Pregenerated sensors for SERPINH1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000070436Ensembl transcript IDs: ENSMUST00000094154.6, ENSMUST00000169437.9, ENSMUST00000207849.2, ENSMUST00000207989.2, ENSMUST00000208119.2, ENSMUST00000208749.2
Found 105 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AAGTTCATGACTGTGATGCCCAACATAACAATTCTAGGGCAGGCATaGCAGGGAGCCCCTCCCATGCACTGTCTCCCAGCTCCCACCGCT | + |
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Preference number: 1 (lower is better) Translates to: KFMTVMPNITILGQA*QGAPPMHCLPAPTA Trigger: AGCGGTGGGAGCTGGGAGACAGTGCATGGGAGGGGCTCCCTGGCATGCCTGCCCTAGAATTGTTATGTTGGGCATCACAGTCATGAACTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000094154.6 ENSMUST00000169437.9 ENSMUST00000207849.2 ENSMUST00000208119.2 |
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| 3UTR-3UTR TCA 90 bp | CCCCTCCCATGCACTGTCTCCCAGCTCCCACCGCTGGGCAAGGATCATTTTAAGGGTGAACAGGAAGACTaGAGAGGGCTCGGGGCAAGG | + |
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Preference number: 2 (lower is better) Translates to: PLPCTVSQLPPLGKDHFKGEQED*RGLGAR Trigger: CCTTGCCCCGAGCCCTCTTCAGTCTTCCTGTTCACC...CTTAAAATGATCCTTGCCCAGCGGTGGGAGCTGGGAGACAGTGCATGGGAGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000094154.6 ENSMUST00000169437.9 ENSMUST00000207849.2 ENSMUST00000208119.2 |
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| 3UTR-3UTR TCA 90 bp | GCCCAACATAACAATTCTAGGGCAGGCATGCCAGGGAGCCCCTCCCATGCACTGGGTGAACAGGAAGACTaGAGAGGGCTCGGGGCAAGG | + |
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Preference number: 2 (lower is better) Translates to: AQHNNSRAGMPGSPSHALGEQED*RGLGAR Trigger: CCTTGCCCCGAGCCCTCTTCAGTCTTCCTGTTCACC...CAGTGCATGGGAGGGGCTCCCTGGCATGCCTGCCCTAGAATTGTTATGTTGGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000094154.6 ENSMUST00000169437.9 ENSMUST00000207849.2 ENSMUST00000208119.2 |
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| 3UTR-3UTR CCA 90 bp | GCCCAACATAACAATTCTAGGGCAGGCATGCCAGGGAGCCCCTCCCATGCACTGCCCAGCTCCCACCGCTaGGCAAGGATCATTTTAAGG | + |
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Preference number: 2 (lower is better) Translates to: AQHNNSRAGMPGSPSHALPSSHR*ARIILR Trigger: CCTTAAAATGATCCTTGCCCAGCGGTGGGAGCTGGG...CAGTGCATGGGAGGGGCTCCCTGGCATGCCTGCCCTAGAATTGTTATGTTGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000094154.6 ENSMUST00000169437.9 ENSMUST00000207849.2 ENSMUST00000208119.2 |
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| 3UTR-3UTR CCA 90 bp | CCCCTCCCATGCACTGTCTCCCAGCTCCCACCGCTGGGCAAGGATCATTTTAAGACCCACTCAGACATATaGGAATTCCGATCTGCACTG | + |
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Preference number: 2 (lower is better) Translates to: PLPCTVSQLPPLGKDHFKTHSDI*EFRSAL Trigger: CAGTGCAGATCGGAATTCCCATATGTCTGAGTGGGT...CTTAAAATGATCCTTGCCCAGCGGTGGGAGCTGGGAGACAGTGCATGGGAGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000094154.6 ENSMUST00000169437.9 ENSMUST00000207849.2 ENSMUST00000208119.2 |
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| 3UTR-3UTR TCA 90 bp | GGAGCCCCTCCCATGCACTGTCTCCCAGCTCCCACCGCTGGGCAAGGATCATTTAATATGAACACTGATTaGCTGTTGAGGCAGATTGGA | + |
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Preference number: 2 (lower is better) Translates to: GAPPMHCLPAPTAGQGSFNMNTD*LLRQIG Trigger: TCCAATCTGCCTCAACAGTCAATCAGTGTTCATATT...AAATGATCCTTGCCCAGCGGTGGGAGCTGGGAGACAGTGCATGGGAGGGGCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000094154.6 ENSMUST00000169437.9 ENSMUST00000207849.2 ENSMUST00000208119.2 |
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| 3UTR-3UTR CCA 90 bp | ACAGGAAGACTGAAGAGGGCTCGGGGCAAGGTGACAAAAAGAGCTAGGCTGCCCACCCACTCAGACATATaGGAATTCCGATCTGCACTG | + |
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Preference number: 2 (lower is better) Translates to: TGRLKRARGKVTKRARLPTHSDI*EFRSAL Trigger: CAGTGCAGATCGGAATTCCCATATGTCTGAGTGGGT...GGGCAGCCTAGCTCTTTTTGTCACCTTGCCCCGAGCCCTCTTCAGTCTTCCTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000094154.6 ENSMUST00000169437.9 ENSMUST00000207849.2 ENSMUST00000208119.2 |
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| 3UTR-3UTR TCA 90 bp | CCCCTCCCATGCACTGTCTCCCAGCTCCCACCGCTGGGCAAGGATCATTTTAAGACACTGATTGACTGTTaGGGCAGATTGGATCTAAAA | + |
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Preference number: 2 (lower is better) Translates to: PLPCTVSQLPPLGKDHFKTLIDC*GRLDLK Trigger: TTTTAGATCCAATCTGCCTCAACAGTCAATCAGTGT...CTTAAAATGATCCTTGCCCAGCGGTGGGAGCTGGGAGACAGTGCATGGGAGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000094154.6 ENSMUST00000169437.9 ENSMUST00000207849.2 ENSMUST00000208119.2 |
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| 3UTR-3UTR TCA 90 bp | CCCCTCCCATGCACTGTCTCCCAGCTCCCACCGCTGGGCAAGGATCATTTTAAGAATATGAACACTGATTaGCTGTTGAGGCAGATTGGA | + |
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Preference number: 2 (lower is better) Translates to: PLPCTVSQLPPLGKDHFKNMNTD*LLRQIG Trigger: TCCAATCTGCCTCAACAGTCAATCAGTGTTCATATT...CTTAAAATGATCCTTGCCCAGCGGTGGGAGCTGGGAGACAGTGCATGGGAGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000094154.6 ENSMUST00000169437.9 ENSMUST00000207849.2 ENSMUST00000208119.2 |
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| 3UTR-3UTR GCA 90 bp | GCCCAACATAACAATTCTAGGGCAGGCATGCCAGGGAGCCCCTCCCATGCACTGATTGGATCTAAAACTTaGAGGGCAGAACAAAATGGC | + |
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Preference number: 2 (lower is better) Translates to: AQHNNSRAGMPGSPSHALIGSKT*RAEQNG Trigger: GCCATTTTGTTCTGCCCTGCAAGTTTTAGATCCAAT...CAGTGCATGGGAGGGGCTCCCTGGCATGCCTGCCCTAGAATTGTTATGTTGGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000094154.6 ENSMUST00000169437.9 ENSMUST00000207849.2 ENSMUST00000208119.2 |
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| 3UTR-3UTR TCA 90 bp | CATGACTGTGATGCCCAACATAACAATTCTAGGGCAGGCATGCCAGGGAGCCCCACACTGATTGACTGTTaGGGCAGATTGGATCTAAAA | + |
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Preference number: 2 (lower is better) Translates to: HDCDAQHNNSRAGMPGSPTLIDC*GRLDLK Trigger: TTTTAGATCCAATCTGCCTCAACAGTCAATCAGTGT...GGGGCTCCCTGGCATGCCTGCCCTAGAATTGTTATGTTGGGCATCACAGTCATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000094154.6 ENSMUST00000169437.9 ENSMUST00000207849.2 ENSMUST00000208119.2 |
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| 3UTR-3UTR GCA 90 bp | CATGACTGTGATGCCCAACATAACAATTCTAGGGCAGGCATGCCAGGGAGCCCCATTGGATCTAAAACTTaGAGGGCAGAACAAAATGGC | + |
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Preference number: 2 (lower is better) Translates to: HDCDAQHNNSRAGMPGSPIGSKT*RAEQNG Trigger: GCCATTTTGTTCTGCCCTGCAAGTTTTAGATCCAAT...GGGGCTCCCTGGCATGCCTGCCCTAGAATTGTTATGTTGGGCATCACAGTCATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000094154.6 ENSMUST00000169437.9 ENSMUST00000207849.2 ENSMUST00000208119.2 |
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| 3UTR-3UTR GCA 90 bp | CTTGTACAAACTGTTCTCGTTTTGAAAGCAACAAAGGCTCATATTTCCCTTCCCATTCTAGGGCAGGCATaGCAGGGAGCCCCTCCCATG | + |
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Preference number: 2 (lower is better) Translates to: LVQTVLVLKATKAHISLPILGQA*QGAPPM Trigger: CATGGGAGGGGCTCCCTGGCATGCCTGCCCTAGAAT...GGGAAGGGAAATATGAGCCTTTGTTGCTTTCAAAACGAGAACAGTTTGTACAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000094154.6 ENSMUST00000169437.9 ENSMUST00000207849.2 ENSMUST00000208119.2 |
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| 3UTR-3UTR CCA 90 bp | CTTGTACAAACTGTTCTCGTTTTGAAAGCAACAAAGGCTCATATTTCCCTTCCCCCCAGCTCCCACCGCTaGGCAAGGATCATTTTAAGG | + |
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Preference number: 2 (lower is better) Translates to: LVQTVLVLKATKAHISLPPSSHR*ARIILR Trigger: CCTTAAAATGATCCTTGCCCAGCGGTGGGAGCTGGG...GGGAAGGGAAATATGAGCCTTTGTTGCTTTCAAAACGAGAACAGTTTGTACAAG 47% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000094154.6 ENSMUST00000169437.9 ENSMUST00000207849.2 ENSMUST00000208119.2 |
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| 3UTR-3UTR TCA 90 bp | CTTGTACAAACTGTTCTCGTTTTGAAAGCAACAAAGGCTCATATTTCCCTTCCCAATATGAACACTGATTaGCTGTTGAGGCAGATTGGA | + |
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Preference number: 2 (lower is better) Translates to: LVQTVLVLKATKAHISLPNMNTD*LLRQIG Trigger: TCCAATCTGCCTCAACAGTCAATCAGTGTTCATATT...GGGAAGGGAAATATGAGCCTTTGTTGCTTTCAAAACGAGAACAGTTTGTACAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000094154.6 ENSMUST00000169437.9 ENSMUST00000207849.2 ENSMUST00000208119.2 |
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| 3UTR-3UTR GCA 90 bp | CTTGTACAAACTGTTCTCGTTTTGAAAGCAACAAAGGCTCATATTTCCCTTCCCATTGGATCTAAAACTTaGAGGGCAGAACAAAATGGC | + |
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Preference number: 2 (lower is better) Translates to: LVQTVLVLKATKAHISLPIGSKT*RAEQNG Trigger: GCCATTTTGTTCTGCCCTGCAAGTTTTAGATCCAAT...GGGAAGGGAAATATGAGCCTTTGTTGCTTTCAAAACGAGAACAGTTTGTACAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000094154.6 ENSMUST00000169437.9 ENSMUST00000207849.2 ENSMUST00000208119.2 |
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| 3UTR CCA 72 bp | AGCCCCTCCCATGCACTGTCTCCCAGCTCCCACCGCTaGGCAAGGATCATTTTAAGGATGGGTAGTCTGGGG | + |
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Preference number: 3 (lower is better) Translates to: SPSHALSPSSHR*ARIILRMGSLG Trigger: CCCCAGACTACCCATCCTTAAAATGATCCTTGCCCAGCGGTGGGAGCTGGGAGACAGTGCATGGGAGGGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000094154.6 ENSMUST00000169437.9 ENSMUST00000207849.2 ENSMUST00000208119.2 |
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| 3UTR GCA 72 bp | ACTGTGATGCCCAACATAACAATTCTAGGGCAGGCATaGCAGGGAGCCCCTCCCATGCACTGTCTCCCAGCT | + |
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Preference number: 3 (lower is better) Translates to: TVMPNITILGQA*QGAPPMHCLPA Trigger: AGCTGGGAGACAGTGCATGGGAGGGGCTCCCTGGCATGCCTGCCCTAGAATTGTTATGTTGGGCATCACAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000094154.6 ENSMUST00000169437.9 ENSMUST00000207849.2 ENSMUST00000208119.2 |
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| 3UTR TCA 72 bp | CAGATAGAATGCCTGGCCATAAATATGAACACTGATTaGCTGTTGAGGCAGATTGGATCTAAAACTTGCAGG | + |
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Preference number: 3 (lower is better) Translates to: QIECLAINMNTD*LLRQIGSKTCR Trigger: CCTGCAAGTTTTAGATCCAATCTGCCTCAACAGTCAATCAGTGTTCATATTTATGGCCAGGCATTCTATCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000094154.6 ENSMUST00000169437.9 ENSMUST00000207849.2 ENSMUST00000208119.2 |
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| CDS-3UTR CCA 90 bp | GGAGCCCCTCCCATGCACTGTCTCCCAGCTCCCACCGCTGGGCAAGGATCATTTCCTCCACCACGCCCTTaGGCAGGGAGATGGCGACAG | + |
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Preference number: 4 (lower is better) Translates to: GAPPMHCLPAPTAGQGSFPPPRP*AGRWRQ Trigger: CTGTCGCCATCTCCCTGCCCAAGGGCGTGGTGGAGG...AAATGATCCTTGCCCAGCGGTGGGAGCTGGGAGACAGTGCATGGGAGGGGCTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000094154.6 ENSMUST00000169437.9 ENSMUST00000207849.2 ENSMUST00000208119.2 |
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| CDS-3UTR GCA 90 bp | CCCCTCCCATGCACTGTCTCCCAGCTCCCACCGCTGGGCAAGGATCATTTTAAGAGGCCAGGCCTGTGCTaGGCTCTGCCAGTGTGGTCG | + |
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Preference number: 4 (lower is better) Translates to: PLPCTVSQLPPLGKDHFKRPGLC*ALPVWS Trigger: CGACCACACTGGCAGAGCGCAGCACAGGCCTGGCCT...CTTAAAATGATCCTTGCCCAGCGGTGGGAGCTGGGAGACAGTGCATGGGAGGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000094154.6 ENSMUST00000169437.9 ENSMUST00000207849.2 ENSMUST00000208119.2 |
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| CDS-3UTR GCA 90 bp | ACAGGAAGACTGAAGAGGGCTCGGGGCAAGGTGACAAAAAGAGCTAGGCTGCCCAGGCCAGGCCTGTGCTaGGCTCTGCCAGTGTGGTCG | + |
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Preference number: 4 (lower is better) Translates to: TGRLKRARGKVTKRARLPRPGLC*ALPVWS Trigger: CGACCACACTGGCAGAGCGCAGCACAGGCCTGGCCT...GGGCAGCCTAGCTCTTTTTGTCACCTTGCCCCGAGCCCTCTTCAGTCTTCCTGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000094154.6 ENSMUST00000169437.9 ENSMUST00000207849.2 ENSMUST00000208119.2 |
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| CDS-3UTR GCA 90 bp | GCCCAACATAACAATTCTAGGGCAGGCATGCCAGGGAGCCCCTCCCATGCACTGCTCAGCGCTCAGCACTaGCTTCGCCTGCGACGCTGT | + |
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Preference number: 4 (lower is better) Translates to: AQHNNSRAGMPGSPSHALLSAQH*LRLRRC Trigger: ACAGCGTCGCAGGCGAAGGCAGTGCTGAGCGCTGAG...CAGTGCATGGGAGGGGCTCCCTGGCATGCCTGCCCTAGAATTGTTATGTTGGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000094154.6 ENSMUST00000169437.9 ENSMUST00000207849.2 ENSMUST00000208119.2 |
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| CDS-3UTR GCA 90 bp | CCCCTCCCATGCACTGTCTCCCAGCTCCCACCGCTGGGCAAGGATCATTTTAAGCTCAGCGCTCAGCACTaGCTTCGCCTGCGACGCTGT | + |
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Preference number: 4 (lower is better) Translates to: PLPCTVSQLPPLGKDHFKLSAQH*LRLRRC Trigger: ACAGCGTCGCAGGCGAAGGCAGTGCTGAGCGCTGAG...CTTAAAATGATCCTTGCCCAGCGGTGGGAGCTGGGAGACAGTGCATGGGAGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000094154.6 ENSMUST00000169437.9 ENSMUST00000207849.2 ENSMUST00000208119.2 |
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| CDS-3UTR GCA 90 bp | GGAGCCCCTCCCATGCACTGTCTCCCAGCTCCCACCGCTGGGCAAGGATCATTTCTTGGTCAAAGGGGTTaGCCTCGGTGTCCCACTCGA | + |
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Preference number: 4 (lower is better) Translates to: GAPPMHCLPAPTAGQGSFLGQRG*PRCPTR Trigger: TCGAGTGGGACACCGAGGGCAACCCCTTTGACCAAG...AAATGATCCTTGCCCAGCGGTGGGAGCTGGGAGACAGTGCATGGGAGGGGCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000094154.6 ENSMUST00000169437.9 ENSMUST00000207849.2 ENSMUST00000208119.2 |
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| CDS-3UTR CCA 90 bp | GGAGCCCCTCCCATGCACTGTCTCCCAGCTCCCACCGCTGGGCAAGGATCATTTCCACCGCCTGGTCTTTaGCCATCGCCTGATATAGGC | + |
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Preference number: 4 (lower is better) Translates to: GAPPMHCLPAPTAGQGSFPPPGL*PSPDIG Trigger: GCCTATATCAGGCGATGGCCAAAGACCAGGCGGTGG...AAATGATCCTTGCCCAGCGGTGGGAGCTGGGAGACAGTGCATGGGAGGGGCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000094154.6 ENSMUST00000169437.9 ENSMUST00000207849.2 ENSMUST00000208119.2 |
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| CDS-3UTR CCA 90 bp | ACAGGAAGACTGAAGAGGGCTCGGGGCAAGGTGACAAAAAGAGCTAGGCTGCCCCCTCCACCACGCCCTTaGGCAGGGAGATGGCGACAG | + |
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Preference number: 4 (lower is better) Translates to: TGRLKRARGKVTKRARLPPPPRP*AGRWRQ Trigger: CTGTCGCCATCTCCCTGCCCAAGGGCGTGGTGGAGG...GGGCAGCCTAGCTCTTTTTGTCACCTTGCCCCGAGCCCTCTTCAGTCTTCCTGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000094154.6 ENSMUST00000169437.9 ENSMUST00000207849.2 ENSMUST00000208119.2 |
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| CDS-3UTR TCA 90 bp | CCCCTCCCATGCACTGTCTCCCAGCTCCCACCGCTGGGCAAGGATCATTTTAAGTCGCCTGATATAGGCTaGAGGCCAGGCCTGTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: PLPCTVSQLPPLGKDHFKSPDIG*RPGLCC Trigger: GCAGCACAGGCCTGGCCTTCAGCCTATATCAGGCGA...CTTAAAATGATCCTTGCCCAGCGGTGGGAGCTGGGAGACAGTGCATGGGAGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000094154.6 ENSMUST00000169437.9 ENSMUST00000207849.2 ENSMUST00000208119.2 |
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| CDS-3UTR CCA 90 bp | GCCCAACATAACAATTCTAGGGCAGGCATGCCAGGGAGCCCCTCCCATGCACTGTCGCCTGCGACGCTGTaGTGGCTTTACCACCCAGTG | + |
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Preference number: 4 (lower is better) Translates to: AQHNNSRAGMPGSPSHALSPATL*WLYHPV Trigger: CACTGGGTGGTAAAGCCACCACAGCGTCGCAGGCGA...CAGTGCATGGGAGGGGCTCCCTGGCATGCCTGCCCTAGAATTGTTATGTTGGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000094154.6 ENSMUST00000169437.9 ENSMUST00000207849.2 ENSMUST00000208119.2 |
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| CDS-3UTR TCA 90 bp | ACAGGAAGACTGAAGAGGGCTCGGGGCAAGGTGACAAAAAGAGCTAGGCTGCCCTCGCCTGATATAGGCTaGAGGCCAGGCCTGTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: TGRLKRARGKVTKRARLPSPDIG*RPGLCC Trigger: GCAGCACAGGCCTGGCCTTCAGCCTATATCAGGCGA...GGGCAGCCTAGCTCTTTTTGTCACCTTGCCCCGAGCCCTCTTCAGTCTTCCTGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000094154.6 ENSMUST00000169437.9 ENSMUST00000207849.2 ENSMUST00000208119.2 |
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| CDS-3UTR GCA 90 bp | GCCCAACATAACAATTCTAGGGCAGGCATGCCAGGGAGCCCCTCCCATGCACTGCTTGGTCAAAGGGGTTaGCCTCGGTGTCCCACTCGA | + |
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Preference number: 4 (lower is better) Translates to: AQHNNSRAGMPGSPSHALLGQRG*PRCPTR Trigger: TCGAGTGGGACACCGAGGGCAACCCCTTTGACCAAG...CAGTGCATGGGAGGGGCTCCCTGGCATGCCTGCCCTAGAATTGTTATGTTGGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000094154.6 ENSMUST00000169437.9 ENSMUST00000207849.2 ENSMUST00000208119.2 |
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| CDS-3UTR CCA 90 bp | CCCCTCCCATGCACTGTCTCCCAGCTCCCACCGCTGGGCAAGGATCATTTTAAGCCTTGGGCAGGGAGATaGCGACAGCCTTCTTCTGCA | + |
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Preference number: 4 (lower is better) Translates to: PLPCTVSQLPPLGKDHFKPWAGR*RQPSSA Trigger: TGCAGAAGAAGGCTGTCGCCATCTCCCTGCCCAAGG...CTTAAAATGATCCTTGCCCAGCGGTGGGAGCTGGGAGACAGTGCATGGGAGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000094154.6 ENSMUST00000169437.9 ENSMUST00000207849.2 ENSMUST00000208119.2 |
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| CDS-3UTR CCA 90 bp | GGAGCCCCTCCCATGCACTGTCTCCCAGCTCCCACCGCTGGGCAAGGATCATTTTCGAAGGCAGTGGCATaGAACACACTGGCTAGGTAC | + |
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Preference number: 4 (lower is better) Translates to: GAPPMHCLPAPTAGQGSFSKAVA*NTLARY Trigger: GTACCTAGCCAGTGTGTTCCATGCCACTGCCTTCGA...AAATGATCCTTGCCCAGCGGTGGGAGCTGGGAGACAGTGCATGGGAGGGGCTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000094154.6 ENSMUST00000169437.9 ENSMUST00000207849.2 ENSMUST00000208119.2 |
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| CDS-3UTR TCA 90 bp | CATGACTGTGATGCCCAACATAACAATTCTAGGGCAGGCATGCCAGGGAGCCCCTCGCCTGATATAGGCTaGAGGCCAGGCCTGTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: HDCDAQHNNSRAGMPGSPSPDIG*RPGLCC Trigger: GCAGCACAGGCCTGGCCTTCAGCCTATATCAGGCGA...GGGGCTCCCTGGCATGCCTGCCCTAGAATTGTTATGTTGGGCATCACAGTCATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000094154.6 ENSMUST00000169437.9 ENSMUST00000207849.2 ENSMUST00000208119.2 |
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| CDS-3UTR TCA 90 bp | GCCCAACATAACAATTCTAGGGCAGGCATGCCAGGGAGCCCCTCCCATGCACTGAGCAAGGAGCCGCTCTaGTTATCTCGCACCAGGAAG | + |
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Preference number: 4 (lower is better) Translates to: AQHNNSRAGMPGSPSHALSKEPL*LSRTRK Trigger: CTTCCTGGTGCGAGATAATCAGAGCGGCTCCTTGCT...CAGTGCATGGGAGGGGCTCCCTGGCATGCCTGCCCTAGAATTGTTATGTTGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000094154.6 ENSMUST00000169437.9 ENSMUST00000207849.2 ENSMUST00000208119.2 |
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| CDS-3UTR GCA 90 bp | GCCCAACATAACAATTCTAGGGCAGGCATGCCAGGGAGCCCCTCCCATGCACTGCCAAGAGGCATAAGGTaGCCAGAAGGAGAGAGCGCA | + |
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Preference number: 4 (lower is better) Translates to: AQHNNSRAGMPGSPSHALPRGIR*PEGESA Trigger: TGCGCTCTCTCCTTCTGGGCACCTTATGCCTCTTGG...CAGTGCATGGGAGGGGCTCCCTGGCATGCCTGCCCTAGAATTGTTATGTTGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000094154.6 ENSMUST00000169437.9 ENSMUST00000207849.2 ENSMUST00000208119.2 |
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| CDS-3UTR GCA 90 bp | CCCCTCCCATGCACTGTCTCCCAGCTCCCACCGCTGGGCAAGGATCATTTTAAGGCGACAGCCTTCTTCTaGATCTTTCCCATCCAGGCC | + |
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Preference number: 4 (lower is better) Translates to: PLPCTVSQLPPLGKDHFKATAFF*IFPIQA Trigger: GGCCTGGATGGGAAAGATGCAGAAGAAGGCTGTCGC...CTTAAAATGATCCTTGCCCAGCGGTGGGAGCTGGGAGACAGTGCATGGGAGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000094154.6 ENSMUST00000169437.9 ENSMUST00000207849.2 ENSMUST00000208119.2 |
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| CDS-3UTR GCA 90 bp | GCCCAACATAACAATTCTAGGGCAGGCATGCCAGGGAGCCCCTCCCATGCACTGCCTGCCAGATGTTTCTaGAGGTCATGGGTCACCTCC | + |
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Preference number: 4 (lower is better) Translates to: AQHNNSRAGMPGSPSHALPARCF*RSWVTS Trigger: GGAGGTGACCCATGACCTGCAGAAACATCTGGCAGG...CAGTGCATGGGAGGGGCTCCCTGGCATGCCTGCCCTAGAATTGTTATGTTGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000094154.6 ENSMUST00000169437.9 ENSMUST00000207849.2 ENSMUST00000208119.2 |
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| CDS-3UTR GCA 90 bp | ACAGGAAGACTGAAGAGGGCTCGGGGCAAGGTGACAAAAAGAGCTAGGCTGCCCCTTGGTCAAAGGGGTTaGCCTCGGTGTCCCACTCGA | + |
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Preference number: 4 (lower is better) Translates to: TGRLKRARGKVTKRARLPLGQRG*PRCPTR Trigger: TCGAGTGGGACACCGAGGGCAACCCCTTTGACCAAG...GGGCAGCCTAGCTCTTTTTGTCACCTTGCCCCGAGCCCTCTTCAGTCTTCCTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000094154.6 ENSMUST00000169437.9 ENSMUST00000207849.2 ENSMUST00000208119.2 |
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| CDS-3UTR CCA 90 bp | CCCCTCCCATGCACTGTCTCCCAGCTCCCACCGCTGGGCAAGGATCATTTTAAGCCTTCAGCTGCTCCTTaGTCAGCAGCTTCTCCAAGC | + |
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Preference number: 4 (lower is better) Translates to: PLPCTVSQLPPLGKDHFKPSAAP*SAASPS Trigger: GCTTGGAGAAGCTGCTGACCAAGGAGCAGCTGAAGG...CTTAAAATGATCCTTGCCCAGCGGTGGGAGCTGGGAGACAGTGCATGGGAGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000094154.6 ENSMUST00000169437.9 ENSMUST00000207849.2 ENSMUST00000208119.2 |
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| CDS-3UTR GCA 90 bp | CCCCTCCCATGCACTGTCTCCCAGCTCCCACCGCTGGGCAAGGATCATTTTAAGGGTACAGGTCCTTCTTaGCAGACATGCGCGATAGGT | + |
|
Preference number: 4 (lower is better) Translates to: PLPCTVSQLPPLGKDHFKGTGPS*QTCAIG Trigger: ACCTATCGCGCATGTCTGGCAAGAAGGACCTGTACC...CTTAAAATGATCCTTGCCCAGCGGTGGGAGCTGGGAGACAGTGCATGGGAGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000094154.6 ENSMUST00000169437.9 ENSMUST00000207849.2 ENSMUST00000208119.2 |
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| CDS-3UTR CCA 90 bp | CATGACTGTGATGCCCAACATAACAATTCTAGGGCAGGCATGCCAGGGAGCCCCCCACCGCCTGGTCTTTaGCCATCGCCTGATATAGGC | + |
|
Preference number: 4 (lower is better) Translates to: HDCDAQHNNSRAGMPGSPPPPGL*PSPDIG Trigger: GCCTATATCAGGCGATGGCCAAAGACCAGGCGGTGG...GGGGCTCCCTGGCATGCCTGCCCTAGAATTGTTATGTTGGGCATCACAGTCATG 57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 4 transcripts: ENSMUST00000094154.6 ENSMUST00000169437.9 ENSMUST00000207849.2 ENSMUST00000208119.2 |
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| CDS-3UTR CCA 90 bp | GCCCAACATAACAATTCTAGGGCAGGCATGCCAGGGAGCCCCTCCCATGCACTGTCGAAGGCAGTGGCATaGAACACACTGGCTAGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: AQHNNSRAGMPGSPSHALSKAVA*NTLARY Trigger: GTACCTAGCCAGTGTGTTCCATGCCACTGCCTTCGA...CAGTGCATGGGAGGGGCTCCCTGGCATGCCTGCCCTAGAATTGTTATGTTGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000094154.6 ENSMUST00000169437.9 ENSMUST00000207849.2 ENSMUST00000208119.2 |
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| CDS-3UTR TCA 90 bp | CATGACTGTGATGCCCAACATAACAATTCTAGGGCAGGCATGCCAGGGAGCCCCAGCAAGGAGCCGCTCTaGTTATCTCGCACCAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: HDCDAQHNNSRAGMPGSPSKEPL*LSRTRK Trigger: CTTCCTGGTGCGAGATAATCAGAGCGGCTCCTTGCT...GGGGCTCCCTGGCATGCCTGCCCTAGAATTGTTATGTTGGGCATCACAGTCATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000094154.6 ENSMUST00000169437.9 ENSMUST00000207849.2 ENSMUST00000208119.2 |
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| CDS-3UTR GCA 90 bp | CATGACTGTGATGCCCAACATAACAATTCTAGGGCAGGCATGCCAGGGAGCCCCGCGACAGCCTTCTTCTaGATCTTTCCCATCCAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: HDCDAQHNNSRAGMPGSPATAFF*IFPIQA Trigger: GGCCTGGATGGGAAAGATGCAGAAGAAGGCTGTCGC...GGGGCTCCCTGGCATGCCTGCCCTAGAATTGTTATGTTGGGCATCACAGTCATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000094154.6 ENSMUST00000169437.9 ENSMUST00000207849.2 ENSMUST00000208119.2 |
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| CDS-3UTR CCA 90 bp | AAAGTTCATGACTGTGATGCCCAACATAACAATTCTAGGGCAGGCATGCCAGGGCCTCCACCACGCCCTTaGGCAGGGAGATGGCGACAG | + |
|
Preference number: 4 (lower is better) Translates to: KVHDCDAQHNNSRAGMPGPPPRP*AGRWRQ Trigger: CTGTCGCCATCTCCCTGCCCAAGGGCGTGGTGGAGG...CCCTGGCATGCCTGCCCTAGAATTGTTATGTTGGGCATCACAGTCATGAACTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000094154.6 ENSMUST00000169437.9 ENSMUST00000207849.2 ENSMUST00000208119.2 |
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| CDS-3UTR CCA 90 bp | CATGACTGTGATGCCCAACATAACAATTCTAGGGCAGGCATGCCAGGGAGCCCCCCCACTCGAAGGCAGTaGCATGGAACACACTGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: HDCDAQHNNSRAGMPGSPPTRRQ*HGTHWL Trigger: TAGCCAGTGTGTTCCATGCCACTGCCTTCGAGTGGG...GGGGCTCCCTGGCATGCCTGCCCTAGAATTGTTATGTTGGGCATCACAGTCATG 56% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 4 transcripts: ENSMUST00000094154.6 ENSMUST00000169437.9 ENSMUST00000207849.2 ENSMUST00000208119.2 |
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| CDS-3UTR CCA 90 bp | CATGACTGTGATGCCCAACATAACAATTCTAGGGCAGGCATGCCAGGGAGCCCCTCGAAGGCAGTGGCATaGAACACACTGGCTAGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: HDCDAQHNNSRAGMPGSPSKAVA*NTLARY Trigger: GTACCTAGCCAGTGTGTTCCATGCCACTGCCTTCGA...GGGGCTCCCTGGCATGCCTGCCCTAGAATTGTTATGTTGGGCATCACAGTCATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000094154.6 ENSMUST00000169437.9 ENSMUST00000207849.2 ENSMUST00000208119.2 |
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| CDS-3UTR TCA 90 bp | AAAGTTCATGACTGTGATGCCCAACATAACAATTCTAGGGCAGGCATGCCAGGGTCGCCTGATATAGGCTaGAGGCCAGGCCTGTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: KVHDCDAQHNNSRAGMPGSPDIG*RPGLCC Trigger: GCAGCACAGGCCTGGCCTTCAGCCTATATCAGGCGA...CCCTGGCATGCCTGCCCTAGAATTGTTATGTTGGGCATCACAGTCATGAACTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000094154.6 ENSMUST00000169437.9 ENSMUST00000207849.2 ENSMUST00000208119.2 |
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| CDS-3UTR TCA 90 bp | AAAGTTCATGACTGTGATGCCCAACATAACAATTCTAGGGCAGGCATGCCAGGGAGGAGCGGGTCACCATaGAGCCACGGTTGTCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: KVHDCDAQHNNSRAGMPGRSGSP*SHGCPP Trigger: TGGTGGACAACCGTGGCTTCATGGTGACCCGCTCCT...CCCTGGCATGCCTGCCCTAGAATTGTTATGTTGGGCATCACAGTCATGAACTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000094154.6 ENSMUST00000169437.9 ENSMUST00000207849.2 ENSMUST00000208119.2 |
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| CDS-3UTR CCA 90 bp | GCCCAACATAACAATTCTAGGGCAGGCATGCCAGGGAGCCCCTCCCATGCACTGCTTCTCATCCCAGTGTaGCTTAAAGAACATGGCGTT | + |
|
Preference number: 4 (lower is better) Translates to: AQHNNSRAGMPGSPSHALLLIPV*LKEHGV Trigger: AACGCCATGTTCTTTAAGCCACACTGGGATGAGAAG...CAGTGCATGGGAGGGGCTCCCTGGCATGCCTGCCCTAGAATTGTTATGTTGGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000094154.6 ENSMUST00000169437.9 ENSMUST00000207849.2 ENSMUST00000208119.2 |
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| CDS-3UTR CCA 90 bp | CCCCTCCCATGCACTGTCTCCCAGCTCCCACCGCTGGGCAAGGATCATTTTAAGCTTCTCATCCCAGTGTaGCTTAAAGAACATGGCGTT | + |
|
Preference number: 4 (lower is better) Translates to: PLPCTVSQLPPLGKDHFKLLIPV*LKEHGV Trigger: AACGCCATGTTCTTTAAGCCACACTGGGATGAGAAG...CTTAAAATGATCCTTGCCCAGCGGTGGGAGCTGGGAGACAGTGCATGGGAGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000094154.6 ENSMUST00000169437.9 ENSMUST00000207849.2 ENSMUST00000208119.2 |
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| CDS-3UTR CCA 90 bp | AAAGTTCATGACTGTGATGCCCAACATAACAATTCTAGGGCAGGCATGCCAGGGCCACCGCCTGGTCTTTaGCCATCGCCTGATATAGGC | + |
|
Preference number: 4 (lower is better) Translates to: KVHDCDAQHNNSRAGMPGPPPGL*PSPDIG Trigger: GCCTATATCAGGCGATGGCCAAAGACCAGGCGGTGG...CCCTGGCATGCCTGCCCTAGAATTGTTATGTTGGGCATCACAGTCATGAACTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000094154.6 ENSMUST00000169437.9 ENSMUST00000207849.2 ENSMUST00000208119.2 |
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| CDS-3UTR CCA 90 bp | AAAGTTCATGACTGTGATGCCCAACATAACAATTCTAGGGCAGGCATGCCAGGGCCTTGGGCAGGGAGATaGCGACAGCCTTCTTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: KVHDCDAQHNNSRAGMPGPWAGR*RQPSSA Trigger: TGCAGAAGAAGGCTGTCGCCATCTCCCTGCCCAAGG...CCCTGGCATGCCTGCCCTAGAATTGTTATGTTGGGCATCACAGTCATGAACTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000094154.6 ENSMUST00000169437.9 ENSMUST00000207849.2 ENSMUST00000208119.2 |
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| CDS-3UTR CCA 90 bp | AGTGGATTCTGTCTAAAAATACCCACTCAGACATATGGGAATTCCGATCTGCACCCTCCACCACGCCCTTaGGCAGGGAGATGGCGACAG | + |
|
Preference number: 4 (lower is better) Translates to: SGFCLKIPTQTYGNSDLHPPPRP*AGRWRQ Trigger: CTGTCGCCATCTCCCTGCCCAAGGGCGTGGTGGAGG...GTGCAGATCGGAATTCCCATATGTCTGAGTGGGTATTTTTAGACAGAATCCACT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000094154.6 ENSMUST00000169437.9 ENSMUST00000207849.2 ENSMUST00000208119.2 |
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| CDS-3UTR GCA 90 bp | AGTGGATTCTGTCTAAAAATACCCACTCAGACATATGGGAATTCCGATCTGCACCTCAGCGCTCAGCACTaGCTTCGCCTGCGACGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: SGFCLKIPTQTYGNSDLHLSAQH*LRLRRC Trigger: ACAGCGTCGCAGGCGAAGGCAGTGCTGAGCGCTGAG...GTGCAGATCGGAATTCCCATATGTCTGAGTGGGTATTTTTAGACAGAATCCACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000094154.6 ENSMUST00000169437.9 ENSMUST00000207849.2 ENSMUST00000208119.2 |
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| CDS-3UTR CCA 90 bp | CATGACTGTGATGCCCAACATAACAATTCTAGGGCAGGCATGCCAGGGAGCCCCCTTCTCATCCCAGTGTaGCTTAAAGAACATGGCGTT | + |
|
Preference number: 4 (lower is better) Translates to: HDCDAQHNNSRAGMPGSPLLIPV*LKEHGV Trigger: AACGCCATGTTCTTTAAGCCACACTGGGATGAGAAG...GGGGCTCCCTGGCATGCCTGCCCTAGAATTGTTATGTTGGGCATCACAGTCATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000094154.6 ENSMUST00000169437.9 ENSMUST00000207849.2 ENSMUST00000208119.2 |
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| CDS-3UTR CCA 90 bp | AAAGTTCATGACTGTGATGCCCAACATAACAATTCTAGGGCAGGCATGCCAGGGCCTTCAGCTGCTCCTTaGTCAGCAGCTTCTCCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: KVHDCDAQHNNSRAGMPGPSAAP*SAASPS Trigger: GCTTGGAGAAGCTGCTGACCAAGGAGCAGCTGAAGG...CCCTGGCATGCCTGCCCTAGAATTGTTATGTTGGGCATCACAGTCATGAACTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000094154.6 ENSMUST00000169437.9 ENSMUST00000207849.2 ENSMUST00000208119.2 |
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| CDS-3UTR CCA 90 bp | AAAGTTCATGACTGTGATGCCCAACATAACAATTCTAGGGCAGGCATGCCAGGGCCCACTCGAAGGCAGTaGCATGGAACACACTGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: KVHDCDAQHNNSRAGMPGPTRRQ*HGTHWL Trigger: TAGCCAGTGTGTTCCATGCCACTGCCTTCGAGTGGG...CCCTGGCATGCCTGCCCTAGAATTGTTATGTTGGGCATCACAGTCATGAACTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000094154.6 ENSMUST00000169437.9 ENSMUST00000207849.2 ENSMUST00000208119.2 |
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| CDS-3UTR GCA 90 bp | AAAGTTCATGACTGTGATGCCCAACATAACAATTCTAGGGCAGGCATGCCAGGGGGTACAGGTCCTTCTTaGCAGACATGCGCGATAGGT | + |
|
Preference number: 4 (lower is better) Translates to: KVHDCDAQHNNSRAGMPGGTGPS*QTCAIG Trigger: ACCTATCGCGCATGTCTGGCAAGAAGGACCTGTACC...CCCTGGCATGCCTGCCCTAGAATTGTTATGTTGGGCATCACAGTCATGAACTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000094154.6 ENSMUST00000169437.9 ENSMUST00000207849.2 ENSMUST00000208119.2 |
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| CDS-3UTR CCA 90 bp | CTTGTACAAACTGTTCTCGTTTTGAAAGCAACAAAGGCTCATATTTCCCTTCCCTCGCCTGCGACGCTGTaGTGGCTTTACCACCCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: LVQTVLVLKATKAHISLPSPATL*WLYHPV Trigger: CACTGGGTGGTAAAGCCACCACAGCGTCGCAGGCGA...GGGAAGGGAAATATGAGCCTTTGTTGCTTTCAAAACGAGAACAGTTTGTACAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000094154.6 ENSMUST00000169437.9 ENSMUST00000207849.2 ENSMUST00000208119.2 |
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| CDS-3UTR CCA 90 bp | AGTGGATTCTGTCTAAAAATACCCACTCAGACATATGGGAATTCCGATCTGCACCCTTGGGCAGGGAGATaGCGACAGCCTTCTTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: SGFCLKIPTQTYGNSDLHPWAGR*RQPSSA Trigger: TGCAGAAGAAGGCTGTCGCCATCTCCCTGCCCAAGG...GTGCAGATCGGAATTCCCATATGTCTGAGTGGGTATTTTTAGACAGAATCCACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000094154.6 ENSMUST00000169437.9 ENSMUST00000207849.2 ENSMUST00000208119.2 |
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| CDS-3UTR TCA 90 bp | AGTGGATTCTGTCTAAAAATACCCACTCAGACATATGGGAATTCCGATCTGCACAGCAAGGAGCCGCTCTaGTTATCTCGCACCAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SGFCLKIPTQTYGNSDLHSKEPL*LSRTRK Trigger: CTTCCTGGTGCGAGATAATCAGAGCGGCTCCTTGCT...GTGCAGATCGGAATTCCCATATGTCTGAGTGGGTATTTTTAGACAGAATCCACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000094154.6 ENSMUST00000169437.9 ENSMUST00000207849.2 ENSMUST00000208119.2 |
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| CDS-3UTR GCA 90 bp | AGTGGATTCTGTCTAAAAATACCCACTCAGACATATGGGAATTCCGATCTGCACCCAAGAGGCATAAGGTaGCCAGAAGGAGAGAGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: SGFCLKIPTQTYGNSDLHPRGIR*PEGESA Trigger: TGCGCTCTCTCCTTCTGGGCACCTTATGCCTCTTGG...GTGCAGATCGGAATTCCCATATGTCTGAGTGGGTATTTTTAGACAGAATCCACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000094154.6 ENSMUST00000169437.9 ENSMUST00000207849.2 ENSMUST00000208119.2 |
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| CDS-3UTR GCA 90 bp | AGTGGATTCTGTCTAAAAATACCCACTCAGACATATGGGAATTCCGATCTGCACGCGACAGCCTTCTTCTaGATCTTTCCCATCCAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: SGFCLKIPTQTYGNSDLHATAFF*IFPIQA Trigger: GGCCTGGATGGGAAAGATGCAGAAGAAGGCTGTCGC...GTGCAGATCGGAATTCCCATATGTCTGAGTGGGTATTTTTAGACAGAATCCACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000094154.6 ENSMUST00000169437.9 ENSMUST00000207849.2 ENSMUST00000208119.2 |
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| CDS-3UTR GCA 90 bp | AGTGGATTCTGTCTAAAAATACCCACTCAGACATATGGGAATTCCGATCTGCACCCTGCCAGATGTTTCTaGAGGTCATGGGTCACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SGFCLKIPTQTYGNSDLHPARCF*RSWVTS Trigger: GGAGGTGACCCATGACCTGCAGAAACATCTGGCAGG...GTGCAGATCGGAATTCCCATATGTCTGAGTGGGTATTTTTAGACAGAATCCACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000094154.6 ENSMUST00000169437.9 ENSMUST00000207849.2 ENSMUST00000208119.2 |
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| CDS-3UTR CCA 90 bp | AGTGGATTCTGTCTAAAAATACCCACTCAGACATATGGGAATTCCGATCTGCACCCTTCAGCTGCTCCTTaGTCAGCAGCTTCTCCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: SGFCLKIPTQTYGNSDLHPSAAP*SAASPS Trigger: GCTTGGAGAAGCTGCTGACCAAGGAGCAGCTGAAGG...GTGCAGATCGGAATTCCCATATGTCTGAGTGGGTATTTTTAGACAGAATCCACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000094154.6 ENSMUST00000169437.9 ENSMUST00000207849.2 ENSMUST00000208119.2 |
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| CDS-3UTR CCA 90 bp | CTTGTACAAACTGTTCTCGTTTTGAAAGCAACAAAGGCTCATATTTCCCTTCCCCCTTGGGCAGGGAGATaGCGACAGCCTTCTTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LVQTVLVLKATKAHISLPPWAGR*RQPSSA Trigger: TGCAGAAGAAGGCTGTCGCCATCTCCCTGCCCAAGG...GGGAAGGGAAATATGAGCCTTTGTTGCTTTCAAAACGAGAACAGTTTGTACAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000094154.6 ENSMUST00000169437.9 ENSMUST00000207849.2 ENSMUST00000208119.2 |
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| CDS-3UTR TCA 90 bp | CTTGTACAAACTGTTCTCGTTTTGAAAGCAACAAAGGCTCATATTTCCCTTCCCAGCAAGGAGCCGCTCTaGTTATCTCGCACCAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LVQTVLVLKATKAHISLPSKEPL*LSRTRK Trigger: CTTCCTGGTGCGAGATAATCAGAGCGGCTCCTTGCT...GGGAAGGGAAATATGAGCCTTTGTTGCTTTCAAAACGAGAACAGTTTGTACAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000094154.6 ENSMUST00000169437.9 ENSMUST00000207849.2 ENSMUST00000208119.2 |
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| CDS-3UTR GCA 90 bp | CTTGTACAAACTGTTCTCGTTTTGAAAGCAACAAAGGCTCATATTTCCCTTCCCCCAAGAGGCATAAGGTaGCCAGAAGGAGAGAGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: LVQTVLVLKATKAHISLPPRGIR*PEGESA Trigger: TGCGCTCTCTCCTTCTGGGCACCTTATGCCTCTTGG...GGGAAGGGAAATATGAGCCTTTGTTGCTTTCAAAACGAGAACAGTTTGTACAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000094154.6 ENSMUST00000169437.9 ENSMUST00000207849.2 ENSMUST00000208119.2 |
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| CDS-3UTR GCA 90 bp | CTTGTACAAACTGTTCTCGTTTTGAAAGCAACAAAGGCTCATATTTCCCTTCCCCCTGCCAGATGTTTCTaGAGGTCATGGGTCACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LVQTVLVLKATKAHISLPPARCF*RSWVTS Trigger: GGAGGTGACCCATGACCTGCAGAAACATCTGGCAGG...GGGAAGGGAAATATGAGCCTTTGTTGCTTTCAAAACGAGAACAGTTTGTACAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000094154.6 ENSMUST00000169437.9 ENSMUST00000207849.2 ENSMUST00000208119.2 |
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| CDS-3UTR GCA 90 bp | AGTGGATTCTGTCTAAAAATACCCACTCAGACATATGGGAATTCCGATCTGCACGGTACAGGTCCTTCTTaGCAGACATGCGCGATAGGT | + |
|
Preference number: 4 (lower is better) Translates to: SGFCLKIPTQTYGNSDLHGTGPS*QTCAIG Trigger: ACCTATCGCGCATGTCTGGCAAGAAGGACCTGTACC...GTGCAGATCGGAATTCCCATATGTCTGAGTGGGTATTTTTAGACAGAATCCACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000094154.6 ENSMUST00000169437.9 ENSMUST00000207849.2 ENSMUST00000208119.2 |
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| CDS-3UTR CCA 90 bp | CTTGTACAAACTGTTCTCGTTTTGAAAGCAACAAAGGCTCATATTTCCCTTCCCTCGAAGGCAGTGGCATaGAACACACTGGCTAGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: LVQTVLVLKATKAHISLPSKAVA*NTLARY Trigger: GTACCTAGCCAGTGTGTTCCATGCCACTGCCTTCGA...GGGAAGGGAAATATGAGCCTTTGTTGCTTTCAAAACGAGAACAGTTTGTACAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000094154.6 ENSMUST00000169437.9 ENSMUST00000207849.2 ENSMUST00000208119.2 |
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| CDS-3UTR CAA 90 bp | GGAGCCCCTCCCATGCACTGTCTCCCAGCTCCCACCGCTGGGCAAGGATCATTTGTGACCTCAGGCAGCTaGCCGTCCGTGGTCTGCGAG | + |
|
Preference number: 5 (lower is better) Translates to: GAPPMHCLPAPTAGQGSFVTSGS*PSVVCE Trigger: CTCGCAGACCACGGACGGCAAGCTGCCTGAGGTCAC...AAATGATCCTTGCCCAGCGGTGGGAGCTGGGAGACAGTGCATGGGAGGGGCTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000094154.6 ENSMUST00000169437.9 ENSMUST00000207849.2 ENSMUST00000208119.2 |
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| CDS-3UTR CAA 90 bp | GCCCAACATAACAATTCTAGGGCAGGCATGCCAGGGAGCCCCTCCCATGCACTGGTGACCTCAGGCAGCTaGCCGTCCGTGGTCTGCGAG | + |
|
Preference number: 5 (lower is better) Translates to: AQHNNSRAGMPGSPSHALVTSGS*PSVVCE Trigger: CTCGCAGACCACGGACGGCAAGCTGCCTGAGGTCAC...CAGTGCATGGGAGGGGCTCCCTGGCATGCCTGCCCTAGAATTGTTATGTTGGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000094154.6 ENSMUST00000169437.9 ENSMUST00000207849.2 ENSMUST00000208119.2 |
||
| CDS-3UTR CAA 90 bp | GGAGCCCCTCCCATGCACTGTCTCCCAGCTCCCACCGCTGGGCAAGGATCATTTGTGCGCTCCACATCCTaGGTGACCTCAGGCAGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: GAPPMHCLPAPTAGQGSFVRSTS*VTSGSL Trigger: CAAGCTGCCTGAGGTCACCAAGGATGTGGAGCGCAC...AAATGATCCTTGCCCAGCGGTGGGAGCTGGGAGACAGTGCATGGGAGGGGCTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000094154.6 ENSMUST00000169437.9 ENSMUST00000207849.2 ENSMUST00000208119.2 |
||
| CDS-3UTR CAA 90 bp | GGAGCCCCTCCCATGCACTGTCTCCCAGCTCCCACCGCTGGGCAAGGATCATTTGCGCCCGTAGATGTCTaGGTCAAAGGGGTTGCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: GAPPMHCLPAPTAGQGSFAPVDV*VKGVAL Trigger: GAGGGCAACCCCTTTGACCAAGACATCTACGGGCGC...AAATGATCCTTGCCCAGCGGTGGGAGCTGGGAGACAGTGCATGGGAGGGGCTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000094154.6 ENSMUST00000169437.9 ENSMUST00000207849.2 ENSMUST00000208119.2 |
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| CDS-3UTR CAA 90 bp | GGAGCCCCTCCCATGCACTGTCTCCCAGCTCCCACCGCTGGGCAAGGATCATTTAGGTCTGCCTTGTTCTaGTCGATGGCCTCGGTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: GAPPMHCLPAPTAGQGSFRSALF*SMASVR Trigger: CCTGACCGAGGCCATCGACAAGAACAAGGCAGACCT...AAATGATCCTTGCCCAGCGGTGGGAGCTGGGAGACAGTGCATGGGAGGGGCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000094154.6 ENSMUST00000169437.9 ENSMUST00000207849.2 ENSMUST00000208119.2 |
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| CDS GCA 90 bp | ATGGCGACAGCCTTCTTCTGCATCTTTCCCATCCAGGCCTTCAGCTaGTCCTTGGTCAGCAGCTTCTCCAAGCGCTCGAGCGGCTCCACG | + |
|
Preference number: 5 (lower is better) Translates to: MATAFFCIFPIQAFS*SLVSSFSKRSSGST Trigger: CGTGGAGCCGCTCGAGCGCTTGGAGAAGCTGCTGACCAAGGAGCAGCTGAAGGCCTGGATGGGAAAGATGCAGAAGAAGGCTGTCGCCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000094154.6 ENSMUST00000169437.9 ENSMUST00000207849.2 ENSMUST00000208119.2 |
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| CDS-3UTR CAA 90 bp | GCCCAACATAACAATTCTAGGGCAGGCATGCCAGGGAGCCCCTCCCATGCACTGGTGCGCTCCACATCCTaGGTGACCTCAGGCAGCTTG | + |
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Preference number: 5 (lower is better) Translates to: AQHNNSRAGMPGSPSHALVRSTS*VTSGSL Trigger: CAAGCTGCCTGAGGTCACCAAGGATGTGGAGCGCAC...CAGTGCATGGGAGGGGCTCCCTGGCATGCCTGCCCTAGAATTGTTATGTTGGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000094154.6 ENSMUST00000169437.9 ENSMUST00000207849.2 ENSMUST00000208119.2 |
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| CDS-3UTR CAA 90 bp | GGAGCCCCTCCCATGCACTGTCTCCCAGCTCCCACCGCTGGGCAAGGATCATTTAGGTACAGGTCCTTCTaGCCAGACATGCGCGATAGG | + |
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Preference number: 5 (lower is better) Translates to: GAPPMHCLPAPTAGQGSFRYRSF*PDMRDR Trigger: CCTATCGCGCATGTCTGGCAAGAAGGACCTGTACCT...AAATGATCCTTGCCCAGCGGTGGGAGCTGGGAGACAGTGCATGGGAGGGGCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000094154.6 ENSMUST00000169437.9 ENSMUST00000207849.2 ENSMUST00000208119.2 |
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| CDS-3UTR CAA 90 bp | GCCCAACATAACAATTCTAGGGCAGGCATGCCAGGGAGCCCCTCCCATGCACTGGCGCCCGTAGATGTCTaGGTCAAAGGGGTTGCCCTC | + |
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Preference number: 5 (lower is better) Translates to: AQHNNSRAGMPGSPSHALAPVDV*VKGVAL Trigger: GAGGGCAACCCCTTTGACCAAGACATCTACGGGCGC...CAGTGCATGGGAGGGGCTCCCTGGCATGCCTGCCCTAGAATTGTTATGTTGGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000094154.6 ENSMUST00000169437.9 ENSMUST00000207849.2 ENSMUST00000208119.2 |
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| CDS-3UTR CAA 90 bp | CCCCTCCCATGCACTGTCTCCCAGCTCCCACCGCTGGGCAAGGATCATTTTAAGTGCAGGGCGCTGCGCTaGTCTCGGAAGTTGATCTTG | + |
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Preference number: 5 (lower is better) Translates to: PLPCTVSQLPPLGKDHFKCRALR*SRKLIL Trigger: CAAGATCAACTTCCGAGACAAGCGCAGCGCCCTGCA...CTTAAAATGATCCTTGCCCAGCGGTGGGAGCTGGGAGACAGTGCATGGGAGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000094154.6 ENSMUST00000169437.9 ENSMUST00000207849.2 ENSMUST00000208119.2 |
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| CDS-3UTR CAA 90 bp | CCCCTCCCATGCACTGTCTCCCAGCTCCCACCGCTGGGCAAGGATCATTTTAAGGCCTTCAGCTGCTCCTaGGTCAGCAGCTTCTCCAAG | + |
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Preference number: 5 (lower is better) Translates to: PLPCTVSQLPPLGKDHFKAFSCS*VSSFSK Trigger: CTTGGAGAAGCTGCTGACCAAGGAGCAGCTGAAGGC...CTTAAAATGATCCTTGCCCAGCGGTGGGAGCTGGGAGACAGTGCATGGGAGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000094154.6 ENSMUST00000169437.9 ENSMUST00000207849.2 ENSMUST00000208119.2 |
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| CDS-3UTR CAA 90 bp | CCCCTCCCATGCACTGTCTCCCAGCTCCCACCGCTGGGCAAGGATCATTTTAAGAGGTCTGCCTTGTTCTaGTCGATGGCCTCGGTCAGG | + |
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Preference number: 5 (lower is better) Translates to: PLPCTVSQLPPLGKDHFKRSALF*SMASVR Trigger: CCTGACCGAGGCCATCGACAAGAACAAGGCAGACCT...CTTAAAATGATCCTTGCCCAGCGGTGGGAGCTGGGAGACAGTGCATGGGAGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000094154.6 ENSMUST00000169437.9 ENSMUST00000207849.2 ENSMUST00000208119.2 |
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| CDS-3UTR CAA 90 bp | ACAGGAAGACTGAAGAGGGCTCGGGGCAAGGTGACAAAAAGAGCTAGGCTGCCCTCTTGGTCAAAGGGGTaGCCCTCGGTGTCCCACTCG | + |
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Preference number: 5 (lower is better) Translates to: TGRLKRARGKVTKRARLPSWSKG*PSVSHS Trigger: CGAGTGGGACACCGAGGGCAACCCCTTTGACCAAGA...GGGCAGCCTAGCTCTTTTTGTCACCTTGCCCCGAGCCCTCTTCAGTCTTCCTGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000094154.6 ENSMUST00000169437.9 ENSMUST00000207849.2 ENSMUST00000208119.2 |
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| CDS-3UTR CAA 90 bp | ACAGGAAGACTGAAGAGGGCTCGGGGCAAGGTGACAAAAAGAGCTAGGCTGCCCGCGCCCGTAGATGTCTaGGTCAAAGGGGTTGCCCTC | + |
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Preference number: 5 (lower is better) Translates to: TGRLKRARGKVTKRARLPAPVDV*VKGVAL Trigger: GAGGGCAACCCCTTTGACCAAGACATCTACGGGCGC...GGGCAGCCTAGCTCTTTTTGTCACCTTGCCCCGAGCCCTCTTCAGTCTTCCTGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000094154.6 ENSMUST00000169437.9 ENSMUST00000207849.2 ENSMUST00000208119.2 |
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| CDS-3UTR CAA 90 bp | ACAGGAAGACTGAAGAGGGCTCGGGGCAAGGTGACAAAAAGAGCTAGGCTGCCCGCCTTCAGCTGCTCCTaGGTCAGCAGCTTCTCCAAG | + |
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Preference number: 5 (lower is better) Translates to: TGRLKRARGKVTKRARLPAFSCS*VSSFSK Trigger: CTTGGAGAAGCTGCTGACCAAGGAGCAGCTGAAGGC...GGGCAGCCTAGCTCTTTTTGTCACCTTGCCCCGAGCCCTCTTCAGTCTTCCTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000094154.6 ENSMUST00000169437.9 ENSMUST00000207849.2 ENSMUST00000208119.2 |
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| CDS-3UTR CAA 90 bp | CATGACTGTGATGCCCAACATAACAATTCTAGGGCAGGCATGCCAGGGAGCCCCGCCTTCAGCTGCTCCTaGGTCAGCAGCTTCTCCAAG | + |
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Preference number: 5 (lower is better) Translates to: HDCDAQHNNSRAGMPGSPAFSCS*VSSFSK Trigger: CTTGGAGAAGCTGCTGACCAAGGAGCAGCTGAAGGC...GGGGCTCCCTGGCATGCCTGCCCTAGAATTGTTATGTTGGGCATCACAGTCATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000094154.6 ENSMUST00000169437.9 ENSMUST00000207849.2 ENSMUST00000208119.2 |
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| CDS-3UTR CAA 90 bp | AAAGTTCATGACTGTGATGCCCAACATAACAATTCTAGGGCAGGCATGCCAGGGGTGCGCTCCACATCCTaGGTGACCTCAGGCAGCTTG | + |
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Preference number: 5 (lower is better) Translates to: KVHDCDAQHNNSRAGMPGVRSTS*VTSGSL Trigger: CAAGCTGCCTGAGGTCACCAAGGATGTGGAGCGCAC...CCCTGGCATGCCTGCCCTAGAATTGTTATGTTGGGCATCACAGTCATGAACTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000094154.6 ENSMUST00000169437.9 ENSMUST00000207849.2 ENSMUST00000208119.2 |
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| CDS-3UTR CAA 90 bp | AAAGTTCATGACTGTGATGCCCAACATAACAATTCTAGGGCAGGCATGCCAGGGTCTTGGTCAAAGGGGTaGCCCTCGGTGTCCCACTCG | + |
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Preference number: 5 (lower is better) Translates to: KVHDCDAQHNNSRAGMPGSWSKG*PSVSHS Trigger: CGAGTGGGACACCGAGGGCAACCCCTTTGACCAAGA...CCCTGGCATGCCTGCCCTAGAATTGTTATGTTGGGCATCACAGTCATGAACTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000094154.6 ENSMUST00000169437.9 ENSMUST00000207849.2 ENSMUST00000208119.2 |
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| CDS-3UTR CAA 90 bp | AAAGTTCATGACTGTGATGCCCAACATAACAATTCTAGGGCAGGCATGCCAGGGAGGTCTGCCTTGTTCTaGTCGATGGCCTCGGTCAGG | + |
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Preference number: 5 (lower is better) Translates to: KVHDCDAQHNNSRAGMPGRSALF*SMASVR Trigger: CCTGACCGAGGCCATCGACAAGAACAAGGCAGACCT...CCCTGGCATGCCTGCCCTAGAATTGTTATGTTGGGCATCACAGTCATGAACTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000094154.6 ENSMUST00000169437.9 ENSMUST00000207849.2 ENSMUST00000208119.2 |
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| CDS-3UTR CAA 90 bp | AGTGGATTCTGTCTAAAAATACCCACTCAGACATATGGGAATTCCGATCTGCACTCTTGGTCAAAGGGGTaGCCCTCGGTGTCCCACTCG | + |
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Preference number: 5 (lower is better) Translates to: SGFCLKIPTQTYGNSDLHSWSKG*PSVSHS Trigger: CGAGTGGGACACCGAGGGCAACCCCTTTGACCAAGA...GTGCAGATCGGAATTCCCATATGTCTGAGTGGGTATTTTTAGACAGAATCCACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000094154.6 ENSMUST00000169437.9 ENSMUST00000207849.2 ENSMUST00000208119.2 |
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| CDS-3UTR CAA 90 bp | AGTGGATTCTGTCTAAAAATACCCACTCAGACATATGGGAATTCCGATCTGCACTGCAGGGCGCTGCGCTaGTCTCGGAAGTTGATCTTG | + |
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Preference number: 5 (lower is better) Translates to: SGFCLKIPTQTYGNSDLHCRALR*SRKLIL Trigger: CAAGATCAACTTCCGAGACAAGCGCAGCGCCCTGCA...GTGCAGATCGGAATTCCCATATGTCTGAGTGGGTATTTTTAGACAGAATCCACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000094154.6 ENSMUST00000169437.9 ENSMUST00000207849.2 ENSMUST00000208119.2 |
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| CDS-3UTR CAA 90 bp | CTTGTACAAACTGTTCTCGTTTTGAAAGCAACAAAGGCTCATATTTCCCTTCCCGTGCGCTCCACATCCTaGGTGACCTCAGGCAGCTTG | + |
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Preference number: 5 (lower is better) Translates to: LVQTVLVLKATKAHISLPVRSTS*VTSGSL Trigger: CAAGCTGCCTGAGGTCACCAAGGATGTGGAGCGCAC...GGGAAGGGAAATATGAGCCTTTGTTGCTTTCAAAACGAGAACAGTTTGTACAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000094154.6 ENSMUST00000169437.9 ENSMUST00000207849.2 ENSMUST00000208119.2 |
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| CDS-3UTR CAA 90 bp | CTTGTACAAACTGTTCTCGTTTTGAAAGCAACAAAGGCTCATATTTCCCTTCCCGCGCCCGTAGATGTCTaGGTCAAAGGGGTTGCCCTC | + |
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Preference number: 5 (lower is better) Translates to: LVQTVLVLKATKAHISLPAPVDV*VKGVAL Trigger: GAGGGCAACCCCTTTGACCAAGACATCTACGGGCGC...GGGAAGGGAAATATGAGCCTTTGTTGCTTTCAAAACGAGAACAGTTTGTACAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000094154.6 ENSMUST00000169437.9 ENSMUST00000207849.2 ENSMUST00000208119.2 |
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| CDS-3UTR CAA 90 bp | CTTGTACAAACTGTTCTCGTTTTGAAAGCAACAAAGGCTCATATTTCCCTTCCCTGCAGGGCGCTGCGCTaGTCTCGGAAGTTGATCTTG | + |
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Preference number: 5 (lower is better) Translates to: LVQTVLVLKATKAHISLPCRALR*SRKLIL Trigger: CAAGATCAACTTCCGAGACAAGCGCAGCGCCCTGCA...GGGAAGGGAAATATGAGCCTTTGTTGCTTTCAAAACGAGAACAGTTTGTACAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000094154.6 ENSMUST00000169437.9 ENSMUST00000207849.2 ENSMUST00000208119.2 |
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| CDS-3UTR CAA 90 bp | CTTGTACAAACTGTTCTCGTTTTGAAAGCAACAAAGGCTCATATTTCCCTTCCCGCCTTCAGCTGCTCCTaGGTCAGCAGCTTCTCCAAG | + |
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Preference number: 5 (lower is better) Translates to: LVQTVLVLKATKAHISLPAFSCS*VSSFSK Trigger: CTTGGAGAAGCTGCTGACCAAGGAGCAGCTGAAGGC...GGGAAGGGAAATATGAGCCTTTGTTGCTTTCAAAACGAGAACAGTTTGTACAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000094154.6 ENSMUST00000169437.9 ENSMUST00000207849.2 ENSMUST00000208119.2 |
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| CDS-3UTR CAA 90 bp | CTTGTACAAACTGTTCTCGTTTTGAAAGCAACAAAGGCTCATATTTCCCTTCCCAGGTCTGCCTTGTTCTaGTCGATGGCCTCGGTCAGG | + |
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Preference number: 5 (lower is better) Translates to: LVQTVLVLKATKAHISLPRSALF*SMASVR Trigger: CCTGACCGAGGCCATCGACAAGAACAAGGCAGACCT...GGGAAGGGAAATATGAGCCTTTGTTGCTTTCAAAACGAGAACAGTTTGTACAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000094154.6 ENSMUST00000169437.9 ENSMUST00000207849.2 ENSMUST00000208119.2 |
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| CDS-3UTR CAA 90 bp | AGTGGATTCTGTCTAAAAATACCCACTCAGACATATGGGAATTCCGATCTGCACAGGTACAGGTCCTTCTaGCCAGACATGCGCGATAGG | + |
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Preference number: 5 (lower is better) Translates to: SGFCLKIPTQTYGNSDLHRYRSF*PDMRDR Trigger: CCTATCGCGCATGTCTGGCAAGAAGGACCTGTACCT...GTGCAGATCGGAATTCCCATATGTCTGAGTGGGTATTTTTAGACAGAATCCACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000094154.6 ENSMUST00000169437.9 ENSMUST00000207849.2 ENSMUST00000208119.2 |
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| CDS-3UTR CAA 90 bp | CTTGTACAAACTGTTCTCGTTTTGAAAGCAACAAAGGCTCATATTTCCCTTCCCAGGTACAGGTCCTTCTaGCCAGACATGCGCGATAGG | + |
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Preference number: 5 (lower is better) Translates to: LVQTVLVLKATKAHISLPRYRSF*PDMRDR Trigger: CCTATCGCGCATGTCTGGCAAGAAGGACCTGTACCT...GGGAAGGGAAATATGAGCCTTTGTTGCTTTCAAAACGAGAACAGTTTGTACAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000094154.6 ENSMUST00000169437.9 ENSMUST00000207849.2 ENSMUST00000208119.2 |
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| CDS GCA 72 bp | CACCTCCTCATCGCGCAGCTTCTCAGCGCTCAGCACTaGCTTCGCCTGCGACGCTGTGGTGGCTTTACCACC | + |
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Preference number: 6 (lower is better) Translates to: HLLIAQLLSAQH*LRLRRCGGFTT Trigger: GGTGGTAAAGCCACCACAGCGTCGCAGGCGAAGGCAGTGCTGAGCGCTGAGAAGCTGCGCGATGAGGAGGTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000094154.6 ENSMUST00000169437.9 ENSMUST00000207849.2 ENSMUST00000207989.2 ENSMUST00000208119.2 ENSMUST00000208749.2 |
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| CDS GCA 72 bp | GCTCCTCGCGCCCGTAGATGTCTTGGTCAAAGGGGTTaGCCTCGGTGTCCCACTCGAAGGCAGTGGCATGGA | + |
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Preference number: 6 (lower is better) Translates to: APRARRCLGQRG*PRCPTRRQWHG Trigger: TCCATGCCACTGCCTTCGAGTGGGACACCGAGGGCAACCCCTTTGACCAAGACATCTACGGGCGCGAGGAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000094154.6 ENSMUST00000169437.9 ENSMUST00000207849.2 ENSMUST00000208119.2 |
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| CDS CCA 72 bp | CATGGGTCACCTCCACCACGCCCTTGGGCAGGGAGATaGCGACAGCCTTCTTCTGCATCTTTCCCATCCAGG | + |
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Preference number: 6 (lower is better) Translates to: HGSPPPRPWAGR*RQPSSASFPSR Trigger: CCTGGATGGGAAAGATGCAGAAGAAGGCTGTCGCCATCTCCCTGCCCAAGGGCGTGGTGGAGGTGACCCATG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000094154.6 ENSMUST00000169437.9 ENSMUST00000207849.2 ENSMUST00000208119.2 |
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| CDS GCA 72 bp | GCCTTCTTCTGCATCTTTCCCATCCAGGCCTTCAGCTaGTCCTTGGTCAGCAGCTTCTCCAAGCGCTCGAGC | + |
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Preference number: 6 (lower is better) Translates to: AFFCIFPIQAFS*SLVSSFSKRSS Trigger: GCTCGAGCGCTTGGAGAAGCTGCTGACCAAGGAGCAGCTGAAGGCCTGGATGGGAAAGATGCAGAAGAAGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000094154.6 ENSMUST00000169437.9 ENSMUST00000207849.2 ENSMUST00000208119.2 |
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