Pregenerated sensors for SERPINI2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000034139Ensembl transcript IDs: ENSMUST00000039047.5
Found 33 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR GCA 90 bp | GACATTCCACCCATCAATCATTTTCCAGGAGGTGTCTTGTATTCTAAGACCATCTATGCCTGTGGATGCTaGAGCTTCGCTTCCATCTTC | + |
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Preference number: 4 (lower is better) Translates to: DIPPINHFPGGVLYSKTIYACGC*SFASIF Trigger: GAAGATGGAAGCGAAGCTGCAGCATCCACAGGCATA...GATGGTCTTAGAATACAAGACACCTCCTGGAAAATGATTGATGGGTGGAATGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039047.5 |
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| CDS-3UTR GCA 90 bp | GACATTCCACCCATCAATCATTTTCCAGGAGGTGTCTTGTATTCTAAGACCATCTGCTTTCTACCCAGGTaGTTATTGCCTGTGCAGAAG | + |
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Preference number: 4 (lower is better) Translates to: DIPPINHFPGGVLYSKTICFLPR*LLPVQK Trigger: CTTCTGCACAGGCAATAAGCACCTGGGTAGAAAGCA...GATGGTCTTAGAATACAAGACACCTCCTGGAAAATGATTGATGGGTGGAATGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039047.5 |
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| CDS-3UTR GCA 90 bp | ACATTCCACCCATCAATCATTTTCCAGGAGGTGTCTTGTATTCTAAGACCATCAGGTGCTTATTGCCTGTaGAGAAGTCTTTGCATCCAG | + |
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Preference number: 4 (lower is better) Translates to: TFHPSIIFQEVSCILRPSGAYCL*RSLCIQ Trigger: CTGGATGCAAAGACTTCTGCACAGGCAATAAGCACC...TGATGGTCTTAGAATACAAGACACCTCCTGGAAAATGATTGATGGGTGGAATGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039047.5 |
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| CDS-3UTR TCA 90 bp | GACATTCCACCCATCAATCATTTTCCAGGAGGTGTCTTGTATTCTAAGACCATCTTGGTCAGTCGCTCTTaGAGTTTGACTTCCAGAAAA | + |
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Preference number: 4 (lower is better) Translates to: DIPPINHFPGGVLYSKTILVSRS*SLTSRK Trigger: TTTTCTGGAAGTCAAACTTCAAGAGCGACTGACCAA...GATGGTCTTAGAATACAAGACACCTCCTGGAAAATGATTGATGGGTGGAATGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039047.5 |
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| CDS-3UTR TCA 90 bp | GACATTCCACCCATCAATCATTTTCCAGGAGGTGTCTTGTATTCTAAGACCATCAGAAAACTTTCTGCATaGCTCTGGAGACATAGACTT | + |
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Preference number: 4 (lower is better) Translates to: DIPPINHFPGGVLYSKTIRKLSA*LWRHRL Trigger: AAGTCTATGTCTCCAGAGTCATGCAGAAAGTTTTCT...GATGGTCTTAGAATACAAGACACCTCCTGGAAAATGATTGATGGGTGGAATGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039047.5 |
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| CDS-3UTR GCA 90 bp | TTCCACCCATCAATCATTTTCCAGGAGGTGTCTTGTATTCTAAGACCATCATTTCTGTGCAGAAGTCTTTaGATCCAGAAAATCCACCAG | + |
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Preference number: 4 (lower is better) Translates to: FHPSIIFQEVSCILRPSFLCRSL*IQKIHQ Trigger: CTGGTGGATTTTCTGGATGCAAAGACTTCTGCACAG...AAATGATGGTCTTAGAATACAAGACACCTCCTGGAAAATGATTGATGGGTGGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039047.5 |
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| CDS-3UTR CCA 90 bp | ACATTCCACCCATCAATCATTTTCCAGGAGGTGTCTTGTATTCTAAGACCATCACCTTTTGCACCTAGTTaGACCATTCCAAGAAGCATA | + |
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Preference number: 4 (lower is better) Translates to: TFHPSIIFQEVSCILRPSPFAPS*TIPRSI Trigger: TATGCTTCTTGGAATGGTCCAACTAGGTGCAAAAGG...TGATGGTCTTAGAATACAAGACACCTCCTGGAAAATGATTGATGGGTGGAATGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039047.5 |
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| CDS-3UTR TCA 90 bp | ACATTCCACCCATCAATCATTTTCCAGGAGGTGTCTTGTATTCTAAGACCATCAAGTTTTGTAGCACTCTaGAAAAACTCCTTGTTGCTA | + |
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Preference number: 4 (lower is better) Translates to: TFHPSIIFQEVSCILRPSSFVAL*KNSLLL Trigger: TAGCAACAAGGAGTTTTTTCAGAGTGCTACAAAACT...TGATGGTCTTAGAATACAAGACACCTCCTGGAAAATGATTGATGGGTGGAATGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000039047.5 |
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| CDS-3UTR GCA 90 bp | ACATTCCACCCATCAATCATTTTCCAGGAGGTGTCTTGTATTCTAAGACCATCAAAAGTCTTCAGGATCTaGTGTTGTGCTTTTCCTTTT | + |
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Preference number: 4 (lower is better) Translates to: TFHPSIIFQEVSCILRPSKVFRI*CCAFPF Trigger: AAAAGGAAAAGCACAACAGCAGATCCTGAAGACTTT...TGATGGTCTTAGAATACAAGACACCTCCTGGAAAATGATTGATGGGTGGAATGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000039047.5 |
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| CDS-3UTR GCA 90 bp | TTCCACCCATCAATCATTTTCCAGGAGGTGTCTTGTATTCTAAGACCATCATTTTTTTTCCATCTGTTTTaGTTTCTACCCAGGTGCTTA | + |
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Preference number: 4 (lower is better) Translates to: FHPSIIFQEVSCILRPSFFFHLF*FLPRCL Trigger: TAAGCACCTGGGTAGAAAGCAAAACAGATGGAAAAA...AAATGATGGTCTTAGAATACAAGACACCTCCTGGAAAATGATTGATGGGTGGAA 38% GC, longest homopolymer 8 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000039047.5 |
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| CDS-3UTR CCA 90 bp | TTCCACCCATCAATCATTTTCCAGGAGGTGTCTTGTATTCTAAGACCATCATTTAACTCCTTGTTGCTATaGAGATATGTTTCCTTCACA | + |
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Preference number: 4 (lower is better) Translates to: FHPSIIFQEVSCILRPSFNSLLL*RYVSFT Trigger: TGTGAAGGAAACATATCTCCATAGCAACAAGGAGTT...AAATGATGGTCTTAGAATACAAGACACCTCCTGGAAAATGATTGATGGGTGGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039047.5 |
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| CDS TCA 90 bp | ACTTCCACCTCCTCTTCATGCAGCTCGGAGAACCATCTCCGGACGTaGGGAGCAGTAACTTGGTTTTCCACTTCTTCGATGCTCGTGTCT | + |
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Preference number: 5 (lower is better) Translates to: TSTSSSCSSENHLRT*GAVTWFSTSSMLVS Trigger: AGACACGAGCATCGAAGAAGTGGAAAACCAAGTTACTGCTCCTCACGTCCGGAGATGGTTCTCCGAGCTGCATGAAGAGGAGGTGGAAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039047.5 |
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| CDS-3UTR CAA 90 bp | ACATTCCACCCATCAATCATTTTCCAGGAGGTGTCTTGTATTCTAAGACCATCACACAATGAATCCTTCTaGAAGGTAGAGGGCACTGGC | + |
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Preference number: 5 (lower is better) Translates to: TFHPSIIFQEVSCILRPSHNESF*KVEGTG Trigger: GCCAGTGCCCTCTACCTTCAAGAAGGATTCATTGTG...TGATGGTCTTAGAATACAAGACACCTCCTGGAAAATGATTGATGGGTGGAATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039047.5 |
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| CDS TCA 90 bp | ACAGAAATGGATGATTTGCTAGAAATTGAGTCTGAGTCAAACTCATaGTCGCAGGAATGTTTATGCCTGTGGATGCTGCAGCTTCGCTTC | + |
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Preference number: 5 (lower is better) Translates to: TEMDDLLEIESESNS*SQECLCLWMLQLRF Trigger: GAAGCGAAGCTGCAGCATCCACAGGCATAAACATTCCTGCGATCATGAGTTTGACTCAGACTCAATTTCTAGCAAATCATCCATTTCTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039047.5 |
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| CDS-3UTR CAA 90 bp | GACATTCCACCCATCAATCATTTTCCAGGAGGTGTCTTGTATTCTAAGACCATCGTTGTGCTTTTCCTTTaGCACCTAGTTGGACCATTC | + |
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Preference number: 5 (lower is better) Translates to: DIPPINHFPGGVLYSKTIVVLFL*HLVGPF Trigger: GAATGGTCCAACTAGGTGCAAAAGGAAAAGCACAAC...GATGGTCTTAGAATACAAGACACCTCCTGGAAAATGATTGATGGGTGGAATGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039047.5 |
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| CDS GCA 90 bp | CTGAGTCAAACTCATGATCGCAGGAATGTTTATGCCTGTGGATGCTaGAGCTTCGCTTCCATCTTCATTTATCTCAAAGAAAACTTTCTG | + |
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Preference number: 5 (lower is better) Translates to: LSQTHDRRNVYACGC*SFASIFIYLKENFL Trigger: CAGAAAGTTTTCTTTGAGATAAATGAAGATGGAAGCGAAGCTGCAGCATCCACAGGCATAAACATTCCTGCGATCATGAGTTTGACTCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039047.5 |
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| CDS-3UTR CAA 90 bp | GACATTCCACCCATCAATCATTTTCCAGGAGGTGTCTTGTATTCTAAGACCATCTTTGGTCAGTCGCTCTaGAAGTTTGACTTCCAGAAA | + |
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Preference number: 5 (lower is better) Translates to: DIPPINHFPGGVLYSKTIFGQSL*KFDFQK Trigger: TTTCTGGAAGTCAAACTTCAAGAGCGACTGACCAAA...GATGGTCTTAGAATACAAGACACCTCCTGGAAAATGATTGATGGGTGGAATGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039047.5 |
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| CDS-3UTR CAA 90 bp | ACATTCCACCCATCAATCATTTTCCAGGAGGTGTCTTGTATTCTAAGACCATCAGTGAGGAGCAGTAACTaGGTTTTCCACTTCTTCGAT | + |
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Preference number: 5 (lower is better) Translates to: TFHPSIIFQEVSCILRPSVRSSN*VFHFFD Trigger: ATCGAAGAAGTGGAAAACCAAGTTACTGCTCCTCAC...TGATGGTCTTAGAATACAAGACACCTCCTGGAAAATGATTGATGGGTGGAATGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039047.5 |
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| CDS TCA 90 bp | CTCATCAGCCTTGTAAGGCAATTCCAAAACTTGACATGTCATGGATaGCTGAGAAAAATAACCATATTGTGCTCGCAACAGAGCCTTCAT | + |
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Preference number: 5 (lower is better) Translates to: LISLVRQFQNLTCHG*LRKITILCSQQSLH Trigger: ATGAAGGCTCTGTTGCGAGCACAATATGGTTATTTTTCTCAGTCATCCATGACATGTCAAGTTTTGGAATTGCCTTACAAGGCTGATGAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039047.5 |
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| CDS-3UTR CAA 90 bp | GACATTCCACCCATCAATCATTTTCCAGGAGGTGTCTTGTATTCTAAGACCATCATTTTTCCATCTGTTTaGCTTTCTACCCAGGTGCTT | + |
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Preference number: 5 (lower is better) Translates to: DIPPINHFPGGVLYSKTIIFPSV*LSTQVL Trigger: AAGCACCTGGGTAGAAAGCAAAACAGATGGAAAAAT...GATGGTCTTAGAATACAAGACACCTCCTGGAAAATGATTGATGGGTGGAATGTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039047.5 |
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| CDS-3UTR CAA 90 bp | GACATTCCACCCATCAATCATTTTCCAGGAGGTGTCTTGTATTCTAAGACCATCAGAAAAATAACCATATaGTGCTCGCAACAGAGCCTT | + |
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Preference number: 5 (lower is better) Translates to: DIPPINHFPGGVLYSKTIRKITI*CSQQSL Trigger: AAGGCTCTGTTGCGAGCACAATATGGTTATTTTTCT...GATGGTCTTAGAATACAAGACACCTCCTGGAAAATGATTGATGGGTGGAATGTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039047.5 |
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| CDS TCA 90 bp | CAGCTTCGCTTCCATCTTCATTTATCTCAAAGAAAACTTTCTGCATaGCTCTGGAGACATAGACTTCAGATGAGTCTGTTATTCCAGAAA | + |
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Preference number: 5 (lower is better) Translates to: QLRFHLHLSQRKLSA*LWRHRLQMSLLFQK Trigger: TTTCTGGAATAACAGACTCATCTGAAGTCTATGTCTCCAGAGTCATGCAGAAAGTTTTCTTTGAGATAAATGAAGATGGAAGCGAAGCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039047.5 |
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| CDS-3UTR CAA 90 bp | TTCCACCCATCAATCATTTTCCAGGAGGTGTCTTGTATTCTAAGACCATCATTTAATCTCTTCCTTTCGTaGTTTGAATGTCAGGATCTG | + |
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Preference number: 5 (lower is better) Translates to: FHPSIIFQEVSCILRPSFNLFLS*FECQDL Trigger: CAGATCCTGACATTCAAACAACGAAAGGAAGAGATT...AAATGATGGTCTTAGAATACAAGACACCTCCTGGAAAATGATTGATGGGTGGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039047.5 |
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| CDS CCA 90 bp | CTGAGAAAAATAACCATATTGTGCTCGCAACAGAGCCTTCATCATTaGAACCTTTACTGTAGAGCCATCTTTCTTAGTAAAATCTGTCAT | + |
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Preference number: 5 (lower is better) Translates to: LRKITILCSQQSLHH*NLYCRAIFLSKICH Trigger: ATGACAGATTTTACTAAGAAAGATGGCTCTACAGTAAAGGTTCCAATGATGAAGGCTCTGTTGCGAGCACAATATGGTTATTTTTCTCAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039047.5 |
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| CDS CAA 90 bp | TTCATGCAGCTCGGAGAACCATCTCCGGACGTGAGGAGCAGTAACTaGGTTTTCCACTTCTTCGATGCTCGTGTCTTCCGTGGGAAGAAT | + |
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Preference number: 6 (lower is better) Translates to: FMQLGEPSPDVRSSN*VFHFFDARVFRGKN Trigger: ATTCTTCCCACGGAAGACACGAGCATCGAAGAAGTGGAAAACCAAGTTACTGCTCCTCACGTCCGGAGATGGTTCTCCGAGCTGCATGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039047.5 |
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| CDS TCA 72 bp | TCCTCTTCATGCAGCTCGGAGAACCATCTCCGGACGTaGGGAGCAGTAACTTGGTTTTCCACTTCTTCGATG | + |
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Preference number: 6 (lower is better) Translates to: SSSCSSENHLRT*GAVTWFSTSSM Trigger: CATCGAAGAAGTGGAAAACCAAGTTACTGCTCCTCACGTCCGGAGATGGTTCTCCGAGCTGCATGAAGAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039047.5 |
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| CDS CCA 72 bp | AGGATCTGCTGTTGTGCTTTTCCTTTTGCACCTAGTTaGACCATTCCAAGAAGCATAGTGGTTCCAAGAGGG | + |
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Preference number: 6 (lower is better) Translates to: RICCCAFPFAPS*TIPRSIVVPRG Trigger: CCCTCTTGGAACCACTATGCTTCTTGGAATGGTCCAACTAGGTGCAAAAGGAAAAGCACAACAGCAGATCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039047.5 |
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| CDS GCA 72 bp | TTCTACCCAGGTGCTTATTGCCTGTGCAGAAGTCTTTaGATCCAGAAAATCCACCAGTTTTGTAGCACTCTG | + |
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Preference number: 6 (lower is better) Translates to: FYPGAYCLCRSL*IQKIHQFCSTL Trigger: CAGAGTGCTACAAAACTGGTGGATTTTCTGGATGCAAAGACTTCTGCACAGGCAATAAGCACCTGGGTAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039047.5 |
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| CDS TCA 72 bp | AACTTTCTGCATGACTCTGGAGACATAGACTTCAGATaGGTCTGTTATTCCAGAAAGGTCACAGCCACCACT | + |
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Preference number: 6 (lower is better) Translates to: NFLHDSGDIDFR*VCYSRKVTATT Trigger: AGTGGTGGCTGTGACCTTTCTGGAATAACAGACTCATCTGAAGTCTATGTCTCCAGAGTCATGCAGAAAGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039047.5 |
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| CDS TCA 72 bp | GATGATTTGCTAGAAATTGAGTCTGAGTCAAACTCATaGTCGCAGGAATGTTTATGCCTGTGGATGCTGCAG | + |
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Preference number: 6 (lower is better) Translates to: DDLLEIESESNS*SQECLCLWMLQ Trigger: CTGCAGCATCCACAGGCATAAACATTCCTGCGATCATGAGTTTGACTCAGACTCAATTTCTAGCAAATCATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039047.5 |
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| CDS GCA 72 bp | CAAACTCATGATCGCAGGAATGTTTATGCCTGTGGATaGTGCAGCTTCGCTTCCATCTTCATTTATCTCAAA | + |
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Preference number: 6 (lower is better) Translates to: QTHDRRNVYACG*CSFASIFIYLK Trigger: TTTGAGATAAATGAAGATGGAAGCGAAGCTGCAGCATCCACAGGCATAAACATTCCTGCGATCATGAGTTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039047.5 |
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| CDS CAA 90 bp | CTCCTTGTTGCTATGGAGATATGTTTCCTTCACAATGAATCCTTCTaGAAGGTAGAGGGCACTGGCAAGATTAAATGTAAATTCCTGCTT | + |
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Preference number: 6 (lower is better) Translates to: LLVAMEICFLHNESF*KVEGTGKIKCKFLL Trigger: AAGCAGGAATTTACATTTAATCTTGCCAGTGCCCTCTACCTTCAAGAAGGATTCATTGTGAAGGAAACATATCTCCATAGCAACAAGGAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039047.5 |
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| CDS CAA 72 bp | GCTATGGAGATATGTTTCCTTCACAATGAATCCTTCTaGAAGGTAGAGGGCACTGGCAAGATTAAATGTAAA | + |
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Preference number: 6 (lower is better) Translates to: AMEICFLHNESF*KVEGTGKIKCK Trigger: TTTACATTTAATCTTGCCAGTGCCCTCTACCTTCAAGAAGGATTCATTGTGAAGGAAACATATCTCCATAGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039047.5 |
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