Pregenerated sensors for SERPINF2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038224Ensembl transcript IDs: ENSMUST00000043696.9, ENSMUST00000108437.8, ENSMUST00000128330.8, ENSMUST00000142094.2
Found 193 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCAGGCCCCACCCCACCTGCTGCAAGAGAACAGCTTCTACACTGGTaGTGGTCCTTCCGGTCCCACCCTATCCCACAAAGCTGGTTAGAA | + |
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Preference number: 1 (lower is better) Translates to: PGPTPPAAREQLLHW*WSFRSHPIPQSWLE Trigger: TTCTAACCAGCTTTGTGGGATAGGGTGGGACCGGAAGGACCATCACCAGTGTAGAAGCTGTTCTCTTGCAGCAGGTGGGGTGGGGCCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 |
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| 3UTR GCA 90 bp | AGTAGTAAAAGCCATCATGGCCTGAGCCAGCCTGCGAGTCTCCTCTaGAGTTGGGACACTCTTGCAGTGTCCTGGGGACCTCTTGAGGGT | + |
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Preference number: 1 (lower is better) Translates to: SSKSHHGLSQPASLL*SWDTLAVSWGPLEG Trigger: ACCCTCAAGAGGTCCCCAGGACACTGCAAGAGTGTCCCAACTGCAGAGGAGACTCGCAGGCTGGCTCAGGCCATGATGGCTTTTACTACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000142094.2 |
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| 3UTR TCA 90 bp | TGGGCCACCAAAGAGAACAGGTCAGTAGTAAAAGCCATCATGGCCTaGGCCAGCCTGCGAGTCTCCTCTGCAGTTGGGACACTCTTGCAG | + |
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Preference number: 1 (lower is better) Translates to: WATKENRSVVKAIMA*ASLRVSSAVGTLLQ Trigger: CTGCAAGAGTGTCCCAACTGCAGAGGAGACTCGCAGGCTGGCTCAGGCCATGATGGCTTTTACTACTGACCTGTTCTCTTTGGTGGCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142094.2 |
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| 3UTR CCA 90 bp | GCCACACTAAGGGGTGACAGGACAAGGTTGGAGCTGGTAGATGTTTaGGCCACCAAAGAGAACAGGTCAGTAGTAAAAGCCATCATGGCC | + |
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Preference number: 1 (lower is better) Translates to: ATLRGDRTRLELVDV*ATKENRSVVKAIMA Trigger: GGCCATGATGGCTTTTACTACTGACCTGTTCTCTTTGGTGGCCCAAACATCTACCAGCTCCAACCTTGTCCTGTCACCCCTTAGTGTGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000142094.2 |
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| 3UTR GCA 90 bp | ACCCAGGGTGTCTGGAATATGTCTAAAGATGGCCTCTCCAGCCTCTaGTTACAAATGTGGAGGGACCCTAAGTTAGGGACTTGCCTAACC | + |
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Preference number: 1 (lower is better) Translates to: TQGVWNMSKDGLSSL*LQMWRDPKLGTCLT Trigger: GGTTAGGCAAGTCCCTAACTTAGGGTCCCTCCACATTTGTAAGCAGAGGCTGGAGAGGCCATCTTTAGACATATTCCAGACACCCTGGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 |
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| 3UTR GCA 90 bp | TTTCCAGTCAGTTTCACGGGCTTCGCACCAAAGAGCCTTTCCGATTaGTCCAGGAAATCGTCTTTGATGGGAAATCCTTTCTGCAGGTAT | + |
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Preference number: 1 (lower is better) Translates to: FPVSFTGFAPKSLSD*SRKSSLMGNPFCRY Trigger: ATACCTGCAGAAAGGATTTCCCATCAAAGACGATTTCCTGGAGCAATCGGAAAGGCTCTTTGGTGCGAAGCCCGTGAAACTGACTGGAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142094.2 |
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| 3UTR-3UTR TCA 90 bp | GGTGACAGGACACAGGTTGGGGACCTGAATGTCTTCAGCAAGGGACACTCTTGTCAGGAGCTGAGAGGCTaGTCCAGGTGGGGACTCAGG | + |
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Preference number: 2 (lower is better) Translates to: GDRTQVGDLNVFSKGHSCQELRG*SRWGLR Trigger: CCTGAGTCCCCACCTGGATCAGCCTCTCAGCTCCTG...ACAAGAGTGTCCCTTGCTGAAGACATTCAGGTCCCCAACCTGTGTCCTGTCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 |
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| 3UTR-3UTR TCA 90 bp | TCTTGGGAGCTAAAGGGTCCCTTCCTTGCCTCAGTCCCCAAGATTCCTGGCAGGAAGAGTCACAGGAGCTaGGAGGCTGATCCAGGTGGG | + |
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Preference number: 2 (lower is better) Translates to: SWELKGPFLASVPKIPGRKSHRS*EADPGG Trigger: CCCACCTGGATCAGCCTCTCAGCTCCTGTGACTCTT...CCTGCCAGGAATCTTGGGGACTGAGGCAAGGAAGGGACCCTTTAGCTCCCAAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 |
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| 3UTR-3UTR TCA 90 bp | CTCCTGGCAGTGTTGGCATCTCCAAATACCAGAGGGGTGACTTGGGTGACAGGAAAGAGTCACAGGAGCTaGGAGGCTGATCCAGGTGGG | + |
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Preference number: 2 (lower is better) Translates to: LLAVLASPNTRGVTWVTGKSHRS*EADPGG Trigger: CCCACCTGGATCAGCCTCTCAGCTCCTGTGACTCTT...TCCTGTCACCCAAGTCACCCCTCTGGTATTTGGAGATGCCAACACTGCCAGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 |
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| 3UTR-3UTR GCA 90 bp | TCTTGGGAGCTAAAGGGTCCCTTCCTTGCCTCAGTCCCCAAGATTCCTGGCAGGAATGAAGATTCCCCATaGCTGCCTTCCTCCAGGCCC | + |
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Preference number: 2 (lower is better) Translates to: SWELKGPFLASVPKIPGRNEDSP*LPSSRP Trigger: GGGCCTGGAGGAAGGCAGGCATGGGGAATCTTCATT...CCTGCCAGGAATCTTGGGGACTGAGGCAAGGAAGGGACCCTTTAGCTCCCAAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 |
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| 3UTR-3UTR GCA 90 bp | CTAAGGGGTGACAGGACAAGGTTGGAGCTGGTAGATGTTTGGGCCACCAAAGAGTGGCCTGAGCCAGCCTaGGAGTCTCCTCTGCAGTTG | + |
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Preference number: 2 (lower is better) Translates to: LRGDRTRLELVDVWATKEWPEPA*ESPLQL Trigger: CAACTGCAGAGGAGACTCGCAGGCTGGCTCAGGCCA...CTCTTTGGTGGCCCAAACATCTACCAGCTCCAACCTTGTCCTGTCACCCCTTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142094.2 |
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| 3UTR-3UTR TCA 90 bp | GAGAGAGAAGAAGGAGGAAGACTCCTGGCAGTGTTGGCATCTCCAAATACCAGACAGGAGCTGAGAGGCTaGTCCAGGTGGGGACTCAGG | + |
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Preference number: 2 (lower is better) Translates to: EREEGGRLLAVLASPNTRQELRG*SRWGLR Trigger: CCTGAGTCCCCACCTGGATCAGCCTCTCAGCTCCTG...TCTGGTATTTGGAGATGCCAACACTGCCAGGAGTCTTCCTCCTTCTTCTCTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 |
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| 3UTR-3UTR GCA 90 bp | AGACTCCTGGCAGTGTTGGCATCTCCAAATACCAGAGGGGTGACTTGGGTGACAAGGCCCCACCCCACCTaGTGCAAGAGAACAGCTTCT | + |
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Preference number: 2 (lower is better) Translates to: RLLAVLASPNTRGVTWVTRPHPT*CKRTAS Trigger: AGAAGCTGTTCTCTTGCAGCAGGTGGGGTGGGGCCT...TGTCACCCAAGTCACCCCTCTGGTATTTGGAGATGCCAACACTGCCAGGAGTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 |
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| 3UTR-3UTR GCA 90 bp | TTCCCACCCAGGGTGTCTGGAATATGTCTAAAGATGGCCTCTCCAGCCTCTGCTCCCCACCCCACCTGCTaGAAGAGAACAGCTTCTACA | + |
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Preference number: 2 (lower is better) Translates to: FPPRVSGICLKMASPASAPHPTC*KRTAST Trigger: TGTAGAAGCTGTTCTCTTGCAGCAGGTGGGGTGGGG...AGCAGAGGCTGGAGAGGCCATCTTTAGACATATTCCAGACACCCTGGGTGGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 |
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| 3UTR-3UTR GCA 90 bp | AGAAGGAGGAAGACTCCTGGCAGTGTTGGCATCTCCAAATACCAGAGGGGTGACCCCCACCCCACCTGCTaGAAGAGAACAGCTTCTACA | + |
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Preference number: 2 (lower is better) Translates to: RRRKTPGSVGISKYQRGDPHPTC*KRTAST Trigger: TGTAGAAGCTGTTCTCTTGCAGCAGGTGGGGTGGGG...GTCACCCCTCTGGTATTTGGAGATGCCAACACTGCCAGGAGTCTTCCTCCTTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 |
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| 3UTR-3UTR GCA 90 bp | TCCTCCTGCTTTCCAGTCAGTTTCACGGGCTTCGCACCAAAGAGCCTTTCCGATCCTGCGAGTCTCCTCTaGAGTTGGGACACTCTTGCA | + |
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Preference number: 2 (lower is better) Translates to: SSCFPVSFTGFAPKSLSDPASLL*SWDTLA Trigger: TGCAAGAGTGTCCCAACTGCAGAGGAGACTCGCAGG...ATCGGAAAGGCTCTTTGGTGCGAAGCCCGTGAAACTGACTGGAAAGCAGGAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142094.2 |
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| 3UTR CAA 90 bp | AAGACTCCTGGCAGTGTTGGCATCTCCAAATACCAGAGGGGTGACTaGGGTGACAGGACACAGGTTGGGGACCTGAATGTCTTCAGCAAG | + |
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Preference number: 2 (lower is better) Translates to: KTPGSVGISKYQRGD*GDRTQVGDLNVFSK Trigger: CTTGCTGAAGACATTCAGGTCCCCAACCTGTGTCCTGTCACCCAAGTCACCCCTCTGGTATTTGGAGATGCCAACACTGCCAGGAGTCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 |
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| 3UTR-3UTR TCA 90 bp | AAAAGAGTCTTGGGAGCTAAAGGGTCCCTTCCTTGCCTCAGTCCCCAAGATTCCCACAGGTTGGGGACCTaGATGTCTTCAGCAAGGGAC | + |
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Preference number: 2 (lower is better) Translates to: KRVLGAKGSLPCLSPQDSHRLGT*MSSARD Trigger: GTCCCTTGCTGAAGACATTCAGGTCCCCAACCTGTG...GGAATCTTGGGGACTGAGGCAAGGAAGGGACCCTTTAGCTCCCAAGACTCTTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 |
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| 3UTR-3UTR GCA 90 bp | ACACAGGTTGGGGACCTGAATGTCTTCAGCAAGGGACACTCTTGTAGGGTAGGTAATGAAGATTCCCCATaGCTGCCTTCCTCCAGGCCC | + |
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Preference number: 2 (lower is better) Translates to: TQVGDLNVFSKGHSCRVGNEDSP*LPSSRP Trigger: GGGCCTGGAGGAAGGCAGGCATGGGGAATCTTCATT...ACCTACCCTACAAGAGTGTCCCTTGCTGAAGACATTCAGGTCCCCAACCTGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 |
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| 3UTR-3UTR CCA 90 bp | GGCAGTGTTGGCATCTCCAAATACCAGAGGGGTGACTTGGGTGACAGGACACAGCCCACCCAGGGTGTCTaGAATATGTCTAAAGATGGC | + |
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Preference number: 2 (lower is better) Translates to: GSVGISKYQRGDLGDRTQPTQGV*NMSKDG Trigger: GCCATCTTTAGACATATTCCAGACACCCTGGGTGGG...CTGTGTCCTGTCACCCAAGTCACCCCTCTGGTATTTGGAGATGCCAACACTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 |
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| 3UTR-3UTR CCA 90 bp | ATCTCCAAATACCAGAGGGGTGACTTGGGTGACAGGACACAGGTTGGGGACCTGCCCACCCAGGGTGTCTaGAATATGTCTAAAGATGGC | + |
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Preference number: 2 (lower is better) Translates to: ISKYQRGDLGDRTQVGDLPTQGV*NMSKDG Trigger: GCCATCTTTAGACATATTCCAGACACCCTGGGTGGG...CAGGTCCCCAACCTGTGTCCTGTCACCCAAGTCACCCCTCTGGTATTTGGAGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 |
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| 3UTR-3UTR CCA 90 bp | AGGGGTGACAGGACAAGGTTGGAGCTGGTAGATGTTTGGGCCACCAAAGAGAACAGTCTCCTCTGCAGTTaGGACACTCTTGCAGTGTCC | + |
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Preference number: 2 (lower is better) Translates to: RGDRTRLELVDVWATKENSLLCS*DTLAVS Trigger: GGACACTGCAAGAGTGTCCCAACTGCAGAGGAGACT...GTTCTCTTTGGTGGCCCAAACATCTACCAGCTCCAACCTTGTCCTGTCACCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142094.2 |
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| 3UTR CAA 90 bp | GGTCAGCCTCCAACCATGAAGTATAACACCAAGGCCAGTCTAAGCTaGGGAGACCAACACTTGTCTCTCCTTTTCCCACCCAGGGTGTCT | + |
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Preference number: 2 (lower is better) Translates to: GQPPTMKYNTKASLS*GDQHLSLLFPPRVS Trigger: AGACACCCTGGGTGGGAAAAGGAGAGACAAGTGTTGGTCTCCCAAGCTTAGACTGGCCTTGGTGTTATACTTCATGGTTGGAGGCTGACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 |
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| 3UTR-3UTR GCA 90 bp | TCCTGCTTTCCAGTCAGTTTCACGGGCTTCGCACCAAAGAGCCTTTCCGATTGCGATCCTGTGTTCATGTaGAACACTCGATGCAAGCTG | + |
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Preference number: 2 (lower is better) Translates to: SCFPVSFTGFAPKSLSDCDPVFM*NTRCKL Trigger: CAGCTTGCATCGAGTGTTGCACATGAACACAGGATC...GCAATCGGAAAGGCTCTTTGGTGCGAAGCCCGTGAAACTGACTGGAAAGCAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142094.2 |
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| 3UTR-3UTR CCA 90 bp | AAAAGAGTCTTGGGAGCTAAAGGGTCCCTTCCTTGCCTCAGTCCCCAAGATTCCAAGGAGGAAGACTCCTaGCAGTGTTGGCATCTCCAA | + |
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Preference number: 2 (lower is better) Translates to: KRVLGAKGSLPCLSPQDSKEEDS*QCWHLQ Trigger: TTGGAGATGCCAACACTGCCAGGAGTCTTCCTCCTT...GGAATCTTGGGGACTGAGGCAAGGAAGGGACCCTTTAGCTCCCAAGACTCTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 |
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| 3UTR-3UTR TCA 90 bp | GATTGCTCCAGGAAATCGTCTTTGATGGGAAATCCTTTCTGCAGGTATATTCTGAAAGCCATCATGGCCTaGGCCAGCCTGCGAGTCTCC | + |
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Preference number: 2 (lower is better) Translates to: DCSRKSSLMGNPFCRYILKAIMA*ASLRVS Trigger: GGAGACTCGCAGGCTGGCTCAGGCCATGATGGCTTT...CAGAATATACCTGCAGAAAGGATTTCCCATCAAAGACGATTTCCTGGAGCAATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142094.2 |
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| 3UTR-3UTR CCA 90 bp | AAGGCCAGTCTAAGCTTGGGAGACCAACACTTGTCTCTCCTTTTCCCACCCAGGCCTATCCCACAAAGCTaGTTAGAAAGAGTCACAGGA | + |
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Preference number: 2 (lower is better) Translates to: KASLSLGDQHLSLLFPPRPIPQS*LERVTG Trigger: TCCTGTGACTCTTTCTAACCAGCTTTGTGGGATAGG...CCTGGGTGGGAAAAGGAGAGACAAGTGTTGGTCTCCCAAGCTTAGACTGGCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 |
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| 3UTR-3UTR CCA 90 bp | ACAAAAGAGTCTTGGGAGCTAAAGGGTCCCTTCCTTGCCTCAGTCCCCAAGATTGACTCCTGGCAGTGTTaGCATCTCCAAATACCAGAG | + |
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Preference number: 2 (lower is better) Translates to: TKESWELKGPFLASVPKIDSWQC*HLQIPE Trigger: CTCTGGTATTTGGAGATGCCAACACTGCCAGGAGTC...AATCTTGGGGACTGAGGCAAGGAAGGGACCCTTTAGCTCCCAAGACTCTTTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 |
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| 3UTR CAA 90 bp | CTTTCCAGTCAGTTTCACGGGCTTCGCACCAAAGAGCCTTTCCGATaGCTCCAGGAAATCGTCTTTGATGGGAAATCCTTTCTGCAGGTA | + |
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Preference number: 2 (lower is better) Translates to: LSSQFHGLRTKEPFR*LQEIVFDGKSFLQV Trigger: TACCTGCAGAAAGGATTTCCCATCAAAGACGATTTCCTGGAGCAATCGGAAAGGCTCTTTGGTGCGAAGCCCGTGAAACTGACTGGAAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142094.2 |
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| 3UTR-3UTR GCA 90 bp | TTCACGGGCTTCGCACCAAAGAGCCTTTCCGATTGCTCCAGGAAATCGTCTTTGATGTGCAACACTCGATaGAAGCTGTGTAGTGTTTGG | + |
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Preference number: 2 (lower is better) Translates to: FTGFAPKSLSDCSRKSSLMCNTR*KLCSVW Trigger: CCAAACACTACACAGCTTGCATCGAGTGTTGCACAT...CAAAGACGATTTCCTGGAGCAATCGGAAAGGCTCTTTGGTGCGAAGCCCGTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142094.2 |
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| 3UTR-3UTR CCA 90 bp | AACACCAAGGCCAGTCTAAGCTTGGGAGACCAACACTTGTCTCTCCTTTTCCCACTCTGCTTACAAATGTaGAGGGACCCTAAGTTAGGG | + |
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Preference number: 2 (lower is better) Translates to: NTKASLSLGDQHLSLLFPLCLQM*RDPKLG Trigger: CCCTAACTTAGGGTCCCTCCACATTTGTAAGCAGAG...TGGGAAAAGGAGAGACAAGTGTTGGTCTCCCAAGCTTAGACTGGCCTTGGTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 |
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| 3UTR-3UTR CAA 90 bp | GGTGACAGGACACAGGTTGGGGACCTGAATGTCTTCAGCAAGGGACACTCTTGTCACCCCCTGAGCCCCTaGGGAAGAAATGAAGATTCC | + |
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Preference number: 3 (lower is better) Translates to: GDRTQVGDLNVFSKGHSCHPLSP*GRNEDS Trigger: GGAATCTTCATTTCTTCCCAAGGGGCTCAGGGGGTG...ACAAGAGTGTCCCTTGCTGAAGACATTCAGGTCCCCAACCTGTGTCCTGTCACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 |
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| 3UTR-3UTR CAA 90 bp | AAGGCCAGTCTAAGCTTGGGAGACCAACACTTGTCTCTCCTTTTCCCACCCAGGCACCCCCTGAGCCCCTaGGGAAGAAATGAAGATTCC | + |
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Preference number: 3 (lower is better) Translates to: KASLSLGDQHLSLLFPPRHPLSP*GRNEDS Trigger: GGAATCTTCATTTCTTCCCAAGGGGCTCAGGGGGTG...CCTGGGTGGGAAAAGGAGAGACAAGTGTTGGTCTCCCAAGCTTAGACTGGCCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 |
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| 3UTR TCA 72 bp | AAAGAGAACAGGTCAGTAGTAAAAGCCATCATGGCCTaGGCCAGCCTGCGAGTCTCCTCTGCAGTTGGGACA | + |
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Preference number: 3 (lower is better) Translates to: KENRSVVKAIMA*ASLRVSSAVGT Trigger: TGTCCCAACTGCAGAGGAGACTCGCAGGCTGGCTCAGGCCATGATGGCTTTTACTACTGACCTGTTCTCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142094.2 |
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| 3UTR CCA 72 bp | CCAACACTTGTCTCTCCTTTTCCCACCCAGGGTGTCTaGAATATGTCTAAAGATGGCCTCTCCAGCCTCTGC | + |
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Preference number: 3 (lower is better) Translates to: PTLVSPFPTQGV*NMSKDGLSSLC Trigger: GCAGAGGCTGGAGAGGCCATCTTTAGACATATTCCAGACACCCTGGGTGGGAAAAGGAGAGACAAGTGTTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 |
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| 3UTR CCA 72 bp | AGGGGTGACAGGACAAGGTTGGAGCTGGTAGATGTTTaGGCCACCAAAGAGAACAGGTCAGTAGTAAAAGCC | + |
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Preference number: 3 (lower is better) Translates to: RGDRTRLELVDV*ATKENRSVVKA Trigger: GGCTTTTACTACTGACCTGTTCTCTTTGGTGGCCCAAACATCTACCAGCTCCAACCTTGTCCTGTCACCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000142094.2 |
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| 3UTR-3UTR CAA 90 bp | AAAGAGCCTTTCCGATTGCTCCAGGAAATCGTCTTTGATGGGAAATCCTTTCTGGAGTCTCCTCTGCAGTaGGGACACTCTTGCAGTGTC | + |
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Preference number: 3 (lower is better) Translates to: KEPFRLLQEIVFDGKSFLESPLQ*GHSCSV Trigger: GACACTGCAAGAGTGTCCCAACTGCAGAGGAGACTC...CAGAAAGGATTTCCCATCAAAGACGATTTCCTGGAGCAATCGGAAAGGCTCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142094.2 |
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| 3UTR GCA 72 bp | GTCTGGAATATGTCTAAAGATGGCCTCTCCAGCCTCTaGTTACAAATGTGGAGGGACCCTAAGTTAGGGACT | + |
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Preference number: 3 (lower is better) Translates to: VWNMSKDGLSSL*LQMWRDPKLGT Trigger: AGTCCCTAACTTAGGGTCCCTCCACATTTGTAAGCAGAGGCTGGAGAGGCCATCTTTAGACATATTCCAGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 |
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| 3UTR GCA 72 bp | AGTTTCACGGGCTTCGCACCAAAGAGCCTTTCCGATTaGTCCAGGAAATCGTCTTTGATGGGAAATCCTTTC | + |
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Preference number: 3 (lower is better) Translates to: SFTGFAPKSLSD*SRKSSLMGNPF Trigger: GAAAGGATTTCCCATCAAAGACGATTTCCTGGAGCAATCGGAAAGGCTCTTTGGTGCGAAGCCCGTGAAACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142094.2 |
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| 3UTR-3UTR CAA 90 bp | AAAGAGCCTTTCCGATTGCTCCAGGAAATCGTCTTTGATGGGAAATCCTTTCTGGGAGCTGGTAGATGTTaGGGCCACCAAAGAGAACAG | + |
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Preference number: 3 (lower is better) Translates to: KEPFRLLQEIVFDGKSFLGAGRC*GHQREQ Trigger: CTGTTCTCTTTGGTGGCCCAAACATCTACCAGCTCC...CAGAAAGGATTTCCCATCAAAGACGATTTCCTGGAGCAATCGGAAAGGCTCTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142094.2 |
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| 3UTR TCA 72 bp | CAAAGAGCCTTTCCGATTGCTCCAGGAAATCGTCTTTaGTGGGAAATCCTTTCTGCAGGTATATTCTGGCAG | + |
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Preference number: 3 (lower is better) Translates to: QRAFPIAPGNRL*WEILSAGIFWQ Trigger: CTGCCAGAATATACCTGCAGAAAGGATTTCCCATCAAAGACGATTTCCTGGAGCAATCGGAAAGGCTCTTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142094.2 |
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| CDS-3UTR TCA 90 bp | TTGGCATCTCCAAATACCAGAGGGGTGACTTGGGTGACAGGACACAGGTTGGGGGCAGGCCCAGTTGGCTaGGGGTGGCCACCAGGTCCA | + |
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Preference number: 4 (lower is better) Translates to: LASPNTRGVTWVTGHRLGAGPVG*GWPPGP Trigger: TGGACCTGGTGGCCACCCTCAGCCAACTGGGCCTGC...CCCCAACCTGTGTCCTGTCACCCAAGTCACCCCTCTGGTATTTGGAGATGCCAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 |
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| CDS-3UTR TCA 90 bp | TTGGCATCTCCAAATACCAGAGGGGTGACTTGGGTGACAGGACACAGGTTGGGGGCAGGCAGGACAAGCTaGGTACGAGGAGCCCCCGGA | + |
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Preference number: 4 (lower is better) Translates to: LASPNTRGVTWVTGHRLGAGRTS*VRGAPG Trigger: TCCGGGGGCTCCTCGTACTCAGCTTGTCCTGCCTGC...CCCCAACCTGTGTCCTGTCACCCAAGTCACCCCTCTGGTATTTGGAGATGCCAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 |
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| CDS-3UTR TCA 90 bp | TCCTCCAGGCCCCACCCCACCTGCTGCAAGAGAACAGCTTCTACACTGGTGATGAAAGCCATCATGGCCTaGGCCAGCCTGCGAGTCTCC | + |
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Preference number: 4 (lower is better) Translates to: SSRPHPTCCKRTASTLVMKAIMA*ASLRVS Trigger: GGAGACTCGCAGGCTGGCTCAGGCCATGATGGCTTT...CATCACCAGTGTAGAAGCTGTTCTCTTGCAGCAGGTGGGGTGGGGCCTGGAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 |
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| CDS-3UTR TCA 90 bp | AAGGCCAGTCTAAGCTTGGGAGACCAACACTTGTCTCTCCTTTTCCCACCCAGGGCAGGCCCAGTTGGCTaGGGGTGGCCACCAGGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: KASLSLGDQHLSLLFPPRAGPVG*GWPPGP Trigger: TGGACCTGGTGGCCACCCTCAGCCAACTGGGCCTGC...CCTGGGTGGGAAAAGGAGAGACAAGTGTTGGTCTCCCAAGCTTAGACTGGCCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 |
||
| CDS-3UTR GCA 90 bp | TCCTCCAGGCCCCACCCCACCTGCTGCAAGAGAACAGCTTCTACACTGGTGATGTGGCCTGAGCCAGCCTaGGAGTCTCCTCTGCAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: SSRPHPTCCKRTASTLVMWPEPA*ESPLQL Trigger: CAACTGCAGAGGAGACTCGCAGGCTGGCTCAGGCCA...CATCACCAGTGTAGAAGCTGTTCTCTTGCAGCAGGTGGGGTGGGGCCTGGAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 |
||
| CDS-3UTR CCA 90 bp | TCTTGGGAGCTAAAGGGTCCCTTCCTTGCCTCAGTCCCCAAGATTCCTGGCAGGAGGGGCAGCTTCTGCTaGGCCTGCTCACTCACTGGC | + |
|
Preference number: 4 (lower is better) Translates to: SWELKGPFLASVPKIPGRRGSFC*ACSLTG Trigger: GCCAGTGAGTGAGCAGGCCCAGCAGAAGCTGCCCCT...CCTGCCAGGAATCTTGGGGACTGAGGCAAGGAAGGGACCCTTTAGCTCCCAAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 |
||
| CDS-3UTR CCA 90 bp | GTCCTTCCGGTCCCACCCTATCCCACAAAGCTGGTTAGAAAGAGTCACAGGAGCCGCTGTTCCTGGAGCTaGGGCAGCGCGCTGGGGTTA | + |
|
Preference number: 4 (lower is better) Translates to: VLPVPPYPTKLVRKSHRSRCSWS*GSALGL Trigger: TAACCCCAGCGCGCTGCCCCAGCTCCAGGAACAGCG...GCTCCTGTGACTCTTTCTAACCAGCTTTGTGGGATAGGGTGGGACCGGAAGGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 |
||
| CDS-3UTR TCA 90 bp | TGGTTAGAAAGAGTCACAGGAGCTGAGAGGCTGATCCAGGTGGGGACTCAGGATGCAGGCAGGACAAGCTaGGTACGAGGAGCCCCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: WLERVTGAERLIQVGTQDAGRTS*VRGAPG Trigger: TCCGGGGGCTCCTCGTACTCAGCTTGTCCTGCCTGC...ATCCTGAGTCCCCACCTGGATCAGCCTCTCAGCTCCTGTGACTCTTTCTAACCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 |
||
| CDS-3UTR TCA 90 bp | TCCTGCTTTCCAGTCAGTTTCACGGGCTTCGCACCAAAGAGCCTTTCCGATTGCGCAGGCAGGACAAGCTaGGTACGAGGAGCCCCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: SCFPVSFTGFAPKSLSDCAGRTS*VRGAPG Trigger: TCCGGGGGCTCCTCGTACTCAGCTTGTCCTGCCTGC...GCAATCGGAAAGGCTCTTTGGTGCGAAGCCCGTGAAACTGACTGGAAAGCAGGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000142094.2 |
||
| CDS-3UTR CCA 90 bp | TGGCAGCCAGTCGGATTGTCCCTGGGCCTAGGTTCTGGTAGAAATGGCTCAGTAAGGGGCAGCTTCTGCTaGGCCTGCTCACTCACTGGC | + |
|
Preference number: 4 (lower is better) Translates to: WQPVGLSLGLGSGRNGSVRGSFC*ACSLTG Trigger: GCCAGTGAGTGAGCAGGCCCAGCAGAAGCTGCCCCT...TACTGAGCCATTTCTACCAGAACCTAGGCCCAGGGACAATCCGACTGGCTGCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142094.2 |
||
| CDS-3UTR GCA 90 bp | TTGGCATCTCCAAATACCAGAGGGGTGACTTGGGTGACAGGACACAGGTTGGGGTGGCCTGAGCCAGCCTaGGAGTCTCCTCTGCAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: LASPNTRGVTWVTGHRLGWPEPA*ESPLQL Trigger: CAACTGCAGAGGAGACTCGCAGGCTGGCTCAGGCCA...CCCCAACCTGTGTCCTGTCACCCAAGTCACCCCTCTGGTATTTGGAGATGCCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 |
||
| CDS-3UTR CCA 90 bp | TGGTTAGAAAGAGTCACAGGAGCTGAGAGGCTGATCCAGGTGGGGACTCAGGATAGGGGCAGCTTCTGCTaGGCCTGCTCACTCACTGGC | + |
|
Preference number: 4 (lower is better) Translates to: WLERVTGAERLIQVGTQDRGSFC*ACSLTG Trigger: GCCAGTGAGTGAGCAGGCCCAGCAGAAGCTGCCCCT...ATCCTGAGTCCCCACCTGGATCAGCCTCTCAGCTCCTGTGACTCTTTCTAACCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 |
||
| CDS-3UTR CCA 90 bp | AAAGAGTCTTGGGAGCTAAAGGGTCCCTTCCTTGCCTCAGTCCCCAAGATTCCTCGCTGTTCCTGGAGCTaGGGCAGCGCGCTGGGGTTA | + |
|
Preference number: 4 (lower is better) Translates to: KESWELKGPFLASVPKIPRCSWS*GSALGL Trigger: TAACCCCAGCGCGCTGCCCCAGCTCCAGGAACAGCG...AGGAATCTTGGGGACTGAGGCAAGGAAGGGACCCTTTAGCTCCCAAGACTCTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 |
||
| CDS-3UTR TCA 90 bp | TCCTCCAGGCCCCACCCCACCTGCTGCAAGAGAACAGCTTCTACACTGGTGATGCCTTCACCCATTGGTTaGTGTTCGCCAGGTCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SSRPHPTCCKRTASTLVMPSPIG*CSPGLP Trigger: AGGAAGACCTGGCGAACATCAACCAATGGGTGAAGG...CATCACCAGTGTAGAAGCTGTTCTCTTGCAGCAGGTGGGGTGGGGCCTGGAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 |
||
| CDS-3UTR TCA 90 bp | CTCCTGGCAGTGTTGGCATCTCCAAATACCAGAGGGGTGACTTGGGTGACAGGAGAAAGTGGATGGCGTTaGGGAGAAGCAGCACGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: LLAVLASPNTRGVTWVTGESGWR*GEAARC Trigger: GCACCGTGCTGCTTCTCCTCAACGCCATCCACTTTC...TCCTGTCACCCAAGTCACCCCTCTGGTATTTGGAGATGCCAACACTGCCAGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 |
||
| CDS-3UTR GCA 90 bp | GTCCTTCCGGTCCCACCCTATCCCACAAAGCTGGTTAGAAAGAGTCACAGGAGCTTGGTGGGCCTCTCCTaGAGCGAGGGATGGTACAGA | + |
|
Preference number: 4 (lower is better) Translates to: VLPVPPYPTKLVRKSHRSLVGLS*SEGWYR Trigger: TCTGTACCATCCCTCGCTGCAGGAGAGGCCCACCAA...GCTCCTGTGACTCTTTCTAACCAGCTTTGTGGGATAGGGTGGGACCGGAAGGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 |
||
| CDS-3UTR CCA 90 bp | AAGGCCAGTCTAAGCTTGGGAGACCAACACTTGTCTCTCCTTTTCCCACCCAGGCGAAGGTCTGGGCCCTaGAACAATTCCTGCAGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: KASLSLGDQHLSLLFPPRRRSGP*NNSCRP Trigger: GGGCCTGCAGGAATTGTTCCAGGGCCCAGACCTTCG...CCTGGGTGGGAAAAGGAGAGACAAGTGTTGGTCTCCCAAGCTTAGACTGGCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 |
||
| CDS-3UTR CCA 90 bp | AAGACTCCTGGCAGTGTTGGCATCTCCAAATACCAGAGGGGTGACTTGGGTGACCGAAGGTCTGGGCCCTaGAACAATTCCTGCAGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: KTPGSVGISKYQRGDLGDRRSGP*NNSCRP Trigger: GGGCCTGCAGGAATTGTTCCAGGGCCCAGACCTTCG...GTCACCCAAGTCACCCCTCTGGTATTTGGAGATGCCAACACTGCCAGGAGTCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 |
||
| CDS-3UTR TCA 90 bp | CTCCTGGCAGTGTTGGCATCTCCAAATACCAGAGGGGTGACTTGGGTGACAGGAGTCCTCCAGAAACCGTaGAAGTGGATGGCGTTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LLAVLASPNTRGVTWVTGVLQKP*KWMALR Trigger: CCTCAACGCCATCCACTTTCACGGTTTCTGGAGGAC...TCCTGTCACCCAAGTCACCCCTCTGGTATTTGGAGATGCCAACACTGCCAGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 |
||
| CDS-3UTR GCA 90 bp | TCTTGGGAGCTAAAGGGTCCCTTCCTTGCCTCAGTCCCCAAGATTCCTGGCAGGGCCAGGTCTTCCTCCTaGTTTCCAGTCAGTTTCACG | + |
|
Preference number: 4 (lower is better) Translates to: SWELKGPFLASVPKIPGRARSSS*FPVSFT Trigger: CGTGAAACTGACTGGAAAGCAGGAGGAAGACCTGGC...CCTGCCAGGAATCTTGGGGACTGAGGCAAGGAAGGGACCCTTTAGCTCCCAAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 |
||
| CDS-3UTR CCA 90 bp | TCTTGGGAGCTAAAGGGTCCCTTCCTTGCCTCAGTCCCCAAGATTCCTGGCAGGGCCTCCTTCACCCATTaGTTGATGTTCGCCAGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: SWELKGPFLASVPKIPGRASFTH*LMFARS Trigger: AGACCTGGCGAACATCAACCAATGGGTGAAGGAGGC...CCTGCCAGGAATCTTGGGGACTGAGGCAAGGAAGGGACCCTTTAGCTCCCAAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 |
||
| 3UTR CAA 72 bp | GGCAGTGTTGGCATCTCCAAATACCAGAGGGGTGACTaGGGTGACAGGACACAGGTTGGGGACCTGAATGTC | + |
|
Preference number: 4 (lower is better) Translates to: GSVGISKYQRGD*GDRTQVGDLNV Trigger: GACATTCAGGTCCCCAACCTGTGTCCTGTCACCCAAGTCACCCCTCTGGTATTTGGAGATGCCAACACTGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 |
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| CDS-3UTR TCA 90 bp | AGAAGGAGGAAGACTCCTGGCAGTGTTGGCATCTCCAAATACCAGAGGGGTGACAGGGTCGGTTCACAGTaGAGGAGGAGAGGGACATTC | + |
|
Preference number: 4 (lower is better) Translates to: RRRKTPGSVGISKYQRGDRVGSQ*RRRGTF Trigger: GAATGTCCCTCTCCTCCTTCACTGTGAACCGACCCT...GTCACCCCTCTGGTATTTGGAGATGCCAACACTGCCAGGAGTCTTCCTCCTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 |
||
| CDS-3UTR GCA 90 bp | GTGATGGTCCTTCCGGTCCCACCCTATCCCACAAAGCTGGTTAGAAAGAGTCACCCTGCGAGTCTCCTCTaGAGTTGGGACACTCTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: VMVLPVPPYPTKLVRKSHPASLL*SWDTLA Trigger: TGCAAGAGTGTCCCAACTGCAGAGGAGACTCGCAGG...GTGACTCTTTCTAACCAGCTTTGTGGGATAGGGTGGGACCGGAAGGACCATCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 |
||
| CDS-3UTR GCA 90 bp | AGGGACTTGCCTAACCTACCTCTAGCCAAAACTGTGTCCACAAGTGCCAGCCCACCTGCGAGTCTCCTCTaGAGTTGGGACACTCTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: RDLPNLPLAKTVSTSASPPASLL*SWDTLA Trigger: TGCAAGAGTGTCCCAACTGCAGAGGAGACTCGCAGG...TGGGCTGGCACTTGTGGACACAGTTTTGGCTAGAGGTAGGTTAGGCAAGTCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 |
||
| CDS-3UTR GCA 90 bp | TTGGCATCTCCAAATACCAGAGGGGTGACTTGGGTGACAGGACACAGGTTGGGGAAATGGCTCAGTAGATaGGGGAGGCAGGATCCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: LASPNTRGVTWVTGHRLGKWLSR*GRQDPV Trigger: CACAGGATCCTGCCTCCCGCATCTACTGAGCCATTT...CCCCAACCTGTGTCCTGTCACCCAAGTCACCCCTCTGGTATTTGGAGATGCCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 |
||
| CDS-3UTR GCA 90 bp | ATCTCCAAATACCAGAGGGGTGACTTGGGTGACAGGACACAGGTTGGGGACCTGAAATGGCTCAGTAGATaGGGGAGGCAGGATCCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: ISKYQRGDLGDRTQVGDLKWLSR*GRQDPV Trigger: CACAGGATCCTGCCTCCCGCATCTACTGAGCCATTT...CAGGTCCCCAACCTGTGTCCTGTCACCCAAGTCACCCCTCTGGTATTTGGAGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 |
||
| CDS-3UTR GCA 90 bp | ATCTCCAAATACCAGAGGGGTGACTTGGGTGACAGGACACAGGTTGGGGACCTGTTCCTCCATGCGGGGTaGAAGTTTCAAGTCAGGACC | + |
|
Preference number: 4 (lower is better) Translates to: ISKYQRGDLGDRTQVGDLFLHAG*KFQVRT Trigger: GGTCCTGACTTGAAACTTGCACCCCGCATGGAGGAA...CAGGTCCCCAACCTGTGTCCTGTCACCCAAGTCACCCCTCTGGTATTTGGAGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 |
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| CDS-3UTR CCA 90 bp | TTCCCACCCAGGGTGTCTGGAATATGTCTAAAGATGGCCTCTCCAGCCTCTGCTACTCTTGCAGTGTCCTaGGGACCTCTTGAGGGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: FPPRVSGICLKMASPASATLAVS*GPLEGS Trigger: GCTACCCTCAAGAGGTCCCCAGGACACTGCAAGAGT...AGCAGAGGCTGGAGAGGCCATCTTTAGACATATTCCAGACACCCTGGGTGGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 |
||
| CDS-3UTR CCA 90 bp | TTGGCATCTCCAAATACCAGAGGGGTGACTTGGGTGACAGGACACAGGTTGGGGAGTCTCCTCTGCAGTTaGGACACTCTTGCAGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LASPNTRGVTWVTGHRLGSLLCS*DTLAVS Trigger: GGACACTGCAAGAGTGTCCCAACTGCAGAGGAGACT...CCCCAACCTGTGTCCTGTCACCCAAGTCACCCCTCTGGTATTTGGAGATGCCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 |
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| CDS-3UTR CCA 90 bp | TTGGCATCTCCAAATACCAGAGGGGTGACTTGGGTGACAGGACACAGGTTGGGGGCCTCCTTCACCCATTaGTTGATGTTCGCCAGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LASPNTRGVTWVTGHRLGASFTH*LMFARS Trigger: AGACCTGGCGAACATCAACCAATGGGTGAAGGAGGC...CCCCAACCTGTGTCCTGTCACCCAAGTCACCCCTCTGGTATTTGGAGATGCCAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 |
||
| CDS-3UTR CCA 90 bp | TCCTCCAGGCCCCACCCCACCTGCTGCAAGAGAACAGCTTCTACACTGGTGATGAACCGCTCATCCAGGTaGAAGAAATCTTTCTGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SSRPHPTCCKRTASTLVMNRSSR*KKSFWV Trigger: CACCCAGAAAGATTTCTTCCACCTGGATGAGCGGTT...CATCACCAGTGTAGAAGCTGTTCTCTTGCAGCAGGTGGGGTGGGGCCTGGAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 |
||
| CDS-3UTR CCA 90 bp | AAGGCCAGTCTAAGCTTGGGAGACCAACACTTGTCTCTCCTTTTCCCACCCAGGTCCTGCAGCGAGGGATaGTACAGAGTATCCCAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: KASLSLGDQHLSLLFPPRSCSEG*YRVSQV Trigger: GACCTGGGATACTCTGTACCATCCCTCGCTGCAGGA...CCTGGGTGGGAAAAGGAGAGACAAGTGTTGGTCTCCCAAGCTTAGACTGGCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 |
||
| 3UTR CAA 72 bp | AGTGCTAGGGCCACACTAAGGGGTGACAGGACAAGGTaGGAGCTGGTAGATGTTTGGGCCACCAAAGAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: SARATLRGDRTR*ELVDVWATKEN Trigger: GTTCTCTTTGGTGGCCCAAACATCTACCAGCTCCAACCTTGTCCTGTCACCCCTTAGTGTGGCCCTAGCACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142094.2 |
||
| CDS-3UTR TCA 90 bp | TCTAAAGATGGCCTCTCCAGCCTCTGCTTACAAATGTGGAGGGACCCTAAGTTAAAAGCCATCATGGCCTaGGCCAGCCTGCGAGTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SKDGLSSLCLQMWRDPKLKAIMA*ASLRVS Trigger: GGAGACTCGCAGGCTGGCTCAGGCCATGATGGCTTT...TAACTTAGGGTCCCTCCACATTTGTAAGCAGAGGCTGGAGAGGCCATCTTTAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 |
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| CDS-3UTR TCA 90 bp | CTACCTCTAGCCAAAACTGTGTCCACAAGTGCCAGCCCACAAAAGATCACCCCCCCTTCACCCATTGGTTaGTGTTCGCCAGGTCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LPLAKTVSTSASPQKITPPSPIG*CSPGLP Trigger: AGGAAGACCTGGCGAACATCAACCAATGGGTGAAGG...GGGGGTGATCTTTTGTGGGCTGGCACTTGTGGACACAGTTTTGGCTAGAGGTAG 53% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 |
||
| CDS-3UTR TCA 90 bp | AACACCAAGGCCAGTCTAAGCTTGGGAGACCAACACTTGTCTCTCCTTTTCCCAGAAAGTGGATGGCGTTaGGGAGAAGCAGCACGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: NTKASLSLGDQHLSLLFPESGWR*GEAARC Trigger: GCACCGTGCTGCTTCTCCTCAACGCCATCCACTTTC...TGGGAAAAGGAGAGACAAGTGTTGGTCTCCCAAGCTTAGACTGGCCTTGGTGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 |
||
| CDS-3UTR GCA 90 bp | TCCTCCAGGCCCCACCCCACCTGCTGCAAGAGAACAGCTTCTACACTGGTGATGATGTGCAACACTCGATaGAAGCTGTGTAGTGTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: SSRPHPTCCKRTASTLVMMCNTR*KLCSVW Trigger: CCAAACACTACACAGCTTGCATCGAGTGTTGCACAT...CATCACCAGTGTAGAAGCTGTTCTCTTGCAGCAGGTGGGGTGGGGCCTGGAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 |
||
| CDS-3UTR GCA 90 bp | AGAGAGAAGAAGGAGGAAGACTCCTGGCAGTGTTGGCATCTCCAAATACCAGAGTTGGTGGGCCTCTCCTaGAGCGAGGGATGGTACAGA | + |
|
Preference number: 4 (lower is better) Translates to: REKKEEDSWQCWHLQIPELVGLS*SEGWYR Trigger: TCTGTACCATCCCTCGCTGCAGGAGAGGCCCACCAA...CTCTGGTATTTGGAGATGCCAACACTGCCAGGAGTCTTCCTCCTTCTTCTCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 |
||
| CDS-3UTR GCA 90 bp | GTGATGGTCCTTCCGGTCCCACCCTATCCCACAAAGCTGGTTAGAAAGAGTCACAGGTCCAGCTGCTGTTaGAGATGGAGTTTAGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: VMVLPVPPYPTKLVRKSHRSSCC*RWSLGS Trigger: GCTGCCTAAACTCCATCTGCAACAGCAGCTGGACCT...GTGACTCTTTCTAACCAGCTTTGTGGGATAGGGTGGGACCGGAAGGACCATCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 |
||
| CDS-3UTR GCA 90 bp | AAGGCCAGTCTAAGCTTGGGAGACCAACACTTGTCTCTCCTTTTCCCACCCAGGGACACCACCAGATTCTaGTCAGAGATCCCACGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: KASLSLGDQHLSLLFPPRDTTRF*SEIPRR Trigger: CCTTCGTGGGATCTCTGAGCAGAATCTGGTGGTGTC...CCTGGGTGGGAAAAGGAGAGACAAGTGTTGGTCTCCCAAGCTTAGACTGGCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 |
||
| CDS-3UTR GCA 90 bp | AGACTCCTGGCAGTGTTGGCATCTCCAAATACCAGAGGGGTGACTTGGGTGACAGACACCACCAGATTCTaGTCAGAGATCCCACGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: RLLAVLASPNTRGVTWVTDTTRF*SEIPRR Trigger: CCTTCGTGGGATCTCTGAGCAGAATCTGGTGGTGTC...TGTCACCCAAGTCACCCCTCTGGTATTTGGAGATGCCAACACTGCCAGGAGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 |
||
| CDS-3UTR GCA 90 bp | AAGACTCCTGGCAGTGTTGGCATCTCCAAATACCAGAGGGGTGACTTGGGTGACTTCCTCCATGCGGGGTaGAAGTTTCAAGTCAGGACC | + |
|
Preference number: 4 (lower is better) Translates to: KTPGSVGISKYQRGDLGDFLHAG*KFQVRT Trigger: GGTCCTGACTTGAAACTTGCACCCCGCATGGAGGAA...GTCACCCAAGTCACCCCTCTGGTATTTGGAGATGCCAACACTGCCAGGAGTCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 |
||
| CDS-3UTR CCA 90 bp | AGAAGGAGGAAGACTCCTGGCAGTGTTGGCATCTCCAAATACCAGAGGGGTGACAGTCTCCTCTGCAGTTaGGACACTCTTGCAGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: RRRKTPGSVGISKYQRGDSLLCS*DTLAVS Trigger: GGACACTGCAAGAGTGTCCCAACTGCAGAGGAGACT...GTCACCCCTCTGGTATTTGGAGATGCCAACACTGCCAGGAGTCTTCCTCCTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 |
||
| CDS-3UTR CCA 90 bp | GTCCTTCCGGTCCCACCCTATCCCACAAAGCTGGTTAGAAAGAGTCACAGGAGCTCTGCAGGTATATTCTaGCAGCCAGTCGGATTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: VLPVPPYPTKLVRKSHRSSAGIF*QPVGLS Trigger: GGACAATCCGACTGGCTGCCAGAATATACCTGCAGA...GCTCCTGTGACTCTTTCTAACCAGCTTTGTGGGATAGGGTGGGACCGGAAGGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 |
||
| CDS-3UTR CCA 90 bp | CTACCTCTAGCCAAAACTGTGTCCACAAGTGCCAGCCCACAAAAGATCACCCCCGGCTCGGGTCAAACTTaGTCCTCCAGAAACCGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: LPLAKTVSTSASPQKITPGSGQT*SSRNRE Trigger: TTCACGGTTTCTGGAGGACCAAGTTTGACCCGAGCC...GGGGGTGATCTTTTGTGGGCTGGCACTTGTGGACACAGTTTTGGCTAGAGGTAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 |
||
| CDS-3UTR CCA 90 bp | AAAGAGTCTTGGGAGCTAAAGGGTCCCTTCCTTGCCTCAGTCCCCAAGATTCCTTCCTGCAGCGAGGGATaGTACAGAGTATCCCAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: KESWELKGPFLASVPKIPSCSEG*YRVSQV Trigger: GACCTGGGATACTCTGTACCATCCCTCGCTGCAGGA...AGGAATCTTGGGGACTGAGGCAAGGAAGGGACCCTTTAGCTCCCAAGACTCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 |
||
| 3UTR CAA 72 bp | CAAGAGAGAGAAGAAGGAGGAAGACTCCTGGCAGTGTaGGCATCTCCAAATACCAGAGGGGTGACTTGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: QEREEGGRLLAV*ASPNTRGVTWV Trigger: CACCCAAGTCACCCCTCTGGTATTTGGAGATGCCAACACTGCCAGGAGTCTTCCTCCTTCTTCTCTCTCTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 |
||
| CDS-3UTR TCA 90 bp | ACAAAAGAGTCTTGGGAGCTAAAGGGTCCCTTCCTTGCCTCAGTCCCCAAGATTGTCCTCCAGAAACCGTaGAAGTGGATGGCGTTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: TKESWELKGPFLASVPKIVLQKP*KWMALR Trigger: CCTCAACGCCATCCACTTTCACGGTTTCTGGAGGAC...AATCTTGGGGACTGAGGCAAGGAAGGGACCCTTTAGCTCCCAAGACTCTTTTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 |
||
| CDS-3UTR TCA 90 bp | TTCCCACCCAGGGTGTCTGGAATATGTCTAAAGATGGCCTCTCCAGCCTCTGCTAGAAATCTTTCTGGGTaGGGCTCGGGTCAAACTTGG | + |
|
Preference number: 4 (lower is better) Translates to: FPPRVSGICLKMASPASARNLSG*GSGQTW Trigger: CCAAGTTTGACCCGAGCCTCACCCAGAAAGATTTCT...AGCAGAGGCTGGAGAGGCCATCTTTAGACATATTCCAGACACCCTGGGTGGGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 |
||
| CDS-3UTR TCA 90 bp | TGGTTAGAAAGAGTCACAGGAGCTGAGAGGCTGATCCAGGTGGGGACTCAGGATAGAAATCTTTCTGGGTaGGGCTCGGGTCAAACTTGG | + |
|
Preference number: 4 (lower is better) Translates to: WLERVTGAERLIQVGTQDRNLSG*GSGQTW Trigger: CCAAGTTTGACCCGAGCCTCACCCAGAAAGATTTCT...ATCCTGAGTCCCCACCTGGATCAGCCTCTCAGCTCCTGTGACTCTTTCTAACCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 |
||
| CDS-3UTR TCA 90 bp | GAGAGAGAAGAAGGAGGAAGACTCCTGGCAGTGTTGGCATCTCCAAATACCAGAAGGGTCGGTTCACAGTaGAGGAGGAGAGGGACATTC | + |
|
Preference number: 4 (lower is better) Translates to: EREEGGRLLAVLASPNTRRVGSQ*RRRGTF Trigger: GAATGTCCCTCTCCTCCTTCACTGTGAACCGACCCT...TCTGGTATTTGGAGATGCCAACACTGCCAGGAGTCTTCCTCCTTCTTCTCTCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 |
||
| CDS-3UTR GCA 90 bp | CTCCTGGCAGTGTTGGCATCTCCAAATACCAGAGGGGTGACTTGGGTGACAGGAGATCCTGTGTTCATGTaGAACACTCGATGCAAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LLAVLASPNTRGVTWVTGDPVFM*NTRCKL Trigger: CAGCTTGCATCGAGTGTTGCACATGAACACAGGATC...TCCTGTCACCCAAGTCACCCCTCTGGTATTTGGAGATGCCAACACTGCCAGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 |
||
| CDS-3UTR CCA 90 bp | GAGAGAGAAGAAGGAGGAAGACTCCTGGCAGTGTTGGCATCTCCAAATACCAGAACTCTTGCAGTGTCCTaGGGACCTCTTGAGGGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: EREEGGRLLAVLASPNTRTLAVS*GPLEGS Trigger: GCTACCCTCAAGAGGTCCCCAGGACACTGCAAGAGT...TCTGGTATTTGGAGATGCCAACACTGCCAGGAGTCTTCCTCCTTCTTCTCTCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 |
||
| CDS-3UTR TCA 90 bp | GTCCTTCCGGTCCCACCCTATCCCACAAAGCTGGTTAGAAAGAGTCACAGGAGCCCAGGAAATCGTCTTTaGTGGGAAATCCTTTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: VLPVPPYPTKLVRKSHRSPGNRL*WEILSA Trigger: TGCAGAAAGGATTTCCCATCAAAGACGATTTCCTGG...GCTCCTGTGACTCTTTCTAACCAGCTTTGTGGGATAGGGTGGGACCGGAAGGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 |
||
| CDS-3UTR GCA 90 bp | AGGGACTTGCCTAACCTACCTCTAGCCAAAACTGTGTCCACAAGTGCCAGCCCAGATCCTGTGTTCATGTaGAACACTCGATGCAAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: RDLPNLPLAKTVSTSASPDPVFM*NTRCKL Trigger: CAGCTTGCATCGAGTGTTGCACATGAACACAGGATC...TGGGCTGGCACTTGTGGACACAGTTTTGGCTAGAGGTAGGTTAGGCAAGTCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 |
||
| CDS-3UTR GCA 90 bp | TACAAAAGAGTCTTGGGAGCTAAAGGGTCCCTTCCTTGCCTCAGTCCCCAAGATGCCAGGTCTTCCTCCTaGTTTCCAGTCAGTTTCACG | + |
|
Preference number: 4 (lower is better) Translates to: YKRVLGAKGSLPCLSPQDARSSS*FPVSFT Trigger: CGTGAAACTGACTGGAAAGCAGGAGGAAGACCTGGC...ATCTTGGGGACTGAGGCAAGGAAGGGACCCTTTAGCTCCCAAGACTCTTTTGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 |
||
| CDS-3UTR GCA 90 bp | AAAAGAGTCTTGGGAGCTAAAGGGTCCCTTCCTTGCCTCAGTCCCCAAGATTCCACCTGTATCTCAGGTTaGTCCAGCAGGAACCATCGA | + |
|
Preference number: 4 (lower is better) Translates to: KRVLGAKGSLPCLSPQDSTCISG*SSRNHR Trigger: TCGATGGTTCCTGCTGGAGCAACCTGAGATACAGGT...GGAATCTTGGGGACTGAGGCAAGGAAGGGACCCTTTAGCTCCCAAGACTCTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 |
||
| CDS-3UTR GCA 90 bp | ACAAAAGAGTCTTGGGAGCTAAAGGGTCCCTTCCTTGCCTCAGTCCCCAAGATTAGGTCCAGCTGCTGTTaGAGATGGAGTTTAGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: TKESWELKGPFLASVPKIRSSCC*RWSLGS Trigger: GCTGCCTAAACTCCATCTGCAACAGCAGCTGGACCT...AATCTTGGGGACTGAGGCAAGGAAGGGACCCTTTAGCTCCCAAGACTCTTTTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 |
||
| CDS-3UTR CCA 90 bp | AACACCAAGGCCAGTCTAAGCTTGGGAGACCAACACTTGTCTCTCCTTTTCCCACAATCTTCCCCTCTGTaGCCTCCTTCACCCATTGGT | + |
|
Preference number: 4 (lower is better) Translates to: NTKASLSLGDQHLSLLFPQSSPL*PPSPIG Trigger: ACCAATGGGTGAAGGAGGCCACAGAGGGGAAGATTG...TGGGAAAAGGAGAGACAAGTGTTGGTCTCCCAAGCTTAGACTGGCCTTGGTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 |
||
| CDS-3UTR CCA 90 bp | ACAAAAGAGTCTTGGGAGCTAAAGGGTCCCTTCCTTGCCTCAGTCCCCAAGATTGGCTCGGGTCAAACTTaGTCCTCCAGAAACCGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: TKESWELKGPFLASVPKIGSGQT*SSRNRE Trigger: TTCACGGTTTCTGGAGGACCAAGTTTGACCCGAGCC...AATCTTGGGGACTGAGGCAAGGAAGGGACCCTTTAGCTCCCAAGACTCTTTTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 |
||
| CDS-3UTR CCA 90 bp | AGAAGGAGGAAGACTCCTGGCAGTGTTGGCATCTCCAAATACCAGAGGGGTGACTGGAAGAAATCTTTCTaGGTGAGGCTCGGGTCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: RRRKTPGSVGISKYQRGDWKKSF*VRLGSN Trigger: GTTTGACCCGAGCCTCACCCAGAAAGATTTCTTCCA...GTCACCCCTCTGGTATTTGGAGATGCCAACACTGCCAGGAGTCTTCCTCCTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 |
||
| CDS-3UTR CCA 90 bp | AGAAGGAGGAAGACTCCTGGCAGTGTTGGCATCTCCAAATACCAGAGGGGTGACAACCGCTCATCCAGGTaGAAGAAATCTTTCTGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: RRRKTPGSVGISKYQRGDNRSSR*KKSFWV Trigger: CACCCAGAAAGATTTCTTCCACCTGGATGAGCGGTT...GTCACCCCTCTGGTATTTGGAGATGCCAACACTGCCAGGAGTCTTCCTCCTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 |
||
| CDS-3UTR CCA 90 bp | GTCCTTCCGGTCCCACCCTATCCCACAAAGCTGGTTAGAAAGAGTCACAGGAGCAAGGTCTTGCCTCCATaGAAGTCAGCTTTGTCATTC | + |
|
Preference number: 4 (lower is better) Translates to: VLPVPPYPTKLVRKSHRSKVLPP*KSALSF Trigger: GAATGACAAAGCTGACTTCCATGGAGGCAAGACCTT...GCTCCTGTGACTCTTTCTAACCAGCTTTGTGGGATAGGGTGGGACCGGAAGGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 |
||
| 3UTR CAA 72 bp | AACACCAAGGCCAGTCTAAGCTTGGGAGACCAACACTaGTCTCTCCTTTTCCCACCCAGGGTGTCTGGAATA | + |
|
Preference number: 4 (lower is better) Translates to: NTKASLSLGDQH*SLLFPPRVSGI Trigger: TATTCCAGACACCCTGGGTGGGAAAAGGAGAGACAAGTGTTGGTCTCCCAAGCTTAGACTGGCCTTGGTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 |
||
| 3UTR CAA 72 bp | ATCCTTTCTGCAGGTATATTCTGGCAGCCAGTCGGATaGTCCCTGGGCCTAGGTTCTGGTAGAAATGGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: ILSAGIFWQPVG*SLGLGSGRNGS Trigger: TGAGCCATTTCTACCAGAACCTAGGCCCAGGGACAATCCGACTGGCTGCCAGAATATACCTGCAGAAAGGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142094.2 |
||
| CDS-3UTR GCA 90 bp | AGAGAGAAGAAGGAGGAAGACTCCTGGCAGTGTTGGCATCTCCAAATACCAGAGGGTAGTCTTCCTCCATaGGGGGTGCAAGTTTCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: REKKEEDSWQCWHLQIPEGSLPP*GVQVSS Trigger: ACTTGAAACTTGCACCCCGCATGGAGGAAGACTACC...CTCTGGTATTTGGAGATGCCAACACTGCCAGGAGTCTTCCTCCTTCTTCTCTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 |
||
| CDS-3UTR CCA 90 bp | GGTGACAGGACACAGGTTGGGGACCTGAATGTCTTCAGCAAGGGACACTCTTGTTGGTCACCAAAATCCTaGTTGTCCAACTTGAAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: GDRTQVGDLNVFSKGHSCWSPKS*LSNLKR Trigger: CCTCTTCAAGTTGGACAACCAGGATTTTGGTGACCA...ACAAGAGTGTCCCTTGCTGAAGACATTCAGGTCCCCAACCTGTGTCCTGTCACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 |
||
| CDS-3UTR CCA 90 bp | AGAGAGAAGAAGGAGGAAGACTCCTGGCAGTGTTGGCATCTCCAAATACCAGAGTCTGCAGGTATATTCTaGCAGCCAGTCGGATTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: REKKEEDSWQCWHLQIPESAGIF*QPVGLS Trigger: GGACAATCCGACTGGCTGCCAGAATATACCTGCAGA...CTCTGGTATTTGGAGATGCCAACACTGCCAGGAGTCTTCCTCCTTCTTCTCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 |
||
| CDS-3UTR CCA 90 bp | CTACCTCTAGCCAAAACTGTGTCCACAAGTGCCAGCCCACAAAAGATCACCCCCAAGGTCTTGCCTCCATaGAAGTCAGCTTTGTCATTC | + |
|
Preference number: 4 (lower is better) Translates to: LPLAKTVSTSASPQKITPKVLPP*KSALSF Trigger: GAATGACAAAGCTGACTTCCATGGAGGCAAGACCTT...GGGGGTGATCTTTTGTGGGCTGGCACTTGTGGACACAGTTTTGGCTAGAGGTAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 |
||
| 3UTR CAA 72 bp | CCAACCATGAAGTATAACACCAAGGCCAGTCTAAGCTaGGGAGACCAACACTTGTCTCTCCTTTTCCCACCC | + |
|
Preference number: 4 (lower is better) Translates to: PTMKYNTKASLS*GDQHLSLLFPP Trigger: GGGTGGGAAAAGGAGAGACAAGTGTTGGTCTCCCAAGCTTAGACTGGCCTTGGTGTTATACTTCATGGTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 |
||
| CDS-3UTR TCA 90 bp | AAAAGAGTCTTGGGAGCTAAAGGGTCCCTTCCTTGCCTCAGTCCCCAAGATTCCCCAGGAAATCGTCTTTaGTGGGAAATCCTTTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: KRVLGAKGSLPCLSPQDSPGNRL*WEILSA Trigger: TGCAGAAAGGATTTCCCATCAAAGACGATTTCCTGG...GGAATCTTGGGGACTGAGGCAAGGAAGGGACCCTTTAGCTCCCAAGACTCTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 |
||
| CDS-3UTR TCA 90 bp | ACACAGGTTGGGGACCTGAATGTCTTCAGCAAGGGACACTCTTGTAGGGTAGGTTTCTTAAAGGGGAAATaGGCCACCTGTATCTCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: TQVGDLNVFSKGHSCRVGFLKGK*ATCISG Trigger: ACCTGAGATACAGGTGGCTCATTTCCCCTTTAAGAA...ACCTACCCTACAAGAGTGTCCCTTGCTGAAGACATTCAGGTCCCCAACCTGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 |
||
| CDS-3UTR GCA 90 bp | TCTAAAGATGGCCTCTCCAGCCTCTGCTTACAAATGTGGAGGGACCCTAAGTTAACCTGTATCTCAGGTTaGTCCAGCAGGAACCATCGA | + |
|
Preference number: 4 (lower is better) Translates to: SKDGLSSLCLQMWRDPKLTCISG*SSRNHR Trigger: TCGATGGTTCCTGCTGGAGCAACCTGAGATACAGGT...TAACTTAGGGTCCCTCCACATTTGTAAGCAGAGGCTGGAGAGGCCATCTTTAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 |
||
| CDS-3UTR CCA 90 bp | CAACACTTGTCTCTCCTTTTCCCACCCAGGGTGTCTGGAATATGTCTAAAGATGCAATCTTCCCCTCTGTaGCCTCCTTCACCCATTGGT | + |
|
Preference number: 4 (lower is better) Translates to: QHLSLLFPPRVSGICLKMQSSPL*PPSPIG Trigger: ACCAATGGGTGAAGGAGGCCACAGAGGGGAAGATTG...CATCTTTAGACATATTCCAGACACCCTGGGTGGGAAAAGGAGAGACAAGTGTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 |
||
| CDS-3UTR CCA 90 bp | CTTGTCTCTCCTTTTCCCACCCAGGGTGTCTGGAATATGTCTAAAGATGGCCTCTGGAAGAAATCTTTCTaGGTGAGGCTCGGGTCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: LVSPFPTQGVWNMSKDGLWKKSF*VRLGSN Trigger: GTTTGACCCGAGCCTCACCCAGAAAGATTTCTTCCA...GAGGCCATCTTTAGACATATTCCAGACACCCTGGGTGGGAAAAGGAGAGACAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 |
||
| 3UTR CAA 72 bp | CAGTTTCACGGGCTTCGCACCAAAGAGCCTTTCCGATaGCTCCAGGAAATCGTCTTTGATGGGAAATCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: QFHGLRTKEPFR*LQEIVFDGKSF Trigger: AAAGGATTTCCCATCAAAGACGATTTCCTGGAGCAATCGGAAAGGCTCTTTGGTGCGAAGCCCGTGAAACTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142094.2 |
||
| CDS-3UTR TCA 90 bp | CTTGTCTCTCCTTTTCCCACCCAGGGTGTCTGGAATATGTCTAAAGATGGCCTCTTCTTAAAGGGGAAATaGGCCACCTGTATCTCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: LVSPFPTQGVWNMSKDGLFLKGK*ATCISG Trigger: ACCTGAGATACAGGTGGCTCATTTCCCCTTTAAGAA...GAGGCCATCTTTAGACATATTCCAGACACCCTGGGTGGGAAAAGGAGAGACAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 |
||
| CDS-3UTR GCA 90 bp | AACACCAAGGCCAGTCTAAGCTTGGGAGACCAACACTTGTCTCTCCTTTTCCCAATGGGAAATCCTTTCTaGAGGTATATTCTGGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: NTKASLSLGDQHLSLLFPMGNPF*RYILAA Trigger: GGCTGCCAGAATATACCTGCAGAAAGGATTTCCCAT...TGGGAAAAGGAGAGACAAGTGTTGGTCTCCCAAGCTTAGACTGGCCTTGGTGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 |
||
| CDS-3UTR GCA 90 bp | CAACACTTGTCTCTCCTTTTCCCACCCAGGGTGTCTGGAATATGTCTAAAGATGGGTAGTCTTCCTCCATaGGGGGTGCAAGTTTCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: QHLSLLFPPRVSGICLKMGSLPP*GVQVSS Trigger: ACTTGAAACTTGCACCCCGCATGGAGGAAGACTACC...CATCTTTAGACATATTCCAGACACCCTGGGTGGGAAAAGGAGAGACAAGTGTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 |
||
| CDS-3UTR CCA 90 bp | AGAGAGAAGAAGGAGGAAGACTCCTGGCAGTGTTGGCATCTCCAAATACCAGAGTGGTCACCAAAATCCTaGTTGTCCAACTTGAAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: REKKEEDSWQCWHLQIPEWSPKS*LSNLKR Trigger: CCTCTTCAAGTTGGACAACCAGGATTTTGGTGACCA...CTCTGGTATTTGGAGATGCCAACACTGCCAGGAGTCTTCCTCCTTCTTCTCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 |
||
| CDS-3UTR GCA 90 bp | TCTAAAGATGGCCTCTCCAGCCTCTGCTTACAAATGTGGAGGGACCCTAAGTTAATGGGAAATCCTTTCTaGAGGTATATTCTGGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: SKDGLSSLCLQMWRDPKLMGNPF*RYILAA Trigger: GGCTGCCAGAATATACCTGCAGAAAGGATTTCCCAT...TAACTTAGGGTCCCTCCACATTTGTAAGCAGAGGCTGGAGAGGCCATCTTTAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 |
||
| 3UTR CAA 72 bp | CCAAAGAGCCTTTCCGATTGCTCCAGGAAATCGTCTTaGATGGGAAATCCTTTCTGCAGGTATATTCTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: PKSLSDCSRKSS*MGNPFCRYILA Trigger: TGCCAGAATATACCTGCAGAAAGGATTTCCCATCAAAGACGATTTCCTGGAGCAATCGGAAAGGCTCTTTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142094.2 |
||
| CDS CCA 90 bp | GCAGGCAGGGGCAGCTTCTGCTGGGCCTGCTCACTCACTGGCTGCTaGCCCGGGAGATCCACGGCGCTCACCGGAGAGAACGTGAAACAG | + |
|
Preference number: 5 (lower is better) Translates to: AGRGSFCWACSLTGC*PGRSTALTGENVKQ Trigger: CTGTTTCACGTTCTCTCCGGTGAGCGCCGTGGATCTCCCGGGCCAGCAGCCAGTGAGTGAGCAGGCCCAGCAGAAGCTGCCCCTGCCTGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 ENSMUST00000128330.8 ENSMUST00000142094.2 |
||
| CDS GCA 90 bp | TTGTCCAACTTGAAGAGGGCAGGCAGGGGCAGCTTCTGCTGGGCCTaGTCACTCACTGGCTGCTGGCCCGGGAGATCCACGGCGCTCACC | + |
|
Preference number: 5 (lower is better) Translates to: LSNLKRAGRGSFCWA*SLTGCWPGRSTALT Trigger: GGTGAGCGCCGTGGATCTCCCGGGCCAGCAGCCAGTGAGTGAGCAGGCCCAGCAGAAGCTGCCCCTGCCTGCCCTCTTCAAGTTGGACAA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 ENSMUST00000128330.8 ENSMUST00000142094.2 |
||
| CDS CCA 90 bp | TCCTGGTTGTCCAACTTGAAGAGGGCAGGCAGGGGCAGCTTCTGCTaGGCCTGCTCACTCACTGGCTGCTGGCCCGGGAGATCCACGGCG | + |
|
Preference number: 5 (lower is better) Translates to: SWLSNLKRAGRGSFC*ACSLTGCWPGRSTA Trigger: CGCCGTGGATCTCCCGGGCCAGCAGCCAGTGAGTGAGCAGGCCCAGCAGAAGCTGCCCCTGCCTGCCCTCTTCAAGTTGGACAACCAGGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 ENSMUST00000128330.8 |
||
| CDS CCA 90 bp | ACCTGGTTGTCCAACTTGAAGAGGGCAGGCAGGGGCAGCTTCTGCTaGGCCTGCTCACTCACTGGCTGCTGGCCCGGGAGATCCACGGCG | + |
|
Preference number: 5 (lower is better) Translates to: TWLSNLKRAGRGSFC*ACSLTGCWPGRSTA Trigger: CGCCGTGGATCTCCCGGGCCAGCAGCCAGTGAGTGAGCAGGCCCAGCAGAAGCTGCCCCTGCCTGCCCTCTTCAAGTTGGACAACCAGGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142094.2 |
||
| CDS GCA 90 bp | AAATCCTGGTTGTCCAACTTGAAGAGGGCAGGCAGGGGCAGCTTCTaGTGGGCCTGCTCACTCACTGGCTGCTGGCCCGGGAGATCCACG | + |
|
Preference number: 5 (lower is better) Translates to: KSWLSNLKRAGRGSF*WACSLTGCWPGRST Trigger: CGTGGATCTCCCGGGCCAGCAGCCAGTGAGTGAGCAGGCCCAGCAGAAGCTGCCCCTGCCTGCCCTCTTCAAGTTGGACAACCAGGATTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 ENSMUST00000128330.8 |
||
| CDS CCA 90 bp | CACGCTAGACACCACCAGATTCTGCTCAGAGATCCCACGAAGGTCTaGGCCCTGGAACAATTCCTGCAGGCCCAGTTGGCTGAGGGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: HARHHQILLRDPTKV*ALEQFLQAQLAEGG Trigger: GCCACCCTCAGCCAACTGGGCCTGCAGGAATTGTTCCAGGGCCCAGACCTTCGTGGGATCTCTGAGCAGAATCTGGTGGTGTCTAGCGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 |
||
| CDS TCA 90 bp | GCTGCGGCTGCCTCCACACCAGCCTCGCTGAGCTCCATGGTAGACTaGTGTTGCACGCTAGACACCACCAGATTCTGCTCAGAGATCCCA | + |
|
Preference number: 5 (lower is better) Translates to: AAAASTPASLSSMVD*CCTLDTTRFCSEIP Trigger: TGGGATCTCTGAGCAGAATCTGGTGGTGTCTAGCGTGCAACATCAGTCTACCATGGAGCTCAGCGAGGCTGGTGTGGAGGCAGCCGCAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 |
||
| CDS GCA 90 bp | GGAGGAGAGGGACATTCGATTCATGGCTACGCTGGTAGCTGCGGCTaGCTCCACACCAGCCTCGCTGAGCTCCATGGTAGACTGATGTTG | + |
|
Preference number: 5 (lower is better) Translates to: GGEGHSIHGYAGSCG*LHTSLAELHGRLML Trigger: CAACATCAGTCTACCATGGAGCTCAGCGAGGCTGGTGTGGAGGCAGCCGCAGCTACCAGCGTAGCCATGAATCGAATGTCCCTCTCCTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 |
||
| CDS GCA 90 bp | AGTGAAGGAGGAGAGGGACATTCGATTCATGGCTACGCTGGTAGCTaGGGCTGCCTCCACACCAGCCTCGCTGAGCTCCATGGTAGACTG | + |
|
Preference number: 5 (lower is better) Translates to: SEGGEGHSIHGYAGS*GCLHTSLAELHGRL Trigger: CAGTCTACCATGGAGCTCAGCGAGGCTGGTGTGGAGGCAGCCGCAGCTACCAGCGTAGCCATGAATCGAATGTCCCTCTCCTCCTTCACT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 |
||
| CDS-3UTR CAA 90 bp | GTCCTTCCGGTCCCACCCTATCCCACAAAGCTGGTTAGAAAGAGTCACAGGAGCTTAGGCAGCCACACCTaGGTGGGCCTCTCCTGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: VLPVPPYPTKLVRKSHRSLGSHT*VGLSCS Trigger: GCTGCAGGAGAGGCCCACCAAGGTGTGGCTGCCTAA...GCTCCTGTGACTCTTTCTAACCAGCTTTGTGGGATAGGGTGGGACCGGAAGGAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 |
||
| CDS-3UTR CAA 90 bp | CCAGTCGGATTGTCCCTGGGCCTAGGTTCTGGTAGAAATGGCTCAGTAGATGCGCGTGAAACAGGGACCTaGCAGGCAGGACAAGCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: PVGLSLGLGSGRNGSVDARETGT*QAGQAE Trigger: CTCAGCTTGTCCTGCCTGCAAGGTCCCTGTTTCACG...CGCATCTACTGAGCCATTTCTACCAGAACCTAGGCCCAGGGACAATCCGACTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142094.2 |
||
| CDS-3UTR CAA 90 bp | AGACTCCTGGCAGTGTTGGCATCTCCAAATACCAGAGGGGTGACTTGGGTGACATCCTGGTTGTCCAACTaGAAGAGGGCAGGCAGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: RLLAVLASPNTRGVTWVTSWLSN*KRAGRG Trigger: GCCCCTGCCTGCCCTCTTCAAGTTGGACAACCAGGA...TGTCACCCAAGTCACCCCTCTGGTATTTGGAGATGCCAACACTGCCAGGAGTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 |
||
| CDS-3UTR CAA 90 bp | GTCCTTCCGGTCCCACCCTATCCCACAAAGCTGGTTAGAAAGAGTCACAGGAGCGGCCTCCTTCACCCATaGGTTGATGTTCGCCAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: VLPVPPYPTKLVRKSHRSGLLHP*VDVRQV Trigger: GACCTGGCGAACATCAACCAATGGGTGAAGGAGGCC...GCTCCTGTGACTCTTTCTAACCAGCTTTGTGGGATAGGGTGGGACCGGAAGGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 |
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| CDS GCA 90 bp | TCAGGTTGCTCCAGCAGGAACCATCGAAGAGGATATGACACCGCGTaGATCATGTCCACCGACACTGTGAACCGCTCATCCAGGTGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: SGCSSRNHRRGYDTA*IMSTDTVNRSSRWK Trigger: CTTCCACCTGGATGAGCGGTTCACAGTGTCGGTGGACATGATGCACGCGGTGTCATATCCTCTTCGATGGTTCCTGCTGGAGCAACCTGA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 |
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| CDS CCA 90 bp | ACCGCGTGCATCATGTCCACCGACACTGTGAACCGCTCATCCAGGTaGAAGAAATCTTTCTGGGTGAGGCTCGGGTCAAACTTGGTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: TACIMSTDTVNRSSR*KKSFWVRLGSNLVL Trigger: GAGGACCAAGTTTGACCCGAGCCTCACCCAGAAAGATTTCTTCCACCTGGATGAGCGGTTCACAGTGTCGGTGGACATGATGCACGCGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 ENSMUST00000128330.8 |
||
| CDS-3UTR CAA 90 bp | GGTGACAGGACACAGGTTGGGGACCTGAATGTCTTCAGCAAGGGACACTCTTGTCGTGAAACAGGGACCTaGCAGGCAGGACAAGCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: GDRTQVGDLNVFSKGHSCRETGT*QAGQAE Trigger: CTCAGCTTGTCCTGCCTGCAAGGTCCCTGTTTCACG...ACAAGAGTGTCCCTTGCTGAAGACATTCAGGTCCCCAACCTGTGTCCTGTCACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 |
||
| CDS-3UTR CAA 90 bp | AAAAGAGTCTTGGGAGCTAAAGGGTCCCTTCCTTGCCTCAGTCCCCAAGATTCCTCCTGGTTGTCCAACTaGAAGAGGGCAGGCAGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: KRVLGAKGSLPCLSPQDSSWLSN*KRAGRG Trigger: GCCCCTGCCTGCCCTCTTCAAGTTGGACAACCAGGA...GGAATCTTGGGGACTGAGGCAAGGAAGGGACCCTTTAGCTCCCAAGACTCTTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 |
||
| CDS-3UTR CAA 90 bp | GTCCTTCCGGTCCCACCCTATCCCACAAAGCTGGTTAGAAAGAGTCACAGGAGCGAGTCTCCTCTGCAGTaGGGACACTCTTGCAGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: VLPVPPYPTKLVRKSHRSESPLQ*GHSCSV Trigger: GACACTGCAAGAGTGTCCCAACTGCAGAGGAGACTC...GCTCCTGTGACTCTTTCTAACCAGCTTTGTGGGATAGGGTGGGACCGGAAGGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 |
||
| CDS-3UTR CAA 90 bp | TCTTGGGAGCTAAAGGGTCCCTTCCTTGCCTCAGTCCCCAAGATTCCTGGCAGGGGAGCTGGTAGATGTTaGGGCCACCAAAGAGAACAG | + |
|
Preference number: 5 (lower is better) Translates to: SWELKGPFLASVPKIPGRGAGRC*GHQREQ Trigger: CTGTTCTCTTTGGTGGCCCAAACATCTACCAGCTCC...CCTGCCAGGAATCTTGGGGACTGAGGCAAGGAAGGGACCCTTTAGCTCCCAAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 |
||
| CDS-3UTR CAA 90 bp | CTACCTCTAGCCAAAACTGTGTCCACAAGTGCCAGCCCACAAAAGATCACCCCCGGCCTCCTTCACCCATaGGTTGATGTTCGCCAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: LPLAKTVSTSASPQKITPGLLHP*VDVRQV Trigger: GACCTGGCGAACATCAACCAATGGGTGAAGGAGGCC...GGGGGTGATCTTTTGTGGGCTGGCACTTGTGGACACAGTTTTGGCTAGAGGTAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 |
||
| CDS-3UTR CAA 90 bp | ATCTCCAAATACCAGAGGGGTGACTTGGGTGACAGGACACAGGTTGGGGACCTGCACCTGTATCTCAGGTaGCTCCAGCAGGAACCATCG | + |
|
Preference number: 5 (lower is better) Translates to: ISKYQRGDLGDRTQVGDLHLYLR*LQQEPS Trigger: CGATGGTTCCTGCTGGAGCAACCTGAGATACAGGTG...CAGGTCCCCAACCTGTGTCCTGTCACCCAAGTCACCCCTCTGGTATTTGGAGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 |
||
| CDS-3UTR CAA 90 bp | CTCCTGGCAGTGTTGGCATCTCCAAATACCAGAGGGGTGACTTGGGTGACAGGACAGGTCCAGCTGCTGTaGCAGATGGAGTTTAGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: LLAVLASPNTRGVTWVTGQVQLL*QMEFRQ Trigger: CTGCCTAAACTCCATCTGCAACAGCAGCTGGACCTG...TCCTGTCACCCAAGTCACCCCTCTGGTATTTGGAGATGCCAACACTGCCAGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 |
||
| CDS CCA 90 bp | GCCTCTCCTGCAGCGAGGGATGGTACAGAGTATCCCAGGTCAGGTTaGCTAGTACCTCGGACACGTTCCACTCAAAATAAGTGGGCATCA | + |
|
Preference number: 5 (lower is better) Translates to: ASPAARDGTEYPRSG*LVPRTRSTQNKWAS Trigger: TGATGCCCACTTATTTTGAGTGGAACGTGTCCGAGGTACTAGCCAACCTGACCTGGGATACTCTGTACCATCCCTCGCTGCAGGAGAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 |
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| CDS-3UTR CAA 90 bp | TGGTTAGAAAGAGTCACAGGAGCTGAGAGGCTGATCCAGGTGGGGACTCAGGATGAGTCTCCTCTGCAGTaGGGACACTCTTGCAGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: WLERVTGAERLIQVGTQDESPLQ*GHSCSV Trigger: GACACTGCAAGAGTGTCCCAACTGCAGAGGAGACTC...ATCCTGAGTCCCCACCTGGATCAGCCTCTCAGCTCCTGTGACTCTTTCTAACCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 |
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| CDS-3UTR CAA 90 bp | TCTAAAGATGGCCTCTCCAGCCTCTGCTTACAAATGTGGAGGGACCCTAAGTTATTAGGCAGCCACACCTaGGTGGGCCTCTCCTGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: SKDGLSSLCLQMWRDPKLLGSHT*VGLSCS Trigger: GCTGCAGGAGAGGCCCACCAAGGTGTGGCTGCCTAA...TAACTTAGGGTCCCTCCACATTTGTAAGCAGAGGCTGGAGAGGCCATCTTTAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 |
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| CDS-3UTR CAA 90 bp | AAGACTCCTGGCAGTGTTGGCATCTCCAAATACCAGAGGGGTGACTTGGGTGACCAGGTCCAGCTGCTGTaGCAGATGGAGTTTAGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: KTPGSVGISKYQRGDLGDQVQLL*QMEFRQ Trigger: CTGCCTAAACTCCATCTGCAACAGCAGCTGGACCTG...GTCACCCAAGTCACCCCTCTGGTATTTGGAGATGCCAACACTGCCAGGAGTCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 |
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| CDS-3UTR CAA 90 bp | AGAAGGAGGAAGACTCCTGGCAGTGTTGGCATCTCCAAATACCAGAGGGGTGACTGGCCTATGAGCCTGTaGTCAGGGGAATCTCGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: RRRKTPGSVGISKYQRGDWPMSL*SGESRC Trigger: ACAGCGAGATTCCCCTGACAACAGGCTCATAGGCCA...GTCACCCCTCTGGTATTTGGAGATGCCAACACTGCCAGGAGTCTTCCTCCTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 |
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| CDS-3UTR CAA 90 bp | AGGCAGGATCCTGTGTTCATGTGCAACACTCGATGCAAGCTGTGTAGTGTTTGGACCTGGTTGTCCAACTaGAAGAGGGCAGGCAGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: RQDPVFMCNTRCKLCSVWTWLSN*KRAGRG Trigger: GCCCCTGCCTGCCCTCTTCAAGTTGGACAACCAGGT...CCAAACACTACACAGCTTGCATCGAGTGTTGCACATGAACACAGGATCCTGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142094.2 |
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| CDS-3UTR CAA 90 bp | CTTGTCTCTCCTTTTCCCACCCAGGGTGTCTGGAATATGTCTAAAGATGGCCTCCGTGAAACAGGGACCTaGCAGGCAGGACAAGCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: LVSPFPTQGVWNMSKDGLRETGT*QAGQAE Trigger: CTCAGCTTGTCCTGCCTGCAAGGTCCCTGTTTCACG...GAGGCCATCTTTAGACATATTCCAGACACCCTGGGTGGGAAAAGGAGAGACAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 |
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| CDS-3UTR CAA 90 bp | AGGGACTTGCCTAACCTACCTCTAGCCAAAACTGTGTCCACAAGTGCCAGCCCAGGAGCTGGTAGATGTTaGGGCCACCAAAGAGAACAG | + |
|
Preference number: 5 (lower is better) Translates to: RDLPNLPLAKTVSTSASPGAGRC*GHQREQ Trigger: CTGTTCTCTTTGGTGGCCCAAACATCTACCAGCTCC...TGGGCTGGCACTTGTGGACACAGTTTTGGCTAGAGGTAGGTTAGGCAAGTCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 |
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| CDS-3UTR CAA 90 bp | AGAAGGAGGAAGACTCCTGGCAGTGTTGGCATCTCCAAATACCAGAGGGGTGACGGTGACAGGACAAGGTaGGAGCTGGTAGATGTTTGG | + |
|
Preference number: 5 (lower is better) Translates to: RRRKTPGSVGISKYQRGDGDRTR*ELVDVW Trigger: CCAAACATCTACCAGCTCCAACCTTGTCCTGTCACC...GTCACCCCTCTGGTATTTGGAGATGCCAACACTGCCAGGAGTCTTCCTCCTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 |
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| CDS-3UTR CAA 90 bp | AAGACTCCTGGCAGTGTTGGCATCTCCAAATACCAGAGGGGTGACTTGGGTGACGGTGACAGGACAAGGTaGGAGCTGGTAGATGTTTGG | + |
|
Preference number: 5 (lower is better) Translates to: KTPGSVGISKYQRGDLGDGDRTR*ELVDVW Trigger: CCAAACATCTACCAGCTCCAACCTTGTCCTGTCACC...GTCACCCAAGTCACCCCTCTGGTATTTGGAGATGCCAACACTGCCAGGAGTCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 |
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| CDS-3UTR CAA 90 bp | AAAGAGTCTTGGGAGCTAAAGGGTCCCTTCCTTGCCTCAGTCCCCAAGATTCCTCACCTGTATCTCAGGTaGCTCCAGCAGGAACCATCG | + |
|
Preference number: 5 (lower is better) Translates to: KESWELKGPFLASVPKIPHLYLR*LQQEPS Trigger: CGATGGTTCCTGCTGGAGCAACCTGAGATACAGGTG...AGGAATCTTGGGGACTGAGGCAAGGAAGGGACCCTTTAGCTCCCAAGACTCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 |
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| CDS-3UTR CAA 90 bp | AGGGACTTGCCTAACCTACCTCTAGCCAAAACTGTGTCCACAAGTGCCAGCCCACATGGTAGACTGATGTaGCACGCTAGACACCACCAG | + |
|
Preference number: 5 (lower is better) Translates to: RDLPNLPLAKTVSTSASPHGRLM*HARHHQ Trigger: CTGGTGGTGTCTAGCGTGCAACATCAGTCTACCATG...TGGGCTGGCACTTGTGGACACAGTTTTGGCTAGAGGTAGGTTAGGCAAGTCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 |
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| CDS-3UTR CAA 90 bp | GGCAGTGTTGGCATCTCCAAATACCAGAGGGGTGACTTGGGTGACAGGACACAGTCACCAAAATCCTGGTaGTCCAACTTGAAGAGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: GSVGISKYQRGDLGDRTQSPKSW*SNLKRA Trigger: TGCCCTCTTCAAGTTGGACAACCAGGATTTTGGTGA...CTGTGTCCTGTCACCCAAGTCACCCCTCTGGTATTTGGAGATGCCAACACTGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 |
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| CDS-3UTR CAA 90 bp | GAGAGAGAAGAAGGAGGAAGACTCCTGGCAGTGTTGGCATCTCCAAATACCAGATGGCCTATGAGCCTGTaGTCAGGGGAATCTCGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: EREEGGRLLAVLASPNTRWPMSL*SGESRC Trigger: ACAGCGAGATTCCCCTGACAACAGGCTCATAGGCCA...TCTGGTATTTGGAGATGCCAACACTGCCAGGAGTCTTCCTCCTTCTTCTCTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 |
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| CDS-3UTR CAA 90 bp | CTACCTCTAGCCAAAACTGTGTCCACAAGTGCCAGCCCACAAAAGATCACCCCCTCACCAAAATCCTGGTaGTCCAACTTGAAGAGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: LPLAKTVSTSASPQKITPSPKSW*SNLKRA Trigger: TGCCCTCTTCAAGTTGGACAACCAGGATTTTGGTGA...GGGGGTGATCTTTTGTGGGCTGGCACTTGTGGACACAGTTTTGGCTAGAGGTAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 |
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| CDS-3UTR CAA 90 bp | AACACCAAGGCCAGTCTAAGCTTGGGAGACCAACACTTGTCTCTCCTTTTCCCATCCTTCACCCATTGGTaGATGTTCGCCAGGTCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: NTKASLSLGDQHLSLLFPSFTHW*MFARSS Trigger: GGAAGACCTGGCGAACATCAACCAATGGGTGAAGGA...TGGGAAAAGGAGAGACAAGTGTTGGTCTCCCAAGCTTAGACTGGCCTTGGTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 |
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| CDS-3UTR CAA 90 bp | TACAAAAGAGTCTTGGGAGCTAAAGGGTCCCTTCCTTGCCTCAGTCCCCAAGATTCCTTCACCCATTGGTaGATGTTCGCCAGGTCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: YKRVLGAKGSLPCLSPQDSFTHW*MFARSS Trigger: GGAAGACCTGGCGAACATCAACCAATGGGTGAAGGA...ATCTTGGGGACTGAGGCAAGGAAGGGACCCTTTAGCTCCCAAGACTCTTTTGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 |
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| CDS TCA 90 bp | GTGGGCATCACGACCACAAAGCTCATGTTGTTCTTAAAGGGGAAATaGGCCACCTGTATCTCAGGTTGCTCCAGCAGGAACCATCGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: VGITTTKLMLFLKGK*ATCISGCSSRNHRR Trigger: TCTTCGATGGTTCCTGCTGGAGCAACCTGAGATACAGGTGGCTCATTTCCCCTTTAAGAACAACATGAGCTTTGTGGTCGTGATGCCCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 |
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| CDS-3UTR CAA 90 bp | TCTAAAGATGGCCTCTCCAGCCTCTGCTTACAAATGTGGAGGGACCCTAAGTTACATGGTAGACTGATGTaGCACGCTAGACACCACCAG | + |
|
Preference number: 5 (lower is better) Translates to: SKDGLSSLCLQMWRDPKLHGRLM*HARHHQ Trigger: CTGGTGGTGTCTAGCGTGCAACATCAGTCTACCATG...TAACTTAGGGTCCCTCCACATTTGTAAGCAGAGGCTGGAGAGGCCATCTTTAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 |
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| CDS-3UTR CAA 90 bp | ACAAAAGAGTCTTGGGAGCTAAAGGGTCCCTTCCTTGCCTCAGTCCCCAAGATTTCCAGGAAATCGTCTTaGATGGGAAATCCTTTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: TKESWELKGPFLASVPKISRKSS*MGNPFC Trigger: GCAGAAAGGATTTCCCATCAAAGACGATTTCCTGGA...AATCTTGGGGACTGAGGCAAGGAAGGGACCCTTTAGCTCCCAAGACTCTTTTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 |
||
| CDS-3UTR CAA 90 bp | AACACCAAGGCCAGTCTAAGCTTGGGAGACCAACACTTGTCTCTCCTTTTCCCATCCAGGAAATCGTCTTaGATGGGAAATCCTTTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: NTKASLSLGDQHLSLLFPSRKSS*MGNPFC Trigger: GCAGAAAGGATTTCCCATCAAAGACGATTTCCTGGA...TGGGAAAAGGAGAGACAAGTGTTGGTCTCCCAAGCTTAGACTGGCCTTGGTGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 |
||
| CDS-3UTR CAA 90 bp | GATTGCTCCAGGAAATCGTCTTTGATGGGAAATCCTTTCTGCAGGTATATTCTGCCTGATTGTACCTGGTaGTCCAACTTGAAGAGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: DCSRKSSLMGNPFCRYILPDCTW*SNLKRA Trigger: TGCCCTCTTCAAGTTGGACAACCAGGTACAATCAGG...CAGAATATACCTGCAGAAAGGATTTCCCATCAAAGACGATTTCCTGGAGCAATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142094.2 |
||
| CDS CCA 72 bp | AGGCAGGGGCAGCTTCTGCTGGGCCTGCTCACTCACTaGCTGCTGGCCCGGGAGATCCACGGCGCTCACCGG | + |
|
Preference number: 6 (lower is better) Translates to: RQGQLLLGLLTH*LLAREIHGAHR Trigger: CCGGTGAGCGCCGTGGATCTCCCGGGCCAGCAGCCAGTGAGTGAGCAGGCCCAGCAGAAGCTGCCCCTGCCT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 ENSMUST00000128330.8 ENSMUST00000142094.2 |
||
| CDS GCA 72 bp | AGGGGCAGCTTCTGCTGGGCCTGCTCACTCACTGGCTaGTGGCCCGGGAGATCCACGGCGCTCACCGGAGAG | + |
|
Preference number: 6 (lower is better) Translates to: RGSFCWACSLTG*WPGRSTALTGE Trigger: CTCTCCGGTGAGCGCCGTGGATCTCCCGGGCCAGCAGCCAGTGAGTGAGCAGGCCCAGCAGAAGCTGCCCCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 ENSMUST00000128330.8 ENSMUST00000142094.2 |
||
| CDS CCA 72 bp | GGCAGCTTCTGCTGGGCCTGCTCACTCACTGGCTGCTaGCCCGGGAGATCCACGGCGCTCACCGGAGAGAAC | + |
|
Preference number: 6 (lower is better) Translates to: GSFCWACSLTGC*PGRSTALTGEN Trigger: GTTCTCTCCGGTGAGCGCCGTGGATCTCCCGGGCCAGCAGCCAGTGAGTGAGCAGGCCCAGCAGAAGCTGCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 ENSMUST00000128330.8 ENSMUST00000142094.2 |
||
| CDS CAA 90 bp | CGGGAGATCCACGGCGCTCACCGGAGAGAACGTGAAACAGGGACCTaGCAGGCAGGACAAGCTGAGTACGAGGAGCCCCCGGAGCAGTGC | + |
|
Preference number: 6 (lower is better) Translates to: REIHGAHRRERETGT*QAGQAEYEEPPEQC Trigger: GCACTGCTCCGGGGGCTCCTCGTACTCAGCTTGTCCTGCCTGCAAGGTCCCTGTTTCACGTTCTCTCCGGTGAGCGCCGTGGATCTCCCG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 ENSMUST00000128330.8 ENSMUST00000142094.2 |
||
| CDS GCA 72 bp | ACGGCGCTCACCGGAGAGAACGTGAAACAGGGACCTTaGAGGCAGGACAAGCTGAGTACGAGGAGCCCCCGG | + |
|
Preference number: 6 (lower is better) Translates to: TALTGENVKQGP*RQDKLSTRSPR Trigger: CCGGGGGCTCCTCGTACTCAGCTTGTCCTGCCTGCAAGGTCCCTGTTTCACGTTCTCTCCGGTGAGCGCCGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 ENSMUST00000128330.8 ENSMUST00000142094.2 |
||
| CDS CAA 72 bp | CACGGCGCTCACCGGAGAGAACGTGAAACAGGGACCTaGCAGGCAGGACAAGCTGAGTACGAGGAGCCCCCG | + |
|
Preference number: 6 (lower is better) Translates to: HGAHRRERETGT*QAGQAEYEEPP Trigger: CGGGGGCTCCTCGTACTCAGCTTGTCCTGCCTGCAAGGTCCCTGTTTCACGTTCTCTCCGGTGAGCGCCGTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 ENSMUST00000128330.8 ENSMUST00000142094.2 |
||
| CDS GCA 72 bp | AGGCCCAGTTGGCTGAGGGTGGCCACCAGGTCCAGCTaGTGTTGCAGATGGAGTTTAGGCAGCCACACCTTG | + |
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Preference number: 6 (lower is better) Translates to: RPSWLRVATRSS*CCRWSLGSHTL Trigger: CAAGGTGTGGCTGCCTAAACTCCATCTGCAACAGCAGCTGGACCTGGTGGCCACCCTCAGCCAACTGGGCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 |
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| CDS GCA 72 bp | GGAGAGGGACATTCGATTCATGGCTACGCTGGTAGCTaGGGCTGCCTCCACACCAGCCTCGCTGAGCTCCAT | + |
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Preference number: 6 (lower is better) Translates to: GEGHSIHGYAGS*GCLHTSLAELH Trigger: ATGGAGCTCAGCGAGGCTGGTGTGGAGGCAGCCGCAGCTACCAGCGTAGCCATGAATCGAATGTCCCTCTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 |
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| CDS GCA 72 bp | GGACATTCGATTCATGGCTACGCTGGTAGCTGCGGCTaGCTCCACACCAGCCTCGCTGAGCTCCATGGTAGA | + |
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Preference number: 6 (lower is better) Translates to: GHSIHGYAGSCG*LHTSLAELHGR Trigger: TCTACCATGGAGCTCAGCGAGGCTGGTGTGGAGGCAGCCGCAGCTACCAGCGTAGCCATGAATCGAATGTCC 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 |
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| CDS CCA 72 bp | AGCCACACCTTGGTGGGCCTCTCCTGCAGCGAGGGATaGTACAGAGTATCCCAGGTCAGGTTGGCTAGTACC | + |
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Preference number: 6 (lower is better) Translates to: SHTLVGLSCSEG*YRVSQVRLAST Trigger: GGTACTAGCCAACCTGACCTGGGATACTCTGTACCATCCCTCGCTGCAGGAGAGGCCCACCAAGGTGTGGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 |
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| CDS CAA 90 bp | GGCTGCCTCCACACCAGCCTCGCTGAGCTCCATGGTAGACTGATGTaGCACGCTAGACACCACCAGATTCTGCTCAGAGATCCCACGAAG | + |
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Preference number: 6 (lower is better) Translates to: GCLHTSLAELHGRLM*HARHHQILLRDPTK Trigger: CTTCGTGGGATCTCTGAGCAGAATCTGGTGGTGTCTAGCGTGCAACATCAGTCTACCATGGAGCTCAGCGAGGCTGGTGTGGAGGCAGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 |
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| CDS CCA 72 bp | AGATTCTGCTCAGAGATCCCACGAAGGTCTGGGCCCTaGAACAATTCCTGCAGGCCCAGTTGGCTGAGGGTG | + |
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Preference number: 6 (lower is better) Translates to: RFCSEIPRRSGP*NNSCRPSWLRV Trigger: CACCCTCAGCCAACTGGGCCTGCAGGAATTGTTCCAGGGCCCAGACCTTCGTGGGATCTCTGAGCAGAATCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 |
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| CDS TCA 72 bp | ACTTGGTCCTCCAGAAACCGTGAAAGTGGATGGCGTTaGGGAGAAGCAGCACGGTGCTATCCGGCAGCTCAG | + |
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Preference number: 6 (lower is better) Translates to: TWSSRNRESGWR*GEAARCYPAAQ Trigger: CTGAGCTGCCGGATAGCACCGTGCTGCTTCTCCTCAACGCCATCCACTTTCACGGTTTCTGGAGGACCAAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 ENSMUST00000128330.8 |
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| CDS TCA 72 bp | GCCTCCACACCAGCCTCGCTGAGCTCCATGGTAGACTaGTGTTGCACGCTAGACACCACCAGATTCTGCTCA | + |
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Preference number: 6 (lower is better) Translates to: ASTPASLSSMVD*CCTLDTTRFCS Trigger: TGAGCAGAATCTGGTGGTGTCTAGCGTGCAACATCAGTCTACCATGGAGCTCAGCGAGGCTGGTGTGGAGGC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 |
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| CDS GCA 72 bp | GGAGCTGAACTGGGGGTAGTCTTCCTCCATGCGGGGTaGAAGTTTCAAGTCAGGACCAAAGGTCTTGCCTCC | + |
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Preference number: 6 (lower is better) Translates to: GAELGVVFLHAG*KFQVRTKGLAS Trigger: GGAGGCAAGACCTTTGGTCCTGACTTGAAACTTGCACCCCGCATGGAGGAAGACTACCCCCAGTTCAGCTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 |
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| CDS GCA 72 bp | TCCAGCAGGAACCATCGAAGAGGATATGACACCGCGTaGATCATGTCCACCGACACTGTGAACCGCTCATCC | + |
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Preference number: 6 (lower is better) Translates to: SSRNHRRGYDTA*IMSTDTVNRSS Trigger: GGATGAGCGGTTCACAGTGTCGGTGGACATGATGCACGCGGTGTCATATCCTCTTCGATGGTTCCTGCTGGA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 ENSMUST00000128330.8 |
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| CDS CAA 72 bp | GACCTCTTGAGGGTAGCATGGTCACCAAAATCCTGGTaGTCCAACTTGAAGAGGGCAGGCAGGGGCAGCTTC | + |
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Preference number: 6 (lower is better) Translates to: DLLRVAWSPKSW*SNLKRAGRGSF Trigger: GAAGCTGCCCCTGCCTGCCCTCTTCAAGTTGGACAACCAGGATTTTGGTGACCATGCTACCCTCAAGAGGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 ENSMUST00000128330.8 |
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| CDS CAA 72 bp | TGGAAGTCAGCTTTGTCATTCTGGCCTATGAGCCTGTaGTCAGGGGAATCTCGCTGTTCCTGGAGCTGGGGC | + |
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Preference number: 6 (lower is better) Translates to: WKSALSFWPMSL*SGESRCSWSWG Trigger: GCCCCAGCTCCAGGAACAGCGAGATTCCCCTGACAACAGGCTCATAGGCCAGAATGACAAAGCTGACTTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 |
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| CDS CCA 72 bp | AGTCTCCTCTGCAGTTGGGACACTCTTGCAGTGTCCTaGGGACCTCTTGAGGGTAGCATGGTCACCAAAATC | + |
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Preference number: 6 (lower is better) Translates to: SLLCSWDTLAVS*GPLEGSMVTKI Trigger: GATTTTGGTGACCATGCTACCCTCAAGAGGTCCCCAGGACACTGCAAGAGTGTCCCAACTGCAGAGGAGACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 ENSMUST00000128330.8 |
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| CDS CAA 72 bp | CACACCAGCCTCGCTGAGCTCCATGGTAGACTGATGTaGCACGCTAGACACCACCAGATTCTGCTCAGAGAT | + |
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Preference number: 6 (lower is better) Translates to: HTSLAELHGRLM*HARHHQILLRD Trigger: ATCTCTGAGCAGAATCTGGTGGTGTCTAGCGTGCAACATCAGTCTACCATGGAGCTCAGCGAGGCTGGTGTG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 |
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| CDS TCA 72 bp | GATATGACACCGCGTGCATCATGTCCACCGACACTGTaGACCGCTCATCCAGGTGGAAGAAATCTTTCTGGG | + |
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Preference number: 6 (lower is better) Translates to: DMTPRASCPPTL*TAHPGGRNLSG Trigger: CCCAGAAAGATTTCTTCCACCTGGATGAGCGGTTCACAGTGTCGGTGGACATGATGCACGCGGTGTCATATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 ENSMUST00000128330.8 |
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| CDS CCA 72 bp | ATCATGTCCACCGACACTGTGAACCGCTCATCCAGGTaGAAGAAATCTTTCTGGGTGAGGCTCGGGTCAAAC | + |
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Preference number: 6 (lower is better) Translates to: IMSTDTVNRSSR*KKSFWVRLGSN Trigger: GTTTGACCCGAGCCTCACCCAGAAAGATTTCTTCCACCTGGATGAGCGGTTCACAGTGTCGGTGGACATGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 ENSMUST00000128330.8 |
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| CDS CCA 72 bp | ACTGTGAACCGCTCATCCAGGTGGAAGAAATCTTTCTaGGTGAGGCTCGGGTCAAACTTGGTCCTCCAGAAA | + |
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Preference number: 6 (lower is better) Translates to: TVNRSSRWKKSF*VRLGSNLVLQK Trigger: TTTCTGGAGGACCAAGTTTGACCCGAGCCTCACCCAGAAAGATTTCTTCCACCTGGATGAGCGGTTCACAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 ENSMUST00000128330.8 |
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| CDS CCA 72 bp | AAGGTCTTGCCTCCATGGAAGTCAGCTTTGTCATTCTaGCCTATGAGCCTGTTGTCAGGGGAATCTCGCTGT | + |
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Preference number: 6 (lower is better) Translates to: KVLPPWKSALSF*PMSLLSGESRC Trigger: ACAGCGAGATTCCCCTGACAACAGGCTCATAGGCCAGAATGACAAAGCTGACTTCCATGGAGGCAAGACCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 |
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| CDS TCA 72 bp | ACGACCACAAAGCTCATGTTGTTCTTAAAGGGGAAATaGGCCACCTGTATCTCAGGTTGCTCCAGCAGGAAC | + |
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Preference number: 6 (lower is better) Translates to: TTTKLMLFLKGK*ATCISGCSSRN Trigger: GTTCCTGCTGGAGCAACCTGAGATACAGGTGGCTCATTTCCCCTTTAAGAACAACATGAGCTTTGTGGTCGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043696.9 ENSMUST00000108437.8 |
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