Pregenerated sensors for SERPINI1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027834Ensembl transcript IDs: ENSMUST00000029423.9, ENSMUST00000161776.8
Found 96 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCTCTGCCTTCACATACATCCTGTGGCATATGGATGTCTGTGTTCTaGTATACACACACACACACACACACACACACACACACACACACA | + |
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Preference number: 1 (lower is better) Translates to: PLPSHTSCGIWMSVF*YTHTHTHTHTHTHT Trigger: TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATACCAGAACACAGACATCCATATGCCACAGGATGTATGTGAAGGCAGAGG 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029423.9 |
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| 3UTR CCA 90 bp | ATCTCTGGCATTTGTCCTCTGCCTTCACATACATCCTGTGGCATATaGATGTCTGTGTTCTGGTATACACACACACACACACACACACAC | + |
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Preference number: 1 (lower is better) Translates to: ISGICPLPSHTSCGI*MSVFWYTHTHTHTH Trigger: GTGTGTGTGTGTGTGTGTGTGTGTATACCAGAACACAGACATCCATATGCCACAGGATGTATGTGAAGGCAGAGGACAAATGCCAGAGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029423.9 |
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| 3UTR GCA 90 bp | GATTCCAAGTTGGAAAGAGGCAATCAATCTCTGGCATTTGTCCTCTaGCTTCACATACATCCTGTGGCATATGGATGTCTGTGTTCTGGT | + |
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Preference number: 1 (lower is better) Translates to: DSKLERGNQSLAFVL*LHIHPVAYGCLCSG Trigger: ACCAGAACACAGACATCCATATGCCACAGGATGTATGTGAAGGCAGAGGACAAATGCCAGAGATTGATTGCCTCTTTCCAACTTGGAATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029423.9 |
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| 3UTR CCA 90 bp | AGGGACTCTCAGCAAAGGCTATGGTCAGATATCTGCGGCATCATTTaGATGTCAGTAATGATAGAAAGCTGTGGTTCCCACTCTACCTTA | + |
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Preference number: 1 (lower is better) Translates to: RDSQQRLWSDICGII*MSVMIESCGSHSTL Trigger: TAAGGTAGAGTGGGAACCACAGCTTTCTATCATTACTGACATCCAAATGATGCCGCAGATATCTGACCATAGCCTTTGCTGAGAGTCCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029423.9 |
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| 3UTR-3UTR CCA 90 bp | ACCCTCATCTCTCCAATCTCAGTCTGTGAAAATGTGAGGCTGACTTCAAGTACGCAATCTCAATTTCTCTaGCCTTTTGGCCTCCCCTTC | + |
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Preference number: 2 (lower is better) Translates to: TLISPISVCENVRLTSSTQSQFL*PFGLPF Trigger: GAAGGGGAGGCCAAAAGGCCAGAGAAATTGAGATTG...CGTACTTGAAGTCAGCCTCACATTTTCACAGACTGAGATTGGAGAGATGAGGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029423.9 |
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| 3UTR-3UTR CCA 90 bp | ACCCTCATCTCTCCAATCTCAGTCTGTGAAAATGTGAGGCTGACTTCAAGTACGTCTCAGCAAAGGCTATaGTCAGATATCTGCGGCATC | + |
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Preference number: 2 (lower is better) Translates to: TLISPISVCENVRLTSSTSQQRL*SDICGI Trigger: GATGCCGCAGATATCTGACCATAGCCTTTGCTGAGA...CGTACTTGAAGTCAGCCTCACATTTTCACAGACTGAGATTGGAGAGATGAGGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029423.9 |
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| 3UTR CAA 90 bp | AAGGGACTCTCAGCAAAGGCTATGGTCAGATATCTGCGGCATCATTaGGATGTCAGTAATGATAGAAAGCTGTGGTTCCCACTCTACCTT | + |
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Preference number: 2 (lower is better) Translates to: KGLSAKAMVRYLRHH*DVSNDRKLWFPLYL Trigger: AAGGTAGAGTGGGAACCACAGCTTTCTATCATTACTGACATCCAAATGATGCCGCAGATATCTGACCATAGCCTTTGCTGAGAGTCCCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029423.9 |
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| 3UTR CAA 90 bp | GATTCTGGGATTCCAAGTTGGAAAGAGGCAATCAATCTCTGGCATTaGTCCTCTGCCTTCACATACATCCTGTGGCATATGGATGTCTGT | + |
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Preference number: 2 (lower is better) Translates to: DSGIPSWKEAINLWH*SSAFTYILWHMDVC Trigger: ACAGACATCCATATGCCACAGGATGTATGTGAAGGCAGAGGACAAATGCCAGAGATTGATTGCCTCTTTCCAACTTGGAATCCCAGAATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029423.9 |
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| 3UTR-3UTR TCA 90 bp | CTGCCTTCACATACATCCTGTGGCATATGGATGTCTGTGTTCTGGTATACACACTCCAATCTCAGTCTGTaGAAATGTGAGGCTGACTTC | + |
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Preference number: 2 (lower is better) Translates to: LPSHTSCGIWMSVFWYTHSNLSL*KCEADF Trigger: GAAGTCAGCCTCACATTTTCACAGACTGAGATTGGA...GTGTGTATACCAGAACACAGACATCCATATGCCACAGGATGTATGTGAAGGCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029423.9 |
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| 3UTR-3UTR GCA 90 bp | CTGCCTTCACATACATCCTGTGGCATATGGATGTCTGTGTTCTGGTATACACACTCGAGATCACACCAGTaGTTGACAAAGGCATCGTAT | + |
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Preference number: 2 (lower is better) Translates to: LPSHTSCGIWMSVFWYTHSRSHQ*LTKASY Trigger: ATACGATGCCTTTGTCAAGCACTGGTGTGATCTCGA...GTGTGTATACCAGAACACAGACATCCATATGCCACAGGATGTATGTGAAGGCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029423.9 |
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| 3UTR-3UTR CCA 90 bp | CTGCCTTCACATACATCCTGTGGCATATGGATGTCTGTGTTCTGGTATACACACATTTCTCTGGCCTTTTaGCCTCCCCTTCACAGTATT | + |
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Preference number: 2 (lower is better) Translates to: LPSHTSCGIWMSVFWYTHISLAF*PPLHSI Trigger: AATACTGTGAAGGGGAGGCCAAAAGGCCAGAGAAAT...GTGTGTATACCAGAACACAGACATCCATATGCCACAGGATGTATGTGAAGGCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029423.9 |
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| 3UTR-3UTR CCA 90 bp | CTGCCTTCACATACATCCTGTGGCATATGGATGTCTGTGTTCTGGTATACACACTCACTAAAACGTAAATaGTACACGGGATTCCCTCCA | + |
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Preference number: 2 (lower is better) Translates to: LPSHTSCGIWMSVFWYTHSLKRK*YTGFPP Trigger: TGGAGGGAATCCCGTGTACCATTTACGTTTTAGTGA...GTGTGTATACCAGAACACAGACATCCATATGCCACAGGATGTATGTGAAGGCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029423.9 |
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| 3UTR-3UTR CCA 90 bp | CTGCCTTCACATACATCCTGTGGCATATGGATGTCTGTGTTCTGGTATACACACATCTGCGGCATCATTTaGATGTCAGTAATGATAGAA | + |
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Preference number: 2 (lower is better) Translates to: LPSHTSCGIWMSVFWYTHICGII*MSVMIE Trigger: TTCTATCATTACTGACATCCAAATGATGCCGCAGAT...GTGTGTATACCAGAACACAGACATCCATATGCCACAGGATGTATGTGAAGGCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029423.9 |
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| 3UTR-3UTR TCA 90 bp | ATCTCTCCAATCTCAGTCTGTGAAAATGTGAGGCTGACTTCAAGTACGACATTGGAGTGTGCAACAATGTaGTTTCATCTTTGTGTGAAC | + |
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Preference number: 2 (lower is better) Translates to: ISPISVCENVRLTSSTTLECATM*FHLCVN Trigger: GTTCACACAAAGATGAAATCACATTGTTGCACACTC...CAATGTCGTACTTGAAGTCAGCCTCACATTTTCACAGACTGAGATTGGAGAGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029423.9 |
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| 3UTR-3UTR GCA 90 bp | TGGAATGCCACACTAAATAACAATCTCAATTTCTCTGGCCTTTTGGCCTCCCCTAATGTGCTTTGTTCCTaGTTTCTTTGTACTCAAACG | + |
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Preference number: 2 (lower is better) Translates to: WNATLNNNLNFSGLLASPNVLCS*FLCTQT Trigger: CGTTTGAGTACAAAGAAAGCAGGAACAAAGCACATT...AGGGGAGGCCAAAAGGCCAGAGAAATTGAGATTGTTATTTAGTGTGGCATTCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029423.9 |
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| 3UTR-3UTR GCA 90 bp | ACCCTCATCTCTCCAATCTCAGTCTGTGAAAATGTGAGGCTGACTTCAAGTACGCTTGCAAACATAATGTaGTTTGTTCCTGCTTTCTTT | + |
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Preference number: 2 (lower is better) Translates to: TLISPISVCENVRLTSSTLANIM*FVPAFF Trigger: AAAGAAAGCAGGAACAAAGCACATTATGTTTGCAAG...CGTACTTGAAGTCAGCCTCACATTTTCACAGACTGAGATTGGAGAGATGAGGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029423.9 |
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| 3UTR-3UTR CCA 90 bp | CTGCCTTCACATACATCCTGTGGCATATGGATGTCTGTGTTCTGGTATACACACGTATGTTGCTTACTTTaGTGTTTGATTCTGCATGAT | + |
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Preference number: 2 (lower is better) Translates to: LPSHTSCGIWMSVFWYTHVCCLL*CLILHD Trigger: ATCATGCAGAATCAAACACCAAAGTAAGCAACATAC...GTGTGTATACCAGAACACAGACATCCATATGCCACAGGATGTATGTGAAGGCAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029423.9 |
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| 3UTR-3UTR TCA 90 bp | ATGGTCAGATATCTGCGGCATCATTTGGATGTCAGTAATGATAGAAAGCTGTGGGCTTACTTTGGTGTTTaGTTCTGCATGATTATGAAG | + |
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Preference number: 2 (lower is better) Translates to: MVRYLRHHLDVSNDRKLWAYFGV*FCMIMK Trigger: CTTCATAATCATGCAGAATCAAACACCAAAGTAAGC...CCACAGCTTTCTATCATTACTGACATCCAAATGATGCCGCAGATATCTGACCAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029423.9 |
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| 3UTR-3UTR CCA 90 bp | ATGGTCAGATATCTGCGGCATCATTTGGATGTCAGTAATGATAGAAAGCTGTGGGACACAATGACACAATaGGACCATACTCTTTATACT | + |
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Preference number: 2 (lower is better) Translates to: MVRYLRHHLDVSNDRKLWDTMTQ*DHTLYT Trigger: AGTATAAAGAGTATGGTCCCATTGTGTCATTGTGTC...CCACAGCTTTCTATCATTACTGACATCCAAATGATGCCGCAGATATCTGACCAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029423.9 |
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| 3UTR TCA 72 bp | TCCTCCCTGCACCCTCATCTCTCCAATCTCAGTCTGTaGAAATGTGAGGCTGACTTCAAGTACGACATTGCA | + |
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Preference number: 3 (lower is better) Translates to: SSLHPHLSNLSL*KCEADFKYDIA Trigger: TGCAATGTCGTACTTGAAGTCAGCCTCACATTTTCACAGACTGAGATTGGAGAGATGAGGGTGCAGGGAGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029423.9 |
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| 3UTR CCA 72 bp | CGACATTGCAACCCAAGGGACTCTCAGCAAAGGCTATaGTCAGATATCTGCGGCATCATTTGGATGTCAGTA | + |
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Preference number: 3 (lower is better) Translates to: RHCNPRDSQQRL*SDICGIIWMSV Trigger: TACTGACATCCAAATGATGCCGCAGATATCTGACCATAGCCTTTGCTGAGAGTCCCTTGGGTTGCAATGTCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029423.9 |
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| 3UTR CCA 72 bp | TCTGGGATTCCAAGTTGGAAAGAGGCAATCAATCTCTaGCATTTGTCCTCTGCCTTCACATACATCCTGTGG | + |
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Preference number: 3 (lower is better) Translates to: SGIPSWKEAINL*HLSSAFTYILW Trigger: CCACAGGATGTATGTGAAGGCAGAGGACAAATGCCAGAGATTGATTGCCTCTTTCCAACTTGGAATCCCAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029423.9 |
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| 3UTR CCA 72 bp | CAGCAAAGGCTATGGTCAGATATCTGCGGCATCATTTaGATGTCAGTAATGATAGAAAGCTGTGGTTCCCAC | + |
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Preference number: 3 (lower is better) Translates to: QQRLWSDICGII*MSVMIESCGSH Trigger: GTGGGAACCACAGCTTTCTATCATTACTGACATCCAAATGATGCCGCAGATATCTGACCATAGCCTTTGCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029423.9 |
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| 3UTR TCA 72 bp | TCACTAAAACGTAAATGGTACACGGGATTCCCTCCATaGGGCCTCTTGATGTCATCCAGAATAGCTAATGAG | + |
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Preference number: 3 (lower is better) Translates to: SLKRKWYTGFPP*GLLMSSRIANE Trigger: CTCATTAGCTATTCTGGATGACATCAAGAGGCCTCATGGAGGGAATCCCGTGTACCATTTACGTTTTAGTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029423.9 |
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| 3UTR CCA 72 bp | ATTTGTCCTCTGCCTTCACATACATCCTGTGGCATATaGATGTCTGTGTTCTGGTATACACACACACACACA | + |
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Preference number: 3 (lower is better) Translates to: ICPLPSHTSCGI*MSVFWYTHTHT Trigger: TGTGTGTGTGTGTGTATACCAGAACACAGACATCCATATGCCACAGGATGTATGTGAAGGCAGAGGACAAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029423.9 |
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| 3UTR-3UTR CAA 90 bp | CTGCCTTCACATACATCCTGTGGCATATGGATGTCTGTGTTCTGGTATACACACGAGTCATGTGGCATATaGGTTCACAGGAAACTTTTA | + |
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Preference number: 3 (lower is better) Translates to: LPSHTSCGIWMSVFWYTHESCGI*VHRKLL Trigger: TAAAAGTTTCCTGTGAACCAATATGCCACATGACTC...GTGTGTATACCAGAACACAGACATCCATATGCCACAGGATGTATGTGAAGGCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029423.9 |
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| 3UTR-3UTR CAA 90 bp | ACCCTCATCTCTCCAATCTCAGTCTGTGAAAATGTGAGGCTGACTTCAAGTACGTATCTGCGGCATCATTaGGATGTCAGTAATGATAGA | + |
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Preference number: 3 (lower is better) Translates to: TLISPISVCENVRLTSSTYLRHH*DVSNDR Trigger: TCTATCATTACTGACATCCAAATGATGCCGCAGATA...CGTACTTGAAGTCAGCCTCACATTTTCACAGACTGAGATTGGAGAGATGAGGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029423.9 |
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| 3UTR TCA 72 bp | GAGATAAAGACTGTTCTTAGCAGAGAATGTGAACACTaGATTAACACCAGGCATCTCAGCTTCATAAATTAT | + |
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Preference number: 3 (lower is better) Translates to: EIKTVLSRECEH*INTRHLSFINY Trigger: ATAATTTATGAAGCTGAGATGCCTGGTGTTAATTCAGTGTTCACATTCTCTGCTAAGAACAGTCTTTATCTC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029423.9 |
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| CDS-3UTR TCA 90 bp | ACCCTCATCTCTCCAATCTCAGTCTGTGAAAATGTGAGGCTGACTTCAAGTACGGGCTGCAGCGGCTTCTaGCCCTTCTTCATTAACCTC | + |
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Preference number: 4 (lower is better) Translates to: TLISPISVCENVRLTSSTGCSGF*PFFINL Trigger: GAGGTTAATGAAGAAGGGTCAGAAGCCGCTGCAGCC...CGTACTTGAAGTCAGCCTCACATTTTCACAGACTGAGATTGGAGAGATGAGGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029423.9 |
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| CDS-3UTR TCA 90 bp | ACCCTCATCTCTCCAATCTCAGTCTGTGAAAATGTGAGGCTGACTTCAAGTACGGTGCCAGCATCATGCTaGTCTCATCTCCCTCATAGG | + |
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Preference number: 4 (lower is better) Translates to: TLISPISVCENVRLTSSTVPASC*SHLPHR Trigger: CCTATGAGGGAGATGAGATCAGCATGATGCTGGCAC...CGTACTTGAAGTCAGCCTCACATTTTCACAGACTGAGATTGGAGAGATGAGGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029423.9 |
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| CDS-3UTR TCA 90 bp | ATCTCTCCAATCTCAGTCTGTGAAAATGTGAGGCTGACTTCAAGTACGACATTGCGATCAGCTGTGCTTTaGGCAGAGGCTCCAGTGTGG | + |
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Preference number: 4 (lower is better) Translates to: ISPISVCENVRLTSSTTLRSAVL*AEAPVW Trigger: CCACACTGGAGCCTCTGCTCAAAGCACAGCTGATCG...CAATGTCGTACTTGAAGTCAGCCTCACATTTTCACAGACTGAGATTGGAGAGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029423.9 |
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| CDS-3UTR TCA 90 bp | ACCCTCATCTCTCCAATCTCAGTCTGTGAAAATGTGAGGCTGACTTCAAGTACGTGGTCGACAATAACCTaGGGGTACAGCACAGCCATC | + |
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Preference number: 4 (lower is better) Translates to: TLISPISVCENVRLTSSTWSTIT*GYSTAI Trigger: GATGGCTGTGCTGTACCCTCAGGTTATTGTCGACCA...CGTACTTGAAGTCAGCCTCACATTTTCACAGACTGAGATTGGAGAGATGAGGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029423.9 |
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| CDS-3UTR CCA 90 bp | TGGAATGCCACACTAAATAACAATCTCAATTTCTCTGGCCTTTTGGCCTCCCCTGTGGGACTTCCTGTCTaGACAGTGCCAGCATCATGC | + |
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Preference number: 4 (lower is better) Translates to: WNATLNNNLNFSGLLASPVGLPV*TVPASC Trigger: GCATGATGCTGGCACTGTCCAGACAGGAAGTCCCAC...AGGGGAGGCCAAAAGGCCAGAGAAATTGAGATTGTTATTTAGTGTGGCATTCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029423.9 |
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| CDS-3UTR GCA 90 bp | CTGCCTTCACATACATCCTGTGGCATATGGATGTCTGTGTTCTGGTATACACACTTCCTGTCTGGACAGTaGCAGCATCATGCTGATCTC | + |
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Preference number: 4 (lower is better) Translates to: LPSHTSCGIWMSVFWYTHFLSGQ*QHHADL Trigger: GAGATCAGCATGATGCTGGCACTGTCCAGACAGGAA...GTGTGTATACCAGAACACAGACATCCATATGCCACAGGATGTATGTGAAGGCAG 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029423.9 |
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| CDS-3UTR TCA 90 bp | TGGAATGCCACACTAAATAACAATCTCAATTTCTCTGGCCTTTTGGCCTCCCCTGCCACAGCCACATTTTaGCTGAAGTCCACATGGTTG | + |
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Preference number: 4 (lower is better) Translates to: WNATLNNNLNFSGLLASPATATF*LKSTWL Trigger: CAACCATGTGGACTTCAGTCAAAATGTGGCTGTGGC...AGGGGAGGCCAAAAGGCCAGAGAAATTGAGATTGTTATTTAGTGTGGCATTCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029423.9 |
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| CDS-3UTR TCA 90 bp | TGGAATGCCACACTAAATAACAATCTCAATTTCTCTGGCCTTTTGGCCTCCCCTTCAATGCAGGACTTGTaGACAGCTTTGGAGAGGAAC | + |
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Preference number: 4 (lower is better) Translates to: WNATLNNNLNFSGLLASPSMQDL*TALERN Trigger: GTTCCTCTCCAAAGCTGTTCACAAGTCCTGCATTGA...AGGGGAGGCCAAAAGGCCAGAGAAATTGAGATTGTTATTTAGTGTGGCATTCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029423.9 |
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| CDS-3UTR TCA 90 bp | ATCTCTCCAATCTCAGTCTGTGAAAATGTGAGGCTGACTTCAAGTACGACATTGTTTCCTGTTCCACAGTaGACCTGGGCAAGTACACTT | + |
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Preference number: 4 (lower is better) Translates to: ISPISVCENVRLTSSTTLFPVPQ*TWASTL Trigger: AAGTGTACTTGCCCAGGTTCACTGTGGAACAGGAAA...CAATGTCGTACTTGAAGTCAGCCTCACATTTTCACAGACTGAGATTGGAGAGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029423.9 |
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| 3UTR CAA 72 bp | TCAGCAAAGGCTATGGTCAGATATCTGCGGCATCATTaGGATGTCAGTAATGATAGAAAGCTGTGGTTCCCA | + |
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Preference number: 4 (lower is better) Translates to: SAKAMVRYLRHH*DVSNDRKLWFP Trigger: TGGGAACCACAGCTTTCTATCATTACTGACATCCAAATGATGCCGCAGATATCTGACCATAGCCTTTGCTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029423.9 |
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| CDS-3UTR TCA 90 bp | ACCCTCATCTCTCCAATCTCAGTCTGTGAAAATGTGAGGCTGACTTCAAGTACGGTTATACATGTTCACTaGCCACTCAGTTATGGTTTC | + |
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Preference number: 4 (lower is better) Translates to: TLISPISVCENVRLTSSTVIHVH*PLSYGF Trigger: GAAACCATAACTGAGTGGTCAGTGAACATGTATAAC...CGTACTTGAAGTCAGCCTCACATTTTCACAGACTGAGATTGGAGAGATGAGGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029423.9 |
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| CDS-3UTR CCA 90 bp | ATGGTCAGATATCTGCGGCATCATTTGGATGTCAGTAATGATAGAAAGCTGTGGCTGACCACTCAGTTATaGTTTCATCTGGGAACGTTG | + |
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Preference number: 4 (lower is better) Translates to: MVRYLRHHLDVSNDRKLWLTTQL*FHLGTL Trigger: CAACGTTCCCAGATGAAACCATAACTGAGTGGTCAG...CCACAGCTTTCTATCATTACTGACATCCAAATGATGCCGCAGATATCTGACCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029423.9 |
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| CDS-3UTR TCA 90 bp | TGGAATGCCACACTAAATAACAATCTCAATTTCTCTGGCCTTTTGGCCTCCCCTTTTTCAGGTCTAAACTaGGACTTCCAGTTTCCTTTG | + |
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Preference number: 4 (lower is better) Translates to: WNATLNNNLNFSGLLASPFSGLN*DFQFPL Trigger: CAAAGGAAACTGGAAGTCTCAGTTTAGACCTGAAAA...AGGGGAGGCCAAAAGGCCAGAGAAATTGAGATTGTTATTTAGTGTGGCATTCCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000029423.9 |
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| CDS-3UTR GCA 90 bp | ATGGTCAGATATCTGCGGCATCATTTGGATGTCAGTAATGATAGAAAGCTGTGGTTTCTTCACAGAGTTTaGCCATTCTTCGATCAGCTG | + |
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Preference number: 4 (lower is better) Translates to: MVRYLRHHLDVSNDRKLWFLHRV*PFFDQL Trigger: CAGCTGATCGAAGAATGGGCAAACTCTGTGAAGAAA...CCACAGCTTTCTATCATTACTGACATCCAAATGATGCCGCAGATATCTGACCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029423.9 |
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| CDS-3UTR CCA 90 bp | ATCTCTCCAATCTCAGTCTGTGAAAATGTGAGGCTGACTTCAAGTACGACATTGAGTTTCATCACATATTaGTTTTCTTCGGCAGAGGCC | + |
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Preference number: 4 (lower is better) Translates to: ISPISVCENVRLTSSTTLSFITY*FSSAEA Trigger: GGCCTCTGCCGAAGAAAACCAATATGTGATGAAACT...CAATGTCGTACTTGAAGTCAGCCTCACATTTTCACAGACTGAGATTGGAGAGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029423.9 |
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| CDS-3UTR CCA 90 bp | ACCCTCATCTCTCCAATCTCAGTCTGTGAAAATGTGAGGCTGACTTCAAGTACGGATAAGATAGAGAAATaGATGGTCGACAATAACCTG | + |
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Preference number: 4 (lower is better) Translates to: TLISPISVCENVRLTSSTDKIEK*MVDNNL Trigger: CAGGTTATTGTCGACCATCCATTTCTCTATCTTATC...CGTACTTGAAGTCAGCCTCACATTTTCACAGACTGAGATTGGAGAGATGAGGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029423.9 |
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| CDS-3UTR TCA 90 bp | TGGAATGCCACACTAAATAACAATCTCAATTTCTCTGGCCTTTTGGCCTCCCCTTTTCATCATCTTTCGTaGAGGAGAAAGTTCTGGTAT | + |
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Preference number: 4 (lower is better) Translates to: WNATLNNNLNFSGLLASPFHHLS*RRKFWY Trigger: ATACCAGAACTTTCTCCTTCACGAAAGATGATGAAA...AGGGGAGGCCAAAAGGCCAGAGAAATTGAGATTGTTATTTAGTGTGGCATTCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029423.9 |
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| CDS-3UTR GCA 90 bp | ACCCTCATCTCTCCAATCTCAGTCTGTGAAAATGTGAGGCTGACTTCAAGTACGCACATGGTTGACTTCTaGATTAAAGTACATTTTCAG | + |
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Preference number: 4 (lower is better) Translates to: TLISPISVCENVRLTSSTHMVDF*IKVHFQ Trigger: CTGAAAATGTACTTTAATGCAGAAGTCAACCATGTG...CGTACTTGAAGTCAGCCTCACATTTTCACAGACTGAGATTGGAGAGATGAGGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029423.9 |
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| CDS-3UTR CCA 90 bp | TGGAATGCCACACTAAATAACAATCTCAATTTCTCTGGCCTTTTGGCCTCCCCTGTACAAAGAGCGAATTaGCAAGTTTCATCACATATT | + |
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Preference number: 4 (lower is better) Translates to: WNATLNNNLNFSGLLASPVQRAN*QVSSHI Trigger: AATATGTGATGAAACTTGCCAATTCGCTCTTTGTAC...AGGGGAGGCCAAAAGGCCAGAGAAATTGAGATTGTTATTTAGTGTGGCATTCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029423.9 |
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| CDS-3UTR CCA 90 bp | ATGGTCAGATATCTGCGGCATCATTTGGATGTCAGTAATGATAGAAAGCTGTGGAGTTCCTCAAAGTCATaGCCACTTGTATTCATTGTT | + |
|
Preference number: 4 (lower is better) Translates to: MVRYLRHHLDVSNDRKLWSSSKS*PLVFIV Trigger: AACAATGAATACAAGTGGCCATGACTTTGAGGAACT...CCACAGCTTTCTATCATTACTGACATCCAAATGATGCCGCAGATATCTGACCAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029423.9 |
||
| CDS-3UTR GCA 90 bp | ATGGTCAGATATCTGCGGCATCATTTGGATGTCAGTAATGATAGAAAGCTGTGGTACATCATTGGAATCTaGACTTCACTTTCATCATCT | + |
|
Preference number: 4 (lower is better) Translates to: MVRYLRHHLDVSNDRKLWYIIGI*TSLSSS Trigger: AGATGATGAAAGTGAAGTGCAGATTCCAATGATGTA...CCACAGCTTTCTATCATTACTGACATCCAAATGATGCCGCAGATATCTGACCAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029423.9 |
||
| CDS-3UTR CCA 90 bp | ATGGTCAGATATCTGCGGCATCATTTGGATGTCAGTAATGATAGAAAGCTGTGGTTGTTGATACATCATTaGAATCTGCACTTCACTTTC | + |
|
Preference number: 4 (lower is better) Translates to: MVRYLRHHLDVSNDRKLWLLIHH*NLHFTF Trigger: GAAAGTGAAGTGCAGATTCCAATGATGTATCAACAA...CCACAGCTTTCTATCATTACTGACATCCAAATGATGCCGCAGATATCTGACCAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029423.9 |
||
| 3UTR CAA 72 bp | CAATTTCTCTGGCCTTTTGGCCTCCCCTTCACAGTATaGCTTATTATATATATATATGTATGTTGCTTACTT | + |
|
Preference number: 4 (lower is better) Translates to: QFLWPFGLPFTV*LIIYIYVCCLL Trigger: AAGTAAGCAACATACATATATATATATAATAAGCAATACTGTGAAGGGGAGGCCAAAAGGCCAGAGAAATTG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029423.9 |
||
| CDS CCA 90 bp | CGGTGCCTCGAAGGTGGTTATACATGTTCACTGACCACTCAGTTATaGTTTCATCTGGGAACGTTGCCCCTGTCACCACACTTTGCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: RCLEGGYTCSLTTQL*FHLGTLPLSPHFAR Trigger: CCTTGCAAAGTGTGGTGACAGGGGCAACGTTCCCAGATGAAACCATAACTGAGTGGTCAGTGAACATGTATAACCACCTTCGAGGCACCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029423.9 ENSMUST00000161776.8 |
||
| CDS TCA 90 bp | CCCTCATATCCCATTGAATGGCGGATTTCTTTCCTAGTAGATCCTTaGGCCCCAAGCTCCATCATTCCCATCGCAAGGGCAATGCTTAGT | + |
|
Preference number: 5 (lower is better) Translates to: PSYPIEWRISFLVDP*APSSIIPIARAMLS Trigger: ACTAAGCATTGCCCTTGCGATGGGAATGATGGAGCTTGGGGCTCAAGGATCTACTAGGAAAGAAATCCGCCATTCAATGGGATATGAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029423.9 ENSMUST00000161776.8 |
||
| CDS TCA 90 bp | GCAGCGGCTTCTGACCCTTCTTCATTAACCTCAATGCAGGACTTGTaGACAGCTTTGGAGAGGAACAGCTCTTTCTTATCTGACATGGCA | + |
|
Preference number: 5 (lower is better) Translates to: AAASDPSSLTSMQDL*TALERNSSFLSDMA Trigger: TGCCATGTCAGATAAGAAAGAGCTGTTCCTCTCCAAAGCTGTTCACAAGTCCTGCATTGAGGTTAATGAAGAAGGGTCAGAAGCCGCTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029423.9 |
||
| CDS-3UTR CAA 90 bp | ATGGTCAGATATCTGCGGCATCATTTGGATGTCAGTAATGATAGAAAGCTGTGGCCCTGTCACCACACTTaGCAAGGCCAGCAAAGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: MVRYLRHHLDVSNDRKLWPCHHT*QGQQSK Trigger: CTTGCTTTGCTGGCCTTGCAAAGTGTGGTGACAGGG...CCACAGCTTTCTATCATTACTGACATCCAAATGATGCCGCAGATATCTGACCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029423.9 |
||
| CDS-3UTR CAA 90 bp | ATGGTCAGATATCTGCGGCATCATTTGGATGTCAGTAATGATAGAAAGCTGTGGTCGATCAGCTGTGCTTaGAGCAGAGGCTCCAGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: MVRYLRHHLDVSNDRKLWSISCA*SRGSSV Trigger: CACACTGGAGCCTCTGCTCAAAGCACAGCTGATCGA...CCACAGCTTTCTATCATTACTGACATCCAAATGATGCCGCAGATATCTGACCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029423.9 |
||
| CDS CCA 90 bp | AGTGGAGAGAAGAGAATGTTTTCATCTTCCCCGGTGCCTCGAAGGTaGTTATACATGTTCACTGACCACTCAGTTATGGTTTCATCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: SGEKRMFSSSPVPRR*LYMFTDHSVMVSSG Trigger: CCCAGATGAAACCATAACTGAGTGGTCAGTGAACATGTATAACCACCTTCGAGGCACCGGGGAAGATGAAAACATTCTCTTCTCTCCACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029423.9 ENSMUST00000161776.8 |
||
| CDS-3UTR CAA 90 bp | CTGCCTTCACATACATCCTGTGGCATATGGATGTCTGTGTTCTGGTATACACACTTTCCTAGTAGATCCTaGAGCCCCAAGCTCCATCAT | + |
|
Preference number: 5 (lower is better) Translates to: LPSHTSCGIWMSVFWYTHFPSRS*SPKLHH Trigger: ATGATGGAGCTTGGGGCTCAAGGATCTACTAGGAAA...GTGTGTATACCAGAACACAGACATCCATATGCCACAGGATGTATGTGAAGGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029423.9 |
||
| CDS-3UTR CAA 90 bp | CTGCCTTCACATACATCCTGTGGCATATGGATGTCTGTGTTCTGGTATACACACTTCTCCACCCATTTATaGATGGAGTTAGCCACAGCC | + |
|
Preference number: 5 (lower is better) Translates to: LPSHTSCGIWMSVFWYTHFSTHL*MELATA Trigger: GGCTGTGGCTAACTCCATCAATAAATGGGTGGAGAA...GTGTGTATACCAGAACACAGACATCCATATGCCACAGGATGTATGTGAAGGCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029423.9 |
||
| CDS-3UTR CAA 90 bp | ATGGTCAGATATCTGCGGCATCATTTGGATGTCAGTAATGATAGAAAGCTGTGGGGGTATCTCAAGGACTaGGTAGATACCACCAGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: MVRYLRHHLDVSNDRKLWGYLKD*VDTTSL Trigger: GAGGCTGGTGGTATCTACCAAGTCCTTGAGATACCC...CCACAGCTTTCTATCATTACTGACATCCAAATGATGCCGCAGATATCTGACCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029423.9 |
||
| CDS-3UTR CAA 90 bp | ATGGTCAGATATCTGCGGCATCATTTGGATGTCAGTAATGATAGAAAGCTGTGGTTTCATCTGGGAACGTaGCCCCTGTCACCACACTTT | + |
|
Preference number: 5 (lower is better) Translates to: MVRYLRHHLDVSNDRKLWFHLGT*PLSPHF Trigger: AAAGTGTGGTGACAGGGGCAACGTTCCCAGATGAAA...CCACAGCTTTCTATCATTACTGACATCCAAATGATGCCGCAGATATCTGACCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029423.9 |
||
| CDS-3UTR CAA 90 bp | ATCTCTCCAATCTCAGTCTGTGAAAATGTGAGGCTGACTTCAAGTACGACATTGGACCCTCATATCCCATaGAATGGCGGATTTCTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: ISPISVCENVRLTSSTTLDPHIP*NGGFLS Trigger: GGAAAGAAATCCGCCATTCAATGGGATATGAGGGTC...CAATGTCGTACTTGAAGTCAGCCTCACATTTTCACAGACTGAGATTGGAGAGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029423.9 |
||
| CDS-3UTR CAA 90 bp | ACCCTCATCTCTCCAATCTCAGTCTGTGAAAATGTGAGGCTGACTTCAAGTACGAAGTTTCATCACATATaGGTTTTCTTCGGCAGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: TLISPISVCENVRLTSSTKFHHI*VFFGRG Trigger: GCCTCTGCCGAAGAAAACCAATATGTGATGAAACTT...CGTACTTGAAGTCAGCCTCACATTTTCACAGACTGAGATTGGAGAGATGAGGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029423.9 |
||
| CDS-3UTR CAA 90 bp | ATGGTCAGATATCTGCGGCATCATTTGGATGTCAGTAATGATAGAAAGCTGTGGAGCCACAGCCACATTTaGACTGAAGTCCACATGGTT | + |
|
Preference number: 5 (lower is better) Translates to: MVRYLRHHLDVSNDRKLWSHSHI*TEVHMV Trigger: AACCATGTGGACTTCAGTCAAAATGTGGCTGTGGCT...CCACAGCTTTCTATCATTACTGACATCCAAATGATGCCGCAGATATCTGACCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029423.9 |
||
| CDS-3UTR CAA 90 bp | ACCCTCATCTCTCCAATCTCAGTCTGTGAAAATGTGAGGCTGACTTCAAGTACGATACCACCAGCCTCATaGGATCCATCACTAAATTCA | + |
|
Preference number: 5 (lower is better) Translates to: TLISPISVCENVRLTSSTIPPAS*DPSLNS Trigger: TGAATTTAGTGATGGATCCAATGAGGCTGGTGGTAT...CGTACTTGAAGTCAGCCTCACATTTTCACAGACTGAGATTGGAGAGATGAGGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029423.9 |
||
| CDS-3UTR CAA 90 bp | CTGCCTTCACATACATCCTGTGGCATATGGATGTCTGTGTTCTGGTATACACACGTACACTTCCACCTTTaGTTTCTTCACAGAGTTTGC | + |
|
Preference number: 5 (lower is better) Translates to: LPSHTSCGIWMSVFWYTHVHFHL*FLHRVC Trigger: GCAAACTCTGTGAAGAAACAAAAGGTGGAAGTGTAC...GTGTGTATACCAGAACACAGACATCCATATGCCACAGGATGTATGTGAAGGCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029423.9 |
||
| CDS-3UTR CAA 90 bp | ATCTCTCCAATCTCAGTCTGTGAAAATGTGAGGCTGACTTCAAGTACGACATTGGTTTCTTCACAGAGTTaGCCCATTCTTCGATCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: ISPISVCENVRLTSSTTLVSSQS*PILRSA Trigger: AGCTGATCGAAGAATGGGCAAACTCTGTGAAGAAAC...CAATGTCGTACTTGAAGTCAGCCTCACATTTTCACAGACTGAGATTGGAGAGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029423.9 |
||
| CDS-3UTR CAA 90 bp | ACCCTCATCTCTCCAATCTCAGTCTGTGAAAATGTGAGGCTGACTTCAAGTACGTGTACAAAGAGCGAATaGGCAAGTTTCATCACATAT | + |
|
Preference number: 5 (lower is better) Translates to: TLISPISVCENVRLTSSTCTKSE*ASFITY Trigger: ATATGTGATGAAACTTGCCAATTCGCTCTTTGTACA...CGTACTTGAAGTCAGCCTCACATTTTCACAGACTGAGATTGGAGAGATGAGGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029423.9 |
||
| CDS-3UTR CAA 90 bp | ATCTCTCCAATCTCAGTCTGTGAAAATGTGAGGCTGACTTCAAGTACGACATTGCTGAAGTCCACATGGTaGACTTCTGCATTAAAGTAC | + |
|
Preference number: 5 (lower is better) Translates to: ISPISVCENVRLTSSTTLLKSTW*TSALKY Trigger: GTACTTTAATGCAGAAGTCAACCATGTGGACTTCAG...CAATGTCGTACTTGAAGTCAGCCTCACATTTTCACAGACTGAGATTGGAGAGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029423.9 |
||
| CDS-3UTR CAA 90 bp | ATGGTCAGATATCTGCGGCATCATTTGGATGTCAGTAATGATAGAAAGCTGTGGCAAAGTCATGGCCACTaGTATTCATTGTTTCAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: MVRYLRHHLDVSNDRKLWQSHGH*YSLFQG Trigger: ACCCTGAAACAATGAATACAAGTGGCCATGACTTTG...CCACAGCTTTCTATCATTACTGACATCCAAATGATGCCGCAGATATCTGACCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029423.9 |
||
| CDS-3UTR CAA 90 bp | ATGGTCAGATATCTGCGGCATCATTTGGATGTCAGTAATGATAGAAAGCTGTGGGACATGAAATCCATTTaGTACAAAGAGCGAATTGGC | + |
|
Preference number: 5 (lower is better) Translates to: MVRYLRHHLDVSNDRKLWDMKSI*YKERIG Trigger: GCCAATTCGCTCTTTGTACAAAATGGATTTCATGTC...CCACAGCTTTCTATCATTACTGACATCCAAATGATGCCGCAGATATCTGACCAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029423.9 |
||
| CDS-3UTR CAA 90 bp | TGGAATGCCACACTAAATAACAATCTCAATTTCTCTGGCCTTTTGGCCTCCCCTTTGAAATATACAGCATaGATGAGGGCCAAATTAGTG | + |
|
Preference number: 5 (lower is better) Translates to: WNATLNNNLNFSGLLASPLKYTA*MRAKLV Trigger: CACTAATTTGGCCCTCATCAATGCTGTATATTTCAA...AGGGGAGGCCAAAAGGCCAGAGAAATTGAGATTGTTATTTAGTGTGGCATTCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029423.9 |
||
| CDS GCA 90 bp | GTTAGCCACAGCCACATTTTGACTGAAGTCCACATGGTTGACTTCTaGATTAAAGTACATTTTCAGCATTTGCAAGAATTCCTCATTGAC | + |
|
Preference number: 5 (lower is better) Translates to: VSHSHILTEVHMVDF*IKVHFQHLQEFLID Trigger: GTCAATGAGGAATTCTTGCAAATGCTGAAAATGTACTTTAATGCAGAAGTCAACCATGTGGACTTCAGTCAAAATGTGGCTGTGGCTAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029423.9 ENSMUST00000161776.8 |
||
| CDS-3UTR CAA 90 bp | ATCTCTCCAATCTCAGTCTGTGAAAATGTGAGGCTGACTTCAAGTACGACATTGCTTTCAACAGACTGTTaGTATAATTCTCCACCCATT | + |
|
Preference number: 5 (lower is better) Translates to: ISPISVCENVRLTSSTTLLSTDC*YNSPPI Trigger: AATGGGTGGAGAATTATACAAACAGTCTGTTGAAAG...CAATGTCGTACTTGAAGTCAGCCTCACATTTTCACAGACTGAGATTGGAGAGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029423.9 |
||
| CDS-3UTR CAA 90 bp | ATCTCTCCAATCTCAGTCTGTGAAAATGTGAGGCTGACTTCAAGTACGACATTGGACTTCCAGTTTCCTTaGAAATATACAGCATTGATG | + |
|
Preference number: 5 (lower is better) Translates to: ISPISVCENVRLTSSTTLDFQFP*KYTALM Trigger: CATCAATGCTGTATATTTCAAAGGAAACTGGAAGTC...CAATGTCGTACTTGAAGTCAGCCTCACATTTTCACAGACTGAGATTGGAGAGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029423.9 |
||
| CDS-3UTR CAA 90 bp | ATCTCTCCAATCTCAGTCTGTGAAAATGTGAGGCTGACTTCAAGTACGACATTGCTTGTTGATACATCATaGGAATCTGCACTTCACTTT | + |
|
Preference number: 5 (lower is better) Translates to: ISPISVCENVRLTSSTTLLVDTS*ESALHF Trigger: AAAGTGAAGTGCAGATTCCAATGATGTATCAACAAG...CAATGTCGTACTTGAAGTCAGCCTCACATTTTCACAGACTGAGATTGGAGAGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029423.9 |
||
| CDS GCA 72 bp | TTTCTTCACAGAGTTTGCCCATTCTTCGATCAGCTGTaGTTTGAGCAGAGGCTCCAGTGTGGCCAGTGGGAC | + |
|
Preference number: 6 (lower is better) Translates to: FLHRVCPFFDQL*FEQRLQCGQWD Trigger: GTCCCACTGGCCACACTGGAGCCTCTGCTCAAAGCACAGCTGATCGAAGAATGGGCAAACTCTGTGAAGAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029423.9 |
||
| CDS TCA 72 bp | CCCATTGAATGGCGGATTTCTTTCCTAGTAGATCCTTaGGCCCCAAGCTCCATCATTCCCATCGCAAGGGCA | + |
|
Preference number: 6 (lower is better) Translates to: PIEWRISFLVDP*APSSIIPIARA Trigger: TGCCCTTGCGATGGGAATGATGGAGCTTGGGGCTCAAGGATCTACTAGGAAAGAAATCCGCCATTCAATGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029423.9 ENSMUST00000161776.8 |
||
| CDS CAA 72 bp | TCACTGACCACTCAGTTATGGTTTCATCTGGGAACGTaGCCCCTGTCACCACACTTTGCAAGGCCAGCAAAG | + |
|
Preference number: 6 (lower is better) Translates to: SLTTQLWFHLGT*PLSPHFARPAK Trigger: CTTTGCTGGCCTTGCAAAGTGTGGTGACAGGGGCAACGTTCCCAGATGAAACCATAACTGAGTGGTCAGTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029423.9 ENSMUST00000161776.8 |
||
| CDS TCA 72 bp | TTCCCCGGTGCCTCGAAGGTGGTTATACATGTTCACTaGCCACTCAGTTATGGTTTCATCTGGGAACGTTGC | + |
|
Preference number: 6 (lower is better) Translates to: FPGASKVVIHVH*PLSYGFIWERC Trigger: GCAACGTTCCCAGATGAAACCATAACTGAGTGGTCAGTGAACATGTATAACCACCTTCGAGGCACCGGGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029423.9 ENSMUST00000161776.8 |
||
| CDS TCA 72 bp | ACTAATCGCAATCATTCCGGAGGCTGCAGCGGCTTCTaGCCCTTCTTCATTAACCTCAATGCAGGACTTGTG | + |
|
Preference number: 6 (lower is better) Translates to: TNRNHSGGCSGF*PFFINLNAGLV Trigger: CACAAGTCCTGCATTGAGGTTAATGAAGAAGGGTCAGAAGCCGCTGCAGCCTCCGGAATGATTGCGATTAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029423.9 |
||
| CDS GCA 72 bp | GAGCCCCAAGCTCCATCATTCCCATCGCAAGGGCAATaGTTAGTGGAGAGAAGAGAATGTTTTCATCTTCCC | + |
|
Preference number: 6 (lower is better) Translates to: EPQAPSFPSQGQ*LVERRECFHLP Trigger: GGGAAGATGAAAACATTCTCTTCTCTCCACTAAGCATTGCCCTTGCGATGGGAATGATGGAGCTTGGGGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029423.9 ENSMUST00000161776.8 |
||
| CDS CCA 72 bp | GAAGGTGGTTATACATGTTCACTGACCACTCAGTTATaGTTTCATCTGGGAACGTTGCCCCTGTCACCACAC | + |
|
Preference number: 6 (lower is better) Translates to: EGGYTCSLTTQL*FHLGTLPLSPH Trigger: GTGTGGTGACAGGGGCAACGTTCCCAGATGAAACCATAACTGAGTGGTCAGTGAACATGTATAACCACCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029423.9 ENSMUST00000161776.8 |
||
| CDS CAA 72 bp | GCTGATCTCATCTCCCTCATAGGGTATCTCAAGGACTaGGTAGATACCACCAGCCTCATTGGATCCATCACT | + |
|
Preference number: 6 (lower is better) Translates to: ADLISLIGYLKD*VDTTSLIGSIT Trigger: AGTGATGGATCCAATGAGGCTGGTGGTATCTACCAAGTCCTTGAGATACCCTATGAGGGAGATGAGATCAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029423.9 |
||
| CDS CAA 90 bp | TATACATGTTCACTGACCACTCAGTTATGGTTTCATCTGGGAACGTaGCCCCTGTCACCACACTTTGCAAGGCCAGCAAAGCAAGCAGTT | + |
|
Preference number: 6 (lower is better) Translates to: YTCSLTTQLWFHLGT*PLSPHFARPAKQAV Trigger: AACTGCTTGCTTTGCTGGCCTTGCAAAGTGTGGTGACAGGGGCAACGTTCCCAGATGAAACCATAACTGAGTGGTCAGTGAACATGTATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029423.9 ENSMUST00000161776.8 |
||
| CDS CAA 90 bp | CAGCATCATGCTGATCTCATCTCCCTCATAGGGTATCTCAAGGACTaGGTAGATACCACCAGCCTCATTGGATCCATCACTAAATTCACC | + |
|
Preference number: 6 (lower is better) Translates to: QHHADLISLIGYLKD*VDTTSLIGSITKFT Trigger: GGTGAATTTAGTGATGGATCCAATGAGGCTGGTGGTATCTACCAAGTCCTTGAGATACCCTATGAGGGAGATGAGATCAGCATGATGCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029423.9 |
||
| CDS GCA 72 bp | TTAGTGGAGAGAAGAGAATGTTTTCATCTTCCCCGGTaGCTCGAAGGTGGTTATACATGTTCACTGACCACT | + |
|
Preference number: 6 (lower is better) Translates to: LVERRECFHLPR*LEGGYTCSLTT Trigger: AGTGGTCAGTGAACATGTATAACCACCTTCGAGGCACCGGGGAAGATGAAAACATTCTCTTCTCTCCACTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029423.9 ENSMUST00000161776.8 |
||
| CDS CAA 72 bp | TTCCACAGTGAACCTGGGCAAGTACACTTCCACCTTTaGTTTCTTCACAGAGTTTGCCCATTCTTCGATCAG | + |
|
Preference number: 6 (lower is better) Translates to: FHSEPGQVHFHL*FLHRVCPFFDQ Trigger: CTGATCGAAGAATGGGCAAACTCTGTGAAGAAACAAAAGGTGGAAGTGTACTTGCCCAGGTTCACTGTGGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029423.9 |
||
| CDS CCA 72 bp | AAGAGAATGTTTTCATCTTCCCCGGTGCCTCGAAGGTaGTTATACATGTTCACTGACCACTCAGTTATGGTT | + |
|
Preference number: 6 (lower is better) Translates to: KRMFSSSPVPRR*LYMFTDHSVMV Trigger: AACCATAACTGAGTGGTCAGTGAACATGTATAACCACCTTCGAGGCACCGGGGAAGATGAAAACATTCTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029423.9 ENSMUST00000161776.8 |
||
| CDS CCA 72 bp | TATGCCAGATTTCCTGTTCCTGATAAGATAGAGAAATaGATGGTCGACAATAACCTGAGGGTACAGCACAGC | + |
|
Preference number: 6 (lower is better) Translates to: YARFPVPDKIEK*MVDNNLRVQHS Trigger: GCTGTGCTGTACCCTCAGGTTATTGTCGACCATCCATTTCTCTATCTTATCAGGAACAGGAAATCTGGCATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029423.9 |
||
| CDS TCA 72 bp | ACCCATTTATTGATGGAGTTAGCCACAGCCACATTTTaGCTGAAGTCCACATGGTTGACTTCTGCATTAAAG | + |
|
Preference number: 6 (lower is better) Translates to: THLLMELATATF*LKSTWLTSALK Trigger: CTTTAATGCAGAAGTCAACCATGTGGACTTCAGTCAAAATGTGGCTGTGGCTAACTCCATCAATAAATGGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029423.9 ENSMUST00000161776.8 |
||
| CDS CAA 72 bp | CACCCATTTATTGATGGAGTTAGCCACAGCCACATTTaGACTGAAGTCCACATGGTTGACTTCTGCATTAAA | + |
|
Preference number: 6 (lower is better) Translates to: HPFIDGVSHSHI*TEVHMVDFCIK Trigger: TTTAATGCAGAAGTCAACCATGTGGACTTCAGTCAAAATGTGGCTGTGGCTAACTCCATCAATAAATGGGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029423.9 ENSMUST00000161776.8 |
||
| CDS CAA 90 bp | AGGAACAGCTCTTTCTTATCTGACATGGCAGTCAAATTTGCATCTTaGATGAAAATTTCAGTGACCCCAAGGGCTTTCAAGATGTCTTTT | + |
|
Preference number: 6 (lower is better) Translates to: RNSSFLSDMAVKFAS*MKISVTPRAFKMSF Trigger: AAAAGACATCTTGAAAGCCCTTGGGGTCACTGAAATTTTCATCAAAGATGCAAATTTGACTGCCATGTCAGATAAGAAAGAGCTGTTCCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029423.9 |
||
| CDS TCA 72 bp | GTGAACAGCTTTGGAGAGGAACAGCTCTTTCTTATCTaGCATGGCAGTCAAATTTGCATCTTTGATGAAAAT | + |
|
Preference number: 6 (lower is better) Translates to: VNSFGEEQLFLI*HGSQICIFDEN Trigger: ATTTTCATCAAAGATGCAAATTTGACTGCCATGTCAGATAAGAAAGAGCTGTTCCTCTCCAAAGCTGTTCAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029423.9 |
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| CDS CAA 90 bp | ATAATTCTCCACCCATTTATTGATGGAGTTAGCCACAGCCACATTTaGACTGAAGTCCACATGGTTGACTTCTGCATTAAAGTACATTTT | + |
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Preference number: 6 (lower is better) Translates to: IILHPFIDGVSHSHI*TEVHMVDFCIKVHF Trigger: AAAATGTACTTTAATGCAGAAGTCAACCATGTGGACTTCAGTCAAAATGTGGCTGTGGCTAACTCCATCAATAAATGGGTGGAGAATTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029423.9 ENSMUST00000161776.8 |
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| CDS GCA 72 bp | AGCCACATTTTGACTGAAGTCCACATGGTTGACTTCTaGATTAAAGTACATTTTCAGCATTTGCAAGAATTC | + |
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Preference number: 6 (lower is better) Translates to: SHILTEVHMVDF*IKVHFQHLQEF Trigger: GAATTCTTGCAAATGCTGAAAATGTACTTTAATGCAGAAGTCAACCATGTGGACTTCAGTCAAAATGTGGCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029423.9 ENSMUST00000161776.8 |
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