Pregenerated sensors for SERPINE2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026249Ensembl transcript IDs: ENSMUST00000027467.11, ENSMUST00000189793.7, ENSMUST00000190724.2
Found 86 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ATGCCAATCCAAAGAGTACAGACCAGTAGTGACAGGTACGCGGCTTaGCAGCAAATGGTGTCCAGCGAGACGTTAGTTTTCCAACTTTAT | + |
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Preference number: 1 (lower is better) Translates to: MPIQRVQTSSDRYAA*QQMVSSETLVFQLY Trigger: ATAAAGTTGGAAAACTAACGTCTCGCTGGACACCATTTGCTGTCAAGCCGCGTACCTGTCACTACTGGTCTGTACTCTTTGGATTGGCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027467.11 |
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| 3UTR-3UTR TCA 90 bp | ACGAAGAGGCTACGGCTTTTGCTAGCTCCATCCCTTGCCACCCTCAAGCCTTTGTCCAGCCCTTTCTTCTaGCACAGCCCCGACCAGAAA | + |
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Preference number: 2 (lower is better) Translates to: TKRLRLLLAPSLATLKPLSSPFF*HSPDQK Trigger: TTTCTGGTCGGGGCTGTGTCAGAAGAAAGGGCTGGA...CAAAGGCTTGAGGGTGGCAAGGGATGGAGCTAGCAAAAGCCGTAGCCTCTTCGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027467.11 |
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| 3UTR-3UTR CCA 90 bp | TACAGACCAGTAGTGACAGGTACGCGGCTTGACAGCAAATGGTGTCCAGCGAGACGTCTTGGCTTTGCGTaGCTTTCCTTTGTCTGTCCT | + |
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Preference number: 2 (lower is better) Translates to: YRPVVTGTRLDSKWCPARRLGFA*LSFVCP Trigger: AGGACAGACAAAGGAAAGCCACGCAAAGCCAAGACG...TCTCGCTGGACACCATTTGCTGTCAAGCCGCGTACCTGTCACTACTGGTCTGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027467.11 |
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| 3UTR-3UTR GCA 90 bp | TACAGACCAGTAGTGACAGGTACGCGGCTTGACAGCAAATGGTGTCCAGCGAGAAAGTCGTCTTGGCTTTaGGTGGCTTTCCTTTGTCTG | + |
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Preference number: 2 (lower is better) Translates to: YRPVVTGTRLDSKWCPARKSSWL*VAFLCL Trigger: CAGACAAAGGAAAGCCACGCAAAGCCAAGACGACTT...TCTCGCTGGACACCATTTGCTGTCAAGCCGCGTACCTGTCACTACTGGTCTGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027467.11 |
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| 3UTR TCA 72 bp | AGGCATCCAGCATCCCAGGCATCCAGCCCTTTCTTCTaGCACAGCCCCGACCAGAAACACTTGCGTCACTTA | + |
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Preference number: 3 (lower is better) Translates to: RHPASQASSPFF*HSPDQKHLRHL Trigger: TAAGTGACGCAAGTGTTTCTGGTCGGGGCTGTGTCAGAAGAAAGGGCTGGATGCCTGGGATGCTGGATGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027467.11 |
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| 3UTR TCA 72 bp | AATCCTCTCCTGGAAAGTCACACATATCAACAGGAATaGAACAAAGATGCTGAACTTGACAGACAGCAAATA | + |
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Preference number: 3 (lower is better) Translates to: NPLLESHTYQQE*NKDAELDRQQI Trigger: TATTTGCTGTCTGTCAAGTTCAGCATCTTTGTTTCATTCCTGTTGATATGTGTGACTTTCCAGGAGAGGATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027467.11 |
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| CDS-3UTR TCA 90 bp | CTCATCCTTCACTACAGCATCCCAGGCATCCAGCATCCCAGGCATCCAGCATCCGGGCGATCAGCATGCTaGTGCTCTCACCATGGTAGG | + |
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Preference number: 4 (lower is better) Translates to: LILHYSIPGIQHPRHPASGRSAC*CSHHGR Trigger: CCTACCATGGTGAGAGCATCAGCATGCTGATCGCCC...GGATGCTGGATGCCTGGGATGCTGGATGCCTGGGATGCTGTAGTGAAGGATGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027467.11 |
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| CDS-3UTR CCA 90 bp | CTCATCCTTCACTACAGCATCCCAGGCATCCAGCATCCCAGGCATCCAGCATCCGGCCCAGGAACAAGATaGCACCTGTGGGATTGTGTC | + |
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Preference number: 4 (lower is better) Translates to: LILHYSIPGIQHPRHPASGPGTR*HLWDCV Trigger: GACACAATCCCACAGGTGCCATCTTGTTCCTGGGCC...GGATGCTGGATGCCTGGGATGCTGGATGCCTGGGATGCTGTAGTGAAGGATGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027467.11 |
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| CDS-3UTR CCA 90 bp | CTCATCCTTCACTACAGCATCCCAGGCATCCAGCATCCCAGGCATCCAGCATCCGCAGAGGCTGGGTCCTaGAAGTTCACATTCTGCACT | + |
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Preference number: 4 (lower is better) Translates to: LILHYSIPGIQHPRHPASAEAGS*KFTFCT Trigger: AGTGCAGAATGTGAACTTCCAGGACCCAGCCTCTGC...GGATGCTGGATGCCTGGGATGCTGGATGCCTGGGATGCTGTAGTGAAGGATGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027467.11 |
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| CDS-3UTR CCA 90 bp | GAAAGATGTGGGGAGGGAGTCTCTCTTCAGAGCCAAGTCGTCTTGGCTTTGCGTGGTGGAGCTCTCTGTTaGCAGGGCGATCAGCATGCT | + |
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Preference number: 4 (lower is better) Translates to: ERCGEGVSLQSQVVLALRGGALC*QGDQHA Trigger: AGCATGCTGATCGCCCTGCCAACAGAGAGCTCCACC...ACGCAAAGCCAAGACGACTTGGCTCTGAAGAGAGACTCCCTCCCCACATCTTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027467.11 |
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| CDS-3UTR CCA 90 bp | GAAAGATGTGGGGAGGGAGTCTCTCTTCAGAGCCAAGTCGTCTTGGCTTTGCGTCCTGGATCCCTGTGTTaGAGCCTAGTTCCTCCAGTG | + |
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Preference number: 4 (lower is better) Translates to: ERCGEGVSLQSQVVLALRPGSLC*SLVPPV Trigger: CACTGGAGGAACTAGGCTCCAACACAGGGATCCAGG...ACGCAAAGCCAAGACGACTTGGCTCTGAAGAGAGACTCCCTCCCCACATCTTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027467.11 |
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| CDS-3UTR CCA 90 bp | TGCCAATCCAAAGAGTACAGACCAGTAGTGACAGGTACGCGGCTTGACAGCAAATGGCAGACAGTGGGGTaGAGCTCTCTGTTGGCAGGG | + |
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Preference number: 4 (lower is better) Translates to: CQSKEYRPVVTGTRLDSKWQTVG*SSLLAG Trigger: CCCTGCCAACAGAGAGCTCCACCCCACTGTCTGCCA...TTTGCTGTCAAGCCGCGTACCTGTCACTACTGGTCTGTACTCTTTGGATTGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027467.11 |
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| CDS-3UTR CCA 90 bp | TACAGACCAGTAGTGACAGGTACGCGGCTTGACAGCAAATGGTGTCCAGCGAGAGATGATGGCAGACAGTaGGGTGGAGCTCTCTGTTGG | + |
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Preference number: 4 (lower is better) Translates to: YRPVVTGTRLDSKWCPARDDGRQ*GGALCW Trigger: CCAACAGAGAGCTCCACCCCACTGTCTGCCATCATC...TCTCGCTGGACACCATTTGCTGTCAAGCCGCGTACCTGTCACTACTGGTCTGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027467.11 |
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| CDS-3UTR CCA 90 bp | CAACACACGAAGAGGCTACGGCTTTTGCTAGCTCCATCCCTTGCCACCCTCAAGCCAGCTGCATCCTCTTaGGTACCATGGTGTTCATCC | + |
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Preference number: 4 (lower is better) Translates to: QHTKRLRLLLAPSLATLKPAASS*VPWCSS Trigger: GGATGAACACCATGGTACCCAAGAGGATGCAGCTGG...CTTGAGGGTGGCAAGGGATGGAGCTAGCAAAAGCCGTAGCCTCTTCGTGTGTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027467.11 |
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| 3UTR CAA 72 bp | CAGCAACAGAAACAACACACGAAGAGGCTACGGCTTTaGCTAGCTCCATCCCTTGCCACCCTCAAGCCTTTG | + |
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Preference number: 4 (lower is better) Translates to: QQQKQHTKRLRL*LAPSLATLKPL Trigger: CAAAGGCTTGAGGGTGGCAAGGGATGGAGCTAGCAAAAGCCGTAGCCTCTTCGTGTGTTGTTTCTGTTGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027467.11 |
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| CDS-3UTR TCA 90 bp | TGCCAATCCAAAGAGTACAGACCAGTAGTGACAGGTACGCGGCTTGACAGCAAACGGAACACAGAGAGCTaGGCCAACATGGGTACTTGG | + |
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Preference number: 4 (lower is better) Translates to: CQSKEYRPVVTGTRLDSKRNTES*ANMGTW Trigger: CCAAGTACCCATGTTGGCTCAGCTCTCTGTGTTCCG...TTTGCTGTCAAGCCGCGTACCTGTCACTACTGGTCTGTACTCTTTGGATTGGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027467.11 |
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| CDS-3UTR TCA 90 bp | CAACACACGAAGAGGCTACGGCTTTTGCTAGCTCCATCCCTTGCCACCCTCAAGGGTAGGGCAGCTCAATaGAGTTGTACCATAAGCCAT | + |
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Preference number: 4 (lower is better) Translates to: QHTKRLRLLLAPSLATLKGRAAQ*SCTISH Trigger: ATGGCTTATGGTACAACTTCATTGAGCTGCCCTACC...CTTGAGGGTGGCAAGGGATGGAGCTAGCAAAAGCCGTAGCCTCTTCGTGTGTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027467.11 |
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| CDS-3UTR TCA 90 bp | TACAGACCAGTAGTGACAGGTACGCGGCTTGACAGCAAATGGTGTCCAGCGAGAGTCTTGGTAGTGATGTaGGGGATGATGGCAGACAGT | + |
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Preference number: 4 (lower is better) Translates to: YRPVVTGTRLDSKWCPARVLVVM*GMMADS Trigger: ACTGTCTGCCATCATCCCTCACATCACTACCAAGAC...TCTCGCTGGACACCATTTGCTGTCAAGCCGCGTACCTGTCACTACTGGTCTGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027467.11 |
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| CDS-3UTR GCA 90 bp | CTCATCCTTCACTACAGCATCCCAGGCATCCAGCATCCCAGGCATCCAGCATCCATGTCCGTTTCTTTGTaGTCTCTGGTTGAAACCGAG | + |
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Preference number: 4 (lower is better) Translates to: LILHYSIPGIQHPRHPASMSVSL*SLVETE Trigger: CTCGGTTTCAACCAGAGAGCACAAAGAAACGGACAT...GGATGCTGGATGCCTGGGATGCTGGATGCCTGGGATGCTGTAGTGAAGGATGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027467.11 |
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| CDS-3UTR CCA 90 bp | ACGAAGAGGCTACGGCTTTTGCTAGCTCCATCCCTTGCCACCCTCAAGCCTTTGAGAGCTGAGCCAACATaGGTACTTGGTAGGATTTCC | + |
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Preference number: 4 (lower is better) Translates to: TKRLRLLLAPSLATLKPLRAEPT*VLGRIS Trigger: GGAAATCCTACCAAGTACCCATGTTGGCTCAGCTCT...CAAAGGCTTGAGGGTGGCAAGGGATGGAGCTAGCAAAAGCCGTAGCCTCTTCGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027467.11 |
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| CDS-3UTR CCA 90 bp | CTCATCCTTCACTACAGCATCCCAGGCATCCAGCATCCCAGGCATCCAGCATCCTCCTCTTGGGTACCATaGTGTTCATCCAGCTATCAA | + |
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Preference number: 4 (lower is better) Translates to: LILHYSIPGIQHPRHPASSSWVP*CSSSYQ Trigger: TTGATAGCTGGATGAACACCATGGTACCCAAGAGGA...GGATGCTGGATGCCTGGGATGCTGGATGCCTGGGATGCTGTAGTGAAGGATGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027467.11 |
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| CDS-3UTR CCA 90 bp | CAACACACGAAGAGGCTACGGCTTTTGCTAGCTCCATCCCTTGCCACCCTCAAGACAAGATGGCACCTGTaGGATTGTGTCGGATGGAAA | + |
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Preference number: 4 (lower is better) Translates to: QHTKRLRLLLAPSLATLKTRWHL*DCVGWK Trigger: TTTCCATCCGACACAATCCCACAGGTGCCATCTTGT...CTTGAGGGTGGCAAGGGATGGAGCTAGCAAAAGCCGTAGCCTCTTCGTGTGTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027467.11 |
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| CDS-3UTR GCA 90 bp | CAACACACGAAGAGGCTACGGCTTTTGCTAGCTCCATCCCTTGCCACCCTCAAGACCCTTGAAATACACTaGATTAACGAGGACCAGCCT | + |
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Preference number: 4 (lower is better) Translates to: QHTKRLRLLLAPSLATLKTLEIH*INEDQP Trigger: AGGCTGGTCCTCGTTAATGCAGTGTATTTCAAGGGT...CTTGAGGGTGGCAAGGGATGGAGCTAGCAAAAGCCGTAGCCTCTTCGTGTGTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027467.11 |
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| CDS-3UTR GCA 90 bp | GAAAGATGTGGGGAGGGAGTCTCTCTTCAGAGCCAAGTCGTCTTGGCTTTGCGTGGATTTCCCATCACCTaGCACGAATGTCCGTTTCTT | + |
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Preference number: 4 (lower is better) Translates to: ERCGEGVSLQSQVVLALRGFPIT*HECPFL Trigger: AAGAAACGGACATTCGTGGCAGGTGATGGGAAATCC...ACGCAAAGCCAAGACGACTTGGCTCTGAAGAGAGACTCCCTCCCCACATCTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027467.11 |
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| CDS-3UTR GCA 90 bp | ACGAAGAGGCTACGGCTTTTGCTAGCTCCATCCCTTGCCACCCTCAAGCCTTTGGAGTTGAACTGGGAGTaGACAGAGTATAAAGTCACT | + |
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Preference number: 4 (lower is better) Translates to: TKRLRLLLAPSLATLKPLELNWE*TEYKVT Trigger: AGTGACTTTATACTCTGTGCACTCCCAGTTCAACTC...CAAAGGCTTGAGGGTGGCAAGGGATGGAGCTAGCAAAAGCCGTAGCCTCTTCGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027467.11 |
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| CDS-3UTR CCA 90 bp | TACAGACCAGTAGTGACAGGTACGCGGCTTGACAGCAAATGGTGTCCAGCGAGATATATCGCATCACCGTaGAGAGCTGCTTCTTTGTCT | + |
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Preference number: 4 (lower is better) Translates to: YRPVVTGTRLDSKWCPARYIASP*RAASLS Trigger: AGACAAAGAAGCAGCTCTCCACGGTGATGCGATATA...TCTCGCTGGACACCATTTGCTGTCAAGCCGCGTACCTGTCACTACTGGTCTGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027467.11 |
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| CDS-3UTR CCA 90 bp | TGCCAATCCAAAGAGTACAGACCAGTAGTGACAGGTACGCGGCTTGACAGCAAAGCCAAGGGCTTTCAGTaGCTCCTTCAGATCTGTTTG | + |
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Preference number: 4 (lower is better) Translates to: CQSKEYRPVVTGTRLDSKAKGFQ*LLQICL Trigger: CAAACAGATCTGAAGGAGCCACTGAAAGCCCTTGGC...TTTGCTGTCAAGCCGCGTACCTGTCACTACTGGTCTGTACTCTTTGGATTGGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027467.11 |
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| CDS-3UTR TCA 90 bp | ACGAAGAGGCTACGGCTTTTGCTAGCTCCATCCCTTGCCACCCTCAAGCCTTTGTTCTGCACTTCACACTaGAACACATCTTTGTTCCTT | + |
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Preference number: 4 (lower is better) Translates to: TKRLRLLLAPSLATLKPLFCTSH*NTSLFL Trigger: AAGGAACAAAGATGTGTTTCAGTGTGAAGTGCAGAA...CAAAGGCTTGAGGGTGGCAAGGGATGGAGCTAGCAAAAGCCGTAGCCTCTTCGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027467.11 |
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| CDS-3UTR CCA 90 bp | TACAGACCAGTAGTGACAGGTACGCGGCTTGACAGCAAATGGTGTCCAGCGAGAGACAGAGAGTTGAACTaGGAGTGCACAGAGTATAAA | + |
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Preference number: 4 (lower is better) Translates to: YRPVVTGTRLDSKWCPARDRELN*ECTEYK Trigger: TTTATACTCTGTGCACTCCCAGTTCAACTCTCTGTC...TCTCGCTGGACACCATTTGCTGTCAAGCCGCGTACCTGTCACTACTGGTCTGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027467.11 |
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| CDS-3UTR TCA 90 bp | AAAGATGCTGAACTTGACAGACAGCAAATACTCGAGAGGGTTGTTAACCTAGATTTTGTGCCACAGCTGTaGACTTGGGTAGGACCAGCT | + |
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Preference number: 4 (lower is better) Translates to: KDAELDRQQILERVVNLDFVPQL*TWVGPA Trigger: AGCTGGTCCTACCCAAGTTCACAGCTGTGGCACAAA...ATCTAGGTTAACAACCCTCTCGAGTATTTGCTGTCTGTCAAGTTCAGCATCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027467.11 |
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| CDS-3UTR CCA 90 bp | AAAGATGCTGAACTTGACAGACAGCAAATACTCGAGAGGGTTGTTAACCTAGATTGGGATTGTGTCGGATaGAAAACAGGAAAGGCCTGT | + |
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Preference number: 4 (lower is better) Translates to: KDAELDRQQILERVVNLDWDCVG*KTGKAC Trigger: ACAGGCCTTTCCTGTTTTCCATCCGACACAATCCCA...ATCTAGGTTAACAACCCTCTCGAGTATTTGCTGTCTGTCAAGTTCAGCATCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027467.11 |
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| CDS-3UTR CCA 90 bp | AAAGATGCTGAACTTGACAGACAGCAAATACTCGAGAGGGTTGTTAACCTAGATACCATCGATCAGATTTaGGGAAAGCAGATTATCAAT | + |
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Preference number: 4 (lower is better) Translates to: KDAELDRQQILERVVNLDTIDQI*GKQIIN Trigger: ATTGATAATCTGCTTTCCCCAAATCTGATCGATGGT...ATCTAGGTTAACAACCCTCTCGAGTATTTGCTGTCTGTCAAGTTCAGCATCTTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027467.11 |
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| CDS-3UTR CAA 90 bp | CTCATCCTTCACTACAGCATCCCAGGCATCCAGCATCCCAGGCATCCAGCATCCGGGTGGAGCTCTCTGTaGGCAGGGCGATCAGCATGC | + |
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Preference number: 5 (lower is better) Translates to: LILHYSIPGIQHPRHPASGWSSL*AGRSAC Trigger: GCATGCTGATCGCCCTGCCAACAGAGAGCTCCACCC...GGATGCTGGATGCCTGGGATGCTGGATGCCTGGGATGCTGTAGTGAAGGATGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027467.11 |
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| CDS GCA 90 bp | ATCACCGTGGAGAGCTGCTTCTTTGTCTTGCCGTCAGCCCCGAGCTaGAGCATGCCCAAGATGGACGCGATCCCATGTGGGGAGACAACA | + |
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Preference number: 5 (lower is better) Translates to: ITVESCFFVLPSAPS*SMPKMDAIPCGETT Trigger: TGTTGTCTCCCCACATGGGATCGCGTCCATCTTGGGCATGCTGCAGCTCGGGGCTGACGGCAAGACAAAGAAGCAGCTCTCCACGGTGAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027467.11 ENSMUST00000190724.2 |
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| CDS GCA 90 bp | TGGAGAGCTGCTTCTTTGTCTTGCCGTCAGCCCCGAGCTGCAGCATaGCCAAGATGGACGCGATCCCATGTGGGGAGACAACAACGTTCT | + |
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Preference number: 5 (lower is better) Translates to: WRAASLSCRQPRAAA*PRWTRSHVGRQQRS Trigger: AGAACGTTGTTGTCTCCCCACATGGGATCGCGTCCATCTTGGGCATGCTGCAGCTCGGGGCTGACGGCAAGACAAAGAAGCAGCTCTCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027467.11 ENSMUST00000190724.2 |
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| CDS CCA 90 bp | AGTGATGTGAGGGATGATGGCAGACAGTGGGGTGGAGCTCTCTGTTaGCAGGGCGATCAGCATGCTGATGCTCTCACCATGGTAGGGCAG | + |
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Preference number: 5 (lower is better) Translates to: SDVRDDGRQWGGALC*QGDQHADALTMVGQ Trigger: CTGCCCTACCATGGTGAGAGCATCAGCATGCTGATCGCCCTGCCAACAGAGAGCTCCACCCCACTGTCTGCCATCATCCCTCACATCACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027467.11 ENSMUST00000189793.7 |
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| CDS-3UTR CAA 90 bp | ACGAAGAGGCTACGGCTTTTGCTAGCTCCATCCCTTGCCACCCTCAAGCCTTTGAGCTGCTTCTTTGTCTaGCCGTCAGCCCCGAGCTGC | + |
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Preference number: 5 (lower is better) Translates to: TKRLRLLLAPSLATLKPLSCFFV*PSAPSC Trigger: GCAGCTCGGGGCTGACGGCAAGACAAAGAAGCAGCT...CAAAGGCTTGAGGGTGGCAAGGGATGGAGCTAGCAAAAGCCGTAGCCTCTTCGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027467.11 |
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| CDS GCA 90 bp | CGTTTACATTATATCGCATCACCGTGGAGAGCTGCTTCTTTGTCTTaGCGTCAGCCCCGAGCTGCAGCATGCCCAAGATGGACGCGATCC | + |
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Preference number: 5 (lower is better) Translates to: RLHYIASPWRAASLS*RQPRAAACPRWTRS Trigger: GGATCGCGTCCATCTTGGGCATGCTGCAGCTCGGGGCTGACGGCAAGACAAAGAAGCAGCTCTCCACGGTGATGCGATATAATGTAAACG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027467.11 ENSMUST00000190724.2 |
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| CDS TCA 90 bp | GGACGCGATCCCATGTGGGGAGACAACAACGTTCTCATGAGGCCGTaGCTTGATGATCTGATTGAAGACCTGGATCCCTGTGTTGGAGCC | + |
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Preference number: 5 (lower is better) Translates to: GRDPMWGDNNVLMRP*LDDLIEDLDPCVGA Trigger: GGCTCCAACACAGGGATCCAGGTCTTCAATCAGATCATCAAGTCACGGCCTCATGAGAACGTTGTTGTCTCCCCACATGGGATCGCGTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027467.11 ENSMUST00000190724.2 |
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| CDS CCA 90 bp | GCTATCAATGGTCTTGGTAGTGATGTGAGGGATGATGGCAGACAGTaGGGTGGAGCTCTCTGTTGGCAGGGCGATCAGCATGCTGATGCT | + |
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Preference number: 5 (lower is better) Translates to: AINGLGSDVRDDGRQ*GGALCWQGDQHADA Trigger: AGCATCAGCATGCTGATCGCCCTGCCAACAGAGAGCTCCACCCCACTGTCTGCCATCATCCCTCACATCACTACCAAGACCATTGATAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027467.11 ENSMUST00000189793.7 |
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| CDS-3UTR CAA 90 bp | CTCATCCTTCACTACAGCATCCCAGGCATCCAGCATCCCAGGCATCCAGCATCCAGCCAACATGGGTACTaGGTAGGATTTCCCATCACC | + |
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Preference number: 5 (lower is better) Translates to: LILHYSIPGIQHPRHPASSQHGY*VGFPIT Trigger: GGTGATGGGAAATCCTACCAAGTACCCATGTTGGCT...GGATGCTGGATGCCTGGGATGCTGGATGCCTGGGATGCTGTAGTGAAGGATGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027467.11 |
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| CDS TCA 90 bp | GGTACCATGGTGTTCATCCAGCTATCAATGGTCTTGGTAGTGATGTaGGGGATGATGGCAGACAGTGGGGTGGAGCTCTCTGTTGGCAGG | + |
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Preference number: 5 (lower is better) Translates to: GTMVFIQLSMVLVVM*GMMADSGVELSVGR Trigger: CCTGCCAACAGAGAGCTCCACCCCACTGTCTGCCATCATCCCTCACATCACTACCAAGACCATTGATAGCTGGATGAACACCATGGTACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027467.11 ENSMUST00000189793.7 |
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| CDS-3UTR CAA 90 bp | CAACACACGAAGAGGCTACGGCTTTTGCTAGCTCCATCCCTTGCCACCCTCAAGGGCAGCTCAATGAAGTaGTACCATAAGCCATTCGGG | + |
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Preference number: 5 (lower is better) Translates to: QHTKRLRLLLAPSLATLKGSSMK*YHKPFG Trigger: CCCGAATGGCTTATGGTACAACTTCATTGAGCTGCC...CTTGAGGGTGGCAAGGGATGGAGCTAGCAAAAGCCGTAGCCTCTTCGTGTGTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027467.11 |
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| CDS-3UTR CAA 90 bp | TGCCAATCCAAAGAGTACAGACCAGTAGTGACAGGTACGCGGCTTGACAGCAAAGCCACAGCTGTGAACTaGGGTAGGACCAGCTGCATC | + |
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Preference number: 5 (lower is better) Translates to: CQSKEYRPVVTGTRLDSKATAVN*GRTSCI Trigger: GATGCAGCTGGTCCTACCCAAGTTCACAGCTGTGGC...TTTGCTGTCAAGCCGCGTACCTGTCACTACTGGTCTGTACTCTTTGGATTGGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027467.11 |
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| CDS-3UTR CAA 90 bp | CTCATCCTTCACTACAGCATCCCAGGCATCCAGCATCCCAGGCATCCAGCATCCTTAGGATTGCAGTTGTaGCTGCCGAAGCTTTGGTTC | + |
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Preference number: 5 (lower is better) Translates to: LILHYSIPGIQHPRHPASLGLQL*LPKLWF Trigger: GAACCAAAGCTTCGGCAGCAACAACTGCAATCCTAA...GGATGCTGGATGCCTGGGATGCTGGATGCCTGGGATGCTGTAGTGAAGGATGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027467.11 |
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| CDS-3UTR CAA 90 bp | ACGAAGAGGCTACGGCTTTTGCTAGCTCCATCCCTTGCCACCCTCAAGCCTTTGACCTTGCAATTAGGATaGCAGTTGTTGCTGCCGAAG | + |
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Preference number: 5 (lower is better) Translates to: TKRLRLLLAPSLATLKPLTLQLG*QLLLPK Trigger: CTTCGGCAGCAACAACTGCAATCCTAATTGCAAGGT...CAAAGGCTTGAGGGTGGCAAGGGATGGAGCTAGCAAAAGCCGTAGCCTCTTCGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027467.11 |
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| CDS-3UTR CAA 90 bp | GAAAGATGTGGGGAGGGAGTCTCTCTTCAGAGCCAAGTCGTCTTGGCTTTGCGTCGAATGTCCGTTTCTTaGTGCTCTCTGGTTGAAACC | + |
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Preference number: 5 (lower is better) Translates to: ERCGEGVSLQSQVVLALRRMSVS*CSLVET Trigger: GGTTTCAACCAGAGAGCACAAAGAAACGGACATTCG...ACGCAAAGCCAAGACGACTTGGCTCTGAAGAGAGACTCCCTCCCCACATCTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027467.11 |
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| CDS-3UTR CAA 90 bp | GAAAGATGTGGGGAGGGAGTCTCTCTTCAGAGCCAAGTCGTCTTGGCTTTGCGTCTCCTTCAGATCTGTTaGTGCCACAGCTGTGAACTT | + |
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Preference number: 5 (lower is better) Translates to: ERCGEGVSLQSQVVLALRLLQIC*CHSCEL Trigger: AAGTTCACAGCTGTGGCACAAACAGATCTGAAGGAG...ACGCAAAGCCAAGACGACTTGGCTCTGAAGAGAGACTCCCTCCCCACATCTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027467.11 |
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| CDS GCA 90 bp | AGAGAGCTGAGCCAACATGGGTACTTGGTAGGATTTCCCATCACCTaGCACGAATGTCCGTTTCTTTGTGCTCTCTGGTTGAAACCGAGA | + |
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Preference number: 5 (lower is better) Translates to: RELSQHGYLVGFPIT*HECPFLCALWLKPR Trigger: TCTCGGTTTCAACCAGAGAGCACAAAGAAACGGACATTCGTGGCAGGTGATGGGAAATCCTACCAAGTACCCATGTTGGCTCAGCTCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027467.11 ENSMUST00000189793.7 ENSMUST00000190724.2 |
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| CDS GCA 90 bp | TTCAGATCTGTTTGTGCCACAGCTGTGAACTTGGGTAGGACCAGCTaGATCCTCTTGGGTACCATGGTGTTCATCCAGCTATCAATGGTC | + |
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Preference number: 5 (lower is better) Translates to: FRSVCATAVNLGRTS*ILLGTMVFIQLSMV Trigger: GACCATTGATAGCTGGATGAACACCATGGTACCCAAGAGGATGCAGCTGGTCCTACCCAAGTTCACAGCTGTGGCACAAACAGATCTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027467.11 ENSMUST00000189793.7 |
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| CDS-3UTR CAA 90 bp | GAAAGATGTGGGGAGGGAGTCTCTCTTCAGAGCCAAGTCGTCTTGGCTTTGCGTTTTTTGACCCAAAAATaGATGGACTCAGAGGCAGAG | + |
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Preference number: 5 (lower is better) Translates to: ERCGEGVSLQSQVVLALRFLTQK*MDSEAE Trigger: CTCTGCCTCTGAGTCCATCAATTTTTGGGTCAAAAA...ACGCAAAGCCAAGACGACTTGGCTCTGAAGAGAGACTCCCTCCCCACATCTTTC 49% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000027467.11 |
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| CDS-3UTR CAA 90 bp | GAAAGATGTGGGGAGGGAGTCTCTCTTCAGAGCCAAGTCGTCTTGGCTTTGCGTGACTTCCACAAACCCTaGAAATACACTGCATTAACG | + |
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Preference number: 5 (lower is better) Translates to: ERCGEGVSLQSQVVLALRDFHKP*KYTALT Trigger: CGTTAATGCAGTGTATTTCAAGGGTTTGTGGAAGTC...ACGCAAAGCCAAGACGACTTGGCTCTGAAGAGAGACTCCCTCCCCACATCTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027467.11 |
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| CDS-3UTR CAA 90 bp | TGCCAATCCAAAGAGTACAGACCAGTAGTGACAGGTACGCGGCTTGACAGCAAACTTTGTGCTCTCTGGTaGAAACCGAGACTTCCACAA | + |
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Preference number: 5 (lower is better) Translates to: CQSKEYRPVVTGTRLDSKLCALW*KPRLPQ Trigger: TTGTGGAAGTCTCGGTTTCAACCAGAGAGCACAAAG...TTTGCTGTCAAGCCGCGTACCTGTCACTACTGGTCTGTACTCTTTGGATTGGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027467.11 |
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| CDS CCA 90 bp | TGCATTAACGAGGACCAGCCTGGTAAGGGCACCATCGATCAGATTTaGGGAAAGCAGATTATCAATCATGCCCCTGGTCTCATTTTTGAC | + |
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Preference number: 5 (lower is better) Translates to: CINEDQPGKGTIDQI*GKQIINHAPGLIFD Trigger: GTCAAAAATGAGACCAGGGGCATGATTGATAATCTGCTTTCCCCAAATCTGATCGATGGTGCCCTTACCAGGCTGGTCCTCGTTAATGCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027467.11 ENSMUST00000190724.2 |
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| CDS-3UTR CAA 90 bp | AAAGATGCTGAACTTGACAGACAGCAAATACTCGAGAGGGTTGTTAACCTAGATTGGAGAGCTGCTTCTTaGTCTTGCCGTCAGCCCCGA | + |
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Preference number: 5 (lower is better) Translates to: KDAELDRQQILERVVNLDWRAAS*SCRQPR Trigger: TCGGGGCTGACGGCAAGACAAAGAAGCAGCTCTCCA...ATCTAGGTTAACAACCCTCTCGAGTATTTGCTGTCTGTCAAGTTCAGCATCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027467.11 |
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| CDS TCA 90 bp | TTCCCATCACCTGCCACGAATGTCCGTTTCTTTGTGCTCTCTGGTTaGAACCGAGACTTCCACAAACCCTTGAAATACACTGCATTAACG | + |
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Preference number: 5 (lower is better) Translates to: FPSPATNVRFFVLSG*NRDFHKPLKYTALT Trigger: CGTTAATGCAGTGTATTTCAAGGGTTTGTGGAAGTCTCGGTTTCAACCAGAGAGCACAAAGAAACGGACATTCGTGGCAGGTGATGGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027467.11 ENSMUST00000189793.7 ENSMUST00000190724.2 |
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| CDS CCA 90 bp | GGATTTCCCATCACCTGCCACGAATGTCCGTTTCTTTGTGCTCTCTaGTTGAAACCGAGACTTCCACAAACCCTTGAAATACACTGCATT | + |
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Preference number: 5 (lower is better) Translates to: GFPITCHECPFLCAL*LKPRLPQTLEIHCI Trigger: AATGCAGTGTATTTCAAGGGTTTGTGGAAGTCTCGGTTTCAACCAGAGAGCACAAAGAAACGGACATTCGTGGCAGGTGATGGGAAATCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027467.11 ENSMUST00000189793.7 ENSMUST00000190724.2 |
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| CDS-3UTR CAA 90 bp | TGCCAATCCAAAGAGTACAGACCAGTAGTGACAGGTACGCGGCTTGACAGCAAATTGGAGACAATAGCCTaGTTGATCTTCTTCAGCACT | + |
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Preference number: 5 (lower is better) Translates to: CQSKEYRPVVTGTRLDSKLETIA*LIFFST Trigger: AGTGCTGAAGAAGATCAACAAGGCTATTGTCTCCAA...TTTGCTGTCAAGCCGCGTACCTGTCACTACTGGTCTGTACTCTTTGGATTGGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027467.11 |
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| CDS TCA 90 bp | GAGGCAGAGGCTGGGTCCTGGAAGTTCACATTCTGCACTTCACACTaGAACACATCTTTGTTCCTTACTGCAAAAGGCACTTCCATTTTA | + |
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Preference number: 5 (lower is better) Translates to: EAEAGSWKFTFCTSH*NTSLFLTAKGTSIL Trigger: TAAAATGGAAGTGCCTTTTGCAGTAAGGAACAAAGATGTGTTTCAGTGTGAAGTGCAGAATGTGAACTTCCAGGACCCAGCCTCTGCCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027467.11 ENSMUST00000190724.2 |
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| CDS CCA 90 bp | TGCATTAACGAGGACCAGCCTGGTAAGGGCACCATCGATCAGATTTaGGGAAAGCAGATTATCAATCATGCCGTTTACATTATATCGCAT | + |
|
Preference number: 5 (lower is better) Translates to: CINEDQPGKGTIDQI*GKQIINHAVYIISH Trigger: ATGCGATATAATGTAAACGGCATGATTGATAATCTGCTTTCCCCAAATCTGATCGATGGTGCCCTTACCAGGCTGGTCCTCGTTAATGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189793.7 |
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| CDS-3UTR CAA 90 bp | AAAGATGCTGAACTTGACAGACAGCAAATACTCGAGAGGGTTGTTAACCTAGATGTTGCTGCCGAAGCTTaGGTTCCATCTTCACTGACT | + |
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Preference number: 5 (lower is better) Translates to: KDAELDRQQILERVVNLDVAAEA*VPSSLT Trigger: AGTCAGTGAAGATGGAACCAAAGCTTCGGCAGCAAC...ATCTAGGTTAACAACCCTCTCGAGTATTTGCTGTCTGTCAAGTTCAGCATCTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027467.11 |
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| CDS GCA 72 bp | GAGAGCTGCTTCTTTGTCTTGCCGTCAGCCCCGAGCTaGAGCATGCCCAAGATGGACGCGATCCCATGTGGG | + |
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Preference number: 6 (lower is better) Translates to: ESCFFVLPSAPS*SMPKMDAIPCG Trigger: CCCACATGGGATCGCGTCCATCTTGGGCATGCTGCAGCTCGGGGCTGACGGCAAGACAAAGAAGCAGCTCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027467.11 ENSMUST00000190724.2 |
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| CDS CCA 72 bp | GGTCTTGGTAGTGATGTGAGGGATGATGGCAGACAGTaGGGTGGAGCTCTCTGTTGGCAGGGCGATCAGCAT | + |
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Preference number: 6 (lower is better) Translates to: GLGSDVRDDGRQ*GGALCWQGDQH Trigger: ATGCTGATCGCCCTGCCAACAGAGAGCTCCACCCCACTGTCTGCCATCATCCCTCACATCACTACCAAGACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027467.11 ENSMUST00000189793.7 |
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| CDS CAA 90 bp | CCGTTTACATTATATCGCATCACCGTGGAGAGCTGCTTCTTTGTCTaGCCGTCAGCCCCGAGCTGCAGCATGCCCAAGATGGACGCGATC | + |
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Preference number: 6 (lower is better) Translates to: PFTLYRITVESCFFV*PSAPSCSMPKMDAI Trigger: GATCGCGTCCATCTTGGGCATGCTGCAGCTCGGGGCTGACGGCAAGACAAAGAAGCAGCTCTCCACGGTGATGCGATATAATGTAAACGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027467.11 ENSMUST00000190724.2 |
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| CDS CAA 72 bp | TTATATCGCATCACCGTGGAGAGCTGCTTCTTTGTCTaGCCGTCAGCCCCGAGCTGCAGCATGCCCAAGATG | + |
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Preference number: 6 (lower is better) Translates to: LYRITVESCFFV*PSAPSCSMPKM Trigger: CATCTTGGGCATGCTGCAGCTCGGGGCTGACGGCAAGACAAAGAAGCAGCTCTCCACGGTGATGCGATATAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027467.11 ENSMUST00000190724.2 |
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| CDS CAA 90 bp | CAACTCCGTTTACATTATATCGCATCACCGTGGAGAGCTGCTTCTTaGTCTTGCCGTCAGCCCCGAGCTGCAGCATGCCCAAGATGGACG | + |
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Preference number: 6 (lower is better) Translates to: QLRLHYIASPWRAAS*SCRQPRAAACPRWT Trigger: CGTCCATCTTGGGCATGCTGCAGCTCGGGGCTGACGGCAAGACAAAGAAGCAGCTCTCCACGGTGATGCGATATAATGTAAACGGAGTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027467.11 ENSMUST00000190724.2 |
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| CDS CCA 72 bp | GCTTGTTCACCTGGCCCAGGAACAAGATGGCACCTGTaGGATTGTGTCGGATGGAAAACAGGAAAGGCCTGT | + |
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Preference number: 6 (lower is better) Translates to: ACSPGPGTRWHL*DCVGWKTGKAC Trigger: ACAGGCCTTTCCTGTTTTCCATCCGACACAATCCCACAGGTGCCATCTTGTTCCTGGGCCAGGTGAACAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027467.11 |
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| CDS CAA 72 bp | GGCTCCTTCAGATCTGTTTGTGCCACAGCTGTGAACTaGGGTAGGACCAGCTGCATCCTCTTGGGTACCATG | + |
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Preference number: 6 (lower is better) Translates to: GSFRSVCATAVN*GRTSCILLGTM Trigger: CATGGTACCCAAGAGGATGCAGCTGGTCCTACCCAAGTTCACAGCTGTGGCACAAACAGATCTGAAGGAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027467.11 ENSMUST00000189793.7 |
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| CDS GCA 72 bp | GTTTGTGCCACAGCTGTGAACTTGGGTAGGACCAGCTaGATCCTCTTGGGTACCATGGTGTTCATCCAGCTA | + |
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Preference number: 6 (lower is better) Translates to: VCATAVNLGRTS*ILLGTMVFIQL Trigger: TAGCTGGATGAACACCATGGTACCCAAGAGGATGCAGCTGGTCCTACCCAAGTTCACAGCTGTGGCACAAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027467.11 ENSMUST00000189793.7 |
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| CDS CCA 72 bp | GAGGACCAGCCTGGTAAGGGCACCATCGATCAGATTTaGGGAAAGCAGATTATCAATCATGCCCCTGGTCTC | + |
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Preference number: 6 (lower is better) Translates to: EDQPGKGTIDQI*GKQIINHAPGL Trigger: GAGACCAGGGGCATGATTGATAATCTGCTTTCCCCAAATCTGATCGATGGTGCCCTTACCAGGCTGGTCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027467.11 ENSMUST00000190724.2 |
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| CDS CAA 72 bp | TTCACCTGGCCCAGGAACAAGATGGCACCTGTGGGATaGTGTCGGATGGAAAACAGGAAAGGCCTGTCTACT | + |
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Preference number: 6 (lower is better) Translates to: FTWPRNKMAPVG*CRMENRKGLST Trigger: AGTAGACAGGCCTTTCCTGTTTTCCATCCGACACAATCCCACAGGTGCCATCTTGTTCCTGGGCCAGGTGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027467.11 |
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| CDS CAA 90 bp | GCTTTCAGTGGCTCCTTCAGATCTGTTTGTGCCACAGCTGTGAACTaGGGTAGGACCAGCTGCATCCTCTTGGGTACCATGGTGTTCATC | + |
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Preference number: 6 (lower is better) Translates to: AFSGSFRSVCATAVN*GRTSCILLGTMVFI Trigger: GATGAACACCATGGTACCCAAGAGGATGCAGCTGGTCCTACCCAAGTTCACAGCTGTGGCACAAACAGATCTGAAGGAGCCACTGAAAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027467.11 ENSMUST00000189793.7 |
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| CDS CAA 90 bp | CAGGGCTTGTTCACCTGGCCCAGGAACAAGATGGCACCTGTGGGATaGTGTCGGATGGAAAACAGGAAAGGCCTGTCTACTATAAACCAG | + |
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Preference number: 6 (lower is better) Translates to: QGLFTWPRNKMAPVG*CRMENRKGLSTINQ Trigger: CTGGTTTATAGTAGACAGGCCTTTCCTGTTTTCCATCCGACACAATCCCACAGGTGCCATCTTGTTCCTGGGCCAGGTGAACAAGCCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027467.11 |
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| CDS CAA 90 bp | GTTTGTGCCACAGCTGTGAACTTGGGTAGGACCAGCTGCATCCTCTaGGGTACCATGGTGTTCATCCAGCTATCAATGGTCTTGGTAGTG | + |
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Preference number: 6 (lower is better) Translates to: VCATAVNLGRTSCIL*GTMVFIQLSMVLVV Trigger: CACTACCAAGACCATTGATAGCTGGATGAACACCATGGTACCCAAGAGGATGCAGCTGGTCCTACCCAAGTTCACAGCTGTGGCACAAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027467.11 ENSMUST00000189793.7 |
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| CDS TCA 72 bp | CCCATGTGGGGAGACAACAACGTTCTCATGAGGCCGTaGCTTGATGATCTGATTGAAGACCTGGATCCCTGT | + |
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Preference number: 6 (lower is better) Translates to: PMWGDNNVLMRP*LDDLIEDLDPC Trigger: ACAGGGATCCAGGTCTTCAATCAGATCATCAAGTCACGGCCTCATGAGAACGTTGTTGTCTCCCCACATGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027467.11 ENSMUST00000190724.2 |
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| CDS CAA 72 bp | ACAGCTGTGAACTTGGGTAGGACCAGCTGCATCCTCTaGGGTACCATGGTGTTCATCCAGCTATCAATGGTC | + |
|
Preference number: 6 (lower is better) Translates to: TAVNLGRTSCIL*GTMVFIQLSMV Trigger: GACCATTGATAGCTGGATGAACACCATGGTACCCAAGAGGATGCAGCTGGTCCTACCCAAGTTCACAGCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027467.11 ENSMUST00000189793.7 |
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| CDS TCA 72 bp | CTGTGTTGGAGCCTAGTTCCTCCAGTGACAGAGAGTTaGACTGGGAGTGCACAGAGTATAAAGTCACTGTGG | + |
|
Preference number: 6 (lower is better) Translates to: LCWSLVPPVTES*TGSAQSIKSLW Trigger: CCACAGTGACTTTATACTCTGTGCACTCCCAGTTCAACTCTCTGTCACTGGAGGAACTAGGCTCCAACACAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027467.11 ENSMUST00000190724.2 |
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| CDS GCA 72 bp | AGCCAACATGGGTACTTGGTAGGATTTCCCATCACCTaGCACGAATGTCCGTTTCTTTGTGCTCTCTGGTTG | + |
|
Preference number: 6 (lower is better) Translates to: SQHGYLVGFPIT*HECPFLCALWL Trigger: CAACCAGAGAGCACAAAGAAACGGACATTCGTGGCAGGTGATGGGAAATCCTACCAAGTACCCATGTTGGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027467.11 ENSMUST00000189793.7 ENSMUST00000190724.2 |
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| CDS GCA 72 bp | ATTTCCCATCACCTGCCACGAATGTCCGTTTCTTTGTaGTCTCTGGTTGAAACCGAGACTTCCACAAACCCT | + |
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Preference number: 6 (lower is better) Translates to: ISHHLPRMSVSL*SLVETETSTNP Trigger: AGGGTTTGTGGAAGTCTCGGTTTCAACCAGAGAGCACAAAGAAACGGACATTCGTGGCAGGTGATGGGAAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027467.11 ENSMUST00000189793.7 ENSMUST00000190724.2 |
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| CDS CCA 72 bp | TTGGAGCCTAGTTCCTCCAGTGACAGAGAGTTGAACTaGGAGTGCACAGAGTATAAAGTCACTGTGGTCAAG | + |
|
Preference number: 6 (lower is better) Translates to: LEPSSSSDRELN*ECTEYKVTVVK Trigger: CTTGACCACAGTGACTTTATACTCTGTGCACTCCCAGTTCAACTCTCTGTCACTGGAGGAACTAGGCTCCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027467.11 ENSMUST00000190724.2 |
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| CDS CAA 72 bp | AGGATTTCCCATCACCTGCCACGAATGTCCGTTTCTTaGTGCTCTCTGGTTGAAACCGAGACTTCCACAAAC | + |
|
Preference number: 6 (lower is better) Translates to: RISHHLPRMSVS*CSLVETETSTN Trigger: GTTTGTGGAAGTCTCGGTTTCAACCAGAGAGCACAAAGAAACGGACATTCGTGGCAGGTGATGGGAAATCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027467.11 ENSMUST00000189793.7 ENSMUST00000190724.2 |
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| CDS TCA 72 bp | CCTGCCACGAATGTCCGTTTCTTTGTGCTCTCTGGTTaGAACCGAGACTTCCACAAACCCTTGAAATACACT | + |
|
Preference number: 6 (lower is better) Translates to: PATNVRFFVLSG*NRDFHKPLKYT Trigger: AGTGTATTTCAAGGGTTTGTGGAAGTCTCGGTTTCAACCAGAGAGCACAAAGAAACGGACATTCGTGGCAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027467.11 ENSMUST00000189793.7 ENSMUST00000190724.2 |
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| CDS CCA 72 bp | GAGGACCAGCCTGGTAAGGGCACCATCGATCAGATTTaGGGAAAGCAGATTATCAATCATGCCGTTTACATT | + |
|
Preference number: 6 (lower is better) Translates to: EDQPGKGTIDQI*GKQIINHAVYI Trigger: AATGTAAACGGCATGATTGATAATCTGCTTTCCCCAAATCTGATCGATGGTGCCCTTACCAGGCTGGTCCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189793.7 |
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| CDS CCA 72 bp | ATCACCTGCCACGAATGTCCGTTTCTTTGTGCTCTCTaGTTGAAACCGAGACTTCCACAAACCCTTGAAATA | + |
|
Preference number: 6 (lower is better) Translates to: ITCHECPFLCAL*LKPRLPQTLEI Trigger: TATTTCAAGGGTTTGTGGAAGTCTCGGTTTCAACCAGAGAGCACAAAGAAACGGACATTCGTGGCAGGTGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027467.11 ENSMUST00000189793.7 ENSMUST00000190724.2 |
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| CDS GCA 72 bp | CATCGATCAGATTTGGGGAAAGCAGATTATCAATCATaGCGTTTACATTATATCGCATCACCGTGGAGAGCT | + |
|
Preference number: 6 (lower is better) Translates to: HRSDLGKADYQS*RLHYIASPWRA Trigger: AGCTCTCCACGGTGATGCGATATAATGTAAACGGCATGATTGATAATCTGCTTTCCCCAAATCTGATCGATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189793.7 |
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| CDS CAA 90 bp | CTGAGAAACACAGCATTGGCCACGGTCACAATGTCTTTATTTTTCTaGGAGACAATAGCCTTGTTGATCTTCTTCAGCACTTTACCAACT | + |
|
Preference number: 6 (lower is better) Translates to: LRNTALATVTMSLFF*ETIALLIFFSTLPT Trigger: AGTTGGTAAAGTGCTGAAGAAGATCAACAAGGCTATTGTCTCCAAGAAAAATAAAGACATTGTGACCGTGGCCAATGCTGTGTTTCTCAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027467.11 ENSMUST00000190724.2 |
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