Pregenerated sensors for SERPINF1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000000753Ensembl transcript IDs: ENSMUST00000000769.14, ENSMUST00000125982.2, ENSMUST00000137103.8, ENSMUST00000138661.8, ENSMUST00000155009.2, ENSMUST00000167281.8, ENSMUST00000168902.8
Found 116 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCTGCCCCCTCTTCATTCCACTCGAAAGCAGCCCTGTGTTCCACTTaGGTGAGCTTCACGGGTTTGCCAGTAATCTTGCTGAAGTCGGGT | + |
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Preference number: 1 (lower is better) Translates to: PAPSSFHSKAALCST*VSFTGLPVILLKSG Trigger: ACCCGACTTCAGCAAGATTACTGGCAAACCCGTGAAGCTCACCCAAGTGGAACACAGGGCTGCTTTCGAGTGGAATGAAGAGGGGGCAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000167281.8 ENSMUST00000168902.8 |
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| 3UTR TCA 90 bp | GGATCTGACATCATGGGGACTCTCACGGTCCTGTCCTCGTCCAAATaGAAATCCTGGAGGGTCGTCTTTCTCGAGTCAAACTTGGTTACC | + |
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Preference number: 1 (lower is better) Translates to: GSDIMGTLTVLSSSK*KSWRVVFLESNLVT Trigger: GGTAACCAAGTTTGACTCGAGAAAGACGACCCTCCAGGATTTTCATTTGGACGAGGACAGGACCGTGAGAGTCCCCATGATGTCAGATCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168902.8 |
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| 3UTR CCA 90 bp | AGGGGCAGGAAGAAGATGATGCTCATACTTCCTGTCAAGGGCAGCTaGGCAATCTTGCAGTTGAGATCAGAGTCCAAGCCGTATCGTAAG | + |
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Preference number: 1 (lower is better) Translates to: RGRKKMMLILPVKGS*AILQLRSESKPYRK Trigger: CTTACGATACGGCTTGGACTCTGATCTCAACTGCAAGATTGCCCAGCTGCCCTTGACAGGAAGTATGAGCATCATCTTCTTCCTGCCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167281.8 ENSMUST00000168902.8 |
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| 3UTR TCA 90 bp | ACGTTCCTCTTCCTCATCCACCTGCACTCCGAGAACAGGAAATGGTaGCTTTGGCAGAGCTTAAGCAGAGCCCGTTCATGTTACAAGTAT | + |
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Preference number: 1 (lower is better) Translates to: TFLFLIHLHSENRKW*LWQSLSRARSCYKY Trigger: ATACTTGTAACATGAACGGGCTCTGCTTAAGCTCTGCCAAAGTCACCATTTCCTGTTCTCGGAGTGCAGGTGGATGAGGAAGAGGAACGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000769.14 |
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| 3UTR GCA 90 bp | TTGCTGAAGTCGGGTGATTCAAACAACGACTGTAGCTTCATGTCCTaGAGAGACTTGGTAAGTTCGCCTTCGAAGCTCAGCTTCAGCTTG | + |
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Preference number: 1 (lower is better) Translates to: LLKSGDSNNDCSFMS*RDLVSSPSKLSFSL Trigger: CAAGCTGAAGCTGAGCTTCGAAGGCGAACTTACCAAGTCTCTGCAGGACATGAAGCTACAGTCGTTGTTTGAATCACCCGACTTCAGCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000167281.8 ENSMUST00000168902.8 |
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| 3UTR GCA 90 bp | AAACAGGAGAAGGAAGAAGCAAACATTAAGGAAAAGCTCTTTTATTaGAGAGGCTACACTGAAGCTACCGGCCGCCTTCCTGGAATGTAT | + |
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Preference number: 1 (lower is better) Translates to: KQEKEEANIKEKLFY*RGYTEATGRLPGMY Trigger: ATACATTCCAGGAAGGCGGCCGGTAGCTTCAGTGTAGCCTCTGCAATAAAAGAGCTTTTCCTTAATGTTTGCTTCTTCCTTCTCCTGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000769.14 |
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| 3UTR CAA 90 bp | TCCTGCCCCCTCTTCATTCCACTCGAAAGCAGCCCTGTGTTCCACTaGGGTGAGCTTCACGGGTTTGCCAGTAATCTTGCTGAAGTCGGG | + |
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Preference number: 2 (lower is better) Translates to: SCPLFIPLESSPVFH*GELHGFASNLAEVG Trigger: CCCGACTTCAGCAAGATTACTGGCAAACCCGTGAAGCTCACCCAAGTGGAACACAGGGCTGCTTTCGAGTGGAATGAAGAGGGGGCAGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000167281.8 ENSMUST00000168902.8 |
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| 3UTR-3UTR TCA 90 bp | GGTAAGTTCGCCTTCGAAGCTCAGCTTCAGCTTGGGGACAGTCAGCACAGCTTGGATGGCCTTAGGATCTaGCATCATGGGGACTCTCAC | + |
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Preference number: 2 (lower is better) Translates to: GKFAFEAQLQLGDSQHSLDGLRI*HHGDSH Trigger: GTGAGAGTCCCCATGATGTCAGATCCTAAGGCCATC...CAAGCTGTGCTGACTGTCCCCAAGCTGAAGCTGAGCTTCGAAGGCGAACTTACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000167281.8 ENSMUST00000168902.8 |
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| 3UTR-3UTR CCA 90 bp | TGCAGAGACTTGGTAAGTTCGCCTTCGAAGCTCAGCTTCAGCTTGGGGACAGTCTGGGCATTTCCCTCGTaGACCGGGCAATCTTCCCTT | + |
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Preference number: 2 (lower is better) Translates to: CRDLVSSPSKLSFSLGTVWAFPS*TGQSSL Trigger: AAGGGAAGATTGCCCGGTCCACGAGGGAAATGCCCA...GACTGTCCCCAAGCTGAAGCTGAGCTTCGAAGGCGAACTTACCAAGTCTCTGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168902.8 |
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| 3UTR CAA 90 bp | TCCTGCAGAGACTTGGTAAGTTCGCCTTCGAAGCTCAGCTTCAGCTaGGGGACAGTCAGCACAGCTTGGATAGTCTTCAGTTCTCGGTCG | + |
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Preference number: 2 (lower is better) Translates to: SCRDLVSSPSKLSFS*GTVSTAWIVFSSRS Trigger: CGACCGAGAACTGAAGACTATCCAAGCTGTGCTGACTGTCCCCAAGCTGAAGCTGAGCTTCGAAGGCGAACTTACCAAGTCTCTGCAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167281.8 ENSMUST00000168902.8 |
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| 3UTR-3UTR TCA 90 bp | GTCCTGCAGAGACTTGGTAAGTTCGCCTTCGAAGCTCAGCTTCAGCTTGGGGACTCTCGGTCGATGTCATaGATGAACTCAGAGGTGAGG | + |
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Preference number: 2 (lower is better) Translates to: VLQRLGKFAFEAQLQLGDSRSMS*MNSEVR Trigger: CCTCACCTCTGAGTTCATTCATGACATCGACCGAGA...GTCCCCAAGCTGAAGCTGAGCTTCGAAGGCGAACTTACCAAGTCTCTGCAGGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167281.8 ENSMUST00000168902.8 |
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| 3UTR-3UTR TCA 90 bp | CTCTCTTCTATCATGGTCAAGTTCTGGGTCACGGTCAGGGGCAGGAAGAAGATGGGGCAATCTTGCAGTTaGGATCAGAGTCCAAGCCGT | + |
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Preference number: 2 (lower is better) Translates to: LSSIMVKFWVTVRGRKKMGQSCS*DQSPSR Trigger: ACGGCTTGGACTCTGATCTCAACTGCAAGATTGCCC...CATCTTCTTCCTGCCCCTGACCGTGACCCAGAACTTGACCATGATAGAAGAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000167281.8 ENSMUST00000168902.8 |
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| 3UTR CAA 90 bp | TCGGGTGATTCAAACAACGACTGTAGCTTCATGTCCTGCAGAGACTaGGTAAGTTCGCCTTCGAAGCTCAGCTTCAGCTTGGGGACAGTC | + |
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Preference number: 2 (lower is better) Translates to: SGDSNNDCSFMSCRD*VSSPSKLSFSLGTV Trigger: GACTGTCCCCAAGCTGAAGCTGAGCTTCGAAGGCGAACTTACCAAGTCTCTGCAGGACATGAAGCTACAGTCGTTGTTTGAATCACCCGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167281.8 ENSMUST00000168902.8 |
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| 3UTR CAA 90 bp | CACTCGAAAGCAGCCCTGTGTTCCACTTGGGTGAGCTTCACGGGTTaGCCAGTAATCTTGCTGAAGTCGGGTGATTCAAACAACGACTGT | + |
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Preference number: 2 (lower is better) Translates to: HSKAALCSTWVSFTG*PVILLKSGDSNNDC Trigger: ACAGTCGTTGTTTGAATCACCCGACTTCAGCAAGATTACTGGCAAACCCGTGAAGCTCACCCAAGTGGAACACAGGGCTGCTTTCGAGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000167281.8 ENSMUST00000168902.8 |
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| 3UTR CAA 90 bp | TTCGCCTTCGAAGCTCAGCTTCAGCTTGGGGACAGTCAGCACAGCTaGGATAGTCTTCAGTTCTCGGTCGATGTCATGAATGAACTCAGA | + |
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Preference number: 2 (lower is better) Translates to: FAFEAQLQLGDSQHS*DSLQFSVDVMNELR Trigger: TCTGAGTTCATTCATGACATCGACCGAGAACTGAAGACTATCCAAGCTGTGCTGACTGTCCCCAAGCTGAAGCTGAGCTTCGAAGGCGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167281.8 ENSMUST00000168902.8 |
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| 3UTR CAA 90 bp | AAGAAGATGATGCTCATACTTCCTGTCAAGGGCAGCTGGGCAATCTaGCAGTTGAGATCAGAGTCCAAGCCGTATCGTAAGATGGCCTTA | + |
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Preference number: 2 (lower is better) Translates to: KKMMLILPVKGSWAI*QLRSESKPYRKMAL Trigger: TAAGGCCATCTTACGATACGGCTTGGACTCTGATCTCAACTGCAAGATTGCCCAGCTGCCCTTGACAGGAAGTATGAGCATCATCTTCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000167281.8 ENSMUST00000168902.8 |
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| 3UTR-3UTR TCA 90 bp | GTTCCTCTTCCTCATCCACCTGCACTCCGAGAACAGGAAATGGTGACTTTGGCACAGTTTCTCTCCATATaGAACAGCTTCAAACAGGAG | + |
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Preference number: 2 (lower is better) Translates to: VPLPHPPALREQEMVTLAQFLSI*NSFKQE Trigger: CTCCTGTTTGAAGCTGTTTCATATGGAGAGAAACTG...TGCCAAAGTCACCATTTCCTGTTCTCGGAGTGCAGGTGGATGAGGAAGAGGAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000769.14 |
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| 3UTR CCA 72 bp | GTGTGTGGAGGTGCCCTCCGGGGACGGGGGCCCTCCTaGGGCAGGACGTTCCTCTTCCTCATCCACCTGCAC | + |
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Preference number: 3 (lower is better) Translates to: VCGGALRGRGPS*GRTFLFLIHLH Trigger: GTGCAGGTGGATGAGGAAGAGGAACGTCCTGCCCCAGGAGGGCCCCCGTCCCCGGAGGGCACCTCCACACAC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000769.14 |
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| 3UTR GCA 72 bp | CCTCCTGGGGCAGGACGTTCCTCTTCCTCATCCACCTaGACTCCGAGAACAGGAAATGGTGACTTTGGCAGA | + |
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Preference number: 3 (lower is better) Translates to: PPGAGRSSSSST*TPRTGNGDFGR Trigger: TCTGCCAAAGTCACCATTTCCTGTTCTCGGAGTGCAGGTGGATGAGGAAGAGGAACGTCCTGCCCCAGGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000769.14 |
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| 3UTR TCA 72 bp | GACATTAAGTACTACTGGGGTCCAGGATTCTGCCTATaGAGAGGAGGGCCCCCGTGTCCGTGTCCCTCAGAA | + |
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Preference number: 3 (lower is better) Translates to: DIKYYWGPGFCL*RGGPPCPCPSE Trigger: TTCTGAGGGACACGGACACGGGGGCCCTCCTCTTCATAGGCAGAATCCTGGACCCCAGTAGTACTTAATGTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168902.8 |
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| 3UTR-3UTR CAA 90 bp | CTTGGTAAGTTCGCCTTCGAAGCTCAGCTTCAGCTTGGGGACAGTCAGCACAGCTGGGCAATCTTGCAGTaGAGATCAGAGTCCAAGCCG | + |
|
Preference number: 3 (lower is better) Translates to: LGKFAFEAQLQLGDSQHSWAILQ*RSESKP Trigger: CGGCTTGGACTCTGATCTCAACTGCAAGATTGCCCA...GCTGTGCTGACTGTCCCCAAGCTGAAGCTGAGCTTCGAAGGCGAACTTACCAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167281.8 ENSMUST00000168902.8 |
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| 3UTR-3UTR CAA 90 bp | TGCAGAGACTTGGTAAGTTCGCCTTCGAAGCTCAGCTTCAGCTTGGGGACAGTCTTTCTCGAGTCAAACTaGGTTACCCACTGCCCCTTG | + |
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Preference number: 3 (lower is better) Translates to: CRDLVSSPSKLSFSLGTVFLESN*VTHCPL Trigger: CAAGGGGCAGTGGGTAACCAAGTTTGACTCGAGAAA...GACTGTCCCCAAGCTGAAGCTGAGCTTCGAAGGCGAACTTACCAAGTCTCTGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168902.8 |
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| 3UTR TCA 72 bp | ATCATGGGGACTCTCACGGTCCTGTCCTCGTCCAAATaGAAATCCTGGAGGGTCGTCTTTCTCGAGTCAAAC | + |
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Preference number: 3 (lower is better) Translates to: IMGTLTVLSSSK*KSWRVVFLESN Trigger: GTTTGACTCGAGAAAGACGACCCTCCAGGATTTTCATTTGGACGAGGACAGGACCGTGAGAGTCCCCATGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168902.8 |
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| 3UTR TCA 72 bp | TACTTCCTGTCAAGGGCAGCTGGGCAATCTTGCAGTTaGGATCAGAGTCCAAGCCGTATCGTAAGATGGCCT | + |
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Preference number: 3 (lower is better) Translates to: YFLSRAAGQSCS*DQSPSRIVRWP Trigger: AGGCCATCTTACGATACGGCTTGGACTCTGATCTCAACTGCAAGATTGCCCAGCTGCCCTTGACAGGAAGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000167281.8 ENSMUST00000168902.8 |
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| 3UTR CCA 72 bp | TCTTCATTCCACTCGAAAGCAGCCCTGTGTTCCACTTaGGTGAGCTTCACGGGTTTGCCAGTAATCTTGCTG | + |
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Preference number: 3 (lower is better) Translates to: SSFHSKAALCST*VSFTGLPVILL Trigger: CAGCAAGATTACTGGCAAACCCGTGAAGCTCACCCAAGTGGAACACAGGGCTGCTTTCGAGTGGAATGAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000167281.8 ENSMUST00000168902.8 |
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| 3UTR CCA 72 bp | AAGAAGATGATGCTCATACTTCCTGTCAAGGGCAGCTaGGCAATCTTGCAGTTGAGATCAGAGTCCAAGCCG | + |
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Preference number: 3 (lower is better) Translates to: KKMMLILPVKGS*AILQLRSESKP Trigger: CGGCTTGGACTCTGATCTCAACTGCAAGATTGCCCAGCTGCCCTTGACAGGAAGTATGAGCATCATCTTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000167281.8 ENSMUST00000168902.8 |
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| 3UTR TCA 72 bp | TATAATCAGCTTCCCTCTGGGGGTTCTGTAGAGCACTaGGACATTAAGTACTACTGGGGTCCAGGATTCTGC | + |
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Preference number: 3 (lower is better) Translates to: YNQLPSGGSVEH*DIKYYWGPGFC Trigger: GCAGAATCCTGGACCCCAGTAGTACTTAATGTCTCAGTGCTCTACAGAACCCCCAGAGGGAAGCTGATTATA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168902.8 |
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| 3UTR TCA 72 bp | ACAGCTTGGATAGTCTTCAGTTCTCGGTCGATGTCATaGATGAACTCAGAGGTGAGGCTCTCTTCTATCATG | + |
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Preference number: 3 (lower is better) Translates to: TAWIVFSSRSMS*MNSEVRLSSIM Trigger: CATGATAGAAGAGAGCCTCACCTCTGAGTTCATTCATGACATCGACCGAGAACTGAAGACTATCCAAGCTGT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000167281.8 ENSMUST00000168902.8 |
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| CDS-3UTR TCA 90 bp | GGCGTGCCTGCCCTTCAGAAGCAGAGGCAGCTTTATGAGTTGGGGGACCAGCTGGGGCCGTGGCCACGCTaGGTGGAGACAGCAGGACGT | + |
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Preference number: 4 (lower is better) Translates to: GVPALQKQRQLYELGDQLGPWPR*VETAGR Trigger: ACGTCCTGCTGTCTCCACTCAGCGTGGCCACGGCCC...CAGCTGGTCCCCCAACTCATAAAGCTGCCTCTGCTTCTGAAGGGCAGGCACGCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000125982.2 |
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| CDS-3UTR CCA 90 bp | CAAGTGTTAGTAATTGTGTGTGGAGGTGCCCTCCGGGGACGGGGGCCCTCCTGGCGTGCTGTCCGGGACTaGGGAGCCCTCAGAGCTGCT | + |
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Preference number: 4 (lower is better) Translates to: QVLVIVCGGALRGRGPSWRAVRD*GALRAA Trigger: AGCAGCTCTGAGGGCTCCCCAGTCCCGGACAGCACG...CCAGGAGGGCCCCCGTCCCCGGAGGGCACCTCCACACACAATTACTAACACTTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000769.14 |
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| CDS-3UTR TCA 90 bp | AACCCCACAGCAAGTGTTAGTAATTGTGTGTGGAGGTGCCCTCCGGGGACGGGGGGGCCGTGGCCACGCTaGGTGGAGACAGCAGGACGT | + |
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Preference number: 4 (lower is better) Translates to: NPTASVSNCVWRCPPGTGGPWPR*VETAGR Trigger: ACGTCCTGCTGTCTCCACTCAGCGTGGCCACGGCCC...CCCCGTCCCCGGAGGGCACCTCCACACACAATTACTAACACTTGCTGTGGGGTT 63% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000000769.14 |
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| CDS-3UTR TCA 90 bp | GGTAAGTTCGCCTTCGAAGCTCAGCTTCAGCTTGGGGACAGTCAGCACAGCTTGCTCGAGGGTTGCCCGTaGGGATCCGGGGCCTGGTCC | + |
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Preference number: 4 (lower is better) Translates to: GKFAFEAQLQLGDSQHSLLEGCP*GSGAWS Trigger: GGACCAGGCCCCGGATCCTCACGGGCAACCCTCGAG...CAAGCTGTGCTGACTGTCCCCAAGCTGAAGCTGAGCTTCGAAGGCGAACTTACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000167281.8 ENSMUST00000168902.8 |
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| CDS-3UTR CCA 90 bp | CCTGCCCTTCAGAAGCAGAGGCAGCTTTATGAGTTGGGGGACCAGCTGAGACTCCTGCTGGGGACGTTCTaGCTGCTGCCGTGCCCGAGC | + |
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Preference number: 4 (lower is better) Translates to: PALQKQRQLYELGDQLRLLLGTF*LLPCPS Trigger: GCTCGGGCACGGCAGCAGCCAGAACGTCCCCAGCAG...GAGTCTCAGCTGGTCCCCCAACTCATAAAGCTGCCTCTGCTTCTGAAGGGCAGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000125982.2 |
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| CDS-3UTR TCA 90 bp | CAGGGGCAGGAAGAAGATGATGCTCATACTTCCTGTCAAGGGCAGCTGGGCAATCTCGAGGGTTGCCCGTaGGGATCCGGGGCCTGGTCC | + |
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Preference number: 4 (lower is better) Translates to: QGQEEDDAHTSCQGQLGNLEGCP*GSGAWS Trigger: GGACCAGGCCCCGGATCCTCACGGGCAACCCTCGAG...ATTGCCCAGCTGCCCTTGACAGGAAGTATGAGCATCATCTTCTTCCTGCCCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000167281.8 ENSMUST00000168902.8 |
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| CDS-3UTR CCA 90 bp | GCTACCGGCCGCCTTCCTGGAATGTATAATCAGCTTCCCTCTGGGGGTTCTGTACTGCTGGGGACGTTCTaGCTGCTGCCGTGCCCGAGC | + |
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Preference number: 4 (lower is better) Translates to: ATGRLPGMYNQLPSGGSVLLGTF*LLPCPS Trigger: GCTCGGGCACGGCAGCAGCCAGAACGTCCCCAGCAG...TACAGAACCCCCAGAGGGAAGCTGATTATACATTCCAGGAAGGCGGCCGGTAGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000000769.14 ENSMUST00000168902.8 |
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| CDS-3UTR CCA 90 bp | CCTGCCCTTCAGAAGCAGAGGCAGCTTTATGAGTTGGGGGACCAGCTGAGACTCCGTGCTGTCCGGGACTaGGGAGCCCTCAGAGCTGCT | + |
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Preference number: 4 (lower is better) Translates to: PALQKQRQLYELGDQLRLRAVRD*GALRAA Trigger: AGCAGCTCTGAGGGCTCCCCAGTCCCGGACAGCACG...GAGTCTCAGCTGGTCCCCCAACTCATAAAGCTGCCTCTGCTTCTGAAGGGCAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000125982.2 |
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| CDS-3UTR GCA 90 bp | GCTACCGGCCGCCTTCCTGGAATGTATAATCAGCTTCCCTCTGGGGGTTCTGTAGGGAGCCCTCAGAGCTaGTGGGGACGTTCTGGCTGC | + |
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Preference number: 4 (lower is better) Translates to: ATGRLPGMYNQLPSGGSVGSPQS*WGRSGC Trigger: GCAGCCAGAACGTCCCCAGCAGCTCTGAGGGCTCCC...TACAGAACCCCCAGAGGGAAGCTGATTATACATTCCAGGAAGGCGGCCGGTAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000769.14 |
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| CDS-3UTR GCA 90 bp | GCAAGTGTTAGTAATTGTGTGTGGAGGTGCCCTCCGGGGACGGGGGCCCTCCTGGGAGCTCCTTGTAGGTaGTGTGGATGTCAGGGTTGG | + |
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Preference number: 4 (lower is better) Translates to: ASVSNCVWRCPPGTGALLGAPCR*CGCQGW Trigger: CCAACCCTGACATCCACAGCACCTACAAGGAGCTCC...CAGGAGGGCCCCCGTCCCCGGAGGGCACCTCCACACACAATTACTAACACTTGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000769.14 |
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| CDS-3UTR CCA 90 bp | CAGGGGCAGGAAGAAGATGATGCTCATACTTCCTGTCAAGGGCAGCTGGGCAATCTGCTGGGGACGTTCTaGCTGCTGCCGTGCCCGAGC | + |
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Preference number: 4 (lower is better) Translates to: QGQEEDDAHTSCQGQLGNLLGTF*LLPCPS Trigger: GCTCGGGCACGGCAGCAGCCAGAACGTCCCCAGCAG...ATTGCCCAGCTGCCCTTGACAGGAAGTATGAGCATCATCTTCTTCCTGCCCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168902.8 |
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| CDS-3UTR CCA 90 bp | CAAGTGTTAGTAATTGTGTGTGGAGGTGCCCTCCGGGGACGGGGGCCCTCCTGGGATCGTAGCCGAAGTTaGAGACAGCTGCTGCCAGCT | + |
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Preference number: 4 (lower is better) Translates to: QVLVIVCGGALRGRGPSWDRSRS*RQLLPA Trigger: AGCTGGCAGCAGCTGTCTCCAACTTCGGCTACGATC...CCAGGAGGGCCCCCGTCCCCGGAGGGCACCTCCACACACAATTACTAACACTTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000769.14 |
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| CDS-3UTR TCA 90 bp | CAAGTGTTAGTAATTGTGTGTGGAGGTGCCCTCCGGGGACGGGGGCCCTCCTGGGGGCAATCTTGCAGTTaGGATCAGAGTCCAAGCCGT | + |
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Preference number: 4 (lower is better) Translates to: QVLVIVCGGALRGRGPSWGQSCS*DQSPSR Trigger: ACGGCTTGGACTCTGATCTCAACTGCAAGATTGCCC...CCAGGAGGGCCCCCGTCCCCGGAGGGCACCTCCACACACAATTACTAACACTTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000000769.14 |
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| CDS-3UTR CCA 90 bp | TCCAGGATTCTGCCTATGAAGAGGAGGGCCCCCGTGTCCGTGTCCCTCAGAACAAGTTCTCAGAGCTGCTaGGGACGTTCTGGCTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: SRILPMKRRAPVSVSLRTSSQSC*GRSGCC Trigger: GCAGCAGCCAGAACGTCCCCAGCAGCTCTGAGAACT...TGTTCTGAGGGACACGGACACGGGGGCCCTCCTCTTCATAGGCAGAATCCTGGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168902.8 |
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| CDS-3UTR GCA 90 bp | ACACTGAAGCTACCGGCCGCCTTCCTGGAATGTATAATCAGCTTCCCTCTGGGGGCTGGGGCTGCTTCCTaGCCCCTCTTCATTCCACTC | + |
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Preference number: 4 (lower is better) Translates to: TLKLPAAFLECIISFPLGAGAAS*PLFIPL Trigger: GAGTGGAATGAAGAGGGGGCAGGAAGCAGCCCCAGC...CCCCAGAGGGAAGCTGATTATACATTCCAGGAAGGCGGCCGGTAGCTTCAGTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000000769.14 |
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| CDS-3UTR TCA 90 bp | ACAGCAAGTGTTAGTAATTGTGTGTGGAGGTGCCCTCCGGGGACGGGGGCCCTCAGAGAGCCCGGTGAATaGCAGACTCTGTTCGATGTT | + |
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Preference number: 4 (lower is better) Translates to: TASVSNCVWRCPPGTGALREPGE*QTLFDV Trigger: AACATCGAACAGAGTCTGTCATTCACCGGGCTCTCT...GAGGGCCCCCGTCCCCGGAGGGCACCTCCACACACAATTACTAACACTTGCTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000769.14 |
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| CDS-3UTR GCA 90 bp | CTTCAGAAGCAGAGGCAGCTTTATGAGTTGGGGGACCAGCTGAGACTCTATAGAGGGAGCCCTCAGAGCTaGTGGGGACGTTCTGGCTGC | + |
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Preference number: 4 (lower is better) Translates to: LQKQRQLYELGDQLRLYRGSPQS*WGRSGC Trigger: GCAGCCAGAACGTCCCCAGCAGCTCTGAGGGCTCCC...TCTATAGAGTCTCAGCTGGTCCCCCAACTCATAAAGCTGCCTCTGCTTCTGAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000125982.2 |
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| CDS-3UTR CCA 90 bp | GCCCCCTCTTCATTCCACTCGAAAGCAGCCCTGTGTTCCACTTGGGTGAGCTTCTGGGCATTTCCCTCGTaGACCGGGCAATCTTCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: APSSFHSKAALCSTWVSFWAFPS*TGQSSL Trigger: AAGGGAAGATTGCCCGGTCCACGAGGGAAATGCCCA...GAAGCTCACCCAAGTGGAACACAGGGCTGCTTTCGAGTGGAATGAAGAGGGGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167281.8 |
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| CDS-3UTR GCA 90 bp | GAGGCTCTCTTCTATCATGGTCAAGTTCTGGGTCACGGTCAGGGGCAGGAAGAACGAAGTTCTCAGAGCTaGTGGGGACGTTCTGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: EALFYHGQVLGHGQGQEERSSQS*WGRSGC Trigger: GCAGCCAGAACGTCCCCAGCAGCTCTGAGAACTTCG...TTCTTCCTGCCCCTGACCGTGACCCAGAACTTGACCATGATAGAAGAGAGCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168902.8 |
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| CDS-3UTR CCA 90 bp | CTTCAGAAGCAGAGGCAGCTTTATGAGTTGGGGGACCAGCTGAGACTCTATAGAAGCCCTCAGAGCTGCTaGGGACGTTCTGGCTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LQKQRQLYELGDQLRLYRSPQSC*GRSGCC Trigger: GCAGCAGCCAGAACGTCCCCAGCAGCTCTGAGGGCT...TCTATAGAGTCTCAGCTGGTCCCCCAACTCATAAAGCTGCCTCTGCTTCTGAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000125982.2 |
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| CDS-3UTR CCA 90 bp | AACCCCACAGCAAGTGTTAGTAATTGTGTGTGGAGGTGCCCTCCGGGGACGGGGGGCTCTCTTCTATCATaGTCAAGTTCTGGGTCACGG | + |
|
Preference number: 4 (lower is better) Translates to: NPTASVSNCVWRCPPGTGGSLLS*SSSGSR Trigger: CCGTGACCCAGAACTTGACCATGATAGAAGAGAGCC...CCCCGTCCCCGGAGGGCACCTCCACACACAATTACTAACACTTGCTGTGGGGTT 56% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000000769.14 |
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| CDS-3UTR TCA 90 bp | ACACTGAAGCTACCGGCCGCCTTCCTGGAATGTATAATCAGCTTCCCTCTGGGGTTCTGGAAGCACTCTTaGGGTTCTTCTCAGGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: TLKLPAAFLECIISFPLGFWKHS*GSSQGQ Trigger: CTGCCCCTGAGAAGAACCTCAAGAGTGCTTCCAGAA...CCCCAGAGGGAAGCTGATTATACATTCCAGGAAGGCGGCCGGTAGCTTCAGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000769.14 |
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| CDS-3UTR TCA 90 bp | ACACTGAAGCTACCGGCCGCCTTCCTGGAATGTATAATCAGCTTCCCTCTGGGGGATGGCCTTAGGATCTaGCATCATGGGGACTCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: TLKLPAAFLECIISFPLGDGLRI*HHGDSH Trigger: GTGAGAGTCCCCATGATGTCAGATCCTAAGGCCATC...CCCCAGAGGGAAGCTGATTATACATTCCAGGAAGGCGGCCGGTAGCTTCAGTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000769.14 |
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| CDS-3UTR TCA 90 bp | GGTCACGGTCAGGGGCAGGAAGAAGATGATGCTCATACTTCCTGTCAAGGGCAGCTTGGTTACCCACCTTaGAGTAAGCCACGCCAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: GHGQGQEEDDAHTSCQGQLGYPP*SKPRQG Trigger: TCCTTGGCGTGGCTTACTTCAAGGTGGGTAACCAAG...CTGCCCTTGACAGGAAGTATGAGCATCATCTTCTTCCTGCCCCTGACCGTGACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167281.8 |
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| CDS-3UTR GCA 90 bp | GCAGGACGTTCCTCTTCCTCATCCACCTGCACTCCGAGAACAGGAAATGGTGACGAAGTTGGAGACAGCTaGTGCCAGCTTGTTCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: AGRSSSSSTCTPRTGNGDEVGDS*CQLVHR Trigger: CCTGTGAACAAGCTGGCAGCAGCTGTCTCCAACTTC...GTCACCATTTCCTGTTCTCGGAGTGCAGGTGGATGAGGAAGAGGAACGTCCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000769.14 |
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| CDS-3UTR CCA 90 bp | ACATTAAGGAAAAGCTCTTTTATTGCAGAGGCTACACTGAAGCTACCGGCCGCCAGCCCTCAGAGCTGCTaGGGACGTTCTGGCTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: TLRKSSFIAEATLKLPAASPQSC*GRSGCC Trigger: GCAGCAGCCAGAACGTCCCCAGCAGCTCTGAGGGCT...GGCGGCCGGTAGCTTCAGTGTAGCCTCTGCAATAAAAGAGCTTTTCCTTAATGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000769.14 |
||
| CDS-3UTR CCA 90 bp | GCCCTTCAGAAGCAGAGGCAGCTTTATGAGTTGGGGGACCAGCTGAGACTCTATGATCGTAGCCGAAGTTaGAGACAGCTGCTGCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: ALQKQRQLYELGDQLRLYDRSRS*RQLLPA Trigger: AGCTGGCAGCAGCTGTCTCCAACTTCGGCTACGATC...ATAGAGTCTCAGCTGGTCCCCCAACTCATAAAGCTGCCTCTGCTTCTGAAGGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000125982.2 |
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| CDS-3UTR TCA 90 bp | ACCAGTTTCTCTCCATATGAAACAGCTTCAAACAGGAGAAGGAAGAAGCAAACACTCGAGGGTTGCCCGTaGGGATCCGGGGCCTGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: TSFSPYETASNRRRKKQTLEGCP*GSGAWS Trigger: GGACCAGGCCCCGGATCCTCACGGGCAACCCTCGAG...TGTTTGCTTCTTCCTTCTCCTGTTTGAAGCTGTTTCATATGGAGAGAAACTGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000769.14 |
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| CDS-3UTR GCA 90 bp | GTCCTGCAGAGACTTGGTAAGTTCGCCTTCGAAGCTCAGCTTCAGCTTGGGGACCCTTTCATCTGGGCCTaGACCCAGTTGTTAATCTCC | + |
|
Preference number: 4 (lower is better) Translates to: VLQRLGKFAFEAQLQLGDPFIWA*TQLLIS Trigger: GGAGATTAACAACTGGGTGCAGGCCCAGATGAAAGG...GTCCCCAAGCTGAAGCTGAGCTTCGAAGGCGAACTTACCAAGTCTCTGCAGGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167281.8 |
||
| CDS-3UTR TCA 90 bp | CTTCAGAAGCAGAGGCAGCTTTATGAGTTGGGGGACCAGCTGAGACTCTATAGATGTTCACAGGGACCTTaGAGAAGGGGTCCTCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LQKQRQLYELGDQLRLYRCSQGP*RRGPPP Trigger: AGGAGGAGGACCCCTTCTTCAAGGTCCCTGTGAACA...TCTATAGAGTCTCAGCTGGTCCCCCAACTCATAAAGCTGCCTCTGCTTCTGAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000125982.2 |
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| CDS-3UTR TCA 90 bp | TCTCACGGTCCTGTCCTCGTCCAAATGAAAATCCTGGAGGGTCGTCTTTCTCGATTCTGGAAGCACTCTTaGGGTTCTTCTCAGGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SHGPVLVQMKILEGRLSRFWKHS*GSSQGQ Trigger: CTGCCCCTGAGAAGAACCTCAAGAGTGCTTCCAGAA...TCGAGAAAGACGACCCTCCAGGATTTTCATTTGGACGAGGACAGGACCGTGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167281.8 |
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| CDS-3UTR TCA 90 bp | ACCAGTTTCTCTCCATATGAAACAGCTTCAAACAGGAGAAGGAAGAAGCAAACAAGTCTAGCGGGAAGGTaGGGCGGACGGGCTGGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: TSFSPYETASNRRRKKQTSLAGR*GGRAGG Trigger: GCCTCCAGCCCGTCCGCCTCACCTTCCCGCTAGACT...TGTTTGCTTCTTCCTTCTCCTGTTTGAAGCTGTTTCATATGGAGAGAAACTGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000769.14 |
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| CDS-3UTR CCA 90 bp | ACACTGAAGCTACCGGCCGCCTTCCTGGAATGTATAATCAGCTTCCCTCTGGGGATCTTCCCTTTCATCTaGGCCTGCACCCAGTTGTTA | + |
|
Preference number: 4 (lower is better) Translates to: TLKLPAAFLECIISFPLGIFPFI*ACTQLL Trigger: TAACAACTGGGTGCAGGCCCAGATGAAAGGGAAGAT...CCCCAGAGGGAAGCTGATTATACATTCCAGGAAGGCGGCCGGTAGCTTCAGTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000769.14 |
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| CDS-3UTR TCA 90 bp | CAGAAGCAGAGGCAGCTTTATGAGTTGGGGGACCAGCTGAGACTCTATAGACTTTTCTGGAAGCACTCTTaGGGTTCTTCTCAGGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: QKQRQLYELGDQLRLYRLFWKHS*GSSQGQ Trigger: CTGCCCCTGAGAAGAACCTCAAGAGTGCTTCCAGAA...AAGTCTATAGAGTCTCAGCTGGTCCCCCAACTCATAAAGCTGCCTCTGCTTCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000125982.2 |
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| CDS-3UTR TCA 90 bp | GTTCCTCTTCCTCATCCACCTGCACTCCGAGAACAGGAAATGGTGACTTTGGCAGGGGCAGGAAGAAGATaGTGCTCATACTTCCTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: VPLPHPPALREQEMVTLAGAGRR*CSYFLS Trigger: TGACAGGAAGTATGAGCATCATCTTCTTCCTGCCCC...TGCCAAAGTCACCATTTCCTGTTCTCGGAGTGCAGGTGGATGAGGAAGAGGAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000769.14 |
||
| CDS-3UTR GCA 90 bp | CAGAAGCAGAGGCAGCTTTATGAGTTGGGGGACCAGCTGAGACTCTATAGACTTGAAGTTGGAGACAGCTaGTGCCAGCTTGTTCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: QKQRQLYELGDQLRLYRLEVGDS*CQLVHR Trigger: CCTGTGAACAAGCTGGCAGCAGCTGTCTCCAACTTC...AAGTCTATAGAGTCTCAGCTGGTCCCCCAACTCATAAAGCTGCCTCTGCTTCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000125982.2 |
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| CDS-3UTR CCA 90 bp | TGTCAAGGGCAGCTGGGCAATCTTGCAGTTGAGATCAGAGTCCAAGCCGTATCGATCTTCCCTTTCATCTaGGCCTGCACCCAGTTGTTA | + |
|
Preference number: 4 (lower is better) Translates to: CQGQLGNLAVEIRVQAVSIFPFI*ACTQLL Trigger: TAACAACTGGGTGCAGGCCCAGATGAAAGGGAAGAT...CGATACGGCTTGGACTCTGATCTCAACTGCAAGATTGCCCAGCTGCCCTTGACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167281.8 |
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| 3UTR CAA 72 bp | CTCTTCATTCCACTCGAAAGCAGCCCTGTGTTCCACTaGGGTGAGCTTCACGGGTTTGCCAGTAATCTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LFIPLESSPVFH*GELHGFASNLA Trigger: AGCAAGATTACTGGCAAACCCGTGAAGCTCACCCAAGTGGAACACAGGGCTGCTTTCGAGTGGAATGAAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000167281.8 ENSMUST00000168902.8 |
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| 3UTR CAA 72 bp | CATCCACCTGCACTCCGAGAACAGGAAATGGTGACTTaGGCAGAGCTTAAGCAGAGCCCGTTCATGTTACAA | + |
|
Preference number: 4 (lower is better) Translates to: HPPALREQEMVT*AELKQSPFMLQ Trigger: TTGTAACATGAACGGGCTCTGCTTAAGCTCTGCCAAAGTCACCATTTCCTGTTCTCGGAGTGCAGGTGGATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000769.14 |
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| 3UTR CAA 72 bp | ATGCTCATACTTCCTGTCAAGGGCAGCTGGGCAATCTaGCAGTTGAGATCAGAGTCCAAGCCGTATCGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: MLILPVKGSWAI*QLRSESKPYRK Trigger: CTTACGATACGGCTTGGACTCTGATCTCAACTGCAAGATTGCCCAGCTGCCCTTGACAGGAAGTATGAGCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000167281.8 ENSMUST00000168902.8 |
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| 3UTR CAA 72 bp | GAAGCTCAGCTTCAGCTTGGGGACAGTCAGCACAGCTaGGATAGTCTTCAGTTCTCGGTCGATGTCATGAAT | + |
|
Preference number: 4 (lower is better) Translates to: EAQLQLGDSQHS*DSLQFSVDVMN Trigger: ATTCATGACATCGACCGAGAACTGAAGACTATCCAAGCTGTGCTGACTGTCCCCAAGCTGAAGCTGAGCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167281.8 ENSMUST00000168902.8 |
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| CDS-3UTR TCA 90 bp | GCAAACATTAAGGAAAAGCTCTTTTATTGCAGAGGCTACACTGAAGCTACCGGCTTACCCACTGCCCCTTaGAGTAAGCCACGCCAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: ANIKEKLFYCRGYTEATGLPTAP*SKPRQG Trigger: TCCTTGGCGTGGCTTACTTCAAGGGGCAGTGGGTAA...GCCGGTAGCTTCAGTGTAGCCTCTGCAATAAAAGAGCTTTTCCTTAATGTTTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000000769.14 |
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| 3UTR CAA 72 bp | TCAAACAACGACTGTAGCTTCATGTCCTGCAGAGACTaGGTAAGTTCGCCTTCGAAGCTCAGCTTCAGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: SNNDCSFMSCRD*VSSPSKLSFSL Trigger: CAAGCTGAAGCTGAGCTTCGAAGGCGAACTTACCAAGTCTCTGCAGGACATGAAGCTACAGTCGTTGTTTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000167281.8 ENSMUST00000168902.8 |
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| CDS-3UTR CCA 90 bp | GCAGAGCTTAAGCAGAGCCCGTTCATGTTACAAGTATGTAAATTCATAAGGACCATCATGGTCAAGTTCTaGGTCACGGTCAGGGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: AELKQSPFMLQVCKFIRTIMVKF*VTVRGR Trigger: CCTGCCCCTGACCGTGACCCAGAACTTGACCATGAT...GGTCCTTATGAATTTACATACTTGTAACATGAACGGGCTCTGCTTAAGCTCTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000769.14 |
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| CDS-3UTR TCA 90 bp | ACCAGTTTCTCTCCATATGAAACAGCTTCAAACAGGAGAAGGAAGAAGCAAACATGTTCACAGGGACCTTaGAGAAGGGGTCCTCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: TSFSPYETASNRRRKKQTCSQGP*RRGPPP Trigger: AGGAGGAGGACCCCTTCTTCAAGGTCCCTGTGAACA...TGTTTGCTTCTTCCTTCTCCTGTTTGAAGCTGTTTCATATGGAGAGAAACTGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000769.14 |
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| CDS-3UTR GCA 90 bp | GCAAACATTAAGGAAAAGCTCTTTTATTGCAGAGGCTACACTGAAGCTACCGGCCCTTTCATCTGGGCCTaGACCCAGTTGTTAATCTCC | + |
|
Preference number: 4 (lower is better) Translates to: ANIKEKLFYCRGYTEATGPFIWA*TQLLIS Trigger: GGAGATTAACAACTGGGTGCAGGCCCAGATGAAAGG...GCCGGTAGCTTCAGTGTAGCCTCTGCAATAAAAGAGCTTTTCCTTAATGTTTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000769.14 |
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| CDS-3UTR TCA 90 bp | GCAGAGCTTAAGCAGAGCCCGTTCATGTTACAAGTATGTAAATTCATAAGGACCTCTCGGTCGATGTCATaGATGAACTCAGAGGTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: AELKQSPFMLQVCKFIRTSRSMS*MNSEVR Trigger: CCTCACCTCTGAGTTCATTCATGACATCGACCGAGA...GGTCCTTATGAATTTACATACTTGTAACATGAACGGGCTCTGCTTAAGCTCTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000769.14 |
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| CDS-3UTR CCA 90 bp | TTCTCTCCATATGAAACAGCTTCAAACAGGAGAAGGAAGAAGCAAACATTAAGGTGGGCATTTCCCTCGTaGACCGGGCAATCTTCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: FSPYETASNRRRKKQTLRWAFPS*TGQSSL Trigger: AAGGGAAGATTGCCCGGTCCACGAGGGAAATGCCCA...CCTTAATGTTTGCTTCTTCCTTCTCCTGTTTGAAGCTGTTTCATATGGAGAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000769.14 |
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| CDS-3UTR CCA 90 bp | TTCTCTCCATATGAAACAGCTTCAAACAGGAGAAGGAAGAAGCAAACATTAAGGCCTGTCAAGGGCAGCTaGGCAATCTTGCAGTTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: FSPYETASNRRRKKQTLRPVKGS*AILQLR Trigger: TCTCAACTGCAAGATTGCCCAGCTGCCCTTGACAGG...CCTTAATGTTTGCTTCTTCCTTCTCCTGTTTGAAGCTGTTTCATATGGAGAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000769.14 |
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| CDS-3UTR CCA 90 bp | TTCTCTCCATATGAAACAGCTTCAAACAGGAGAAGGAAGAAGCAAACATTAAGGAGCTCAGCTTCAGCTTaGGGACAGTCAGCACAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: FSPYETASNRRRKKQTLRSSASA*GQSAQL Trigger: AAGCTGTGCTGACTGTCCCCAAGCTGAAGCTGAGCT...CCTTAATGTTTGCTTCTTCCTTCTCCTGTTTGAAGCTGTTTCATATGGAGAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000769.14 |
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| CDS-3UTR CCA 90 bp | TTCTCTCCATATGAAACAGCTTCAAACAGGAGAAGGAAGAAGCAAACATTAAGGACAGTCAGCACAGCTTaGATAGTCTTCAGTTCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: FSPYETASNRRRKKQTLRTVSTA*IVFSSR Trigger: CCGAGAACTGAAGACTATCCAAGCTGTGCTGACTGT...CCTTAATGTTTGCTTCTTCCTTCTCCTGTTTGAAGCTGTTTCATATGGAGAGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000769.14 |
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| CDS GCA 90 bp | CCACGGGCTCGCCCGTGCTGTCCGGGACTGGGGAGCCCTCAGAGCTaGTGGGGACGTTCTGGCTGCTGCCGTGCCCGAGCAGGGCTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: PRARPCCPGLGSPQS*WGRSGCCRARAGLQ Trigger: CTGGAGCCCTGCTCGGGCACGGCAGCAGCCAGAACGTCCCCAGCAGCTCTGAGGGCTCCCCAGTCCCGGACAGCACGGGCGAGCCCGTGG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000000769.14 ENSMUST00000125982.2 ENSMUST00000137103.8 ENSMUST00000138661.8 ENSMUST00000155009.2 |
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| CDS CCA 90 bp | CGGGCTCGCCCGTGCTGTCCGGGACTGGGGAGCCCTCAGAGCTGCTaGGGACGTTCTGGCTGCTGCCGTGCCCGAGCAGGGCTCCAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: RARPCCPGLGSPQSC*GRSGCCRARAGLQS Trigger: GGACTGGAGCCCTGCTCGGGCACGGCAGCAGCCAGAACGTCCCCAGCAGCTCTGAGGGCTCCCCAGTCCCGGACAGCACGGGCGAGCCCG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000000769.14 ENSMUST00000125982.2 ENSMUST00000137103.8 ENSMUST00000138661.8 ENSMUST00000155009.2 |
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| CDS GCA 90 bp | ACTGGGGAGCCCTCAGAGCTGCTGGGGACGTTCTGGCTGCTGCCGTaGCCGAGCAGGGCTCCAGTCCAGAGGAGTAGCACCAGGGCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: TGEPSELLGTFWLLP*PSRAPVQRSSTRAC Trigger: GCAGGCCCTGGTGCTACTCCTCTGGACTGGAGCCCTGCTCGGGCACGGCAGCAGCCAGAACGTCCCCAGCAGCTCTGAGGGCTCCCCAGT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000000769.14 ENSMUST00000125982.2 ENSMUST00000137103.8 ENSMUST00000138661.8 ENSMUST00000155009.2 |
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| CDS GCA 90 bp | GACTCGAAGTTCTCAGAGCTGCTGGGGACGTTCTGGCTGCTGCCGTaGCCGAGCAGGGCTCCAGTCCAGAGGAGTAGCACCAGGGCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: DSKFSELLGTFWLLP*PSRAPVQRSSTRAC Trigger: GCAGGCCCTGGTGCTACTCCTCTGGACTGGAGCCCTGCTCGGGCACGGCAGCAGCCAGAACGTCCCCAGCAGCTCTGAGAACTTCGAGTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168902.8 |
||
| CDS CCA 90 bp | GAGGGCCGTGGCCACGCTGAGTGGAGACAGCAGGACGTTGCCCGTTaGGCTGGCACTGGATCTCAGGCGGTACAGATCGTAGCCGAAGTT | + |
|
Preference number: 5 (lower is better) Translates to: EGRGHAEWRQQDVAR*AGTGSQAVQIVAEV Trigger: AACTTCGGCTACGATCTGTACCGCCTGAGATCCAGTGCCAGCCCAACGGGCAACGTCCTGCTGTCTCCACTCAGCGTGGCCACGGCCCTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000000769.14 ENSMUST00000125982.2 ENSMUST00000137103.8 ENSMUST00000138661.8 |
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| CDS CCA 90 bp | TCGAAGTTCCAGAGAAAGGGCAGAGAGGGCCGTGGCCACGCTGAGTaGAGACAGCAGGACGTTGCCCGTTGGGCTGGCACTGGATCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: SKFQRKGREGRGHAE*RQQDVARWAGTGSQ Trigger: CTGAGATCCAGTGCCAGCCCAACGGGCAACGTCCTGCTGTCTCCACTCAGCGTGGCCACGGCCCTCTCTGCCCTTTCTCTGGAACTTCGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138661.8 |
||
| CDS GCA 90 bp | TCCAGAGGGGCAACAAAGCTGGATTTGACTCGAAGTTCTCAGAGCTaGTGGGGACGTTCTGGCTGCTGCCGTGCCCGAGCAGGGCTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: SRGATKLDLTRSSQS*WGRSGCCRARAGLQ Trigger: CTGGAGCCCTGCTCGGGCACGGCAGCAGCCAGAACGTCCCCAGCAGCTCTGAGAACTTCGAGTCAAATCCAGCTTTGTTGCCCCTCTGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168902.8 |
||
| CDS-3UTR CAA 90 bp | CAAGTGTTAGTAATTGTGTGTGGAGGTGCCCTCCGGGGACGGGGGCCCTCCTGGTTGTTCACAGGGACCTaGAAGAAGGGGTCCTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: QVLVIVCGGALRGRGPSWLFTGT*KKGSSS Trigger: GGAGGAGGACCCCTTCTTCAAGGTCCCTGTGAACAA...CCAGGAGGGCCCCCGTCCCCGGAGGGCACCTCCACACACAATTACTAACACTTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000000769.14 |
||
| CDS TCA 90 bp | GCAATCTTCCCTTTCATCTGGGCCTGCACCCAGTTGTTAATCTCCTaGAGGTCTACTCGAGGGTTGCCCGTGAGGATCCGGGGCCTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: AIFPFIWACTQLLIS*RSTRGLPVRIRGLV Trigger: GACCAGGCCCCGGATCCTCACGGGCAACCCTCGAGTAGACCTTCAGGAGATTAACAACTGGGTGCAGGCCCAGATGAAAGGGAAGATTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000000769.14 ENSMUST00000137103.8 ENSMUST00000138661.8 ENSMUST00000167281.8 |
||
| CDS TCA 90 bp | GCCTGGTCCCATAGGACTTCTCCAGAGGGGCAACAAAGCTGGATTTaGCTCGAAGTTCTCAGAGCTGCTGGGGACGTTCTGGCTGCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: AWSHRTSPEGQQSWI*LEVLRAAGDVLAAA Trigger: GGCAGCAGCCAGAACGTCCCCAGCAGCTCTGAGAACTTCGAGTCAAATCCAGCTTTGTTGCCCCTCTGGAGAAGTCCTATGGGACCAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168902.8 |
||
| CDS GCA 90 bp | GGATCTCAGGCGGTACAGATCGTAGCCGAAGTTGGAGACAGCTGCTaGCAGCTTGTTCACAGGGACCTTGAAGAAGGGGTCCTCCTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: GSQAVQIVAEVGDSC*QLVHRDLEEGVLLL Trigger: GAGGAGGAGGACCCCTTCTTCAAGGTCCCTGTGAACAAGCTGGCAGCAGCTGTCTCCAACTTCGGCTACGATCTGTACCGCCTGAGATCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000000769.14 ENSMUST00000125982.2 ENSMUST00000137103.8 ENSMUST00000138661.8 |
||
| CDS GCA 90 bp | ACTGGATCTCAGGCGGTACAGATCGTAGCCGAAGTTGGAGACAGCTaGTGCCAGCTTGTTCACAGGGACCTTGAAGAAGGGGTCCTCCTC | + |
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Preference number: 5 (lower is better) Translates to: TGSQAVQIVAEVGDS*CQLVHRDLEEGVLL Trigger: GAGGAGGACCCCTTCTTCAAGGTCCCTGTGAACAAGCTGGCAGCAGCTGTCTCCAACTTCGGCTACGATCTGTACCGCCTGAGATCCAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000000769.14 ENSMUST00000125982.2 ENSMUST00000137103.8 ENSMUST00000138661.8 |
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| CDS-3UTR CAA 90 bp | ACAGCAAGTGTTAGTAATTGTGTGTGGAGGTGCCCTCCGGGGACGGGGGCCCTCATGTCCTGCAGAGACTaGGTAAGTTCGCCTTCGAAG | + |
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Preference number: 5 (lower is better) Translates to: TASVSNCVWRCPPGTGALMSCRD*VSSPSK Trigger: CTTCGAAGGCGAACTTACCAAGTCTCTGCAGGACAT...GAGGGCCCCCGTCCCCGGAGGGCACCTCCACACACAATTACTAACACTTGCTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000769.14 |
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| CDS-3UTR CAA 90 bp | GGGGCAGGACGTTCCTCTTCCTCATCCACCTGCACTCCGAGAACAGGAAATGGTATTCTGGAAGCACTCTaGAGGTTCTTCTCAGGGGCA | + |
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Preference number: 5 (lower is better) Translates to: GAGRSSSSSTCTPRTGNGILEAL*RFFSGA Trigger: TGCCCCTGAGAAGAACCTCAAGAGTGCTTCCAGAAT...ACCATTTCCTGTTCTCGGAGTGCAGGTGGATGAGGAAGAGGAACGTCCTGCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000769.14 |
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| CDS-3UTR CAA 90 bp | ACACTGAAGCTACCGGCCGCCTTCCTGGAATGTATAATCAGCTTCCCTCTGGGGTGGGCAATCTTGCAGTaGAGATCAGAGTCCAAGCCG | + |
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Preference number: 5 (lower is better) Translates to: TLKLPAAFLECIISFPLGWAILQ*RSESKP Trigger: CGGCTTGGACTCTGATCTCAACTGCAAGATTGCCCA...CCCCAGAGGGAAGCTGATTATACATTCCAGGAAGGCGGCCGGTAGCTTCAGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000769.14 |
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| CDS-3UTR CAA 90 bp | GTTCCTCTTCCTCATCCACCTGCACTCCGAGAACAGGAAATGGTGACTTTGGCAACAGCTGCTGCCAGCTaGTTCACAGGGACCTTGAAG | + |
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Preference number: 5 (lower is better) Translates to: VPLPHPPALREQEMVTLATAAAS*FTGTLK Trigger: CTTCAAGGTCCCTGTGAACAAGCTGGCAGCAGCTGT...TGCCAAAGTCACCATTTCCTGTTCTCGGAGTGCAGGTGGATGAGGAAGAGGAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000769.14 |
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| CDS-3UTR CAA 90 bp | CTTCAGAAGCAGAGGCAGCTTTATGAGTTGGGGGACCAGCTGAGACTCTATAGATTGTTCACAGGGACCTaGAAGAAGGGGTCCTCCTCC | + |
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Preference number: 5 (lower is better) Translates to: LQKQRQLYELGDQLRLYRLFTGT*KKGSSS Trigger: GGAGGAGGACCCCTTCTTCAAGGTCCCTGTGAACAA...TCTATAGAGTCTCAGCTGGTCCCCCAACTCATAAAGCTGCCTCTGCTTCTGAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000125982.2 |
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| CDS-3UTR CAA 90 bp | CAGAAGCAGAGGCAGCTTTATGAGTTGGGGGACCAGCTGAGACTCTATAGACTTACAGCTGCTGCCAGCTaGTTCACAGGGACCTTGAAG | + |
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Preference number: 5 (lower is better) Translates to: QKQRQLYELGDQLRLYRLTAAAS*FTGTLK Trigger: CTTCAAGGTCCCTGTGAACAAGCTGGCAGCAGCTGT...AAGTCTATAGAGTCTCAGCTGGTCCCCCAACTCATAAAGCTGCCTCTGCTTCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000125982.2 |
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| CDS-3UTR CAA 90 bp | GCAGAGCTTAAGCAGAGCCCGTTCATGTTACAAGTATGTAAATTCATAAGGACCTTTCTCGAGTCAAACTaGGTTACCCACTGCCCCTTG | + |
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Preference number: 5 (lower is better) Translates to: AELKQSPFMLQVCKFIRTFLESN*VTHCPL Trigger: CAAGGGGCAGTGGGTAACCAAGTTTGACTCGAGAAA...GGTCCTTATGAATTTACATACTTGTAACATGAACGGGCTCTGCTTAAGCTCTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000769.14 |
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| CDS CCA 72 bp | GGGACTGGGGAGCCCTCAGAGCTGCTGGGGACGTTCTaGCTGCTGCCGTGCCCGAGCAGGGCTCCAGTCCAG | + |
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Preference number: 6 (lower is better) Translates to: GTGEPSELLGTF*LLPCPSRAPVQ Trigger: CTGGACTGGAGCCCTGCTCGGGCACGGCAGCAGCCAGAACGTCCCCAGCAGCTCTGAGGGCTCCCCAGTCCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000000769.14 ENSMUST00000125982.2 ENSMUST00000137103.8 ENSMUST00000138661.8 ENSMUST00000155009.2 |
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| CDS GCA 72 bp | CTGGGGAGCCCTCAGAGCTGCTGGGGACGTTCTGGCTaGTGCCGTGCCCGAGCAGGGCTCCAGTCCAGAGGA | + |
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Preference number: 6 (lower is better) Translates to: LGSPQSCWGRSG*CRARAGLQSRG Trigger: TCCTCTGGACTGGAGCCCTGCTCGGGCACGGCAGCAGCCAGAACGTCCCCAGCAGCTCTGAGGGCTCCCCAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000000769.14 ENSMUST00000125982.2 ENSMUST00000137103.8 ENSMUST00000138661.8 ENSMUST00000155009.2 |
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| CDS GCA 72 bp | CCCTCAGAGCTGCTGGGGACGTTCTGGCTGCTGCCGTaGCCGAGCAGGGCTCCAGTCCAGAGGAGTAGCACC | + |
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Preference number: 6 (lower is better) Translates to: PSELLGTFWLLP*PSRAPVQRSST Trigger: GGTGCTACTCCTCTGGACTGGAGCCCTGCTCGGGCACGGCAGCAGCCAGAACGTCCCCAGCAGCTCTGAGGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000000769.14 ENSMUST00000125982.2 ENSMUST00000137103.8 ENSMUST00000138661.8 ENSMUST00000155009.2 |
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| CDS TCA 72 bp | CTCCCAGAGAAAGGGCAGAGAGGGCCGTGGCCACGCTaGGTGGAGACAGCAGGACGTTGCCCGTTGGGCTGG | + |
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Preference number: 6 (lower is better) Translates to: LPEKGQRGPWPR*VETAGRCPLGW Trigger: CCAGCCCAACGGGCAACGTCCTGCTGTCTCCACTCAGCGTGGCCACGGCCCTCTCTGCCCTTTCTCTGGGAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000769.14 ENSMUST00000125982.2 ENSMUST00000137103.8 |
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| CDS CAA 72 bp | AGGGCCGTGGCCACGCTGAGTGGAGACAGCAGGACGTaGCCCGTTGGGCTGGCACTGGATCTCAGGCGGTAC | + |
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Preference number: 6 (lower is better) Translates to: RAVATLSGDSRT*PVGLALDLRRY Trigger: GTACCGCCTGAGATCCAGTGCCAGCCCAACGGGCAACGTCCTGCTGTCTCCACTCAGCGTGGCCACGGCCCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000000769.14 ENSMUST00000125982.2 ENSMUST00000137103.8 ENSMUST00000138661.8 |
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| CDS TCA 72 bp | GTTCCAGAGAAAGGGCAGAGAGGGCCGTGGCCACGCTaGGTGGAGACAGCAGGACGTTGCCCGTTGGGCTGG | + |
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Preference number: 6 (lower is better) Translates to: VPEKGQRGPWPR*VETAGRCPLGW Trigger: CCAGCCCAACGGGCAACGTCCTGCTGTCTCCACTCAGCGTGGCCACGGCCCTCTCTGCCCTTTCTCTGGAAC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138661.8 |
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| CDS GCA 72 bp | TTCTCAGAGCTGCTGGGGACGTTCTGGCTGCTGCCGTaGCCGAGCAGGGCTCCAGTCCAGAGGAGTAGCACC | + |
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Preference number: 6 (lower is better) Translates to: FSELLGTFWLLP*PSRAPVQRSST Trigger: GGTGCTACTCCTCTGGACTGGAGCCCTGCTCGGGCACGGCAGCAGCCAGAACGTCCCCAGCAGCTCTGAGAA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168902.8 |
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| CDS CCA 72 bp | CAGAGAAAGGGCAGAGAGGGCCGTGGCCACGCTGAGTaGAGACAGCAGGACGTTGCCCGTTGGGCTGGCACT | + |
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Preference number: 6 (lower is better) Translates to: QRKGREGRGHAE*RQQDVARWAGT Trigger: AGTGCCAGCCCAACGGGCAACGTCCTGCTGTCTCCACTCAGCGTGGCCACGGCCCTCTCTGCCCTTTCTCTG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000000769.14 ENSMUST00000125982.2 ENSMUST00000137103.8 ENSMUST00000138661.8 |
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| CDS GCA 72 bp | CGAAGTTCTCAGAGCTGCTGGGGACGTTCTGGCTGCTaGCGTGCCCGAGCAGGGCTCCAGTCCAGAGGAGTA | + |
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Preference number: 6 (lower is better) Translates to: RSSQSCWGRSGC*RARAGLQSRGV Trigger: TACTCCTCTGGACTGGAGCCCTGCTCGGGCACGGCAGCAGCCAGAACGTCCCCAGCAGCTCTGAGAACTTCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168902.8 |
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| CDS GCA 72 bp | ACTCGAAGTTCTCAGAGCTGCTGGGGACGTTCTGGCTaGTGCCGTGCCCGAGCAGGGCTCCAGTCCAGAGGA | + |
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Preference number: 6 (lower is better) Translates to: TRSSQSCWGRSG*CRARAGLQSRG Trigger: TCCTCTGGACTGGAGCCCTGCTCGGGCACGGCAGCAGCCAGAACGTCCCCAGCAGCTCTGAGAACTTCGAGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168902.8 |
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| CDS CCA 72 bp | TTTGACTCGAAGTTCTCAGAGCTGCTGGGGACGTTCTaGCTGCTGCCGTGCCCGAGCAGGGCTCCAGTCCAG | + |
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Preference number: 6 (lower is better) Translates to: FDSKFSELLGTF*LLPCPSRAPVQ Trigger: CTGGACTGGAGCCCTGCTCGGGCACGGCAGCAGCCAGAACGTCCCCAGCAGCTCTGAGAACTTCGAGTCAAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168902.8 |
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| CDS CAA 72 bp | TTGGAGACAGCTGCTGCCAGCTTGTTCACAGGGACCTaGAAGAAGGGGTCCTCCTCCTCCACGGGCTCGCCC | + |
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Preference number: 6 (lower is better) Translates to: LETAAASLFTGT*KKGSSSSTGSP Trigger: GGGCGAGCCCGTGGAGGAGGAGGACCCCTTCTTCAAGGTCCCTGTGAACAAGCTGGCAGCAGCTGTCTCCAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000000769.14 ENSMUST00000125982.2 ENSMUST00000137103.8 ENSMUST00000138661.8 ENSMUST00000155009.2 |
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| CDS CCA 72 bp | GTGGAGACAGCAGGACGTTGCCCGTTGGGCTGGCACTaGATCTCAGGCGGTACAGATCGTAGCCGAAGTTGG | + |
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Preference number: 6 (lower is better) Translates to: VETAGRCPLGWH*ISGGTDRSRSW Trigger: CCAACTTCGGCTACGATCTGTACCGCCTGAGATCCAGTGCCAGCCCAACGGGCAACGTCCTGCTGTCTCCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000000769.14 ENSMUST00000125982.2 ENSMUST00000137103.8 ENSMUST00000138661.8 |
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| CDS GCA 72 bp | GCAACAAAGCTGGATTTGACTCGAAGTTCTCAGAGCTaGTGGGGACGTTCTGGCTGCTGCCGTGCCCGAGCA | + |
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Preference number: 6 (lower is better) Translates to: ATKLDLTRSSQS*WGRSGCCRARA Trigger: TGCTCGGGCACGGCAGCAGCCAGAACGTCCCCAGCAGCTCTGAGAACTTCGAGTCAAATCCAGCTTTGTTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168902.8 |
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| CDS TCA 72 bp | CCTTTCATCTGGGCCTGCACCCAGTTGTTAATCTCCTaGAGGTCTACTCGAGGGTTGCCCGTGAGGATCCGG | + |
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Preference number: 6 (lower is better) Translates to: PFIWACTQLLIS*RSTRGLPVRIR Trigger: CCGGATCCTCACGGGCAACCCTCGAGTAGACCTTCAGGAGATTAACAACTGGGTGCAGGCCCAGATGAAAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000000769.14 ENSMUST00000137103.8 ENSMUST00000138661.8 ENSMUST00000167281.8 |
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| CDS GCA 72 bp | GCGGTACAGATCGTAGCCGAAGTTGGAGACAGCTGCTaGCAGCTTGTTCACAGGGACCTTGAAGAAGGGGTC | + |
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Preference number: 6 (lower is better) Translates to: AVQIVAEVGDSC*QLVHRDLEEGV Trigger: GACCCCTTCTTCAAGGTCCCTGTGAACAAGCTGGCAGCAGCTGTCTCCAACTTCGGCTACGATCTGTACCGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000000769.14 ENSMUST00000125982.2 ENSMUST00000137103.8 ENSMUST00000138661.8 |
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| CDS GCA 72 bp | CAGGCGGTACAGATCGTAGCCGAAGTTGGAGACAGCTaGTGCCAGCTTGTTCACAGGGACCTTGAAGAAGGG | + |
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Preference number: 6 (lower is better) Translates to: QAVQIVAEVGDS*CQLVHRDLEEG Trigger: CCCTTCTTCAAGGTCCCTGTGAACAAGCTGGCAGCAGCTGTCTCCAACTTCGGCTACGATCTGTACCGCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000000769.14 ENSMUST00000125982.2 ENSMUST00000137103.8 ENSMUST00000138661.8 |
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| CDS CCA 72 bp | CACTGGATCTCAGGCGGTACAGATCGTAGCCGAAGTTaGAGACAGCTGCTGCCAGCTTGTTCACAGGGACCT | + |
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Preference number: 6 (lower is better) Translates to: HWISGGTDRSRS*RQLLPACSQGP Trigger: AGGTCCCTGTGAACAAGCTGGCAGCAGCTGTCTCCAACTTCGGCTACGATCTGTACCGCCTGAGATCCAGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000000769.14 ENSMUST00000125982.2 ENSMUST00000137103.8 ENSMUST00000138661.8 |
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