Pregenerated sensors for SERPING1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000023224Ensembl transcript IDs: ENSMUST00000023994.10, ENSMUST00000111641.2
Found 144 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTTCCACCCCTGACTCTGTCAGTTCCAGCACTGTCTCGTGTTTCATaGCAGACACCTGAAGATCTGGGTCCTCGGTCAGCCCGCACAGGT | + |
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Preference number: 1 (lower is better) Translates to: LPPLTLSVPALSRVS*QTPEDLGPRSARTG Trigger: ACCTGTGCGGGCTGACCGAGGACCCAGATCTTCAGGTGTCTGCCATGAAACACGAGACAGTGCTGGAACTGACAGAGTCAGGGGTGGAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111641.2 |
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| 3UTR CCA 90 bp | GCTGGTCCCAGAGCAGGAAGAGGAAAGGTCGCTGCACCTCAAAGATaGGTAAGCTTCGGCCAAAGGAGATGGCAGAGGCTGCAGCTGCTT | + |
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Preference number: 1 (lower is better) Translates to: AGPRAGRGKVAAPQR*VSFGQRRWQRLQLL Trigger: AAGCAGCTGCAGCCTCTGCCATCTCCTTTGGCCGAAGCTTACCCATCTTTGAGGTGCAGCGACCTTTCCTCTTCCTGCTCTGGGACCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111641.2 |
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| 3UTR GCA 90 bp | GGGAACCTGTGTTGCTGGTCCCAGAGCAGGAAGAGGAAAGGTCGCTaGACCTCAAAGATGGGTAAGCTTCGGCCAAAGGAGATGGCAGAG | + |
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Preference number: 1 (lower is better) Translates to: GNLCCWSQSRKRKGR*TSKMGKLRPKEMAE Trigger: CTCTGCCATCTCCTTTGGCCGAAGCTTACCCATCTTTGAGGTGCAGCGACCTTTCCTCTTCCTGCTCTGGGACCAGCAACACAGGTTCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111641.2 |
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| 3UTR GCA 90 bp | CCCCTGGGGTCATATACACGACCCATGAAGACTGGGAACCTGTGTTaGTGGTCCCAGAGCAGGAAGAGGAAAGGTCGCTGCACCTCAAAG | + |
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Preference number: 1 (lower is better) Translates to: PLGSYTRPMKTGNLC*WSQSRKRKGRCTSK Trigger: CTTTGAGGTGCAGCGACCTTTCCTCTTCCTGCTCTGGGACCAGCAACACAGGTTCCCAGTCTTCATGGGTCGTGTATATGACCCCAGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111641.2 |
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| 3UTR CCA 90 bp | AAGCCTGTCTCAACCCCTGGGGTCATATACACGACCCATGAAGACTaGGAACCTGTGTTGCTGGTCCCAGAGCAGGAAGAGGAAAGGTCG | + |
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Preference number: 1 (lower is better) Translates to: KPVSTPGVIYTTHED*EPVLLVPEQEEERS Trigger: CGACCTTTCCTCTTCCTGCTCTGGGACCAGCAACACAGGTTCCCAGTCTTCATGGGTCGTGTATATGACCCCAGGGGTTGAGACAGGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111641.2 |
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| 3UTR TCA 90 bp | TTTACCCAAGCCTGTCTCAACCCCTGGGGTCATATACACGACCCATaGAGACTGGGAACCTGTGTTGCTGGTCCCAGAGCAGGAAGAGGA | + |
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Preference number: 1 (lower is better) Translates to: FTQACLNPWGHIHDP*RLGTCVAGPRAGRG Trigger: TCCTCTTCCTGCTCTGGGACCAGCAACACAGGTTCCCAGTCTTCATGGGTCGTGTATATGACCCCAGGGGTTGAGACAGGCTTGGGTAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111641.2 |
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| 3UTR CCA 90 bp | CAGTTCCAGCACTGTCTCGTGTTTCATGGCAGACACCTGAAGATCTaGGTCCTCGGTCAGCCCGCACAGGTTGAGATCGTAAGTGAAGTC | + |
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Preference number: 1 (lower is better) Translates to: QFQHCLVFHGRHLKI*VLGQPAQVEIVSEV Trigger: GACTTCACTTACGATCTCAACCTGTGCGGGCTGACCGAGGACCCAGATCTTCAGGTGTCTGCCATGAAACACGAGACAGTGCTGGAACTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111641.2 |
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| 3UTR CCA 90 bp | CTGGGGTCATATACACGACCCATGAAGACTGGGAACCTGTGTTGCTaGTCCCAGAGCAGGAAGAGGAAAGGTCGCTGCACCTCAAAGATG | + |
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Preference number: 1 (lower is better) Translates to: LGSYTRPMKTGNLCC*SQSRKRKGRCTSKM Trigger: CATCTTTGAGGTGCAGCGACCTTTCCTCTTCCTGCTCTGGGACCAGCAACACAGGTTCCCAGTCTTCATGGGTCGTGTATATGACCCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111641.2 |
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| 3UTR-3UTR CCA 90 bp | AAAAAGTGGTTGATACCCTGGGGGTTGGTGGATGGAAACAGTTCCGTCTGCCAGGGCTCGGGCAGGCAGTaGCAAGGAAATAACCGGAGG | + |
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Preference number: 2 (lower is better) Translates to: KKWLIPWGLVDGNSSVCQGSGRQ*QGNNRR Trigger: CCTCCGGTTATTTCCTTGCCACTGCCTGCCCGAGCC...CTGGCAGACGGAACTGTTTCCATCCACCAACCCCCAGGGTATCAACCACTTTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000023994.10 |
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| 3UTR-3UTR CCA 90 bp | ACGACCCATGAAGACTGGGAACCTGTGTTGCTGGTCCCAGAGCAGGAAGAGGAATTCTGGTCTTGTCAGTaGGAAACCCTGCCAGGAGGC | + |
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Preference number: 2 (lower is better) Translates to: TTHEDWEPVLLVPEQEEEFWSCQ*ETLPGG Trigger: GCCTCCTGGCAGGGTTTCCCACTGACAAGACCAGAA...TTCCTCTTCCTGCTCTGGGACCAGCAACACAGGTTCCCAGTCTTCATGGGTCGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111641.2 |
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| 3UTR-3UTR TCA 90 bp | AAAAAGTGGTTGATACCCTGGGGGTTGGTGGATGGAAACAGTTCCGTCTGCCAGAATAACCGGAGGAGCTaGAGCTTGGGTGACAATGTT | + |
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Preference number: 2 (lower is better) Translates to: KKWLIPWGLVDGNSSVCQNNRRS*SLGDNV Trigger: AACATTGTCACCCAAGCTTCAGCTCCTCCGGTTATT...CTGGCAGACGGAACTGTTTCCATCCACCAACCCCCAGGGTATCAACCACTTTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000023994.10 |
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| 3UTR-3UTR TCA 90 bp | AGACACCTGAAGATCTGGGTCCTCGGTCAGCCCGCACAGGTTGAGATCGTAAGTCTGCTCTTAATTTCCTaGGTTAGTCTCAAATTCCCA | + |
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Preference number: 2 (lower is better) Translates to: RHLKIWVLGQPAQVEIVSLLLIS*VSLKFP Trigger: TGGGAATTTGAGACTAACTCAGGAAATTAAGAGCAG...ACTTACGATCTCAACCTGTGCGGGCTGACCGAGGACCCAGATCTTCAGGTGTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111641.2 |
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| 3UTR-3UTR CCA 90 bp | AGAAAAGCAAAATCAGACATCAGCAGGAAAGTCCTGGTGGGTGGAGATTCTGCTGGAGGAGCTGAAGCTTaGGTGACAATGTTTACCCAA | + |
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Preference number: 2 (lower is better) Translates to: RKAKSDISRKVLVGGDSAGGAEA*VTMFTQ Trigger: TTGGGTAAACATTGTCACCCAAGCTTCAGCTCCTCC...AGCAGAATCTCCACCCACCAGGACTTTCCTGCTGATGTCTGATTTTGCTTTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111641.2 |
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| 3UTR TCA 72 bp | AGTTCCAGCACTGTCTCGTGTTTCATGGCAGACACCTaGAGATCTGGGTCCTCGGTCAGCCCGCACAGGTTG | + |
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Preference number: 3 (lower is better) Translates to: SSSTVSCFMADT*RSGSSVSPHRL Trigger: CAACCTGTGCGGGCTGACCGAGGACCCAGATCTTCAGGTGTCTGCCATGAAACACGAGACAGTGCTGGAACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111641.2 |
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| 3UTR TCA 72 bp | GCCTGTCTCAACCCCTGGGGTCATATACACGACCCATaGAGACTGGGAACCTGTGTTGCTGGTCCCAGAGCA | + |
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Preference number: 3 (lower is better) Translates to: ACLNPWGHIHDP*RLGTCVAGPRA Trigger: TGCTCTGGGACCAGCAACACAGGTTCCCAGTCTTCATGGGTCGTGTATATGACCCCAGGGGTTGAGACAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111641.2 |
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| 3UTR GCA 72 bp | TGTTGCTGGTCCCAGAGCAGGAAGAGGAAAGGTCGCTaGACCTCAAAGATGGGTAAGCTTCGGCCAAAGGAG | + |
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Preference number: 3 (lower is better) Translates to: CCWSQSRKRKGR*TSKMGKLRPKE Trigger: CTCCTTTGGCCGAAGCTTACCCATCTTTGAGGTGCAGCGACCTTTCCTCTTCCTGCTCTGGGACCAGCAACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111641.2 |
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| 3UTR CCA 72 bp | AGAGCAGGAAGAGGAAAGGTCGCTGCACCTCAAAGATaGGTAAGCTTCGGCCAAAGGAGATGGCAGAGGCTG | + |
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Preference number: 3 (lower is better) Translates to: RAGRGKVAAPQR*VSFGQRRWQRL Trigger: CAGCCTCTGCCATCTCCTTTGGCCGAAGCTTACCCATCTTTGAGGTGCAGCGACCTTTCCTCTTCCTGCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111641.2 |
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| 3UTR CCA 72 bp | TCAACCCCTGGGGTCATATACACGACCCATGAAGACTaGGAACCTGTGTTGCTGGTCCCAGAGCAGGAAGAG | + |
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Preference number: 3 (lower is better) Translates to: STPGVIYTTHED*EPVLLVPEQEE Trigger: CTCTTCCTGCTCTGGGACCAGCAACACAGGTTCCCAGTCTTCATGGGTCGTGTATATGACCCCAGGGGTTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111641.2 |
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| 3UTR GCA 72 bp | TACATCATGCCTTCTGGTCTTGTCAGTGGGAAACCCTaGCAGGAGGCCCAACCGCCACTTTCAAGAAATGAG | + |
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Preference number: 3 (lower is better) Translates to: YIMPSGLVSGKP*QEAQPPLSRNE Trigger: CTCATTTCTTGAAAGTGGCGGTTGGGCCTCCTGGCAGGGTTTCCCACTGACAAGACCAGAAGGCATGATGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111641.2 |
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| CDS-3UTR GCA 90 bp | CATCATGCCTTCTGGTCTTGTCAGTGGGAAACCCTGCCAGGAGGCCCAACCGCCCCAGGACTCTGGGGCTaGTTCCATACAGGCTCTGAG | + |
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Preference number: 4 (lower is better) Translates to: HHAFWSCQWETLPGGPTAPGLWG*FHTGSE Trigger: CTCAGAGCCTGTATGGAAGCAGCCCCAGAGTCCTGG...GGCGGTTGGGCCTCCTGGCAGGGTTTCCCACTGACAAGACCAGAAGGCATGATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111641.2 |
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| CDS-3UTR TCA 90 bp | ACGACCCATGAAGACTGGGAACCTGTGTTGCTGGTCCCAGAGCAGGAAGAGGAACTGGGTGGGAAGATCTaGGGCAGTGGAGGGCTGGCT | + |
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Preference number: 4 (lower is better) Translates to: TTHEDWEPVLLVPEQEEELGGKI*GSGGLA Trigger: AGCCAGCCCTCCACTGCCTCAGATCTTCCCACCCAG...TTCCTCTTCCTGCTCTGGGACCAGCAACACAGGTTCCCAGTCTTCATGGGTCGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111641.2 |
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| CDS-3UTR CCA 90 bp | GGGGTCATATACACGACCCATGAAGACTGGGAACCTGTGTTGCTGGTCCCAGAGCTGGGCCCAGGACTCTaGGGCTGCTTCCATACAGGC | + |
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Preference number: 4 (lower is better) Translates to: GVIYTTHEDWEPVLLVPELGPGL*GCFHTG Trigger: GCCTGTATGGAAGCAGCCCCAGAGTCCTGGGCCCAG...CTCTGGGACCAGCAACACAGGTTCCCAGTCTTCATGGGTCGTGTATATGACCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111641.2 |
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| CDS-3UTR CCA 90 bp | CCTGTCTCAACCCCTGGGGTCATATACACGACCCATGAAGACTGGGAACCTGTGCGCTTGAGCCTCCAGTaGATCCTGGGTGCTGTGGCT | + |
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Preference number: 4 (lower is better) Translates to: PVSTPGVIYTTHEDWEPVRLSLQ*ILGAVA Trigger: AGCCACAGCACCCAGGATCCACTGGAGGCTCAAGCG...CACAGGTTCCCAGTCTTCATGGGTCGTGTATATGACCCCAGGGGTTGAGACAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111641.2 |
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| CDS-3UTR CCA 90 bp | ACCTCAAAGATGGGTAAGCTTCGGCCAAAGGAGATGGCAGAGGCTGCAGCTGCTGTTAGCAGCACTGTCTaGGCCCAGGACTCTGGGGCT | + |
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Preference number: 4 (lower is better) Translates to: TSKMGKLRPKEMAEAAAAVSSTV*AQDSGA Trigger: AGCCCCAGAGTCCTGGGCCCAGACAGTGCTGCTAAC...AGCAGCTGCAGCCTCTGCCATCTCCTTTGGCCGAAGCTTACCCATCTTTGAGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111641.2 |
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| CDS-3UTR TCA 90 bp | AAAAAGTGGTTGATACCCTGGGGGTTGGTGGATGGAAACAGTTCCGTCTGCCAGCTGGGTGGGAAGATCTaGGGCAGTGGAGGGCTGGCT | + |
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Preference number: 4 (lower is better) Translates to: KKWLIPWGLVDGNSSVCQLGGKI*GSGGLA Trigger: AGCCAGCCCTCCACTGCCTCAGATCTTCCCACCCAG...CTGGCAGACGGAACTGTTTCCATCCACCAACCCCCAGGGTATCAACCACTTTTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000023994.10 |
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| CDS-3UTR CCA 90 bp | AAAAAGTGGTTGATACCCTGGGGGTTGGTGGATGGAAACAGTTCCGTCTGCCAGCAGCAGGAGGGTCAGTaGGGTCAGCCTGGAGGCCAT | + |
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Preference number: 4 (lower is better) Translates to: KKWLIPWGLVDGNSSVCQQQEGQ*GQPGGH Trigger: ATGGCCTCCAGGCTGACCCCACTGACCCTCCTGCTG...CTGGCAGACGGAACTGTTTCCATCCACCAACCCCCAGGGTATCAACCACTTTTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000023994.10 |
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| CDS-3UTR CCA 90 bp | ATATACACGACCCATGAAGACTGGGAACCTGTGTTGCTGGTCCCAGAGCAGGAACAGCAGGAGGGTCAGTaGGGTCAGCCTGGAGGCCAT | + |
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Preference number: 4 (lower is better) Translates to: IYTTHEDWEPVLLVPEQEQQEGQ*GQPGGH Trigger: ATGGCCTCCAGGCTGACCCCACTGACCCTCCTGCTG...TTCCTGCTCTGGGACCAGCAACACAGGTTCCCAGTCTTCATGGGTCGTGTATAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111641.2 |
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| CDS-3UTR CCA 90 bp | ACCTCAAAGATGGGTAAGCTTCGGCCAAAGGAGATGGCAGAGGCTGCAGCTGCTGAGGCAGTGGAGGGCTaGCTGGAAGAATTCAGAGGG | + |
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Preference number: 4 (lower is better) Translates to: TSKMGKLRPKEMAEAAAAEAVEG*LEEFRG Trigger: CCCTCTGAATTCTTCCAGCCAGCCCTCCACTGCCTC...AGCAGCTGCAGCCTCTGCCATCTCCTTTGGCCGAAGCTTACCCATCTTTGAGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111641.2 |
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| CDS-3UTR CCA 90 bp | AAAAAGTGGTTGATACCCTGGGGGTTGGTGGATGGAAACAGTTCCGTCTGCCAGCTGGGCCCAGGACTCTaGGGCTGCTTCCATACAGGC | + |
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Preference number: 4 (lower is better) Translates to: KKWLIPWGLVDGNSSVCQLGPGL*GCFHTG Trigger: GCCTGTATGGAAGCAGCCCCAGAGTCCTGGGCCCAG...CTGGCAGACGGAACTGTTTCCATCCACCAACCCCCAGGGTATCAACCACTTTTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000023994.10 |
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| CDS-3UTR TCA 90 bp | AAAAAGTGGTTGATACCCTGGGGGTTGGTGGATGGAAACAGTTCCGTCTGCCAGGAATCTGTGGGTAGCTaGGCAGCTGGCTGGCTGTGC | + |
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Preference number: 4 (lower is better) Translates to: KKWLIPWGLVDGNSSVCQESVGS*AAGWLC Trigger: GCACAGCCAGCCAGCTGCTCAGCTACCCACAGATTC...CTGGCAGACGGAACTGTTTCCATCCACCAACCCCCAGGGTATCAACCACTTTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000023994.10 |
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| CDS-3UTR TCA 90 bp | GCAGGCAGTGGCAAGGAAATAACCGGAGGAGCTGAAGCTTGGGTGACAATGTTTGAATCTGTGGGTAGCTaGGCAGCTGGCTGGCTGTGC | + |
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Preference number: 4 (lower is better) Translates to: AGSGKEITGGAEAWVTMFESVGS*AAGWLC Trigger: GCACAGCCAGCCAGCTGCTCAGCTACCCACAGATTC...AAACATTGTCACCCAAGCTTCAGCTCCTCCGGTTATTTCCTTGCCACTGCCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023994.10 ENSMUST00000111641.2 |
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| CDS-3UTR CCA 90 bp | AAAAAGTGGTTGATACCCTGGGGGTTGGTGGATGGAAACAGTTCCGTCTGCCAGCGCTTGAGCCTCCAGTaGATCCTGGGTGCTGTGGCT | + |
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Preference number: 4 (lower is better) Translates to: KKWLIPWGLVDGNSSVCQRLSLQ*ILGAVA Trigger: AGCCACAGCACCCAGGATCCACTGGAGGCTCAAGCG...CTGGCAGACGGAACTGTTTCCATCCACCAACCCCCAGGGTATCAACCACTTTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000023994.10 |
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| CDS-3UTR CCA 90 bp | AGACACCTGAAGATCTGGGTCCTCGGTCAGCCCGCACAGGTTGAGATCGTAAGTGTCCTGGAGAATCTGTaGGTAGCTGAGCAGCTGGCT | + |
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Preference number: 4 (lower is better) Translates to: RHLKIWVLGQPAQVEIVSVLENL*VAEQLA Trigger: AGCCAGCTGCTCAGCTACCCACAGATTCTCCAGGAC...ACTTACGATCTCAACCTGTGCGGGCTGACCGAGGACCCAGATCTTCAGGTGTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111641.2 |
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| CDS-3UTR CCA 90 bp | TCTCGTGTTTCATGGCAGACACCTGAAGATCTGGGTCCTCGGTCAGCCCGCACACATAGGTGTCCCTTATaGCCAGATCTGGGCTGTGGA | + |
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Preference number: 4 (lower is better) Translates to: SRVSWQTPEDLGPRSARTHRCPL*PDLGCG Trigger: TCCACAGCCCAGATCTGGCCATAAGGGACACCTATG...TGTGCGGGCTGACCGAGGACCCAGATCTTCAGGTGTCTGCCATGAAACACGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111641.2 |
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| CDS-3UTR CCA 90 bp | GCAGGCAGTGGCAAGGAAATAACCGGAGGAGCTGAAGCTTGGGTGACAATGTTTGTTAGCAGCACTGTCTaGGCCCAGGACTCTGGGGCT | + |
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Preference number: 4 (lower is better) Translates to: AGSGKEITGGAEAWVTMFVSSTV*AQDSGA Trigger: AGCCCCAGAGTCCTGGGCCCAGACAGTGCTGCTAAC...AAACATTGTCACCCAAGCTTCAGCTCCTCCGGTTATTTCCTTGCCACTGCCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023994.10 ENSMUST00000111641.2 |
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| 3UTR CAA 72 bp | TCTTCCTCCTCAGATTCTACATCATGCCTTCTGGTCTaGTCAGTGGGAAACCCTGCCAGGAGGCCCAACCGC | + |
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Preference number: 4 (lower is better) Translates to: SSSSDSTSCLLV*SVGNPARRPNR Trigger: GCGGTTGGGCCTCCTGGCAGGGTTTCCCACTGACAAGACCAGAAGGCATGATGTAGAATCTGAGGAGGAAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111641.2 |
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| CDS-3UTR GCA 90 bp | ACGACCCATGAAGACTGGGAACCTGTGTTGCTGGTCCCAGAGCAGGAAGAGGAAGGATGCTCTCCAAGTTaGTCTTGGTGCTGTCTCCAG | + |
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Preference number: 4 (lower is better) Translates to: TTHEDWEPVLLVPEQEEEGCSPS*SWCCLQ Trigger: CTGGAGACAGCACCAAGAGCAACTTGGAGAGCATCC...TTCCTCTTCCTGCTCTGGGACCAGCAACACAGGTTCCCAGTCTTCATGGGTCGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111641.2 |
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| CDS-3UTR GCA 90 bp | AAAAAGTGGTTGATACCCTGGGGGTTGGTGGATGGAAACAGTTCCGTCTGCCAGCCAGGACTCTGGGGCTaGTTCCATACAGGCTCTGAG | + |
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Preference number: 4 (lower is better) Translates to: KKWLIPWGLVDGNSSVCQPGLWG*FHTGSE Trigger: CTCAGAGCCTGTATGGAAGCAGCCCCAGAGTCCTGG...CTGGCAGACGGAACTGTTTCCATCCACCAACCCCCAGGGTATCAACCACTTTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000023994.10 |
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| CDS-3UTR CCA 90 bp | GCAGGCAGTGGCAAGGAAATAACCGGAGGAGCTGAAGCTTGGGTGACAATGTTTCAGTGGAGGGCTGGCTaGAAGAATTCAGAGGGGGCT | + |
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Preference number: 4 (lower is better) Translates to: AGSGKEITGGAEAWVTMFQWRAG*KNSEGA Trigger: AGCCCCCTCTGAATTCTTCCAGCCAGCCCTCCACTG...AAACATTGTCACCCAAGCTTCAGCTCCTCCGGTTATTTCCTTGCCACTGCCTGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023994.10 ENSMUST00000111641.2 |
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| CDS-3UTR CCA 90 bp | AAGATCTGGGTCCTCGGTCAGCCCGCACAGGTTGAGATCGTAAGTGAAGTCAAACAGTGGAGGGCTGGCTaGAAGAATTCAGAGGGGGCT | + |
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Preference number: 4 (lower is better) Translates to: KIWVLGQPAQVEIVSEVKQWRAG*KNSEGA Trigger: AGCCCCCTCTGAATTCTTCCAGCCAGCCCTCCACTG...TTTGACTTCACTTACGATCTCAACCTGTGCGGGCTGACCGAGGACCCAGATCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111641.2 |
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| CDS-3UTR CCA 90 bp | GCAGGCAGTGGCAAGGAAATAACCGGAGGAGCTGAAGCTTGGGTGACAATGTTTGAGGCAGTGGAGGGCTaGCTGGAAGAATTCAGAGGG | + |
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Preference number: 4 (lower is better) Translates to: AGSGKEITGGAEAWVTMFEAVEG*LEEFRG Trigger: CCCTCTGAATTCTTCCAGCCAGCCCTCCACTGCCTC...AAACATTGTCACCCAAGCTTCAGCTCCTCCGGTTATTTCCTTGCCACTGCCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023994.10 ENSMUST00000111641.2 |
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| CDS-3UTR CCA 90 bp | ACGACCCATGAAGACTGGGAACCTGTGTTGCTGGTCCCAGAGCAGGAAGAGGAAGAAGATCTGAGGCAGTaGAGGGCTGGCTGGAAGAAT | + |
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Preference number: 4 (lower is better) Translates to: TTHEDWEPVLLVPEQEEEEDLRQ*RAGWKN Trigger: ATTCTTCCAGCCAGCCCTCCACTGCCTCAGATCTTC...TTCCTCTTCCTGCTCTGGGACCAGCAACACAGGTTCCCAGTCTTCATGGGTCGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111641.2 |
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| CDS-3UTR CCA 90 bp | ACCTCAAAGATGGGTAAGCTTCGGCCAAAGGAGATGGCAGAGGCTGCAGCTGCTGGTTCAGTAGTAGCCTaGGTGGGAAGATCTGAGGCA | + |
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Preference number: 4 (lower is better) Translates to: TSKMGKLRPKEMAEAAAAGSVVA*VGRSEA Trigger: TGCCTCAGATCTTCCCACCCAGGCTACTACTGAACC...AGCAGCTGCAGCCTCTGCCATCTCCTTTGGCCGAAGCTTACCCATCTTTGAGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111641.2 |
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| CDS-3UTR CCA 90 bp | GCAGGCAGTGGCAAGGAAATAACCGGAGGAGCTGAAGCTTGGGTGACAATGTTTAGACACCTGAAGATCTaGGTCCTCGGTCAGCCCGCA | + |
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Preference number: 4 (lower is better) Translates to: AGSGKEITGGAEAWVTMFRHLKI*VLGQPA Trigger: TGCGGGCTGACCGAGGACCCAGATCTTCAGGTGTCT...AAACATTGTCACCCAAGCTTCAGCTCCTCCGGTTATTTCCTTGCCACTGCCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023994.10 |
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| CDS-3UTR TCA 90 bp | GCAGGCAGTGGCAAGGAAATAACCGGAGGAGCTGAAGCTTGGGTGACAATGTTTACAAAGCTCAGGTTGTaGGAGAGCTGCAGCTGTCCC | + |
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Preference number: 4 (lower is better) Translates to: AGSGKEITGGAEAWVTMFTKLRL*ESCSCP Trigger: GGGACAGCTGCAGCTCTCTCACAACCTGAGCTTTGT...AAACATTGTCACCCAAGCTTCAGCTCCTCCGGTTATTTCCTTGCCACTGCCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023994.10 |
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| CDS-3UTR TCA 90 bp | GCAGGCAGTGGCAAGGAAATAACCGGAGGAGCTGAAGCTTGGGTGACAATGTTTTTCATGGCAGACACCTaGAGATCTGGGTCCTCGGTC | + |
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Preference number: 4 (lower is better) Translates to: AGSGKEITGGAEAWVTMFFMADT*RSGSSV Trigger: GACCGAGGACCCAGATCTTCAGGTGTCTGCCATGAA...AAACATTGTCACCCAAGCTTCAGCTCCTCCGGTTATTTCCTTGCCACTGCCTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023994.10 |
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| CDS-3UTR GCA 90 bp | AAAAAGTGGTTGATACCCTGGGGGTTGGTGGATGGAAACAGTTCCGTCTGCCAGACTGGGAACCTGTGTTaGTGGTCCCAGAGCAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: KKWLIPWGLVDGNSSVCQTGNLC*WSQSRK Trigger: CTTCCTGCTCTGGGACCAGCAACACAGGTTCCCAGT...CTGGCAGACGGAACTGTTTCCATCCACCAACCCCCAGGGTATCAACCACTTTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000023994.10 |
||
| CDS-3UTR CCA 90 bp | GCAGGCAGTGGCAAGGAAATAACCGGAGGAGCTGAAGCTTGGGTGACAATGTTTGGCTACACTGGTTGTTaGCCAGGTAGAGGGCAGTAC | + |
|
Preference number: 4 (lower is better) Translates to: AGSGKEITGGAEAWVTMFGYTGC*PGRGQY Trigger: GTACTGCCCTCTACCTGGCCAACAACCAGTGTAGCC...AAACATTGTCACCCAAGCTTCAGCTCCTCCGGTTATTTCCTTGCCACTGCCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023994.10 ENSMUST00000111641.2 |
||
| CDS-3UTR CCA 90 bp | GCAGGCAGTGGCAAGGAAATAACCGGAGGAGCTGAAGCTTGGGTGACAATGTTTGTCCTGGAGAATCTGTaGGTAGCTGAGCAGCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: AGSGKEITGGAEAWVTMFVLENL*VAEQLA Trigger: AGCCAGCTGCTCAGCTACCCACAGATTCTCCAGGAC...AAACATTGTCACCCAAGCTTCAGCTCCTCCGGTTATTTCCTTGCCACTGCCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023994.10 ENSMUST00000111641.2 |
||
| CDS-3UTR CCA 90 bp | TCATATACACGACCCATGAAGACTGGGAACCTGTGTTGCTGGTCCCAGAGCAGGTCTCCAAGTTGCTCTTaGTGCTGTCTCCAGCCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: SYTRPMKTGNLCCWSQSRSPSCS*CCLQPQ Trigger: TTGGGGCTGGAGACAGCACCAAGAGCAACTTGGAGA...CCTGCTCTGGGACCAGCAACACAGGTTCCCAGTCTTCATGGGTCGTGTATATGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111641.2 |
||
| CDS-3UTR CCA 90 bp | TCTCGTGTTTCATGGCAGACACCTGAAGATCTGGGTCCTCGGTCAGCCCGCACACCCTTTAGTGCTTGGTaGACACAGGCAAAATCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: SRVSWQTPEDLGPRSARTPFSAW*TQAKSL Trigger: CAAGGATTTTGCCTGTGTCCACCAAGCACTAAAGGG...TGTGCGGGCTGACCGAGGACCCAGATCTTCAGGTGTCTGCCATGAAACACGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111641.2 |
||
| CDS-3UTR CCA 90 bp | GCAGGCAGTGGCAAGGAAATAACCGGAGGAGCTGAAGCTTGGGTGACAATGTTTTTCGGCCAAAGGAGATaGCAGAGGCTGCAGCTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: AGSGKEITGGAEAWVTMFFGQRR*QRLQLL Trigger: AAGCAGCTGCAGCCTCTGCCATCTCCTTTGGCCGAA...AAACATTGTCACCCAAGCTTCAGCTCCTCCGGTTATTTCCTTGCCACTGCCTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023994.10 |
||
| CDS-3UTR TCA 90 bp | AAAAAGTGGTTGATACCCTGGGGGTTGGTGGATGGAAACAGTTCCGTCTGCCAGAGCCATCTTGGTAGCTaGGAAGGCGTGGTAGAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: KKWLIPWGLVDGNSSVCQSHLGS*EGVVEL Trigger: AAGCTCTACCACGCCTTCTCAGCTACCAAGATGGCT...CTGGCAGACGGAACTGTTTCCATCCACCAACCCCCAGGGTATCAACCACTTTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000023994.10 |
||
| CDS-3UTR TCA 90 bp | ATTCTACATCATGCCTTCTGGTCTTGTCAGTGGGAAACCCTGCCAGGAGGCCCATCAAGTAGACAGCATTaGGAAGGACGAGGCAGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: ILHHAFWSCQWETLPGGPSSRQH*EGRGRC Trigger: ACACCTGCCTCGTCCTTCTCAATGCTGTCTACTTGA...TGGGCCTCCTGGCAGGGTTTCCCACTGACAAGACCAGAAGGCATGATGTAGAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111641.2 |
||
| CDS-3UTR GCA 90 bp | GCAGGCAGTGGCAAGGAAATAACCGGAGGAGCTGAAGCTTGGGTGACAATGTTTCAGGGAAGCTCTCTCTaGTTTTCGCTTGAGCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: AGSGKEITGGAEAWVTMFQGSSL*FSLEPP Trigger: TGGAGGCTCAAGCGAAAAGCAGAGAGAGCTTCCCTG...AAACATTGTCACCCAAGCTTCAGCTCCTCCGGTTATTTCCTTGCCACTGCCTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023994.10 ENSMUST00000111641.2 |
||
| CDS-3UTR GCA 90 bp | AAAAAGTGGTTGATACCCTGGGGGTTGGTGGATGGAAACAGTTCCGTCTGCCAGGGATGCTCTCCAAGTTaGTCTTGGTGCTGTCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: KKWLIPWGLVDGNSSVCQGCSPS*SWCCLQ Trigger: CTGGAGACAGCACCAAGAGCAACTTGGAGAGCATCC...CTGGCAGACGGAACTGTTTCCATCCACCAACCCCCAGGGTATCAACCACTTTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000023994.10 |
||
| CDS-3UTR GCA 90 bp | AAAAAGTGGTTGATACCCTGGGGGTTGGTGGATGGAAACAGTTCCGTCTGCCAGGGCTGTCCAGCAGCTTaGGGATCTTATGGTTGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: KKWLIPWGLVDGNSSVCQGCPAA*GSYGWC Trigger: ACACCAACCATAAGATCCGCAAGCTGCTGGACAGCC...CTGGCAGACGGAACTGTTTCCATCCACCAACCCCCAGGGTATCAACCACTTTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000023994.10 |
||
| CDS-3UTR CCA 90 bp | GCAGGCAGTGGCAAGGAAATAACCGGAGGAGCTGAAGCTTGGGTGACAATGTTTGAAGATCTGAGGCAGTaGAGGGCTGGCTGGAAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: AGSGKEITGGAEAWVTMFEDLRQ*RAGWKN Trigger: ATTCTTCCAGCCAGCCCTCCACTGCCTCAGATCTTC...AAACATTGTCACCCAAGCTTCAGCTCCTCCGGTTATTTCCTTGCCACTGCCTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023994.10 ENSMUST00000111641.2 |
||
| CDS-3UTR CCA 90 bp | AAAAAGTGGTTGATACCCTGGGGGTTGGTGGATGGAAACAGTTCCGTCTGCCAGGGTTCAGTAGTAGCCTaGGTGGGAAGATCTGAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: KKWLIPWGLVDGNSSVCQGSVVA*VGRSEA Trigger: TGCCTCAGATCTTCCCACCCAGGCTACTACTGAACC...CTGGCAGACGGAACTGTTTCCATCCACCAACCCCCAGGGTATCAACCACTTTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000023994.10 |
||
| CDS-3UTR CCA 90 bp | GCAGGCAGTGGCAAGGAAATAACCGGAGGAGCTGAAGCTTGGGTGACAATGTTTTCTCCAAGTTGCTCTTaGTGCTGTCTCCAGCCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: AGSGKEITGGAEAWVTMFSPSCS*CCLQPQ Trigger: TTGGGGCTGGAGACAGCACCAAGAGCAACTTGGAGA...AAACATTGTCACCCAAGCTTCAGCTCCTCCGGTTATTTCCTTGCCACTGCCTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023994.10 ENSMUST00000111641.2 |
||
| CDS-3UTR CCA 90 bp | ACGACCCATGAAGACTGGGAACCTGTGTTGCTGGTCCCAGAGCAGGAAGAGGAACACAGGCAAAATCCTTaGGGTAGGAAAGGATGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: TTHEDWEPVLLVPEQEEEHRQNP*GRKGCS Trigger: AGAGCATCCTTTCCTACCCCAAGGATTTTGCCTGTG...TTCCTCTTCCTGCTCTGGGACCAGCAACACAGGTTCCCAGTCTTCATGGGTCGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111641.2 |
||
| CDS-3UTR CCA 90 bp | GCAGGCAGTGGCAAGGAAATAACCGGAGGAGCTGAAGCTTGGGTGACAATGTTTCATAGGTGTCCCTTATaGCCAGATCTGGGCTGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: AGSGKEITGGAEAWVTMFHRCPL*PDLGCG Trigger: TCCACAGCCCAGATCTGGCCATAAGGGACACCTATG...AAACATTGTCACCCAAGCTTCAGCTCCTCCGGTTATTTCCTTGCCACTGCCTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023994.10 ENSMUST00000111641.2 |
||
| CDS-3UTR CCA 90 bp | GCAGGCAGTGGCAAGGAAATAACCGGAGGAGCTGAAGCTTGGGTGACAATGTTTTGCGGATCTTATGGTTaGTGTTCTCAGCCACCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: AGSGKEITGGAEAWVTMFCGSYG*CSQPPR Trigger: CCTGGGTGGCTGAGAACACCAACCATAAGATCCGCA...AAACATTGTCACCCAAGCTTCAGCTCCTCCGGTTATTTCCTTGCCACTGCCTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023994.10 ENSMUST00000111641.2 |
||
| CDS-3UTR CCA 90 bp | CTCAGATTCTACATCATGCCTTCTGGTCTTGTCAGTGGGAAACCCTGCCAGGAGTGCGGATCTTATGGTTaGTGTTCTCAGCCACCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LRFYIMPSGLVSGKPCQECGSYG*CSQPPR Trigger: CCTGGGTGGCTGAGAACACCAACCATAAGATCCGCA...CTCCTGGCAGGGTTTCCCACTGACAAGACCAGAAGGCATGATGTAGAATCTGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111641.2 |
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| CDS-3UTR CCA 90 bp | AAAAAGTGGTTGATACCCTGGGGGTTGGTGGATGGAAACAGTTCCGTCTGCCAGACGACCCATGAAGACTaGGAACCTGTGTTGCTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: KKWLIPWGLVDGNSSVCQTTHED*EPVLLV Trigger: GACCAGCAACACAGGTTCCCAGTCTTCATGGGTCGT...CTGGCAGACGGAACTGTTTCCATCCACCAACCCCCAGGGTATCAACCACTTTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000023994.10 |
||
| CDS-3UTR TCA 90 bp | GCAGGCAGTGGCAAGGAAATAACCGGAGGAGCTGAAGCTTGGGTGACAATGTTTTCAAGTAGACAGCATTaGGAAGGACGAGGCAGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: AGSGKEITGGAEAWVTMFSSRQH*EGRGRC Trigger: ACACCTGCCTCGTCCTTCTCAATGCTGTCTACTTGA...AAACATTGTCACCCAAGCTTCAGCTCCTCCGGTTATTTCCTTGCCACTGCCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023994.10 ENSMUST00000111641.2 |
||
| CDS-3UTR TCA 90 bp | GCAGGCAGTGGCAAGGAAATAACCGGAGGAGCTGAAGCTTGGGTGACAATGTTTCAGTTTCTCCATGACTaGCAGCATGTCTTGGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: AGSGKEITGGAEAWVTMFQFLHD*QHVLAA Trigger: AGCAGCCAAGACATGCTGTCAGTCATGGAGAAACTG...AAACATTGTCACCCAAGCTTCAGCTCCTCCGGTTATTTCCTTGCCACTGCCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023994.10 |
||
| CDS-3UTR GCA 90 bp | AAAAAGTGGTTGATACCCTGGGGGTTGGTGGATGGAAACAGTTCCGTCTGCCAGTGGGGTAGGAAAGGATaGTCTCCAAGTTGCTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: KKWLIPWGLVDGNSSVCQWGRKG*SPSCSW Trigger: CCAAGAGCAACTTGGAGAGCATCCTTTCCTACCCCA...CTGGCAGACGGAACTGTTTCCATCCACCAACCCCCAGGGTATCAACCACTTTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000023994.10 |
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| CDS-3UTR GCA 90 bp | ACGACCCATGAAGACTGGGAACCTGTGTTGCTGGTCCCAGAGCAGGAAGAGGAAATACAGGCTCTGAGATaGATTCACATAGGTGTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: TTHEDWEPVLLVPEQEEEIQALR*IHIGVP Trigger: AGGGACACCTATGTGAATGCATCTCAGAGCCTGTAT...TTCCTCTTCCTGCTCTGGGACCAGCAACACAGGTTCCCAGTCTTCATGGGTCGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111641.2 |
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| CDS-3UTR CCA 90 bp | GCAGGCAGTGGCAAGGAAATAACCGGAGGAGCTGAAGCTTGGGTGACAATGTTTAGCTTGCGGATCTTATaGTTGGTGTTCTCAGCCACC | + |
|
Preference number: 4 (lower is better) Translates to: AGSGKEITGGAEAWVTMFSLRIL*LVFSAT Trigger: GGTGGCTGAGAACACCAACCATAAGATCCGCAAGCT...AAACATTGTCACCCAAGCTTCAGCTCCTCCGGTTATTTCCTTGCCACTGCCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023994.10 ENSMUST00000111641.2 |
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| CDS-3UTR CCA 90 bp | TCCTCAGATTCTACATCATGCCTTCTGGTCTTGTCAGTGGGAAACCCTGCCAGGAGCTTGCGGATCTTATaGTTGGTGTTCTCAGCCACC | + |
|
Preference number: 4 (lower is better) Translates to: SSDSTSCLLVLSVGNPARSLRIL*LVFSAT Trigger: GGTGGCTGAGAACACCAACCATAAGATCCGCAAGCT...CCTGGCAGGGTTTCCCACTGACAAGACCAGAAGGCATGATGTAGAATCTGAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111641.2 |
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| CDS-3UTR CCA 90 bp | GCAGGCAGTGGCAAGGAAATAACCGGAGGAGCTGAAGCTTGGGTGACAATGTTTGCAGCTGTCCCACCTTaGCCTTCAAAGTATGGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: AGSGKEITGGAEAWVTMFAAVPP*PSKYGH Trigger: ATGACCATACTTTGAAGGCCAAGGTGGGACAGCTGC...AAACATTGTCACCCAAGCTTCAGCTCCTCCGGTTATTTCCTTGCCACTGCCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023994.10 |
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| CDS-3UTR CCA 90 bp | GCAGGCAGTGGCAAGGAAATAACCGGAGGAGCTGAAGCTTGGGTGACAATGTTTGCATCGTCAGGTAAGTaGGCAGGAATTTGGACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: AGSGKEITGGAEAWVTMFASSGK*AGIWTA Trigger: AGCTGTCCAAATTCCTGCCCACTTACCTGACGATGC...AAACATTGTCACCCAAGCTTCAGCTCCTCCGGTTATTTCCTTGCCACTGCCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023994.10 |
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| CDS-3UTR TCA 90 bp | AAAAAGTGGTTGATACCCTGGGGGTTGGTGGATGGAAACAGTTCCGTCTGCCAGATTCCAGTTTCTCCATaGCTGACAGCATGTCTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: KKWLIPWGLVDGNSSVCQIPVSP*LTACLG Trigger: GCCAAGACATGCTGTCAGTCATGGAGAAACTGGAAT...CTGGCAGACGGAACTGTTTCCATCCACCAACCCCCAGGGTATCAACCACTTTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000023994.10 |
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| CDS-3UTR CCA 90 bp | GCAGGCAGTGGCAAGGAAATAACCGGAGGAGCTGAAGCTTGGGTGACAATGTTTCACAGGCAAAATCCTTaGGGTAGGAAAGGATGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: AGSGKEITGGAEAWVTMFHRQNP*GRKGCS Trigger: AGAGCATCCTTTCCTACCCCAAGGATTTTGCCTGTG...AAACATTGTCACCCAAGCTTCAGCTCCTCCGGTTATTTCCTTGCCACTGCCTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023994.10 ENSMUST00000111641.2 |
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| CDS-3UTR CCA 90 bp | AAAAAGTGGTTGATACCCTGGGGGTTGGTGGATGGAAACAGTTCCGTCTGCCAGCCCTTTAGTGCTTGGTaGACACAGGCAAAATCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: KKWLIPWGLVDGNSSVCQPFSAW*TQAKSL Trigger: CAAGGATTTTGCCTGTGTCCACCAAGCACTAAAGGG...CTGGCAGACGGAACTGTTTCCATCCACCAACCCCCAGGGTATCAACCACTTTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000023994.10 |
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| CDS-3UTR CCA 90 bp | GCAGGCAGTGGCAAGGAAATAACCGGAGGAGCTGAAGCTTGGGTGACAATGTTTGTATGGTCATCGAATTaGGCCACAGGGTACTTTACG | + |
|
Preference number: 4 (lower is better) Translates to: AGSGKEITGGAEAWVTMFVWSSN*ATGYFT Trigger: CGTAAAGTACCCTGTGGCCCAATTCGATGACCATAC...AAACATTGTCACCCAAGCTTCAGCTCCTCCGGTTATTTCCTTGCCACTGCCTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023994.10 ENSMUST00000111641.2 |
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| CDS-3UTR CCA 90 bp | AAAAAGTGGTTGATACCCTGGGGGTTGGTGGATGGAAACAGTTCCGTCTGCCAGAAGTGGGCAGGAATTTaGACAGCTCCAGCTTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: KKWLIPWGLVDGNSSVCQKWAGI*TAPASS Trigger: TGAAGAAGCTGGAGCTGTCCAAATTCCTGCCCACTT...CTGGCAGACGGAACTGTTTCCATCCACCAACCCCCAGGGTATCAACCACTTTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000023994.10 |
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| CDS-3UTR TCA 90 bp | AAAAAGTGGTTGATACCCTGGGGGTTGGTGGATGGAAACAGTTCCGTCTGCCAGTCTGAGACACAGAAGTaGCACCTTTGGATGAAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: KKWLIPWGLVDGNSSVCQSETQK*HLWMKS Trigger: GCTTTTCATCCAAAGGTGTCACTTCTGTGTCTCAGA...CTGGCAGACGGAACTGTTTCCATCCACCAACCCCCAGGGTATCAACCACTTTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000023994.10 |
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| CDS-3UTR TCA 90 bp | AAGATCTGGGTCCTCGGTCAGCCCGCACAGGTTGAGATCGTAAGTGAAGTCAAATCTGAGACACAGAAGTaGCACCTTTGGATGAAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: KIWVLGQPAQVEIVSEVKSETQK*HLWMKS Trigger: GCTTTTCATCCAAAGGTGTCACTTCTGTGTCTCAGA...TTTGACTTCACTTACGATCTCAACCTGTGCGGGCTGACCGAGGACCCAGATCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111641.2 |
||
| CDS-3UTR GCA 90 bp | GCAGGCAGTGGCAAGGAAATAACCGGAGGAGCTGAAGCTTGGGTGACAATGTTTATACAGGCTCTGAGATaGATTCACATAGGTGTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: AGSGKEITGGAEAWVTMFIQALR*IHIGVP Trigger: AGGGACACCTATGTGAATGCATCTCAGAGCCTGTAT...AAACATTGTCACCCAAGCTTCAGCTCCTCCGGTTATTTCCTTGCCACTGCCTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023994.10 ENSMUST00000111641.2 |
||
| CDS-3UTR GCA 90 bp | GCAGGCAGTGGCAAGGAAATAACCGGAGGAGCTGAAGCTTGGGTGACAATGTTTACATCTTTAAGTTGGTaGTTTGGGAACACGGGTACC | + |
|
Preference number: 4 (lower is better) Translates to: AGSGKEITGGAEAWVTMFTSLSW*FGNTGT Trigger: GGTACCCGTGTTCCCAAAGCACCAACTTAAAGATGT...AAACATTGTCACCCAAGCTTCAGCTCCTCCGGTTATTTCCTTGCCACTGCCTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023994.10 |
||
| CDS-3UTR CCA 90 bp | GCAGGCAGTGGCAAGGAAATAACCGGAGGAGCTGAAGCTTGGGTGACAATGTTTTTTAAGTTGGTGCTTTaGGAACACGGGTACCACGAT | + |
|
Preference number: 4 (lower is better) Translates to: AGSGKEITGGAEAWVTMFFKLVL*EHGYHD Trigger: ATCGTGGTACCCGTGTTCCCAAAGCACCAACTTAAA...AAACATTGTCACCCAAGCTTCAGCTCCTCCGGTTATTTCCTTGCCACTGCCTGC 49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000023994.10 |
||
| CDS-3UTR GCA 90 bp | TCTCAAATTCCCATAGTCTCTTCCTCCTCAGATTCTACATCATGCCTTCTGGTCGGCTGTCCAGCAGCTTaGGGATCTTATGGTTGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: SQIPIVSSSSDSTSCLLVGCPAA*GSYGWC Trigger: ACACCAACCATAAGATCCGCAAGCTGCTGGACAGCC...GACCAGAAGGCATGATGTAGAATCTGAGGAGGAAGAGACTATGGGAATTTGAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111641.2 |
||
| CDS-3UTR CCA 90 bp | TCTTCCTCCTCAGATTCTACATCATGCCTTCTGGTCTTGTCAGTGGGAAACCCTGTATGGTCATCGAATTaGGCCACAGGGTACTTTACG | + |
|
Preference number: 4 (lower is better) Translates to: SSSSDSTSCLLVLSVGNPVWSSN*ATGYFT Trigger: CGTAAAGTACCCTGTGGCCCAATTCGATGACCATAC...AGGGTTTCCCACTGACAAGACCAGAAGGCATGATGTAGAATCTGAGGAGGAAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111641.2 |
||
| CDS-3UTR CCA 90 bp | GCAGGCAGTGGCAAGGAAATAACCGGAGGAGCTGAAGCTTGGGTGACAATGTTTTCTACATCTTTAAGTTaGTGCTTTGGGAACACGGGT | + |
|
Preference number: 4 (lower is better) Translates to: AGSGKEITGGAEAWVTMFSTSLS*CFGNTG Trigger: ACCCGTGTTCCCAAAGCACCAACTTAAAGATGTAGA...AAACATTGTCACCCAAGCTTCAGCTCCTCCGGTTATTTCCTTGCCACTGCCTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023994.10 |
||
| CDS-3UTR CCA 90 bp | GCAGGCAGTGGCAAGGAAATAACCGGAGGAGCTGAAGCTTGGGTGACAATGTTTATGTTATCTTCCACTTaGCACTCAAGTAGACAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: AGSGKEITGGAEAWVTMFMLSST*HSSRQH Trigger: ATGCTGTCTACTTGAGTGCCAAGTGGAAGATAACAT...AAACATTGTCACCCAAGCTTCAGCTCCTCCGGTTATTTCCTTGCCACTGCCTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023994.10 ENSMUST00000111641.2 |
||
| CDS-3UTR GCA 90 bp | TTAGTCTCAAATTCCCATAGTCTCTTCCTCCTCAGATTCTACATCATGCCTTCTCAGGGAAGCTCTCTCTaGTTTTCGCTTGAGCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LVSNSHSLFLLRFYIMPSQGSSL*FSLEPP Trigger: TGGAGGCTCAAGCGAAAAGCAGAGAGAGCTTCCCTG...AGAAGGCATGATGTAGAATCTGAGGAGGAAGAGACTATGGGAATTTGAGACTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111641.2 |
||
| CDS-3UTR GCA 90 bp | AAAAAGTGGTTGATACCCTGGGGGTTGGTGGATGGAAACAGTTCCGTCTGCCAGACAGCATGTCTTGGCTaGTCTTTACTTTTATATGAG | + |
|
Preference number: 4 (lower is better) Translates to: KKWLIPWGLVDGNSSVCQTACLG*SLLLYE Trigger: CTCATATAAAAGTAAAGAGCAGCCAAGACATGCTGT...CTGGCAGACGGAACTGTTTCCATCCACCAACCCCCAGGGTATCAACCACTTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000023994.10 |
||
| CDS-3UTR CCA 90 bp | GCAGGCAGTGGCAAGGAAATAACCGGAGGAGCTGAAGCTTGGGTGACAATGTTTACTGACAGCATGTCTTaGCTGCTCTTTACTTTTATA | + |
|
Preference number: 4 (lower is better) Translates to: AGSGKEITGGAEAWVTMFTDSMS*LLFTFI Trigger: TATAAAAGTAAAGAGCAGCCAAGACATGCTGTCAGT...AAACATTGTCACCCAAGCTTCAGCTCCTCCGGTTATTTCCTTGCCACTGCCTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023994.10 |
||
| CDS-3UTR CCA 90 bp | AAATCAGACATCAGCAGGAAAGTCCTGGTGGGTGGAGATTCTGCTCTTAATTTCATGTTATCTTCCACTTaGCACTCAAGTAGACAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: KSDISRKVLVGGDSALNFMLSST*HSSRQH Trigger: ATGCTGTCTACTTGAGTGCCAAGTGGAAGATAACAT...GAAATTAAGAGCAGAATCTCCACCCACCAGGACTTTCCTGCTGATGTCTGATTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111641.2 |
||
| CDS GCA 90 bp | GCTCTGGGGGACTCCAGGAGTCATCTCTTTCAGGGAAGCTCTCTCTaGTTTTCGCTTGAGCCTCCAGTGGATCCTGGGTGCTGTGGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: ALGDSRSHLFQGSSL*FSLEPPVDPGCCGW Trigger: CCAGCCACAGCACCCAGGATCCACTGGAGGCTCAAGCGAAAAGCAGAGAGAGCTTCCCTGAAAGAGATGACTCCTGGAGTCCCCCAGAGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023994.10 ENSMUST00000111641.2 |
||
| CDS TCA 90 bp | CTCCAGGAGTCATCTCTTTCAGGGAAGCTCTCTCTGCTTTTCGCTTaGGCCTCCAGTGGATCCTGGGTGCTGTGGCTGGTAGCTTCGGGA | + |
|
Preference number: 5 (lower is better) Translates to: LQESSLSGKLSLLFA*ASSGSWVLWLVASG Trigger: TCCCGAAGCTACCAGCCACAGCACCCAGGATCCACTGGAGGCTCAAGCGAAAAGCAGAGAGAGCTTCCCTGAAAGAGATGACTCCTGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023994.10 ENSMUST00000111641.2 |
||
| CDS TCA 90 bp | TCTGAGAGCTTTGCCTCTGAGGAGTCTCTGTCTGAATCAGAGCACTaGGCAAGCGGCTCCGGGCAGAAGGGTTCAGTAGTAGCCTGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: SESFASEESLSESEH*ASGSGQKGSVVAWV Trigger: CACCCAGGCTACTACTGAACCCTTCTGCCCGGAGCCGCTTGCTCAGTGCTCTGATTCAGACAGAGACTCCTCAGAGGCAAAGCTCTCAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023994.10 ENSMUST00000111641.2 |
||
| CDS GCA 90 bp | GTCTGGGCCCAGGACTCTGGGGCTGCTTCCATACAGGCTCTGAGATaGATTCACATAGGTGTCCCTTATGGCCAGATCTGGGCTGTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: VWAQDSGAASIQALR*IHIGVPYGQIWAVE Trigger: TTCCACAGCCCAGATCTGGCCATAAGGGACACCTATGTGAATGCATCTCAGAGCCTGTATGGAAGCAGCCCCAGAGTCCTGGGCCCAGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023994.10 ENSMUST00000111641.2 |
||
| CDS CCA 90 bp | GGCTACACTGGTTGTTGGCCAGGTAGAGGGCAGTACTGTAGGCTCTaGGGGACTCCAGGAGTCATCTCTTTCAGGGAAGCTCTCTCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: GYTGCWPGRGQYCRL*GTPGVISFREALSA Trigger: AGCAGAGAGAGCTTCCCTGAAAGAGATGACTCCTGGAGTCCCCCAGAGCCTACAGTACTGCCCTCTACCTGGCCAACAACCAGTGTAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023994.10 ENSMUST00000111641.2 |
||
| CDS-3UTR CAA 90 bp | TCCCAGAGCAGGAAGAGGAAAGGTCGCTGCACCTCAAAGATGGGTAAGCTTCGGAAGCCTCTGAGAGCTTaGCCTCTGAGGAGTCTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: SQSRKRKGRCTSKMGKLRKPLRA*PLRSLC Trigger: ACAGAGACTCCTCAGAGGCAAAGCTCTCAGAGGCTT...CCGAAGCTTACCCATCTTTGAGGTGCAGCGACCTTTCCTCTTCCTGCTCTGGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111641.2 |
||
| CDS TCA 90 bp | TGGTGCTTTGGGAACACGGGTACCACGATCACAAAGCTCAGGTTGTaGGAGAGCTGCAGCTGTCCCACCTTGGCCTTCAAAGTATGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: WCFGNTGTTITKLRL*ESCSCPTLAFKVWS Trigger: TGACCATACTTTGAAGGCCAAGGTGGGACAGCTGCAGCTCTCTCACAACCTGAGCTTTGTGATCGTGGTACCCGTGTTCCCAAAGCACCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023994.10 |
||
| CDS-3UTR CAA 90 bp | GCAGGCAGTGGCAAGGAAATAACCGGAGGAGCTGAAGCTTGGGTGACAATGTTTCTCTCTGCTTTTCGCTaGAGCCTCCAGTGGATCCTG | + |
|
Preference number: 5 (lower is better) Translates to: AGSGKEITGGAEAWVTMFLSAFR*SLQWIL Trigger: CAGGATCCACTGGAGGCTCAAGCGAAAAGCAGAGAG...AAACATTGTCACCCAAGCTTCAGCTCCTCCGGTTATTTCCTTGCCACTGCCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023994.10 ENSMUST00000111641.2 |
||
| CDS CCA 90 bp | AGGCAGGTGTCAGAAGGCAGGCTGTCCAGCAGCTTGCGGATCTTATaGTTGGTGTTCTCAGCCACCCAGGTGTTGATGAGTTCTAAGTTA | + |
|
Preference number: 5 (lower is better) Translates to: RQVSEGRLSSSLRIL*LVFSATQVLMSSKL Trigger: TAACTTAGAACTCATCAACACCTGGGTGGCTGAGAACACCAACCATAAGATCCGCAAGCTGCTGGACAGCCTGCCTTCTGACACCTGCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023994.10 ENSMUST00000111641.2 |
||
| CDS-3UTR CAA 90 bp | GCAGGCAGTGGCAAGGAAATAACCGGAGGAGCTGAAGCTTGGGTGACAATGTTTAAGCCTCTGAGAGCTTaGCCTCTGAGGAGTCTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: AGSGKEITGGAEAWVTMFKPLRA*PLRSLC Trigger: ACAGAGACTCCTCAGAGGCAAAGCTCTCAGAGGCTT...AAACATTGTCACCCAAGCTTCAGCTCCTCCGGTTATTTCCTTGCCACTGCCTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023994.10 ENSMUST00000111641.2 |
||
| CDS-3UTR CAA 90 bp | GCAGGCAGTGGCAAGGAAATAACCGGAGGAGCTGAAGCTTGGGTGACAATGTTTTGCAGCTGTCCCACCTaGGCCTTCAAAGTATGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: AGSGKEITGGAEAWVTMFCSCPT*AFKVWS Trigger: TGACCATACTTTGAAGGCCAAGGTGGGACAGCTGCA...AAACATTGTCACCCAAGCTTCAGCTCCTCCGGTTATTTCCTTGCCACTGCCTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023994.10 |
||
| CDS-3UTR CAA 90 bp | AAAAAGTGGTTGATACCCTGGGGGTTGGTGGATGGAAACAGTTCCGTCTGCCAGGGGGAAAAGGCCATGTaGGTCTTAGCCATCTTGGTA | + |
|
Preference number: 5 (lower is better) Translates to: KKWLIPWGLVDGNSSVCQGEKAM*VLAILV Trigger: TACCAAGATGGCTAAGACCAACATGGCCTTTTCCCC...CTGGCAGACGGAACTGTTTCCATCCACCAACCCCCAGGGTATCAACCACTTTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENSMUST00000023994.10 |
||
| CDS TCA 90 bp | GCTGAATGGGGAAAAGGCCATGTTGGTCTTAGCCATCTTGGTAGCTaGGAAGGCGTGGTAGAGCTTCACAGAGAAATCTGTCAAAGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: AEWGKGHVGLSHLGS*EGVVELHREICQSL Trigger: GAGGCTTTGACAGATTTCTCTGTGAAGCTCTACCACGCCTTCTCAGCTACCAAGATGGCTAAGACCAACATGGCCTTTTCCCCATTCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023994.10 ENSMUST00000111641.2 |
||
| CDS TCA 90 bp | TTGGTTCAAATGTTATCTTCCACTTGGCACTCAAGTAGACAGCATTaGGAAGGACGAGGCAGGTGTCAGAAGGCAGGCTGTCCAGCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: LVQMLSSTWHSSRQH*EGRGRCQKAGCPAA Trigger: AGCTGCTGGACAGCCTGCCTTCTGACACCTGCCTCGTCCTTCTCAATGCTGTCTACTTGAGTGCCAAGTGGAAGATAACATTTGAACCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023994.10 ENSMUST00000111641.2 |
||
| CDS CCA 90 bp | AGCTGCAGCTGTCCCACCTTGGCCTTCAAAGTATGGTCATCGAATTaGGCCACAGGGTACTTTACGCTACTCATCATGGGCACTTTAATC | + |
|
Preference number: 5 (lower is better) Translates to: SCSCPTLAFKVWSSN*ATGYFTLLIMGTLI Trigger: GATTAAAGTGCCCATGATGAGTAGCGTAAAGTACCCTGTGGCCCAATTCGATGACCATACTTTGAAGGCCAAGGTGGGACAGCTGCAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023994.10 |
||
| CDS-3UTR CAA 90 bp | CCTGTCTCAACCCCTGGGGTCATATACACGACCCATGAAGACTGGGAACCTGTGACAGAAGTGACACCTTaGGATGAAAAGCCCTTTAGT | + |
|
Preference number: 5 (lower is better) Translates to: PVSTPGVIYTTHEDWEPVTEVTP*DEKPFS Trigger: ACTAAAGGGCTTTTCATCCAAAGGTGTCACTTCTGT...CACAGGTTCCCAGTCTTCATGGGTCGTGTATATGACCCCAGGGGTTGAGACAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000111641.2 |
||
| CDS-3UTR CAA 90 bp | GCAGGCAGTGGCAAGGAAATAACCGGAGGAGCTGAAGCTTGGGTGACAATGTTTTCAGCCACCCAGGTGTaGATGAGTTCTAAGTTAGCA | + |
|
Preference number: 5 (lower is better) Translates to: AGSGKEITGGAEAWVTMFSATQV*MSSKLA Trigger: TGCTAACTTAGAACTCATCAACACCTGGGTGGCTGA...AAACATTGTCACCCAAGCTTCAGCTCCTCCGGTTATTTCCTTGCCACTGCCTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023994.10 ENSMUST00000111641.2 |
||
| CDS-3UTR CAA 90 bp | TGTTTACCCAAGCCTGTCTCAACCCCTGGGGTCATATACACGACCCATGAAGACTCAGCCACCCAGGTGTaGATGAGTTCTAAGTTAGCA | + |
|
Preference number: 5 (lower is better) Translates to: CLPKPVSTPGVIYTTHEDSATQV*MSSKLA Trigger: TGCTAACTTAGAACTCATCAACACCTGGGTGGCTGA...GTCTTCATGGGTCGTGTATATGACCCCAGGGGTTGAGACAGGCTTGGGTAAACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111641.2 |
||
| CDS-3UTR CAA 90 bp | GCAGGCAGTGGCAAGGAAATAACCGGAGGAGCTGAAGCTTGGGTGACAATGTTTAGTATGGTCATCGAATaGGGCCACAGGGTACTTTAC | + |
|
Preference number: 5 (lower is better) Translates to: AGSGKEITGGAEAWVTMFSMVIE*GHRVLY Trigger: GTAAAGTACCCTGTGGCCCAATTCGATGACCATACT...AAACATTGTCACCCAAGCTTCAGCTCCTCCGGTTATTTCCTTGCCACTGCCTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023994.10 ENSMUST00000111641.2 |
||
| CDS-3UTR CAA 90 bp | CTCAGATTCTACATCATGCCTTCTGGTCTTGTCAGTGGGAAACCCTGCCAGGAGAGTATGGTCATCGAATaGGGCCACAGGGTACTTTAC | + |
|
Preference number: 5 (lower is better) Translates to: LRFYIMPSGLVSGKPCQESMVIE*GHRVLY Trigger: GTAAAGTACCCTGTGGCCCAATTCGATGACCATACT...CTCCTGGCAGGGTTTCCCACTGACAAGACCAGAAGGCATGATGTAGAATCTGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111641.2 |
||
| CDS-3UTR CAA 90 bp | AAAAAGTGGTTGATACCCTGGGGGTTGGTGGATGGAAACAGTTCCGTCTGCCAGTTCTTCATGATGGCCTaGAAGACAGTGGGGTTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: KKWLIPWGLVDGNSSVCQFFMMA*KTVGLR Trigger: TCTCAACCCCACTGTCTTCAAGGCCATCATGAAGAA...CTGGCAGACGGAACTGTTTCCATCCACCAACCCCCAGGGTATCAACCACTTTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000023994.10 |
||
| CDS CCA 90 bp | GACAGTGGGGTTGAGAGCCTTTTCTACATCTTTAAGTTGGTGCTTTaGGAACACGGGTACCACGATCACAAAGCTCAGGTTGTGAGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: DSGVESLFYIFKLVL*EHGYHDHKAQVVRE Trigger: CTCTCTCACAACCTGAGCTTTGTGATCGTGGTACCCGTGTTCCCAAAGCACCAACTTAAAGATGTAGAAAAGGCTCTCAACCCCACTGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023994.10 |
||
| CDS-3UTR CAA 90 bp | AGACACCTGAAGATCTGGGTCCTCGGTCAGCCCGCACAGGTTGAGATCGTAAGTGCGCCATCATCTTTTTaGGTTCAAATGTTATCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: RHLKIWVLGQPAQVEIVSAPSSF*VQMLSS Trigger: GGAAGATAACATTTGAACCAAAAAAGATGATGGCGC...ACTTACGATCTCAACCTGTGCGGGCTGACCGAGGACCCAGATCTTCAGGTGTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111641.2 |
||
| CDS-3UTR CAA 90 bp | GCAGGCAGTGGCAAGGAAATAACCGGAGGAGCTGAAGCTTGGGTGACAATGTTTTTCTACATCTTTAAGTaGGTGCTTTGGGAACACGGG | + |
|
Preference number: 5 (lower is better) Translates to: AGSGKEITGGAEAWVTMFFYIFK*VLWEHG Trigger: CCCGTGTTCCCAAAGCACCAACTTAAAGATGTAGAA...AAACATTGTCACCCAAGCTTCAGCTCCTCCGGTTATTTCCTTGCCACTGCCTGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023994.10 |
||
| CDS-3UTR CAA 90 bp | GCAGGCAGTGGCAAGGAAATAACCGGAGGAGCTGAAGCTTGGGTGACAATGTTTTTGAAGACAGTGGGGTaGAGAGCCTTTTCTACATCT | + |
|
Preference number: 5 (lower is better) Translates to: AGSGKEITGGAEAWVTMFLKTVG*RAFSTS Trigger: AGATGTAGAAAAGGCTCTCAACCCCACTGTCTTCAA...AAACATTGTCACCCAAGCTTCAGCTCCTCCGGTTATTTCCTTGCCACTGCCTGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000023994.10 |
||
| CDS-3UTR CAA 90 bp | GCAGGCAGTGGCAAGGAAATAACCGGAGGAGCTGAAGCTTGGGTGACAATGTTTACAGAAGTGACACCTTaGGATGAAAAGCCCTTTAGT | + |
|
Preference number: 5 (lower is better) Translates to: AGSGKEITGGAEAWVTMFTEVTP*DEKPFS Trigger: ACTAAAGGGCTTTTCATCCAAAGGTGTCACTTCTGT...AAACATTGTCACCCAAGCTTCAGCTCCTCCGGTTATTTCCTTGCCACTGCCTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023994.10 ENSMUST00000111641.2 |
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| CDS-3UTR CAA 90 bp | TTTCCTGAGTTAGTCTCAAATTCCCATAGTCTCTTCCTCCTCAGATTCTACATCCTCTCTGCTTTTCGCTaGAGCCTCCAGTGGATCCTG | + |
|
Preference number: 5 (lower is better) Translates to: FPELVSNSHSLFLLRFYILSAFR*SLQWIL Trigger: CAGGATCCACTGGAGGCTCAAGCGAAAAGCAGAGAG...GATGTAGAATCTGAGGAGGAAGAGACTATGGGAATTTGAGACTAACTCAGGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111641.2 |
||
| CDS-3UTR CAA 90 bp | AAAAAGTGGTTGATACCCTGGGGGTTGGTGGATGGAAACAGTTCCGTCTGCCAGGCGCCATCATCTTTTTaGGTTCAAATGTTATCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: KKWLIPWGLVDGNSSVCQAPSSF*VQMLSS Trigger: GGAAGATAACATTTGAACCAAAAAAGATGATGGCGC...CTGGCAGACGGAACTGTTTCCATCCACCAACCCCCAGGGTATCAACCACTTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000023994.10 |
||
| CDS TCA 90 bp | GTTGAGATCGTAAGTGAAGTCAAAGAATTCCAGTTTCTCCATGACTaGCAGCATGTCTTGGCTGCTCTTTACTTTTATATGAGGCATCGT | + |
|
Preference number: 5 (lower is better) Translates to: VEIVSEVKEFQFLHD*QHVLAALYFYMRHR Trigger: ACGATGCCTCATATAAAAGTAAAGAGCAGCCAAGACATGCTGTCAGTCATGGAGAAACTGGAATTCTTTGACTTCACTTACGATCTCAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023994.10 |
||
| CDS CCA 72 bp | GCAAGCGGCTCCGGGCAGAAGGGTTCAGTAGTAGCCTaGGTGGGAAGATCTGAGGCAGTGGAGGGCTGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: ASGSGQKGSVVA*VGRSEAVEGWL Trigger: CAGCCAGCCCTCCACTGCCTCAGATCTTCCCACCCAGGCTACTACTGAACCCTTCTGCCCGGAGCCGCTTGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023994.10 ENSMUST00000111641.2 |
||
| CDS TCA 72 bp | TGGATCCTGGGTGCTGTGGCTGGTAGCTTCGGGATCTaGGAAGGCTCTATCCCCAGCCAGCAGCAGCAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: WILGAVAGSFGI*EGSIPSQQQQQ Trigger: CTGCTGCTGCTGCTGGCTGGGGATAGAGCCTTCTCAGATCCCGAAGCTACCAGCCACAGCACCCAGGATCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023994.10 ENSMUST00000111641.2 |
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| CDS CCA 72 bp | AGGGAAGCTCTCTCTGCTTTTCGCTTGAGCCTCCAGTaGATCCTGGGTGCTGTGGCTGGTAGCTTCGGGATC | + |
|
Preference number: 6 (lower is better) Translates to: REALSAFRLSLQ*ILGAVAGSFGI Trigger: GATCCCGAAGCTACCAGCCACAGCACCCAGGATCCACTGGAGGCTCAAGCGAAAAGCAGAGAGAGCTTCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023994.10 ENSMUST00000111641.2 |
||
| CDS CAA 72 bp | ACGAGGCAGGTGTCAGAAGGCAGGCTGTCCAGCAGCTaGCGGATCTTATGGTTGGTGTTCTCAGCCACCCAG | + |
|
Preference number: 6 (lower is better) Translates to: TRQVSEGRLSSS*RILWLVFSATQ Trigger: CTGGGTGGCTGAGAACACCAACCATAAGATCCGCAAGCTGCTGGACAGCCTGCCTTCTGACACCTGCCTCGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023994.10 ENSMUST00000111641.2 |
||
| CDS CAA 90 bp | ACTCCAGGAGTCATCTCTTTCAGGGAAGCTCTCTCTGCTTTTCGCTaGAGCCTCCAGTGGATCCTGGGTGCTGTGGCTGGTAGCTTCGGG | + |
|
Preference number: 6 (lower is better) Translates to: TPGVISFREALSAFR*SLQWILGAVAGSFG Trigger: CCCGAAGCTACCAGCCACAGCACCCAGGATCCACTGGAGGCTCAAGCGAAAAGCAGAGAGAGCTTCCCTGAAAGAGATGACTCCTGGAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023994.10 ENSMUST00000111641.2 |
||
| CDS CCA 72 bp | GGTTGTTGGCCAGGTAGAGGGCAGTACTGTAGGCTCTaGGGGACTCCAGGAGTCATCTCTTTCAGGGAAGCT | + |
|
Preference number: 6 (lower is better) Translates to: GCWPGRGQYCRL*GTPGVISFREA Trigger: AGCTTCCCTGAAAGAGATGACTCCTGGAGTCCCCCAGAGCCTACAGTACTGCCCTCTACCTGGCCAACAACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023994.10 ENSMUST00000111641.2 |
||
| CDS CAA 90 bp | TTGAGAAGGACGAGGCAGGTGTCAGAAGGCAGGCTGTCCAGCAGCTaGCGGATCTTATGGTTGGTGTTCTCAGCCACCCAGGTGTTGATG | + |
|
Preference number: 6 (lower is better) Translates to: LRRTRQVSEGRLSSS*RILWLVFSATQVLM Trigger: CATCAACACCTGGGTGGCTGAGAACACCAACCATAAGATCCGCAAGCTGCTGGACAGCCTGCCTTCTGACACCTGCCTCGTCCTTCTCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023994.10 ENSMUST00000111641.2 |
||
| CDS GCA 72 bp | GACTCCAGGAGTCATCTCTTTCAGGGAAGCTCTCTCTaGTTTTCGCTTGAGCCTCCAGTGGATCCTGGGTGC | + |
|
Preference number: 6 (lower is better) Translates to: DSRSHLFQGSSL*FSLEPPVDPGC Trigger: GCACCCAGGATCCACTGGAGGCTCAAGCGAAAAGCAGAGAGAGCTTCCCTGAAAGAGATGACTCCTGGAGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023994.10 ENSMUST00000111641.2 |
||
| CDS GCA 72 bp | GGTGGACACAGGCAAAATCCTTGGGGTAGGAAAGGATaGTCTCCAAGTTGCTCTTGGTGCTGTCTCCAGCCC | + |
|
Preference number: 6 (lower is better) Translates to: GGHRQNPWGRKG*SPSCSWCCLQP Trigger: GGGCTGGAGACAGCACCAAGAGCAACTTGGAGAGCATCCTTTCCTACCCCAAGGATTTTGCCTGTGTCCACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023994.10 ENSMUST00000111641.2 |
||
| CDS CAA 72 bp | GTCATCTCTTTCAGGGAAGCTCTCTCTGCTTTTCGCTaGAGCCTCCAGTGGATCCTGGGTGCTGTGGCTGGT | + |
|
Preference number: 6 (lower is better) Translates to: VISFREALSAFR*SLQWILGAVAG Trigger: ACCAGCCACAGCACCCAGGATCCACTGGAGGCTCAAGCGAAAAGCAGAGAGAGCTTCCCTGAAAGAGATGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023994.10 ENSMUST00000111641.2 |
||
| CDS TCA 72 bp | TCATCTCTTTCAGGGAAGCTCTCTCTGCTTTTCGCTTaGGCCTCCAGTGGATCCTGGGTGCTGTGGCTGGTA | + |
|
Preference number: 6 (lower is better) Translates to: SSLSGKLSLLFA*ASSGSWVLWLV Trigger: TACCAGCCACAGCACCCAGGATCCACTGGAGGCTCAAGCGAAAAGCAGAGAGAGCTTCCCTGAAAGAGATGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023994.10 ENSMUST00000111641.2 |
||
| CDS TCA 72 bp | TTTGCCTCTGAGGAGTCTCTGTCTGAATCAGAGCACTaGGCAAGCGGCTCCGGGCAGAAGGGTTCAGTAGTA | + |
|
Preference number: 6 (lower is better) Translates to: FASEESLSESEH*ASGSGQKGSVV Trigger: TACTACTGAACCCTTCTGCCCGGAGCCGCTTGCTCAGTGCTCTGATTCAGACAGAGACTCCTCAGAGGCAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023994.10 ENSMUST00000111641.2 |
||
| CDS GCA 72 bp | CAGGACTCTGGGGCTGCTTCCATACAGGCTCTGAGATaGATTCACATAGGTGTCCCTTATGGCCAGATCTGG | + |
|
Preference number: 6 (lower is better) Translates to: QDSGAASIQALR*IHIGVPYGQIW Trigger: CCAGATCTGGCCATAAGGGACACCTATGTGAATGCATCTCAGAGCCTGTATGGAAGCAGCCCCAGAGTCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023994.10 ENSMUST00000111641.2 |
||
| CDS CCA 72 bp | TCAGAAGGCAGGCTGTCCAGCAGCTTGCGGATCTTATaGTTGGTGTTCTCAGCCACCCAGGTGTTGATGAGT | + |
|
Preference number: 6 (lower is better) Translates to: SEGRLSSSLRIL*LVFSATQVLMS Trigger: ACTCATCAACACCTGGGTGGCTGAGAACACCAACCATAAGATCCGCAAGCTGCTGGACAGCCTGCCTTCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023994.10 ENSMUST00000111641.2 |
||
| CDS CAA 72 bp | GAAGGCAGGCTGTCCAGCAGCTTGCGGATCTTATGGTaGGTGTTCTCAGCCACCCAGGTGTTGATGAGTTCT | + |
|
Preference number: 6 (lower is better) Translates to: EGRLSSSLRILW*VFSATQVLMSS Trigger: AGAACTCATCAACACCTGGGTGGCTGAGAACACCAACCATAAGATCCGCAAGCTGCTGGACAGCCTGCCTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023994.10 ENSMUST00000111641.2 |
||
| CDS CCA 72 bp | GAGAGCTGCAGCTGTCCCACCTTGGCCTTCAAAGTATaGTCATCGAATTGGGCCACAGGGTACTTTACGCTA | + |
|
Preference number: 6 (lower is better) Translates to: ESCSCPTLAFKV*SSNWATGYFTL Trigger: TAGCGTAAAGTACCCTGTGGCCCAATTCGATGACCATACTTTGAAGGCCAAGGTGGGACAGCTGCAGCTCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023994.10 |
||
| CDS CAA 90 bp | CAGGTGTCAGAAGGCAGGCTGTCCAGCAGCTTGCGGATCTTATGGTaGGTGTTCTCAGCCACCCAGGTGTTGATGAGTTCTAAGTTAGCA | + |
|
Preference number: 6 (lower is better) Translates to: QVSEGRLSSSLRILW*VFSATQVLMSSKLA Trigger: TGCTAACTTAGAACTCATCAACACCTGGGTGGCTGAGAACACCAACCATAAGATCCGCAAGCTGCTGGACAGCCTGCCTTCTGACACCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023994.10 ENSMUST00000111641.2 |
||
| CDS CCA 72 bp | TGTCCCACCTTGGCCTTCAAAGTATGGTCATCGAATTaGGCCACAGGGTACTTTACGCTACTCATCATGGGC | + |
|
Preference number: 6 (lower is better) Translates to: CPTLAFKVWSSN*ATGYFTLLIMG Trigger: GCCCATGATGAGTAGCGTAAAGTACCCTGTGGCCCAATTCGATGACCATACTTTGAAGGCCAAGGTGGGACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023994.10 |
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| CDS CAA 72 bp | CTGTCCCACCTTGGCCTTCAAAGTATGGTCATCGAATaGGGCCACAGGGTACTTTACGCTACTCATCATGGG | + |
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Preference number: 6 (lower is better) Translates to: LSHLGLQSMVIE*GHRVLYATHHG Trigger: CCCATGATGAGTAGCGTAAAGTACCCTGTGGCCCAATTCGATGACCATACTTTGAAGGCCAAGGTGGGACAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023994.10 |
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| CDS CAA 90 bp | GAGCTGCAGCTGTCCCACCTTGGCCTTCAAAGTATGGTCATCGAATaGGGCCACAGGGTACTTTACGCTACTCATCATGGGCACTTTAAT | + |
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Preference number: 6 (lower is better) Translates to: ELQLSHLGLQSMVIE*GHRVLYATHHGHFN Trigger: ATTAAAGTGCCCATGATGAGTAGCGTAAAGTACCCTGTGGCCCAATTCGATGACCATACTTTGAAGGCCAAGGTGGGACAGCTGCAGCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023994.10 |
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| CDS TCA 72 bp | ATGTTATCTTCCACTTGGCACTCAAGTAGACAGCATTaGGAAGGACGAGGCAGGTGTCAGAAGGCAGGCTGT | + |
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Preference number: 6 (lower is better) Translates to: MLSSTWHSSRQH*EGRGRCQKAGC Trigger: ACAGCCTGCCTTCTGACACCTGCCTCGTCCTTCTCAATGCTGTCTACTTGAGTGCCAAGTGGAAGATAACAT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023994.10 ENSMUST00000111641.2 |
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| CDS CCA 72 bp | ACAGTGGGGTTGAGAGCCTTTTCTACATCTTTAAGTTaGTGCTTTGGGAACACGGGTACCACGATCACAAAG | + |
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Preference number: 6 (lower is better) Translates to: TVGLRAFSTSLS*CFGNTGTTITK Trigger: CTTTGTGATCGTGGTACCCGTGTTCCCAAAGCACCAACTTAAAGATGTAGAAAAGGCTCTCAACCCCACTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023994.10 |
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| CDS CCA 72 bp | GTTGAGAGCCTTTTCTACATCTTTAAGTTGGTGCTTTaGGAACACGGGTACCACGATCACAAAGCTCAGGTT | + |
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Preference number: 6 (lower is better) Translates to: VESLFYIFKLVL*EHGYHDHKAQV Trigger: AACCTGAGCTTTGTGATCGTGGTACCCGTGTTCCCAAAGCACCAACTTAAAGATGTAGAAAAGGCTCTCAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023994.10 |
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| CDS CAA 72 bp | TCCAGCTTCTTCATGATGGCCTTGAAGACAGTGGGGTaGAGAGCCTTTTCTACATCTTTAAGTTGGTGCTTT | + |
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Preference number: 6 (lower is better) Translates to: SSFFMMALKTVG*RAFSTSLSWCF Trigger: AAAGCACCAACTTAAAGATGTAGAAAAGGCTCTCAACCCCACTGTCTTCAAGGCCATCATGAAGAAGCTGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023994.10 |
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