGGCGTCCATGGAACCCGCACCTGTCCTGCCGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008528.8 |
||
| CDS CCA 72 bp | AGGTGCCGGAGGTCCGGCTCGCTCTGCCGCAGGCTGTaGTGGAGCTTGACCACTGAGAGGTCAAAGAGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: RCRRSGSLCRRL*WSLTTERSKRE Trigger: CTCCCTCTTTGACCTCTCAGTGGTCAAGCTCCACCACAGCCTGCGGCAGAGCGAGCCGGACCTCCGGCACCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000008528.8 ENSMUST00000135881.2 |
||
| CDS CCA 72 bp | TCAGGCGGCAGGACAGGTGCGGGTTCCATGGACGCCTaGATGCGCCTCAGTGTGTTCACCACAAGCACCAGG | + |
|
Preference number: 6 (lower is better) Translates to: SGGRTGAGSMDA*MRLSVFTTSTR Trigger: CCTGGTGCTTGTGGTGAACACACTGAGGCGCATCCAGGCGTCCATGGAACCCGCACCTGTCCTGCCGCCTGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008528.8 |
||
| CDS CCA 72 bp | CTCCGCCTCATCCAACTCTGGAGGCTCCTCCTTGGCTaGGCCATTCTCAGGGCCGGGCTTGAGACCCTCAGA | + |
|
Preference number: 6 (lower is better) Translates to: LRLIQLWRLLLG*AILRAGLETLR Trigger: TCTGAGGGTCTCAAGCCCGGCCCTGAGAATGGCCCAGCCAAGGAGGAGCCTCCAGAGTTGGATGAGGCGGAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008528.8 |
||
| CDS CAA 72 bp | TCCAACTCCGCCTCATCCAACTCTGGAGGCTCCTCCTaGGCTGGGCCATTCTCAGGGCCGGGCTTGAGACCC | + |
|
Preference number: 6 (lower is better) Translates to: SNSASSNSGGSS*AGPFSGPGLRP Trigger: GGGTCTCAAGCCCGGCCCTGAGAATGGCCCAGCCAAGGAGGAGCCTCCAGAGTTGGATGAGGCGGAGTTGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008528.8 |
||
| CDS TCA 72 bp | CTCGCTCTGCCGCAGGCTGTGGTGGAGCTTGACCACTaGGAGGTCAAAGAGGGAGCTAGAAGCCACCGTCGG | + |
|
Preference number: 6 (lower is better) Translates to: LALPQAVVELDH*EVKEGARSHRR Trigger: CCGACGGTGGCTTCTAGCTCCCTCTTTGACCTCTCAGTGGTCAAGCTCCACCACAGCCTGCGGCAGAGCGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000008528.8 ENSMUST00000135881.2 |
||
| CDS CAA 72 bp | AGGTCCGGCTCGCTCTGCCGCAGGCTGTGGTGGAGCTaGACCACTGAGAGGTCAAAGAGGGAGCTAGAAGCC | + |
|
Preference number: 6 (lower is better) Translates to: RSGSLCRRLWWS*TTERSKRELEA Trigger: GGCTTCTAGCTCCCTCTTTGACCTCTCAGTGGTCAAGCTCCACCACAGCCTGCGGCAGAGCGAGCCGGACCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000008528.8 ENSMUST00000135881.2 |
||
| CDS TCA 72 bp | GCTCCTCCTTGGCTGGGCCATTCTCAGGGCCGGGCTTaGGACCCTCAGAGGCTGGTAACCAAAGTTCACTGT | + |
|
Preference number: 6 (lower is better) Translates to: APPWLGHSQGRA*DPQRLVTKVHC Trigger: ACAGTGAACTTTGGTTACCAGCCTCTGAGGGTCTCAAGCCCGGCCCTGAGAATGGCCCAGCCAAGGAGGAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008528.8 |
||
| CDS TCA 72 bp | GCCTTTCCAGTGCCTGTGTGCCTACTAGTACATCCATaGGGTAGTCCAACTCCGCCTCATCCAACTCTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: AFPVPVCLLVHP*GSPTPPHPTLE Trigger: CTCCAGAGTTGGATGAGGCGGAGTTGGACTACCTCATGGATGTACTAGTAGGCACACAGGCACTGGAAAGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000008528.8 |
||