Pregenerated sensors for SERPINE1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037411Ensembl transcript IDs: ENSMUST00000041388.11, ENSMUST00000077523.4
Found 182 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GTCAAGGGAGGGAGCAGGGAGAAGGCTCGCTATTGGGCCACCATTTaGTCTGTCTATCCGTTGCCCCTTGGAGGTGGGCAAGGTGGACAT | + |
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Preference number: 1 (lower is better) Translates to: VKGGSREKARYWATI*SVYPLPLGGGQGGH Trigger: ATGTCCACCTTGCCCACCTCCAAGGGGCAACGGATAGACAGATCAAATGGTGGCCCAATAGCGAGCCTTCTCCCTGCTCCCTCCCTTGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
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| 3UTR CCA 90 bp | TTGCTGAATGAAAGTGTTGTGCCCTCCACTCTGCTGGGGCCTCGGTaGGAACTGGGTCCAAAGGGCATGCTGGGCAGATCCAGGTACTGT | + |
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Preference number: 1 (lower is better) Translates to: LLNESVVPSTLLGPR*ELGPKGMLGRSRYC Trigger: ACAGTACCTGGATCTGCCCAGCATGCCCTTTGGACCCAGTTCCCACCGAGGCCCCAGCAGAGTGGAGGGCACAACACTTTCATTCAGCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
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| 3UTR GCA 90 bp | GTGGGCAAGGTGGACATTTCCACAGTGGACCTTGAGATAGGACAGTaGTTTTTCCTTTGGCCCATGGCCACCCTCCACAGCAATGGCAGG | + |
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Preference number: 1 (lower is better) Translates to: VGKVDISTVDLEIGQ*FFLWPMATLHSNGR Trigger: CCTGCCATTGCTGTGGAGGGTGGCCATGGGCCAAAGGAAAAAGCACTGTCCTATCTCAAGGTCCACTGTGGAAATGTCCACCTTGCCCAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
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| 3UTR CCA 90 bp | GACATTTCCACAGTGGACCTTGAGATAGGACAGTGCTTTTTCCTTTaGCCCATGGCCACCCTCCACAGCAATGGCAGGCGATGCAAGAGG | + |
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Preference number: 1 (lower is better) Translates to: DISTVDLEIGQCFFL*PMATLHSNGRRCKR Trigger: CCTCTTGCATCGCCTGCCATTGCTGTGGAGGGTGGCCATGGGCCAAAGGAAAAAGCACTGTCCTATCTCAAGGTCCACTGTGGAAATGTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
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| 3UTR TCA 90 bp | AAGGGCATGCTGGGCAGATCCAGGTACTGTGAGTTCTATGGTCCATaGGACCTTTGTGGGGTAGGAATCCCTAGGGAGGAGGGAGTTAGA | + |
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Preference number: 1 (lower is better) Translates to: KGMLGRSRYCEFYGP*DLCGVGIPREEGVR Trigger: TCTAACTCCCTCCTCCCTAGGGATTCCTACCCCACAAAGGTCTCATGGACCATAGAACTCACAGTACCTGGATCTGCCCAGCATGCCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
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| 3UTR CCA 90 bp | TCAAGAGTCCGAGGTCTGGGATGCTGGTTGGAAAGATTACCAGTGTaGGGGGTAAGGAGGAGTTGCCTTCTCTTTCTCCCCATAGAGTCC | + |
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Preference number: 1 (lower is better) Translates to: SRVRGLGCWLERLPV*GVRRSCLLFLPIES Trigger: GGACTCTATGGGGAGAAAGAGAAGGCAACTCCTCCTTACCCCCCACACTGGTAATCTTTCCAACCAGCATCCCAGACCTCGGACTCTTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
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| 3UTR TCA 90 bp | CGTGTCCACTGCTCACATACAGCAGCCGGAAATGACACATTGAAGTaGGTCACCAGTGCAGCTCTGACTCACCCAGTAATTGGAGAAAGT | + |
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Preference number: 1 (lower is better) Translates to: RVHCSHTAAGNDTLK*VTSAALTHPVIGES Trigger: ACTTTCTCCAATTACTGGGTGAGTCAGAGCTGCACTGGTGACTCACTTCAATGTGTCATTTCCGGCTGCTGTATGTGAGCAGTGGACACG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
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| 3UTR CCA 90 bp | CACATTGAAGTGAGTCACCAGTGCAGCTCTGACTCACCCAGTAATTaGAGAAAGTTCTGTCCTGTTAGGTCACACAGCCCCTTTTCCCTC | + |
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Preference number: 1 (lower is better) Translates to: HIEVSHQCSSDSPSN*RKFCPVRSHSPFSL Trigger: GAGGGAAAAGGGGCTGTGTGACCTAACAGGACAGAACTTTCTCCAATTACTGGGTGAGTCAGAGCTGCACTGGTGACTCACTTCAATGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
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| 3UTR-3UTR CCA 90 bp | GCCACCCTCCACAGCAATGGCAGGCGATGCAAGAGGTGCCCACAGTGTGACTGGTGCCCTCCACTCTGCTaGGGCCTCGGTGGGAACTGG | + |
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Preference number: 2 (lower is better) Translates to: ATLHSNGRRCKRCPQCDWCPPLC*GLGGNW Trigger: CCAGTTCCCACCGAGGCCCCAGCAGAGTGGAGGGCA...CCAGTCACACTGTGGGCACCTCTTGCATCGCCTGCCATTGCTGTGGAGGGTGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
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| 3UTR-3UTR GCA 90 bp | GGGTGTGTTCGGCTGCCACTAGGCGGCAGTGTGAGCCCCATCACGAGGCTACCCAGCAATGGCAGGCGATaGAAGAGGTGCCCACAGTGT | + |
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Preference number: 2 (lower is better) Translates to: GCVRLPLGGSVSPITRLPSNGRR*KRCPQC Trigger: ACACTGTGGGCACCTCTTGCATCGCCTGCCATTGCT...GGGTAGCCTCGTGATGGGGCTCACACTGCCGCCTAGTGGCAGCCGAACACACCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041388.11 |
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| 3UTR-3UTR CCA 90 bp | GGGTGTGTTCGGCTGCCACTAGGCGGCAGTGTGAGCCCCATCACGAGGCTACCCAGAGGGGCAGGTTTGTaGAGTGATGCACCCCTGACA | + |
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Preference number: 2 (lower is better) Translates to: GCVRLPLGGSVSPITRLPRGAGL*SDAPLT Trigger: TGTCAGGGGTGCATCACTCCACAAACCTGCCCCTCT...GGGTAGCCTCGTGATGGGGCTCACACTGCCGCCTAGTGGCAGCCGAACACACCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000041388.11 |
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| 3UTR-3UTR CCA 90 bp | AGCAAGCTGTGTCAAGGGAGGGAGCAGGGAGAAGGCTCGCTATTGGGCCACCATCACCCTCCACAGCAATaGCAGGCGATGCAAGAGGTG | + |
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Preference number: 2 (lower is better) Translates to: SKLCQGREQGEGSLLGHHHPPQQ*QAMQEV Trigger: CACCTCTTGCATCGCCTGCCATTGCTGTGGAGGGTG...ATGGTGGCCCAATAGCGAGCCTTCTCCCTGCTCCCTCCCTTGACACAGCTTGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
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| 3UTR CAA 90 bp | TGTCAAGGGAGGGAGCAGGGAGAAGGCTCGCTATTGGGCCACCATTaGATCTGTCTATCCGTTGCCCCTTGGAGGTGGGCAAGGTGGACA | + |
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Preference number: 2 (lower is better) Translates to: CQGREQGEGSLLGHH*ICLSVAPWRWARWT Trigger: TGTCCACCTTGCCCACCTCCAAGGGGCAACGGATAGACAGATCAAATGGTGGCCCAATAGCGAGCCTTCTCCCTGCTCCCTCCCTTGACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
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| 3UTR-3UTR GCA 90 bp | AGGCTACCCAGAGGGGCAGGTTTGTGGAGTGATGCACCCCTGACATACAGGGATTGGGTCCAAAGGGCATaGTGGGCAGATCCAGGTACT | + |
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Preference number: 2 (lower is better) Translates to: RLPRGAGLWSDAPLTYRDWVQRA*WADPGT Trigger: AGTACCTGGATCTGCCCAGCATGCCCTTTGGACCCA...ATCCCTGTATGTCAGGGGTGCATCACTCCACAAACCTGCCCCTCTGGGTAGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041388.11 |
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| 3UTR-3UTR CCA 90 bp | AGGCGGCAGTGTGAGCCCCATCACGAGGCTACCCAGAGGGGCAGGTTTGTGGAGTGCCCACAGTGTGACTaGAACACAAACGATTTTGCT | + |
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Preference number: 2 (lower is better) Translates to: RRQCEPHHEATQRGRFVECPQCD*NTNDFA Trigger: AGCAAAATCGTTTGTGTTCCAGTCACACTGTGGGCA...CTCCACAAACCTGCCCCTCTGGGTAGCCTCGTGATGGGGCTCACACTGCCGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000041388.11 |
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| 3UTR-3UTR CCA 90 bp | ACGTGGGTTGCCAAGCATCACCTTGGCAAGGTCCCTAAGGAAAAGAGCCACGGGTGGAGGTGGGCAAGGTaGACATTTCCACAGTGGACC | + |
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Preference number: 2 (lower is better) Translates to: TWVAKHHLGKVPKEKSHGWRWAR*TFPQWT Trigger: GGTCCACTGTGGAAATGTCCACCTTGCCCACCTCCA...CCCGTGGCTCTTTTCCTTAGGGACCTTGCCAAGGTGATGCTTGGCAACCCACGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041388.11 |
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| 3UTR CAA 90 bp | GGCGATGCAAGAGGTGCCCACAGTGTGACTGGAACACAAACGATTTaGCTGAATGAAAGTGTTGTGCCCTCCACTCTGCTGGGGCCTCGG | + |
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Preference number: 2 (lower is better) Translates to: GDARGAHSVTGTQTI*LNESVVPSTLLGPR Trigger: CCGAGGCCCCAGCAGAGTGGAGGGCACAACACTTTCATTCAGCAAAATCGTTTGTGTTCCAGTCACACTGTGGGCACCTCTTGCATCGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
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| 3UTR CAA 90 bp | ATAAGCAAGCTGTGTCAAGGGAGGGAGCAGGGAGAAGGCTCGCTATaGGGCCACCATTTGATCTGTCTATCCGTTGCCCCTTGGAGGTGG | + |
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Preference number: 2 (lower is better) Translates to: ISKLCQGREQGEGSL*GHHLICLSVAPWRW Trigger: CCACCTCCAAGGGGCAACGGATAGACAGATCAAATGGTGGCCCAATAGCGAGCCTTCTCCCTGCTCCCTCCCTTGACACAGCTTGCTTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
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| 3UTR-3UTR TCA 90 bp | GCCACCCTCCACAGCAATGGCAGGCGATGCAAGAGGTGCCCACAGTGTGACTGGCACAAACGATTTTGCTaGATGAAAGTGTTGTGCCCT | + |
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Preference number: 2 (lower is better) Translates to: ATLHSNGRRCKRCPQCDWHKRFC*MKVLCP Trigger: AGGGCACAACACTTTCATTCAGCAAAATCGTTTGTG...CCAGTCACACTGTGGGCACCTCTTGCATCGCCTGCCATTGCTGTGGAGGGTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
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| 3UTR-3UTR TCA 90 bp | AGGCGGCAGTGTGAGCCCCATCACGAGGCTACCCAGAGGGGCAGGTTTGTGGAGTACACCCTTTCCAAATaGAAAAAGTTTGTGGGTCGA | + |
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Preference number: 2 (lower is better) Translates to: RRQCEPHHEATQRGRFVEYTLSK*KKFVGR Trigger: TCGACCCACAAACTTTTTTCATTTGGAAAGGGTGTA...CTCCACAAACCTGCCCCTCTGGGTAGCCTCGTGATGGGGCTCACACTGCCGCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000041388.11 |
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| 3UTR-3UTR GCA 90 bp | ACGTGGGTTGCCAAGCATCACCTTGGCAAGGTCCCTAAGGAAAAGAGCCACGGGGGGGTAAGGAGGAGTTaGCTTCTCTTTCTCCCCATA | + |
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Preference number: 2 (lower is better) Translates to: TWVAKHHLGKVPKEKSHGGVRRS*LLFLPI Trigger: TATGGGGAGAAAGAGAAGGCAACTCCTCCTTACCCC...CCCGTGGCTCTTTTCCTTAGGGACCTTGCCAAGGTGATGCTTGGCAACCCACGT 54% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000041388.11 |
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| 3UTR-3UTR TCA 90 bp | ACGTGGGTTGCCAAGCATCACCTTGGCAAGGTCCCTAAGGAAAAGAGCCACGGGCAGATCCAGGTACTGTaGGTTCTATGGTCCATGAGA | + |
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Preference number: 2 (lower is better) Translates to: TWVAKHHLGKVPKEKSHGQIQVL*VLWSMR Trigger: TCTCATGGACCATAGAACTCACAGTACCTGGATCTG...CCCGTGGCTCTTTTCCTTAGGGACCTTGCCAAGGTGATGCTTGGCAACCCACGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041388.11 |
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| 3UTR-3UTR GCA 90 bp | GCAATGGCAGGCGATGCAAGAGGTGCCCACAGTGTGACTGGAACACAAACGATTGTCCGAGGTCTGGGATaGTGGTTGGAAAGATTACCA | + |
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Preference number: 2 (lower is better) Translates to: AMAGDARGAHSVTGTQTIVRGLG*WLERLP Trigger: TGGTAATCTTTCCAACCAGCATCCCAGACCTCGGAC...AATCGTTTGTGTTCCAGTCACACTGTGGGCACCTCTTGCATCGCCTGCCATTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
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| 3UTR-3UTR GCA 90 bp | GTGAGTCACCAGTGCAGCTCTGACTCACCCAGTAATTGGAGAAAGTTCTGTCCTAGGCGATGCAAGAGGTaGCCACAGTGTGACTGGAAC | + |
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Preference number: 2 (lower is better) Translates to: VSHQCSSDSPSNWRKFCPRRCKR*PQCDWN Trigger: GTTCCAGTCACACTGTGGGCACCTCTTGCATCGCCT...AGGACAGAACTTTCTCCAATTACTGGGTGAGTCAGAGCTGCACTGGTGACTCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
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| 3UTR-3UTR GCA 90 bp | GTGAGTCACCAGTGCAGCTCTGACTCACCCAGTAATTGGAGAAAGTTCTGTCCTAGCAATGGCAGGCGATaGAAGAGGTGCCCACAGTGT | + |
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Preference number: 2 (lower is better) Translates to: VSHQCSSDSPSNWRKFCPSNGRR*KRCPQC Trigger: ACACTGTGGGCACCTCTTGCATCGCCTGCCATTGCT...AGGACAGAACTTTCTCCAATTACTGGGTGAGTCAGAGCTGCACTGGTGACTCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
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| 3UTR-3UTR CCA 90 bp | GCAATGGCAGGCGATGCAAGAGGTGCCCACAGTGTGACTGGAACACAAACGATTCAAGAGTCCGAGGTCTaGGATGCTGGTTGGAAAGAT | + |
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Preference number: 2 (lower is better) Translates to: AMAGDARGAHSVTGTQTIQESEV*DAGWKD Trigger: ATCTTTCCAACCAGCATCCCAGACCTCGGACTCTTG...AATCGTTTGTGTTCCAGTCACACTGTGGGCACCTCTTGCATCGCCTGCCATTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
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| 3UTR-3UTR CCA 90 bp | TTTTCCGGTGGAGACATAACAGATGCAGAGTGGCCTGCTAGGAAATTACATTCATGGAGGTGGGCAAGGTaGACATTTCCACAGTGGACC | + |
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Preference number: 2 (lower is better) Translates to: FSGGDITDAEWPARKLHSWRWAR*TFPQWT Trigger: GGTCCACTGTGGAAATGTCCACCTTGCCCACCTCCA...TGAATGTAATTTCCTAGCAGGCCACTCTGCATCTGTTATGTCTCCACCGGAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
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| 3UTR-3UTR TCA 90 bp | GTCACCAGTGCAGCTCTGACTCACCCAGTAATTGGAGAAAGTTCTGTCCTGTTACAGATCCAGGTACTGTaGGTTCTATGGTCCATGAGA | + |
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Preference number: 2 (lower is better) Translates to: VTSAALTHPVIGESSVLLQIQVL*VLWSMR Trigger: TCTCATGGACCATAGAACTCACAGTACCTGGATCTG...TAACAGGACAGAACTTTCTCCAATTACTGGGTGAGTCAGAGCTGCACTGGTGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
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| 3UTR-3UTR GCA 90 bp | GTGAGTCACCAGTGCAGCTCTGACTCACCCAGTAATTGGAGAAAGTTCTGTCCTCTTGAGATAGGACAGTaGTTTTTCCTTTGGCCCATG | + |
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Preference number: 2 (lower is better) Translates to: VSHQCSSDSPSNWRKFCPLEIGQ*FFLWPM Trigger: CATGGGCCAAAGGAAAAAGCACTGTCCTATCTCAAG...AGGACAGAACTTTCTCCAATTACTGGGTGAGTCAGAGCTGCACTGGTGACTCAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
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| 3UTR-3UTR CCA 90 bp | GTGAGTCACCAGTGCAGCTCTGACTCACCCAGTAATTGGAGAAAGTTCTGTCCTTGCCCACAGTGTGACTaGAACACAAACGATTTTGCT | + |
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Preference number: 2 (lower is better) Translates to: VSHQCSSDSPSNWRKFCPCPQCD*NTNDFA Trigger: AGCAAAATCGTTTGTGTTCCAGTCACACTGTGGGCA...AGGACAGAACTTTCTCCAATTACTGGGTGAGTCAGAGCTGCACTGGTGACTCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
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| 3UTR-3UTR GCA 90 bp | TTTTCCGGTGGAGACATAACAGATGCAGAGTGGCCTGCTAGGAAATTACATTCAGTCCGAGGTCTGGGATaGTGGTTGGAAAGATTACCA | + |
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Preference number: 2 (lower is better) Translates to: FSGGDITDAEWPARKLHSVRGLG*WLERLP Trigger: TGGTAATCTTTCCAACCAGCATCCCAGACCTCGGAC...TGAATGTAATTTCCTAGCAGGCCACTCTGCATCTGTTATGTCTCCACCGGAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
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| 3UTR-3UTR CCA 90 bp | TTTTCCGGTGGAGACATAACAGATGCAGAGTGGCCTGCTAGGAAATTACATTCAGAAAGATTACCAGTGTaGGGGGTAAGGAGGAGTTGC | + |
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Preference number: 2 (lower is better) Translates to: FSGGDITDAEWPARKLHSERLPV*GVRRSC Trigger: GCAACTCCTCCTTACCCCCCACACTGGTAATCTTTC...TGAATGTAATTTCCTAGCAGGCCACTCTGCATCTGTTATGTCTCCACCGGAAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
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| 3UTR-3UTR CCA 90 bp | TTTTCCGGTGGAGACATAACAGATGCAGAGTGGCCTGCTAGGAAATTACATTCACAAGAGTCCGAGGTCTaGGATGCTGGTTGGAAAGAT | + |
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Preference number: 2 (lower is better) Translates to: FSGGDITDAEWPARKLHSQESEV*DAGWKD Trigger: ATCTTTCCAACCAGCATCCCAGACCTCGGACTCTTG...TGAATGTAATTTCCTAGCAGGCCACTCTGCATCTGTTATGTCTCCACCGGAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
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| 3UTR-3UTR TCA 90 bp | ACCAGTGCAGCTCTGACTCACCCAGTAATTGGAGAAAGTTCTGTCCTGTTAGGTCACAAACGATTTTGCTaGATGAAAGTGTTGTGCCCT | + |
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Preference number: 2 (lower is better) Translates to: TSAALTHPVIGESSVLLGHKRFC*MKVLCP Trigger: AGGGCACAACACTTTCATTCAGCAAAATCGTTTGTG...ACCTAACAGGACAGAACTTTCTCCAATTACTGGGTGAGTCAGAGCTGCACTGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
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| 3UTR-3UTR GCA 90 bp | CTTCTTCTCCCCAACAAACATACAAGAGCAAGAGATAAATATTCAATCACACCCAGGCGATGCAAGAGGTaGCCACAGTGTGACTGGAAC | + |
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Preference number: 2 (lower is better) Translates to: LLLPNKHTRARDKYSITPRRCKR*PQCDWN Trigger: GTTCCAGTCACACTGTGGGCACCTCTTGCATCGCCT...GGGTGTGATTGAATATTTATCTCTTGCTCTTGTATGTTTGTTGGGGAGAAGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
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| 3UTR-3UTR GCA 90 bp | CTTCTTCTCCCCAACAAACATACAAGAGCAAGAGATAAATATTCAATCACACCCGATCTGTCTATCCGTTaGCCCTTGGAGGTGGGCAAG | + |
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Preference number: 2 (lower is better) Translates to: LLLPNKHTRARDKYSITPDLSIR*PLEVGK Trigger: CTTGCCCACCTCCAAGGGGCAACGGATAGACAGATC...GGGTGTGATTGAATATTTATCTCTTGCTCTTGTATGTTTGTTGGGGAGAAGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
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| 3UTR-3UTR TCA 90 bp | ACCAGTGCAGCTCTGACTCACCCAGTAATTGGAGAAAGTTCTGTCCTGTTAGGTAAGTCACCTACACTCTaGAATAACATAAGCAAGCTG | + |
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Preference number: 2 (lower is better) Translates to: TSAALTHPVIGESSVLLGKSPTL*NNISKL Trigger: CAGCTTGCTTATGTTATTTCAGAGTGTAGGTGACTT...ACCTAACAGGACAGAACTTTCTCCAATTACTGGGTGAGTCAGAGCTGCACTGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
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| 3UTR-3UTR TCA 90 bp | ACCAGTGCAGCTCTGACTCACCCAGTAATTGGAGAAAGTTCTGTCCTGTTAGGTTACACCCTTTCCAAATaGAAAAAGTTTGTGGGTCGA | + |
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Preference number: 2 (lower is better) Translates to: TSAALTHPVIGESSVLLGYTLSK*KKFVGR Trigger: TCGACCCACAAACTTTTTTCATTTGGAAAGGGTGTA...ACCTAACAGGACAGAACTTTCTCCAATTACTGGGTGAGTCAGAGCTGCACTGGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
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| 3UTR-3UTR GCA 90 bp | GTCACCAGTGCAGCTCTGACTCACCCAGTAATTGGAGAAAGTTCTGTCCTGTTACTCTCTGCTTCTGAATaGCTTGGAAAAATAAGAAGC | + |
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Preference number: 2 (lower is better) Translates to: VTSAALTHPVIGESSVLLLSASE*LGKIRS Trigger: GCTTCTTATTTTTCCAAGGCATTCAGAAGCAGAGAG...TAACAGGACAGAACTTTCTCCAATTACTGGGTGAGTCAGAGCTGCACTGGTGAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000077523.4 |
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| 3UTR-3UTR CCA 90 bp | ACAAACATACAAGAGCAAGAGATAAATATTCAATCACACCCCTGGAATCTCCCCGAAAGATTACCAGTGTaGGGGGTAAGGAGGAGTTGC | + |
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Preference number: 2 (lower is better) Translates to: TNIQEQEINIQSHPWNLPERLPV*GVRRSC Trigger: GCAACTCCTCCTTACCCCCCACACTGGTAATCTTTC...GGGGAGATTCCAGGGGTGTGATTGAATATTTATCTCTTGCTCTTGTATGTTTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
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| 3UTR CAA 90 bp | CAGATGCAGAGTGGCCTGCTAGGAAATTACATTCACGGTACCTTCTaGTGCAGTTTTTCAGTAAATTGGTTTTCTGATCATACCTCCAGC | + |
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Preference number: 2 (lower is better) Translates to: QMQSGLLGNYIHGTF*CSFSVNWFSDHTSS Trigger: GCTGGAGGTATGATCAGAAAACCAATTTACTGAAAAACTGCACAAGAAGGTACCGTGAATGTAATTTCCTAGCAGGCCACTCTGCATCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
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| 3UTR-3UTR GCA 90 bp | GTGCTTCTTCTCCCCAACAAACATACAAGAGCAAGAGATAAATATTCAATCACAGGGGTAAGGAGGAGTTaGCTTCTCTTTCTCCCCATA | + |
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Preference number: 2 (lower is better) Translates to: VLLLPNKHTRARDKYSITGVRRS*LLFLPI Trigger: TATGGGGAGAAAGAGAAGGCAACTCCTCCTTACCCC...TGTGATTGAATATTTATCTCTTGCTCTTGTATGTTTGTTGGGGAGAAGAAGCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
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| 3UTR-3UTR GCA 90 bp | GTGCTTCTTCTCCCCAACAAACATACAAGAGCAAGAGATAAATATTCAATCACACTTGAGATAGGACAGTaGTTTTTCCTTTGGCCCATG | + |
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Preference number: 2 (lower is better) Translates to: VLLLPNKHTRARDKYSITLEIGQ*FFLWPM Trigger: CATGGGCCAAAGGAAAAAGCACTGTCCTATCTCAAG...TGTGATTGAATATTTATCTCTTGCTCTTGTATGTTTGTTGGGGAGAAGAAGCAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
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| 3UTR-3UTR CAA 90 bp | GGGTGTGTTCGGCTGCCACTAGGCGGCAGTGTGAGCCCCATCACGAGGCTACCCTCTATCCGTTGCCCCTaGGAGGTGGGCAAGGTGGAC | + |
|
Preference number: 3 (lower is better) Translates to: GCVRLPLGGSVSPITRLPSIRCP*EVGKVD Trigger: GTCCACCTTGCCCACCTCCAAGGGGCAACGGATAGA...GGGTAGCCTCGTGATGGGGCTCACACTGCCGCCTAGTGGCAGCCGAACACACCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041388.11 |
||
| 3UTR GCA 72 bp | TGGCCCATGGCCACCCTCCACAGCAATGGCAGGCGATaGAAGAGGTGCCCACAGTGTGACTGGAACACAAAC | + |
|
Preference number: 3 (lower is better) Translates to: WPMATLHSNGRR*KRCPQCDWNTN Trigger: GTTTGTGTTCCAGTCACACTGTGGGCACCTCTTGCATCGCCTGCCATTGCTGTGGAGGGTGGCCATGGGCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
||
| 3UTR-3UTR CAA 90 bp | ATGAAAGTGTTGTGCCCTCCACTCTGCTGGGGCCTCGGTGGGAACTGGGTCCAAGGGGGTAAGGAGGAGTaGCCTTCTCTTTCTCCCCAT | + |
|
Preference number: 3 (lower is better) Translates to: MKVLCPPLCWGLGGNWVQGGKEE*PSLSPH Trigger: ATGGGGAGAAAGAGAAGGCAACTCCTCCTTACCCCC...TTGGACCCAGTTCCCACCGAGGCCCCAGCAGAGTGGAGGGCACAACACTTTCAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
||
| 3UTR CCA 72 bp | TGGGGCCTCGGTGGGAACTGGGTCCAAAGGGCATGCTaGGCAGATCCAGGTACTGTGAGTTCTATGGTCCAT | + |
|
Preference number: 3 (lower is better) Translates to: WGLGGNWVQRAC*ADPGTVSSMVH Trigger: ATGGACCATAGAACTCACAGTACCTGGATCTGCCCAGCATGCCCTTTGGACCCAGTTCCCACCGAGGCCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
||
| 3UTR-3UTR CAA 90 bp | TTGCTGAATGAAAGTGTTGTGCCCTCCACTCTGCTGGGGCCTCGGTGGGAACTGGGTCTGGGATGCTGGTaGGAAAGATTACCAGTGTGG | + |
|
Preference number: 3 (lower is better) Translates to: LLNESVVPSTLLGPRWELGLGCW*ERLPVW Trigger: CCACACTGGTAATCTTTCCAACCAGCATCCCAGACC...CAGTTCCCACCGAGGCCCCAGCAGAGTGGAGGGCACAACACTTTCATTCAGCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
||
| 3UTR-3UTR CAA 90 bp | AGGCTACCCAGAGGGGCAGGTTTGTGGAGTGATGCACCCCTGACATACAGGGATGGAGAAGGCTCGCTATaGGGCCACCATTTGATCTGT | + |
|
Preference number: 3 (lower is better) Translates to: RLPRGAGLWSDAPLTYRDGEGSL*GHHLIC Trigger: ACAGATCAAATGGTGGCCCAATAGCGAGCCTTCTCC...ATCCCTGTATGTCAGGGGTGCATCACTCCACAAACCTGCCCCTCTGGGTAGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041388.11 |
||
| 3UTR TCA 72 bp | GGGTCCAAAGGGCATGCTGGGCAGATCCAGGTACTGTaGGTTCTATGGTCCATGAGACCTTTGTGGGGTAGG | + |
|
Preference number: 3 (lower is better) Translates to: GSKGHAGQIQVL*VLWSMRPLWGR Trigger: CCTACCCCACAAAGGTCTCATGGACCATAGAACTCACAGTACCTGGATCTGCCCAGCATGCCCTTTGGACCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
||
| 3UTR GCA 72 bp | GCCACCCTCCACAGCAATGGCAGGCGATGCAAGAGGTaGCCACAGTGTGACTGGAACACAAACGATTTTGCT | + |
|
Preference number: 3 (lower is better) Translates to: ATLHSNGRRCKR*PQCDWNTNDFA Trigger: AGCAAAATCGTTTGTGTTCCAGTCACACTGTGGGCACCTCTTGCATCGCCTGCCATTGCTGTGGAGGGTGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
||
| 3UTR CCA 72 bp | TTGGGCCACCATTTGATCTGTCTATCCGTTGCCCCTTaGAGGTGGGCAAGGTGGACATTTCCACAGTGGACC | + |
|
Preference number: 3 (lower is better) Translates to: LGHHLICLSVAP*RWARWTFPQWT Trigger: GGTCCACTGTGGAAATGTCCACCTTGCCCACCTCCAAGGGGCAACGGATAGACAGATCAAATGGTGGCCCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
||
| 3UTR TCA 72 bp | CTGGGCAGATCCAGGTACTGTGAGTTCTATGGTCCATaGGACCTTTGTGGGGTAGGAATCCCTAGGGAGGAG | + |
|
Preference number: 3 (lower is better) Translates to: LGRSRYCEFYGP*DLCGVGIPREE Trigger: CTCCTCCCTAGGGATTCCTACCCCACAAAGGTCTCATGGACCATAGAACTCACAGTACCTGGATCTGCCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
||
| 3UTR TCA 72 bp | CCCACGTGTCCACTGCTCACATACAGCAGCCGGAAATaGCACATTGAAGTGAGTCACCAGTGCAGCTCTGAC | + |
|
Preference number: 3 (lower is better) Translates to: PTCPLLTYSSRK*HIEVSHQCSSD Trigger: GTCAGAGCTGCACTGGTGACTCACTTCAATGTGTCATTTCCGGCTGCTGTATGTGAGCAGTGGACACGTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
||
| 3UTR GCA 72 bp | GTGGACATTTCCACAGTGGACCTTGAGATAGGACAGTaGTTTTTCCTTTGGCCCATGGCCACCCTCCACAGC | + |
|
Preference number: 3 (lower is better) Translates to: VDISTVDLEIGQ*FFLWPMATLHS Trigger: GCTGTGGAGGGTGGCCATGGGCCAAAGGAAAAAGCACTGTCCTATCTCAAGGTCCACTGTGGAAATGTCCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
||
| 3UTR GCA 72 bp | CTCGCTATTGGGCCACCATTTGATCTGTCTATCCGTTaGCCCTTGGAGGTGGGCAAGGTGGACATTTCCACA | + |
|
Preference number: 3 (lower is better) Translates to: LAIGPPFDLSIR*PLEVGKVDIST Trigger: TGTGGAAATGTCCACCTTGCCCACCTCCAAGGGGCAACGGATAGACAGATCAAATGGTGGCCCAATAGCGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
||
| 3UTR TCA 72 bp | CCACAGTGTGACTGGAACACAAACGATTTTGCTGAATaGAAGTGTTGTGCCCTCCACTCTGCTGGGGCCTCG | + |
|
Preference number: 3 (lower is better) Translates to: PQCDWNTNDFAE*KCCALHSAGAS Trigger: CGAGGCCCCAGCAGAGTGGAGGGCACAACACTTTCATTCAGCAAAATCGTTTGTGTTCCAGTCACACTGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
||
| 3UTR CCA 72 bp | GTGAGTCACCAGTGCAGCTCTGACTCACCCAGTAATTaGAGAAAGTTCTGTCCTGTTAGGTCACACAGCCCC | + |
|
Preference number: 3 (lower is better) Translates to: VSHQCSSDSPSN*RKFCPVRSHSP Trigger: GGGGCTGTGTGACCTAACAGGACAGAACTTTCTCCAATTACTGGGTGAGTCAGAGCTGCACTGGTGACTCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
||
| 3UTR-3UTR CAA 90 bp | TTTTCCGGTGGAGACATAACAGATGCAGAGTGGCCTGCTAGGAAATTACATTCATCTATCCGTTGCCCCTaGGAGGTGGGCAAGGTGGAC | + |
|
Preference number: 3 (lower is better) Translates to: FSGGDITDAEWPARKLHSSIRCP*EVGKVD Trigger: GTCCACCTTGCCCACCTCCAAGGGGCAACGGATAGA...TGAATGTAATTTCCTAGCAGGCCACTCTGCATCTGTTATGTCTCCACCGGAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
||
| 3UTR-3UTR CAA 90 bp | GCAAGAGGTGCCCACAGTGTGACTGGAACACAAACGATTTTGCTGAATGAAAGTGGGGGTAAGGAGGAGTaGCCTTCTCTTTCTCCCCAT | + |
|
Preference number: 3 (lower is better) Translates to: ARGAHSVTGTQTILLNESGGKEE*PSLSPH Trigger: ATGGGGAGAAAGAGAAGGCAACTCCTCCTTACCCCC...ACTTTCATTCAGCAAAATCGTTTGTGTTCCAGTCACACTGTGGGCACCTCTTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
||
| 3UTR CCA 72 bp | GATGCACCCCTGACATACAGGGATGCAGACCCCAAATaGGATGCCGTATGCCACGGTTTAAATAAGAAGCAT | + |
|
Preference number: 3 (lower is better) Translates to: DAPLTYRDADPK*DAVCHGLNKKH Trigger: ATGCTTCTTATTTAAACCGTGGCATACGGCATCCCATTTGGGGTCTGCATCCCTGTATGTCAGGGGTGCATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041388.11 |
||
| 3UTR-3UTR CAA 90 bp | GTGAGTCACCAGTGCAGCTCTGACTCACCCAGTAATTGGAGAAAGTTCTGTCCTGGAACACAAACGATTTaGCTGAATGAAAGTGTTGTG | + |
|
Preference number: 3 (lower is better) Translates to: VSHQCSSDSPSNWRKFCPGTQTI*LNESVV Trigger: CACAACACTTTCATTCAGCAAAATCGTTTGTGTTCC...AGGACAGAACTTTCTCCAATTACTGGGTGAGTCAGAGCTGCACTGGTGACTCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
||
| 3UTR-3UTR CAA 90 bp | CTTCTTCTCCCCAACAAACATACAAGAGCAAGAGATAAATATTCAATCACACCCGGTCTGGGATGCTGGTaGGAAAGATTACCAGTGTGG | + |
|
Preference number: 3 (lower is better) Translates to: LLLPNKHTRARDKYSITPGLGCW*ERLPVW Trigger: CCACACTGGTAATCTTTCCAACCAGCATCCCAGACC...GGGTGTGATTGAATATTTATCTCTTGCTCTTGTATGTTTGTTGGGGAGAAGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
||
| 3UTR-3UTR CAA 90 bp | CTTCTTCTCCCCAACAAACATACAAGAGCAAGAGATAAATATTCAATCACACCCGGAGAAGGCTCGCTATaGGGCCACCATTTGATCTGT | + |
|
Preference number: 3 (lower is better) Translates to: LLLPNKHTRARDKYSITPGEGSL*GHHLIC Trigger: ACAGATCAAATGGTGGCCCAATAGCGAGCCTTCTCC...GGGTGTGATTGAATATTTATCTCTTGCTCTTGTATGTTTGTTGGGGAGAAGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
||
| 3UTR TCA 72 bp | TTTTCCCTCTCTGCTTCTGAATGCCTTGGAAAAATTTaGAACCACTTTGCCCTCTCTCAAATCTCTCTCTCT | + |
|
Preference number: 3 (lower is better) Translates to: FSLSASECLGKI*NHFALSQISLS Trigger: AGAGAGAGAGATTTGAGAGAGGGCAAAGTGGTTTCAAATTTTTCCAAGGCATTCAGAAGCAGAGAGGGAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041388.11 |
||
| CDS-3UTR GCA 90 bp | AGGCGGCAGTGTGAGCCCCATCACGAGGCTACCCAGAGGGGCAGGTTTGTGGAGCCCGCTGTGGTCATCTaGAGCATAGCCAGCACCGAG | + |
|
Preference number: 4 (lower is better) Translates to: RRQCEPHHEATQRGRFVEPAVVI*SIASTE Trigger: CTCGGTGCTGGCTATGCTGCAGATGACCACAGCGGG...CTCCACAAACCTGCCCCTCTGGGTAGCCTCGTGATGGGGCTCACACTGCCGCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041388.11 |
||
| CDS-3UTR TCA 90 bp | GCCACCCTCCACAGCAATGGCAGGCGATGCAAGAGGTGCCCACAGTGTGACTGGGGTCGGAAAGACTTGTaGAGTCGGCCAGGGTTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: ATLHSNGRRCKRCPQCDWGRKDL*SRPGLH Trigger: GTGCAACCCTGGCCGACTTCACAAGTCTTTCCGACC...CCAGTCACACTGTGGGCACCTCTTGCATCGCCTGCCATTGCTGTGGAGGGTGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
||
| CDS-3UTR TCA 90 bp | GGGTGTGTTCGGCTGCCACTAGGCGGCAGTGTGAGCCCCATCACGAGGCTACCCTTGAACTTGTTGCTCTaGGCCATCATGGGCACAGAG | + |
|
Preference number: 4 (lower is better) Translates to: GCVRLPLGGSVSPITRLPLNLLL*AIMGTE Trigger: CTCTGTGCCCATGATGGCTCAGAGCAACAAGTTCAA...GGGTAGCCTCGTGATGGGGCTCACACTGCCGCCTAGTGGCAGCCGAACACACCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041388.11 |
||
| CDS-3UTR CCA 90 bp | CTCCACAGCAATGGCAGGCGATGCAAGAGGTGCCCACAGTGTGACTGGAACACATGGGGCATGAAGCCCTaGACCAGCTCTAGGTCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: LHSNGRRCKRCPQCDWNTWGMKP*TSSRSR Trigger: GCGGGACCTAGAGCTGGTCCAGGGCTTCATGCCCCA...TGTGTTCCAGTCACACTGTGGGCACCTCTTGCATCGCCTGCCATTGCTGTGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
||
| CDS-3UTR TCA 90 bp | AGGCTACCCAGAGGGGCAGGTTTGTGGAGTGATGCACCCCTGACATACAGGGATGAACCAGGCCCAGGATaGGGCAAGCAAGGGCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: RLPRGAGLWSDAPLTYRDEPGPG*GKQGLK Trigger: CTTCAGCCCTTGCTTGCCTCATCCTGGGCCTGGTTC...ATCCCTGTATGTCAGGGGTGCATCACTCCACAAACCTGCCCCTCTGGGTAGCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041388.11 |
||
| CDS-3UTR CCA 90 bp | TTGCTGAATGAAAGTGTTGTGCCCTCCACTCTGCTGGGGCCTCGGTGGGAACTGGGAGGCGGGGCAGCCTaGTCATGTTGCCCTTCCATT | + |
|
Preference number: 4 (lower is better) Translates to: LLNESVVPSTLLGPRWELGGGAA*SCCPSI Trigger: AATGGAAGGGCAACATGACCAGGCTGCCCCGCCTCC...CAGTTCCCACCGAGGCCCCAGCAGAGTGGAGGGCACAACACTTTCATTCAGCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
||
| CDS-3UTR TCA 90 bp | GCCACCCTCCACAGCAATGGCAGGCGATGCAAGAGGTGCCCACAGTGTGACTGGTCTTCCATTGGCCACTaGAGTAGAGGGCATTCACCA | + |
|
Preference number: 4 (lower is better) Translates to: ATLHSNGRRCKRCPQCDWSSIGH*SRGHSP Trigger: TGGTGAATGCCCTCTACTTCAGTGGCCAATGGAAGA...CCAGTCACACTGTGGGCACCTCTTGCATCGCCTGCCATTGCTGTGGAGGGTGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
||
| CDS-3UTR GCA 90 bp | GCCACCCTCCACAGCAATGGCAGGCGATGCAAGAGGTGCCCACAGTGTGACTGGCTTTTGCAGTGCCTGTaGTACAGAGAGCTGCTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: ATLHSNGRRCKRCPQCDWLLQCL*YRELLL Trigger: CAAGAGCAGCTCTCTGTAGCACAGGCACTGCAAAAG...CCAGTCACACTGTGGGCACCTCTTGCATCGCCTGCCATTGCTGTGGAGGGTGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
||
| CDS-3UTR CCA 90 bp | TTGCTGAATGAAAGTGTTGTGCCCTCCACTCTGCTGGGGCCTCGGTGGGAACTGTGCTCTGAGCCATCATaGGCACAGAGACGGTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LLNESVVPSTLLGPRWELCSEPS*AQRRCC Trigger: GCAGCACCGTCTCTGTGCCCATGATGGCTCAGAGCA...CAGTTCCCACCGAGGCCCCAGCAGAGTGGAGGGCACAACACTTTCATTCAGCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
||
| CDS-3UTR GCA 90 bp | GCAATGGCAGGCGATGCAAGAGGTGCCCACAGTGTGACTGGAACACAAACGATTCCCGCTGTGGTCATCTaGAGCATAGCCAGCACCGAG | + |
|
Preference number: 4 (lower is better) Translates to: AMAGDARGAHSVTGTQTIPAVVI*SIASTE Trigger: CTCGGTGCTGGCTATGCTGCAGATGACCACAGCGGG...AATCGTTTGTGTTCCAGTCACACTGTGGGCACCTCTTGCATCGCCTGCCATTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
||
| CDS-3UTR CCA 90 bp | ATGAAAGTGTTGTGCCCTCCACTCTGCTGGGGCCTCGGTGGGAACTGGGTCCAAAAGAGCTTGAAGAAGTaGGGCATGAAGCCCTGGACC | + |
|
Preference number: 4 (lower is better) Translates to: MKVLCPPLCWGLGGNWVQKSLKK*GMKPWT Trigger: GGTCCAGGGCTTCATGCCCCACTTCTTCAAGCTCTT...TTGGACCCAGTTCCCACCGAGGCCCCAGCAGAGTGGAGGGCACAACACTTTCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
||
| CDS-3UTR CCA 90 bp | TTGCTGAATGAAAGTGTTGTGCCCTCCACTCTGCTGGGGCCTCGGTGGGAACTGTGGAAGAGGCGCTGGTaGGTGCTGGCCTCTAAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: LLNESVVPSTLLGPRWELWKRRW*VLASKK Trigger: TTTCTTAGAGGCCAGCACCCACCAGCGCCTCTTCCA...CAGTTCCCACCGAGGCCCCAGCAGAGTGGAGGGCACAACACTTTCATTCAGCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
||
| 3UTR CAA 72 bp | CTGTGTCAAGGGAGGGAGCAGGGAGAAGGCTCGCTATaGGGCCACCATTTGATCTGTCTATCCGTTGCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: LCQGREQGEGSL*GHHLICLSVAP Trigger: AGGGGCAACGGATAGACAGATCAAATGGTGGCCCAATAGCGAGCCTTCTCCCTGCTCCCTCCCTTGACACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
||
| CDS-3UTR TCA 90 bp | TTGCTGAATGAAAGTGTTGTGCCCTCCACTCTGCTGGGGCCTCGGTGGGAACTGGCCTGGACCACCTGCTaGAACACTTTTACTCCGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LLNESVVPSTLLGPRWELAWTTC*NTFTPK Trigger: CTTCGGAGTAAAAGTGTTTCAGCAGGTGGTCCAGGC...CAGTTCCCACCGAGGCCCCAGCAGAGTGGAGGGCACAACACTTTCATTCAGCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
||
| CDS-3UTR TCA 90 bp | ATGAAAGTGTTGTGCCCTCCACTCTGCTGGGGCCTCGGTGGGAACTGGGTCCAATGGCATCCGCAGTACTaGTCTCATTCTTGTTCCACG | + |
|
Preference number: 4 (lower is better) Translates to: MKVLCPPLCWGLGGNWVQWHPQY*SHSCST Trigger: CGTGGAACAAGAATGAGATCAGTACTGCGGATGCCA...TTGGACCCAGTTCCCACCGAGGCCCCAGCAGAGTGGAGGGCACAACACTTTCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
||
| CDS-3UTR TCA 90 bp | AGCAAGCTGTGTCAAGGGAGGGAGCAGGGAGAAGGCTCGCTATTGGGCCACCATTTGAACTTGTTGCTCTaGGCCATCATGGGCACAGAG | + |
|
Preference number: 4 (lower is better) Translates to: SKLCQGREQGEGSLLGHHLNLLL*AIMGTE Trigger: CTCTGTGCCCATGATGGCTCAGAGCAACAAGTTCAA...ATGGTGGCCCAATAGCGAGCCTTCTCCCTGCTCCCTCCCTTGACACAGCTTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
||
| CDS-3UTR TCA 90 bp | GCAATGGCAGGCGATGCAAGAGGTGCCCACAGTGTGACTGGAACACAAACGATTCCATGCGGGCTGAGATaGCAAAGGCTGTGGAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: AMAGDARGAHSVTGTQTIPCGLR*QRLWRK Trigger: CTTCCTCCACAGCCTTTGTCATCTCAGCCCGCATGG...AATCGTTTGTGTTCCAGTCACACTGTGGGCACCTCTTGCATCGCCTGCCATTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
||
| CDS-3UTR GCA 90 bp | AGCAAGCTGTGTCAAGGGAGGGAGCAGGGAGAAGGCTCGCTATTGGGCCACCATGAAGTCGGCCAGGGTTaGACTAAACATGTCAGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: SKLCQGREQGEGSLLGHHEVGQG*TKHVRH Trigger: ATGCCTGACATGTTTAGTGCAACCCTGGCCGACTTC...ATGGTGGCCCAATAGCGAGCCTTCTCCCTGCTCCCTCCCTTGACACAGCTTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
||
| CDS-3UTR CCA 90 bp | GCAATGGCAGGCGATGCAAGAGGTGCCCACAGTGTGACTGGAACACAAACGATTGGCGCTGGTGGGTGCTaGCCTCTAAGAAAGGAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: AMAGDARGAHSVTGTQTIGAGGC*PLRKES Trigger: AGACTCCTTTCTTAGAGGCCAGCACCCACCAGCGCC...AATCGTTTGTGTTCCAGTCACACTGTGGGCACCTCTTGCATCGCCTGCCATTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
||
| CDS-3UTR CCA 90 bp | AGCAAGCTGTGTCAAGGGAGGGAGCAGGGAGAAGGCTCGCTATTGGGCCACCATCAAGGCTCCATCACTTaGCCCATGAAGAGGATTGTC | + |
|
Preference number: 4 (lower is better) Translates to: SKLCQGREQGEGSLLGHHQGSIT*PMKRIV Trigger: GACAATCCTCTTCATGGGCCAAGTGATGGAGCCTTG...ATGGTGGCCCAATAGCGAGCCTTCTCCCTGCTCCCTCCCTTGACACAGCTTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
||
| CDS-3UTR TCA 90 bp | GTGAGTCACCAGTGCAGCTCTGACTCACCCAGTAATTGGAGAAAGTTCTGTCCTAGCTGGCGGAGGGCATaGGCTGTGCCCTTCTCATTG | + |
|
Preference number: 4 (lower is better) Translates to: VSHQCSSDSPSNWRKFCPSWRRA*AVPFSL Trigger: CAATGAGAAGGGCACAGCTCATGCCCTCCGCCAGCT...AGGACAGAACTTTCTCCAATTACTGGGTGAGTCAGAGCTGCACTGGTGACTCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
||
| CDS-3UTR TCA 90 bp | GTCACCAGTGCAGCTCTGACTCACCCAGTAATTGGAGAAAGTTCTGTCCTGTTATGTTCCACGGCCCCATaGGCTCCTTGGAGAGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: VTSAALTHPVIGESSVLLCSTAP*APWRAG Trigger: GCCAGCTCTCCAAGGAGCTCATGGGGCCGTGGAACA...TAACAGGACAGAACTTTCTCCAATTACTGGGTGAGTCAGAGCTGCACTGGTGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
||
| CDS-3UTR TCA 90 bp | AGGCTACCCAGAGGGGCAGGTTTGTGGAGTGATGCACCCCTGACATACAGGGATTCTTCCATTGGCCACTaGAGTAGAGGGCATTCACCA | + |
|
Preference number: 4 (lower is better) Translates to: RLPRGAGLWSDAPLTYRDSSIGH*SRGHSP Trigger: TGGTGAATGCCCTCTACTTCAGTGGCCAATGGAAGA...ATCCCTGTATGTCAGGGGTGCATCACTCCACAAACCTGCCCCTCTGGGTAGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041388.11 |
||
| CDS-3UTR GCA 90 bp | CTCCACAGCAATGGCAGGCGATGCAAGAGGTGCCCACAGTGTGACTGGAACACACTTTTGCAGTGCCTGTaGTACAGAGAGCTGCTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LHSNGRRCKRCPQCDWNTLLQCL*YRELLL Trigger: CAAGAGCAGCTCTCTGTAGCACAGGCACTGCAAAAG...TGTGTTCCAGTCACACTGTGGGCACCTCTTGCATCGCCTGCCATTGCTGTGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
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| CDS-3UTR GCA 90 bp | TTGCTGAATGAAAGTGTTGTGCCCTCCACTCTGCTGGGGCCTCGGTGGGAACTGTCGATCCTGACCTTTTaGAGTGCCTGTGCTACAGAG | + |
|
Preference number: 4 (lower is better) Translates to: LLNESVVPSTLLGPRWELSILTF*SACATE Trigger: CTCTGTAGCACAGGCACTGCAAAAGGTCAGGATCGA...CAGTTCCCACCGAGGCCCCAGCAGAGTGGAGGGCACAACACTTTCATTCAGCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
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| CDS-3UTR CCA 90 bp | TTGCTGAATGAAAGTGTTGTGCCCTCCACTCTGCTGGGGCCTCGGTGGGAACTGAATCCCATAGCATCTTaGATCTGCCGCCGGGTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LLNESVVPSTLLGPRWELNPIAS*ICRRVF Trigger: GAAAACCCGGCGGCAGATCCAAGATGCTATGGGATT...CAGTTCCCACCGAGGCCCCAGCAGAGTGGAGGGCACAACACTTTCATTCAGCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
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| 3UTR CAA 72 bp | ATTGGGCCACCATTTGATCTGTCTATCCGTTGCCCCTaGGAGGTGGGCAAGGTGGACATTTCCACAGTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: IGPPFDLSIRCP*EVGKVDISTVD Trigger: GTCCACTGTGGAAATGTCCACCTTGCCCACCTCCAAGGGGCAACGGATAGACAGATCAAATGGTGGCCCAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
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| CDS-3UTR TCA 90 bp | GCAATGGCAGGCGATGCAAGAGGTGCCCACAGTGTGACTGGAACACAAACGATTGCCTGGACCACCTGCTaGAACACTTTTACTCCGAAG | + |
|
Preference number: 4 (lower is better) Translates to: AMAGDARGAHSVTGTQTIAWTTC*NTFTPK Trigger: CTTCGGAGTAAAAGTGTTTCAGCAGGTGGTCCAGGC...AATCGTTTGTGTTCCAGTCACACTGTGGGCACCTCTTGCATCGCCTGCCATTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
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| CDS-3UTR CCA 90 bp | GTGAGTCACCAGTGCAGCTCTGACTCACCCAGTAATTGGAGAAAGTTCTGTCCTTTGTGGAAGAGGCGCTaGTGGGTGCTGGCCTCTAAG | + |
|
Preference number: 4 (lower is better) Translates to: VSHQCSSDSPSNWRKFCPLWKRR*WVLASK Trigger: CTTAGAGGCCAGCACCCACCAGCGCCTCTTCCACAA...AGGACAGAACTTTCTCCAATTACTGGGTGAGTCAGAGCTGCACTGGTGACTCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
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| CDS-3UTR CCA 90 bp | GTCACCAGTGCAGCTCTGACTCACCCAGTAATTGGAGAAAGTTCTGTCCTGTTAGGAGGCGGGGCAGCCTaGTCATGTTGCCCTTCCATT | + |
|
Preference number: 4 (lower is better) Translates to: VTSAALTHPVIGESSVLLGGGAA*SCCPSI Trigger: AATGGAAGGGCAACATGACCAGGCTGCCCCGCCTCC...TAACAGGACAGAACTTTCTCCAATTACTGGGTGAGTCAGAGCTGCACTGGTGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
||
| CDS-3UTR TCA 90 bp | GCAAGAGGTGCCCACAGTGTGACTGGAACACAAACGATTTTGCTGAATGAAAGTGAACCAGGCCCAGGATaGGGCAAGCAAGGGCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: ARGAHSVTGTQTILLNESEPGPG*GKQGLK Trigger: CTTCAGCCCTTGCTTGCCTCATCCTGGGCCTGGTTC...ACTTTCATTCAGCAAAATCGTTTGTGTTCCAGTCACACTGTGGGCACCTCTTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
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| CDS-3UTR TCA 90 bp | GCAAGAGGTGCCCACAGTGTGACTGGAACACAAACGATTTTGCTGAATGAAAGTTCTCCAGGGGCCCTCTaGGGTCCACTTCAGTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: ARGAHSVTGTQTILLNESSPGAL*GPLQSP Trigger: TGGAGACTGAAGTGGACCTCAGAGGGCCCCTGGAGA...ACTTTCATTCAGCAAAATCGTTTGTGTTCCAGTCACACTGTGGGCACCTCTTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
||
| CDS-3UTR TCA 90 bp | TCACCCAGTAATTGGAGAAAGTTCTGTCCTGTTAGGTCACACAGCCCCTTTTCCGGTCGGAAAGACTTGTaGAGTCGGCCAGGGTTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: SPSNWRKFCPVRSHSPFSGRKDL*SRPGLH Trigger: GTGCAACCCTGGCCGACTTCACAAGTCTTTCCGACC...GGAAAAGGGGCTGTGTGACCTAACAGGACAGAACTTTCTCCAATTACTGGGTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
||
| CDS-3UTR GCA 90 bp | GTGAGTCACCAGTGCAGCTCTGACTCACCCAGTAATTGGAGAAAGTTCTGTCCTTGGGCACAGAGACGGTaGTGCCATCAGACTTGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: VSHQCSSDSPSNWRKFCPWAQRR*CHQTCG Trigger: TCCACAAGTCTGATGGCAGCACCGTCTCTGTGCCCA...AGGACAGAACTTTCTCCAATTACTGGGTGAGTCAGAGCTGCACTGGTGACTCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
||
| CDS-3UTR GCA 90 bp | CTCCACAGCAATGGCAGGCGATGCAAGAGGTGCCCACAGTGTGACTGGAACACAATCATACCTTTGGTATaGCTTTCCACCCAGTCATTG | + |
|
Preference number: 4 (lower is better) Translates to: LHSNGRRCKRCPQCDWNTIIPLV*LSTQSL Trigger: CAATGACTGGGTGGAAAGGCATACCAAAGGTATGAT...TGTGTTCCAGTCACACTGTGGGCACCTCTTGCATCGCCTGCCATTGCTGTGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
||
| CDS-3UTR GCA 90 bp | TCACCCAGTAATTGGAGAAAGTTCTGTCCTGTTAGGTCACACAGCCCCTTTTCCGTGAGGGCGGAGAGGTaGACATCTTTCTCAAAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: SPSNWRKFCPVRSHSPFSVRAER*TSFSKG Trigger: ACCCTTTGAGAAAGATGTGCACCTCTCCGCCCTCAC...GGAAAAGGGGCTGTGTGACCTAACAGGACAGAACTTTCTCCAATTACTGGGTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
||
| CDS-3UTR CCA 90 bp | TTTTCCGGTGGAGACATAACAGATGCAGAGTGGCCTGCTAGGAAATTACATTCAGGCGCTGGTGGGTGCTaGCCTCTAAGAAAGGAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: FSGGDITDAEWPARKLHSGAGGC*PLRKES Trigger: AGACTCCTTTCTTAGAGGCCAGCACCCACCAGCGCC...TGAATGTAATTTCCTAGCAGGCCACTCTGCATCTGTTATGTCTCCACCGGAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
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| CDS-3UTR CCA 90 bp | GTGAGTCACCAGTGCAGCTCTGACTCACCCAGTAATTGGAGAAAGTTCTGTCCTCAAGGCTCCATCACTTaGCCCATGAAGAGGATTGTC | + |
|
Preference number: 4 (lower is better) Translates to: VSHQCSSDSPSNWRKFCPQGSIT*PMKRIV Trigger: GACAATCCTCTTCATGGGCCAAGTGATGGAGCCTTG...AGGACAGAACTTTCTCCAATTACTGGGTGAGTCAGAGCTGCACTGGTGACTCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
||
| CDS-3UTR TCA 90 bp | CTTCTTCTCCCCAACAAACATACAAGAGCAAGAGATAAATATTCAATCACACCCTGTTCCACGGCCCCATaGGCTCCTTGGAGAGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LLLPNKHTRARDKYSITPCSTAP*APWRAG Trigger: GCCAGCTCTCCAAGGAGCTCATGGGGCCGTGGAACA...GGGTGTGATTGAATATTTATCTCTTGCTCTTGTATGTTTGTTGGGGAGAAGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
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| CDS-3UTR TCA 90 bp | TCACCCAGTAATTGGAGAAAGTTCTGTCCTGTTAGGTCACACAGCCCCTTTTCCTGGCATCCGCAGTACTaGTCTCATTCTTGTTCCACG | + |
|
Preference number: 4 (lower is better) Translates to: SPSNWRKFCPVRSHSPFSWHPQY*SHSCST Trigger: CGTGGAACAAGAATGAGATCAGTACTGCGGATGCCA...GGAAAAGGGGCTGTGTGACCTAACAGGACAGAACTTTCTCCAATTACTGGGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
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| CDS-3UTR GCA 90 bp | ACCAGTGCAGCTCTGACTCACCCAGTAATTGGAGAAAGTTCTGTCCTGTTAGGTGTCTCTGTCGGGTTGTaGCGAACCACAAAGAGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: TSAALTHPVIGESSVLLGVSVGL*RTTKRK Trigger: CTTTCTCTTTGTGGTTCGGCACAACCCGACAGAGAC...ACCTAACAGGACAGAACTTTCTCCAATTACTGGGTGAGTCAGAGCTGCACTGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
||
| CDS-3UTR CCA 90 bp | TCACCCAGTAATTGGAGAAAGTTCTGTCCTGTTAGGTCACACAGCCCCTTTTCCAATCCCATAGCATCTTaGATCTGCCGCCGGGTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: SPSNWRKFCPVRSHSPFSNPIAS*ICRRVF Trigger: GAAAACCCGGCGGCAGATCCAAGATGCTATGGGATT...GGAAAAGGGGCTGTGTGACCTAACAGGACAGAACTTTCTCCAATTACTGGGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
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| CDS-3UTR CCA 90 bp | CTTCTTCTCCCCAACAAACATACAAGAGCAAGAGATAAATATTCAATCACACCCTGGGGCATGAAGCCCTaGACCAGCTCTAGGTCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: LLLPNKHTRARDKYSITPWGMKP*TSSRSR Trigger: GCGGGACCTAGAGCTGGTCCAGGGCTTCATGCCCCA...GGGTGTGATTGAATATTTATCTCTTGCTCTTGTATGTTTGTTGGGGAGAAGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
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| CDS-3UTR TCA 90 bp | ACAAACATACAAGAGCAAGAGATAAATATTCAATCACACCCCTGGAATCTCCCCCCATGCGGGCTGAGATaGCAAAGGCTGTGGAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: TNIQEQEINIQSHPWNLPPCGLR*QRLWRK Trigger: CTTCCTCCACAGCCTTTGTCATCTCAGCCCGCATGG...GGGGAGATTCCAGGGGTGTGATTGAATATTTATCTCTTGCTCTTGTATGTTTGT 48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
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| CDS-3UTR GCA 90 bp | TTTTCCGGTGGAGACATAACAGATGCAGAGTGGCCTGCTAGGAAATTACATTCAGTGAGGGCGGAGAGGTaGACATCTTTCTCAAAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: FSGGDITDAEWPARKLHSVRAER*TSFSKG Trigger: ACCCTTTGAGAAAGATGTGCACCTCTCCGCCCTCAC...TGAATGTAATTTCCTAGCAGGCCACTCTGCATCTGTTATGTCTCCACCGGAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
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| CDS-3UTR GCA 90 bp | GCAAGAGGTGCCCACAGTGTGACTGGAACACAAACGATTTTGCTGAATGAAAGTTCGATCCTGACCTTTTaGAGTGCCTGTGCTACAGAG | + |
|
Preference number: 4 (lower is better) Translates to: ARGAHSVTGTQTILLNESSILTF*SACATE Trigger: CTCTGTAGCACAGGCACTGCAAAAGGTCAGGATCGA...ACTTTCATTCAGCAAAATCGTTTGTGTTCCAGTCACACTGTGGGCACCTCTTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
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| CDS-3UTR TCA 90 bp | GTGCTTCTTCTCCCCAACAAACATACAAGAGCAAGAGATAAATATTCAATCACATCTCCAGGGGCCCTCTaGGGTCCACTTCAGTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: VLLLPNKHTRARDKYSITSPGAL*GPLQSP Trigger: TGGAGACTGAAGTGGACCTCAGAGGGCCCCTGGAGA...TGTGATTGAATATTTATCTCTTGCTCTTGTATGTTTGTTGGGGAGAAGAAGCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
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| CDS-3UTR CCA 90 bp | CTTCTTCTCCCCAACAAACATACAAGAGCAAGAGATAAATATTCAATCACACCCTGCTCTGAGCCATCATaGGCACAGAGACGGTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LLLPNKHTRARDKYSITPCSEPS*AQRRCC Trigger: GCAGCACCGTCTCTGTGCCCATGATGGCTCAGAGCA...GGGTGTGATTGAATATTTATCTCTTGCTCTTGTATGTTTGTTGGGGAGAAGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
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| CDS-3UTR GCA 90 bp | ACCAGTGCAGCTCTGACTCACCCAGTAATTGGAGAAAGTTCTGTCCTGTTAGGTATCATACCTTTGGTATaGCTTTCCACCCAGTCATTG | + |
|
Preference number: 4 (lower is better) Translates to: TSAALTHPVIGESSVLLGIIPLV*LSTQSL Trigger: CAATGACTGGGTGGAAAGGCATACCAAAGGTATGAT...ACCTAACAGGACAGAACTTTCTCCAATTACTGGGTGAGTCAGAGCTGCACTGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
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| CDS-3UTR CCA 90 bp | GTGCTTCTTCTCCCCAACAAACATACAAGAGCAAGAGATAAATATTCAATCACATTGTGGAAGAGGCGCTaGTGGGTGCTGGCCTCTAAG | + |
|
Preference number: 4 (lower is better) Translates to: VLLLPNKHTRARDKYSITLWKRR*WVLASK Trigger: CTTAGAGGCCAGCACCCACCAGCGCCTCTTCCACAA...TGTGATTGAATATTTATCTCTTGCTCTTGTATGTTTGTTGGGGAGAAGAAGCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
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| CDS-3UTR GCA 90 bp | ACAAACATACAAGAGCAAGAGATAAATATTCAATCACACCCCTGGAATCTCCCCGAAGTCGGCCAGGGTTaGACTAAACATGTCAGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: TNIQEQEINIQSHPWNLPEVGQG*TKHVRH Trigger: ATGCCTGACATGTTTAGTGCAACCCTGGCCGACTTC...GGGGAGATTCCAGGGGTGTGATTGAATATTTATCTCTTGCTCTTGTATGTTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
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| CDS-3UTR CCA 90 bp | GTGCTTCTTCTCCCCAACAAACATACAAGAGCAAGAGATAAATATTCAATCACATGGAAGAGGCGCTGGTaGGTGCTGGCCTCTAAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: VLLLPNKHTRARDKYSITWKRRW*VLASKK Trigger: TTTCTTAGAGGCCAGCACCCACCAGCGCCTCTTCCA...TGTGATTGAATATTTATCTCTTGCTCTTGTATGTTTGTTGGGGAGAAGAAGCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
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| 3UTR CAA 72 bp | AGTGGCCTGCTAGGAAATTACATTCACGGTACCTTCTaGTGCAGTTTTTCAGTAAATTGGTTTTCTGATCAT | + |
|
Preference number: 4 (lower is better) Translates to: SGLLGNYIHGTF*CSFSVNWFSDH Trigger: ATGATCAGAAAACCAATTTACTGAAAAACTGCACAAGAAGGTACCGTGAATGTAATTTCCTAGCAGGCCACT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
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| CDS-3UTR CAA 90 bp | ATGAAAGTGTTGTGCCCTCCACTCTGCTGGGGCCTCGGTGGGAACTGGGTCCAAGGCCCCATGAGCTCCTaGGAGAGCTGGCGGAGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: MKVLCPPLCWGLGGNWVQGPMSS*ESWRRA Trigger: TGCCCTCCGCCAGCTCTCCAAGGAGCTCATGGGGCC...TTGGACCCAGTTCCCACCGAGGCCCCAGCAGAGTGGAGGGCACAACACTTTCAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
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| CDS-3UTR CAA 90 bp | GCCACCCTCCACAGCAATGGCAGGCGATGCAAGAGGTGCCCACAGTGTGACTGGGTGCTGCCATCAGACTaGTGGAAGAGGCGCTGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: ATLHSNGRRCKRCPQCDWVLPSD*WKRRWW Trigger: CCACCAGCGCCTCTTCCACAAGTCTGATGGCAGCAC...CCAGTCACACTGTGGGCACCTCTTGCATCGCCTGCCATTGCTGTGGAGGGTGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
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| CDS-3UTR CAA 90 bp | GGGTGTGTTCGGCTGCCACTAGGCGGCAGTGTGAGCCCCATCACGAGGCTACCCATTGTCTCTGTCGGGTaGTGCCGAACCACAAAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: GCVRLPLGGSVSPITRLPIVSVG*CRTTKR Trigger: TCTCTTTGTGGTTCGGCACAACCCGACAGAGACAAT...GGGTAGCCTCGTGATGGGGCTCACACTGCCGCCTAGTGGCAGCCGAACACACCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041388.11 |
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| CDS TCA 90 bp | GAGAAAGGATCGGTCTATAACCATCTCCGTGGGGGCCATGCGGGCTaGGATGACAAAGGCTGTGGAGGAAGACGCCACTGTGCCGCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: EKGSVYNHLRGGHAG*DDKGCGGRRHCAAL Trigger: GAGAGCGGCACAGTGGCGTCTTCCTCCACAGCCTTTGTCATCTCAGCCCGCATGGCCCCCACGGAGATGGTTATAGACCGATCCTTTCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
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| CDS CCA 90 bp | GGCACAGAGACGGTGCTGCCATCAGACTTGTGGAAGAGGCGCTGGTaGGTGCTGGCCTCTAAGAAAGGAGTCTTCCATTGGCCACTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: GTETVLPSDLWKRRW*VLASKKGVFHWPLK Trigger: CTTCAGTGGCCAATGGAAGACTCCTTTCTTAGAGGCCAGCACCCACCAGCGCCTCTTCCACAAGTCTGATGGCAGCACCGTCTCTGTGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
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| CDS CCA 90 bp | ATGGGCACAGAGACGGTGCTGCCATCAGACTTGTGGAAGAGGCGCTaGTGGGTGCTGGCCTCTAAGAAAGGAGTCTTCCATTGGCCACTG | + |
|
Preference number: 5 (lower is better) Translates to: MGTETVLPSDLWKRR*WVLASKKGVFHWPL Trigger: CAGTGGCCAATGGAAGACTCCTTTCTTAGAGGCCAGCACCCACCAGCGCCTCTTCCACAAGTCTGATGGCAGCACCGTCTCTGTGCCCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
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| CDS TCA 90 bp | GCTGGTGGGTGCTGGCCTCTAAGAAAGGAGTCTTCCATTGGCCACTaGAGTAGAGGGCATTCACCAGCACCAGGCGTGTCAGCTCGTCTA | + |
|
Preference number: 5 (lower is better) Translates to: AGGCWPLRKESSIGH*SRGHSPAPGVSARL Trigger: TAGACGAGCTGACACGCCTGGTGCTGGTGAATGCCCTCTACTTCAGTGGCCAATGGAAGACTCCTTTCTTAGAGGCCAGCACCCACCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
||
| CDS CCA 90 bp | GCACCGAGGACACGCCATAGGGAGAGAAGACCACATTCCGGTCTTTaGAGGCCTGGACCACCTGCTGAAACACTTTTACTCCGAAGTCGG | + |
|
Preference number: 5 (lower is better) Translates to: APRTRHRERRPHSGL*RPGPPAETLLLRSR Trigger: CCGACTTCGGAGTAAAAGTGTTTCAGCAGGTGGTCCAGGCCTCCAAAGACCGGAATGTGGTCTTCTCTCCCTATGGCGTGTCCTCGGTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
||
| CDS-3UTR CAA 90 bp | AGCAAGCTGTGTCAAGGGAGGGAGCAGGGAGAAGGCTCGCTATTGGGCCACCATGAATCCCATAGCATCTaGGATCTGCCGCCGGGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: SKLCQGREQGEGSLLGHHESHSI*DLPPGF Trigger: AAAACCCGGCGGCAGATCCAAGATGCTATGGGATTC...ATGGTGGCCCAATAGCGAGCCTTCTCCCTGCTCCCTCCCTTGACACAGCTTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
||
| CDS-3UTR CAA 90 bp | AGCAAGCTGTGTCAAGGGAGGGAGCAGGGAGAAGGCTCGCTATTGGGCCACCATGAAAGGAGTCTTCCATaGGCCACTGAAGTAGAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: SKLCQGREQGEGSLLGHHERSLP*ATEVEG Trigger: GCCCTCTACTTCAGTGGCCAATGGAAGACTCCTTTC...ATGGTGGCCCAATAGCGAGCCTTCTCCCTGCTCCCTCCCTTGACACAGCTTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
||
| CDS TCA 90 bp | TTGTTCCACGGCCCCATGAGCTCCTTGGAGAGCTGGCGGAGGGCATaGGCTGTGCCCTTCTCATTGACTTTGAATCCCATAGCATCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: LFHGPMSSLESWRRA*AVPFSLTLNPIASW Trigger: CCAAGATGCTATGGGATTCAAAGTCAATGAGAAGGGCACAGCTCATGCCCTCCGCCAGCTCTCCAAGGAGCTCATGGGGCCGTGGAACAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
||
| CDS GCA 90 bp | GCTGTGCCCTTCTCATTGACTTTGAATCCCATAGCATCTTGGATCTaGCGCCGGGTTTTCCCCGCTGTGGTCATCTGCAGCATAGCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: AVPFSLTLNPIASWI*RRVFPAVVICSIAS Trigger: GCTGGCTATGCTGCAGATGACCACAGCGGGGAAAACCCGGCGGCAGATCCAAGATGCTATGGGATTCAAAGTCAATGAGAAGGGCACAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
||
| CDS-3UTR CAA 90 bp | GCCACCCTCCACAGCAATGGCAGGCGATGCAAGAGGTGCCCACAGTGTGACTGGCCCTTCTCATTGACTTaGAATCCCATAGCATCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: ATLHSNGRRCKRCPQCDWPFSLT*NPIASW Trigger: CCAAGATGCTATGGGATTCAAAGTCAATGAGAAGGG...CCAGTCACACTGTGGGCACCTCTTGCATCGCCTGCCATTGCTGTGGAGGGTGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
||
| CDS-3UTR CAA 90 bp | AGGCTACCCAGAGGGGCAGGTTTGTGGAGTGATGCACCCCTGACATACAGGGATGTACTGATCTCATTCTaGTTCCACGGCCCCATGAGC | + |
|
Preference number: 5 (lower is better) Translates to: RLPRGAGLWSDAPLTYRDVLISF*FHGPMS Trigger: GCTCATGGGGCCGTGGAACAAGAATGAGATCAGTAC...ATCCCTGTATGTCAGGGGTGCATCACTCCACAAACCTGCCCCTCTGGGTAGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000041388.11 |
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| CDS CCA 90 bp | GAGAAGTCCACCTGTTTCACCATAGTCTGGAAGAGCTTGAAGAAGTaGGGCATGAAGCCCTGGACCAGCTCTAGGTCCCGCTGGACAAAG | + |
|
Preference number: 5 (lower is better) Translates to: EKSTCFTIVWKSLKK*GMKPWTSSRSRWTK Trigger: CTTTGTCCAGCGGGACCTAGAGCTGGTCCAGGGCTTCATGCCCCACTTCTTCAAGCTCTTCCAGACTATGGTGAAACAGGTGGACTTCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
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| CDS-3UTR CAA 90 bp | AGCAAGCTGTGTCAAGGGAGGGAGCAGGGAGAAGGCTCGCTATTGGGCCACCATTCACTGATCATACCTTaGGTATGCCTTTCCACCCAG | + |
|
Preference number: 5 (lower is better) Translates to: SKLCQGREQGEGSLLGHHSLIIP*VCLSTQ Trigger: CTGGGTGGAAAGGCATACCAAAGGTATGATCAGTGA...ATGGTGGCCCAATAGCGAGCCTTCTCCCTGCTCCCTCCCTTGACACAGCTTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
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| CDS-3UTR CAA 90 bp | ATGAAAGTGTTGTGCCCTCCACTCTGCTGGGGCCTCGGTGGGAACTGGGTCCAATCACTGATCATACCTTaGGTATGCCTTTCCACCCAG | + |
|
Preference number: 5 (lower is better) Translates to: MKVLCPPLCWGLGGNWVQSLIIP*VCLSTQ Trigger: CTGGGTGGAAAGGCATACCAAAGGTATGATCAGTGA...TTGGACCCAGTTCCCACCGAGGCCCCAGCAGAGTGGAGGGCACAACACTTTCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
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| CDS-3UTR CAA 90 bp | GCAATGGCAGGCGATGCAAGAGGTGCCCACAGTGTGACTGGAACACAAACGATTGGCAGCCTGGTCATGTaGCCCTTCCATTGTCTGATG | + |
|
Preference number: 5 (lower is better) Translates to: AMAGDARGAHSVTGTQTIGSLVM*PFHCLM Trigger: CATCAGACAATGGAAGGGCAACATGACCAGGCTGCC...AATCGTTTGTGTTCCAGTCACACTGTGGGCACCTCTTGCATCGCCTGCCATTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
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| CDS CCA 90 bp | TTGAAGAAGTGGGGCATGAAGCCCTGGACCAGCTCTAGGTCCCGCTaGACAAAGATGGCATCCGCAGTACTGATCTCATTCTTGTTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: LKKWGMKPWTSSRSR*TKMASAVLISFLFH Trigger: GTGGAACAAGAATGAGATCAGTACTGCGGATGCCATCTTTGTCCAGCGGGACCTAGAGCTGGTCCAGGGCTTCATGCCCCACTTCTTCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
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| CDS-3UTR CAA 90 bp | AGGCTACCCAGAGGGGCAGGTTTGTGGAGTGATGCACCCCTGACATACAGGGATGCTGTGCCCTTCTCATaGACTTTGAATCCCATAGCA | + |
|
Preference number: 5 (lower is better) Translates to: RLPRGAGLWSDAPLTYRDAVPFS*TLNPIA Trigger: TGCTATGGGATTCAAAGTCAATGAGAAGGGCACAGC...ATCCCTGTATGTCAGGGGTGCATCACTCCACAAACCTGCCCCTCTGGGTAGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041388.11 |
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| CDS-3UTR CAA 90 bp | ACCAGTGCAGCTCTGACTCACCCAGTAATTGGAGAAAGTTCTGTCCTGTTAGGTGTGCTGCCATCAGACTaGTGGAAGAGGCGCTGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: TSAALTHPVIGESSVLLGVLPSD*WKRRWW Trigger: CCACCAGCGCCTCTTCCACAAGTCTGATGGCAGCAC...ACCTAACAGGACAGAACTTTCTCCAATTACTGGGTGAGTCAGAGCTGCACTGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
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| CDS CCA 90 bp | CTGGCTCTTTCCACTTCTGAGAAGTCCACCTGTTTCACCATAGTCTaGAAGAGCTTGAAGAAGTGGGGCATGAAGCCCTGGACCAGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: LALSTSEKSTCFTIV*KSLKKWGMKPWTSS Trigger: AGAGCTGGTCCAGGGCTTCATGCCCCACTTCTTCAAGCTCTTCCAGACTATGGTGAAACAGGTGGACTTCTCAGAAGTGGAAAGAGCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
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| CDS-3UTR CAA 90 bp | ACAAACATACAAGAGCAAGAGATAAATATTCAATCACACCCCTGGAATCTCCCCGGCCCCATGAGCTCCTaGGAGAGCTGGCGGAGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: TNIQEQEINIQSHPWNLPGPMSS*ESWRRA Trigger: TGCCCTCCGCCAGCTCTCCAAGGAGCTCATGGGGCC...GGGGAGATTCCAGGGGTGTGATTGAATATTTATCTCTTGCTCTTGTATGTTTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
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| CDS-3UTR CAA 90 bp | ACGTGGGTTGCCAAGCATCACCTTGGCAAGGTCCCTAAGGAAAAGAGCCACGGGCTTTCCACCCAGTCATaGATGATAAATCTGGCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: TWVAKHHLGKVPKEKSHGLSTQS*MINLAL Trigger: AAGAGCCAGATTTATCATCAATGACTGGGTGGAAAG...CCCGTGGCTCTTTTCCTTAGGGACCTTGCCAAGGTGATGCTTGGCAACCCACGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041388.11 |
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| CDS-3UTR CAA 90 bp | TCACCCAGTAATTGGAGAAAGTTCTGTCCTGTTAGGTCACACAGCCCCTTTTCCGGCAGCCTGGTCATGTaGCCCTTCCATTGTCTGATG | + |
|
Preference number: 5 (lower is better) Translates to: SPSNWRKFCPVRSHSPFSGSLVM*PFHCLM Trigger: CATCAGACAATGGAAGGGCAACATGACCAGGCTGCC...GGAAAAGGGGCTGTGTGACCTAACAGGACAGAACTTTCTCCAATTACTGGGTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
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| CDS-3UTR CAA 90 bp | GTGAGTCACCAGTGCAGCTCTGACTCACCCAGTAATTGGAGAAAGTTCTGTCCTCTCGATCCTGACCTTTaGCAGTGCCTGTGCTACAGA | + |
|
Preference number: 5 (lower is better) Translates to: VSHQCSSDSPSNWRKFCPLDPDL*QCLCYR Trigger: TCTGTAGCACAGGCACTGCAAAAGGTCAGGATCGAG...AGGACAGAACTTTCTCCAATTACTGGGTGAGTCAGAGCTGCACTGGTGACTCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
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| CDS-3UTR CAA 90 bp | ACCAGTGCAGCTCTGACTCACCCAGTAATTGGAGAAAGTTCTGTCCTGTTAGGTGAATCCCATAGCATCTaGGATCTGCCGCCGGGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: TSAALTHPVIGESSVLLGESHSI*DLPPGF Trigger: AAAACCCGGCGGCAGATCCAAGATGCTATGGGATTC...ACCTAACAGGACAGAACTTTCTCCAATTACTGGGTGAGTCAGAGCTGCACTGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
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| CDS-3UTR CAA 90 bp | ACCAGTGCAGCTCTGACTCACCCAGTAATTGGAGAAAGTTCTGTCCTGTTAGGTGTACTGATCTCATTCTaGTTCCACGGCCCCATGAGC | + |
|
Preference number: 5 (lower is better) Translates to: TSAALTHPVIGESSVLLGVLISF*FHGPMS Trigger: GCTCATGGGGCCGTGGAACAAGAATGAGATCAGTAC...ACCTAACAGGACAGAACTTTCTCCAATTACTGGGTGAGTCAGAGCTGCACTGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
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| CDS-3UTR CAA 90 bp | ACCAGTGCAGCTCTGACTCACCCAGTAATTGGAGAAAGTTCTGTCCTGTTAGGTGAAAGGAGTCTTCCATaGGCCACTGAAGTAGAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: TSAALTHPVIGESSVLLGERSLP*ATEVEG Trigger: GCCCTCTACTTCAGTGGCCAATGGAAGACTCCTTTC...ACCTAACAGGACAGAACTTTCTCCAATTACTGGGTGAGTCAGAGCTGCACTGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
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| CDS-3UTR CAA 90 bp | GCAAGAGGTGCCCACAGTGTGACTGGAACACAAACGATTTTGCTGAATGAAAGTCTCGATCCTGACCTTTaGCAGTGCCTGTGCTACAGA | + |
|
Preference number: 5 (lower is better) Translates to: ARGAHSVTGTQTILLNESLDPDL*QCLCYR Trigger: TCTGTAGCACAGGCACTGCAAAAGGTCAGGATCGAG...ACTTTCATTCAGCAAAATCGTTTGTGTTCCAGTCACACTGTGGGCACCTCTTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
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| CDS-3UTR CAA 90 bp | GTCACCAGTGCAGCTCTGACTCACCCAGTAATTGGAGAAAGTTCTGTCCTGTTAATTGTCTCTGTCGGGTaGTGCCGAACCACAAAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: VTSAALTHPVIGESSVLLIVSVG*CRTTKR Trigger: TCTCTTTGTGGTTCGGCACAACCCGACAGAGACAAT...TAACAGGACAGAACTTTCTCCAATTACTGGGTGAGTCAGAGCTGCACTGGTGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
||
| CDS GCA 90 bp | TCTACAGCCCCCTTGGCCAGTAAGTCACTGATCATACCTTTGGTATaGCTTTCCACCCAGTCATTGATGATAAATCTGGCTCTTTCCACT | + |
|
Preference number: 5 (lower is better) Translates to: STAPLASKSLIIPLV*LSTQSLMINLALST Trigger: AGTGGAAAGAGCCAGATTTATCATCAATGACTGGGTGGAAAGGCATACCAAAGGTATGATCAGTGACTTACTGGCCAAGGGGGCTGTAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
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| CDS-3UTR CAA 90 bp | TCACCCAGTAATTGGAGAAAGTTCTGTCCTGTTAGGTCACACAGCCCCTTTTCCCTTTCCACCCAGTCATaGATGATAAATCTGGCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: SPSNWRKFCPVRSHSPFSLSTQS*MINLAL Trigger: AAGAGCCAGATTTATCATCAATGACTGGGTGGAAAG...GGAAAAGGGGCTGTGTGACCTAACAGGACAGAACTTTCTCCAATTACTGGGTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
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| CDS TCA 90 bp | CCTTTCCACCCAGTCATTGATGATAAATCTGGCTCTTTCCACTTCTaGGAAGTCCACCTGTTTCACCATAGTCTGGAAGAGCTTGAAGAA | + |
|
Preference number: 5 (lower is better) Translates to: PFHPVIDDKSGSFHF*EVHLFHHSLEELEE Trigger: TTCTTCAAGCTCTTCCAGACTATGGTGAAACAGGTGGACTTCTCAGAAGTGGAAAGAGCCAGATTTATCATCAATGACTGGGTGGAAAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
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| CDS-3UTR CAA 90 bp | ACAAACATACAAGAGCAAGAGATAAATATTCAATCACACCCCTGGAATCTCCCCCCCTTCTCATTGACTTaGAATCCCATAGCATCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: TNIQEQEINIQSHPWNLPPFSLT*NPIASW Trigger: CCAAGATGCTATGGGATTCAAAGTCAATGAGAAGGG...GGGGAGATTCCAGGGGTGTGATTGAATATTTATCTCTTGCTCTTGTATGTTTGT 42% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
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| CDS CAA 72 bp | GCCATCATGGGCACAGAGACGGTGCTGCCATCAGACTaGTGGAAGAGGCGCTGGTGGGTGCTGGCCTCTAAG | + |
|
Preference number: 6 (lower is better) Translates to: AIMGTETVLPSD*WKRRWWVLASK Trigger: CTTAGAGGCCAGCACCCACCAGCGCCTCTTCCACAAGTCTGATGGCAGCACCGTCTCTGTGCCCATGATGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
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| CDS CAA 90 bp | AGGTCCCGCTGGACAAAGATGGCATCCGCAGTACTGATCTCATTCTaGTTCCACGGCCCCATGAGCTCCTTGGAGAGCTGGCGGAGGGCA | + |
|
Preference number: 6 (lower is better) Translates to: RSRWTKMASAVLISF*FHGPMSSLESWRRA Trigger: TGCCCTCCGCCAGCTCTCCAAGGAGCTCATGGGGCCGTGGAACAAGAATGAGATCAGTACTGCGGATGCCATCTTTGTCCAGCGGGACCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
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| CDS TCA 72 bp | TCGGTCTATAACCATCTCCGTGGGGGCCATGCGGGCTaGGATGACAAAGGCTGTGGAGGAAGACGCCACTGT | + |
|
Preference number: 6 (lower is better) Translates to: SVYNHLRGGHAG*DDKGCGGRRHC Trigger: ACAGTGGCGTCTTCCTCCACAGCCTTTGTCATCTCAGCCCGCATGGCCCCCACGGAGATGGTTATAGACCGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
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| CDS CCA 72 bp | GGACCACCTGCTGAAACACTTTTACTCCGAAGTCGGTaGCCTGATGGGCTGTGTGGGATTCTCGGAGGGGTA | + |
|
Preference number: 6 (lower is better) Translates to: GPPAETLLLRSR*PDGLCGILGGV Trigger: TACCCCTCCGAGAATCCCACACAGCCCATCAGGCCACCGACTTCGGAGTAAAAGTGTTTCAGCAGGTGGTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
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| CDS CCA 72 bp | TGGGGCATGAAGCCCTGGACCAGCTCTAGGTCCCGCTaGACAAAGATGGCATCCGCAGTACTGATCTCATTC | + |
|
Preference number: 6 (lower is better) Translates to: WGMKPWTSSRSR*TKMASAVLISF Trigger: GAATGAGATCAGTACTGCGGATGCCATCTTTGTCCAGCGGGACCTAGAGCTGGTCCAGGGCTTCATGCCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
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| CDS CCA 72 bp | ACGGTGCTGCCATCAGACTTGTGGAAGAGGCGCTGGTaGGTGCTGGCCTCTAAGAAAGGAGTCTTCCATTGG | + |
|
Preference number: 6 (lower is better) Translates to: TVLPSDLWKRRW*VLASKKGVFHW Trigger: CCAATGGAAGACTCCTTTCTTAGAGGCCAGCACCCACCAGCGCCTCTTCCACAAGTCTGATGGCAGCACCGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
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| CDS CCA 72 bp | GAGACGGTGCTGCCATCAGACTTGTGGAAGAGGCGCTaGTGGGTGCTGGCCTCTAAGAAAGGAGTCTTCCAT | + |
|
Preference number: 6 (lower is better) Translates to: ETVLPSDLWKRR*WVLASKKGVFH Trigger: ATGGAAGACTCCTTTCTTAGAGGCCAGCACCCACCAGCGCCTCTTCCACAAGTCTGATGGCAGCACCGTCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
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| CDS CCA 72 bp | ATCATGGGCACAGAGACGGTGCTGCCATCAGACTTGTaGAAGAGGCGCTGGTGGGTGCTGGCCTCTAAGAAA | + |
|
Preference number: 6 (lower is better) Translates to: IMGTETVLPSDL*KRRWWVLASKK Trigger: TTTCTTAGAGGCCAGCACCCACCAGCGCCTCTTCCACAAGTCTGATGGCAGCACCGTCTCTGTGCCCATGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
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| CDS CAA 90 bp | AGGGCATTCACCAGCACCAGGCGTGTCAGCTCGTCTACAGCCCCCTaGGCCAGTAAGTCACTGATCATACCTTTGGTATGCCTTTCCACC | + |
|
Preference number: 6 (lower is better) Translates to: RAFTSTRRVSSSTAP*ASKSLIIPLVCLST Trigger: GGTGGAAAGGCATACCAAAGGTATGATCAGTGACTTACTGGCCAAGGGGGCTGTAGACGAGCTGACACGCCTGGTGCTGGTGAATGCCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
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| CDS CCA 72 bp | ACCTGTTTCACCATAGTCTGGAAGAGCTTGAAGAAGTaGGGCATGAAGCCCTGGACCAGCTCTAGGTCCCGC | + |
|
Preference number: 6 (lower is better) Translates to: TCFTIVWKSLKK*GMKPWTSSRSR Trigger: GCGGGACCTAGAGCTGGTCCAGGGCTTCATGCCCCACTTCTTCAAGCTCTTCCAGACTATGGTGAAACAGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
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| CDS CAA 72 bp | ACCAGCACCAGGCGTGTCAGCTCGTCTACAGCCCCCTaGGCCAGTAAGTCACTGATCATACCTTTGGTATGC | + |
|
Preference number: 6 (lower is better) Translates to: TSTRRVSSSTAP*ASKSLIIPLVC Trigger: GCATACCAAAGGTATGATCAGTGACTTACTGGCCAAGGGGGCTGTAGACGAGCTGACACGCCTGGTGCTGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
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| CDS CAA 90 bp | GGCATGAGCTGTGCCCTTCTCATTGACTTTGAATCCCATAGCATCTaGGATCTGCCGCCGGGTTTTCCCCGCTGTGGTCATCTGCAGCAT | + |
|
Preference number: 6 (lower is better) Translates to: GMSCALLIDFESHSI*DLPPGFPRCGHLQH Trigger: ATGCTGCAGATGACCACAGCGGGGAAAACCCGGCGGCAGATCCAAGATGCTATGGGATTCAAAGTCAATGAGAAGGGCACAGCTCATGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
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| CDS CAA 90 bp | TCCACTTCTGAGAAGTCCACCTGTTTCACCATAGTCTGGAAGAGCTaGAAGAAGTGGGGCATGAAGCCCTGGACCAGCTCTAGGTCCCGC | + |
|
Preference number: 6 (lower is better) Translates to: STSEKSTCFTIVWKS*KKWGMKPWTSSRSR Trigger: GCGGGACCTAGAGCTGGTCCAGGGCTTCATGCCCCACTTCTTCAAGCTCTTCCAGACTATGGTGAAACAGGTGGACTTCTCAGAAGTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
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| CDS TCA 72 bp | TGCTGGCCTCTAAGAAAGGAGTCTTCCATTGGCCACTaGAGTAGAGGGCATTCACCAGCACCAGGCGTGTCA | + |
|
Preference number: 6 (lower is better) Translates to: CWPLRKESSIGH*SRGHSPAPGVS Trigger: TGACACGCCTGGTGCTGGTGAATGCCCTCTACTTCAGTGGCCAATGGAAGACTCCTTTCTTAGAGGCCAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
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| CDS CCA 72 bp | GTGCCCTTCTCATTGACTTTGAATCCCATAGCATCTTaGATCTGCCGCCGGGTTTTCCCCGCTGTGGTCATC | + |
|
Preference number: 6 (lower is better) Translates to: VPFSLTLNPIAS*ICRRVFPAVVI Trigger: GATGACCACAGCGGGGAAAACCCGGCGGCAGATCCAAGATGCTATGGGATTCAAAGTCAATGAGAAGGGCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
||
| CDS CAA 72 bp | TGGACAAAGATGGCATCCGCAGTACTGATCTCATTCTaGTTCCACGGCCCCATGAGCTCCTTGGAGAGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: WTKMASAVLISF*FHGPMSSLESW Trigger: CCAGCTCTCCAAGGAGCTCATGGGGCCGTGGAACAAGAATGAGATCAGTACTGCGGATGCCATCTTTGTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
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| CDS GCA 72 bp | TTCTCATTGACTTTGAATCCCATAGCATCTTGGATCTaGCGCCGGGTTTTCCCCGCTGTGGTCATCTGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: FSLTLNPIASWI*RRVFPAVVICS Trigger: GCTGCAGATGACCACAGCGGGGAAAACCCGGCGGCAGATCCAAGATGCTATGGGATTCAAAGTCAATGAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
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| CDS CCA 72 bp | ACACGCCATAGGGAGAGAAGACCACATTCCGGTCTTTaGAGGCCTGGACCACCTGCTGAAACACTTTTACTC | + |
|
Preference number: 6 (lower is better) Translates to: TRHRERRPHSGL*RPGPPAETLLL Trigger: GAGTAAAAGTGTTTCAGCAGGTGGTCCAGGCCTCCAAAGACCGGAATGTGGTCTTCTCTCCCTATGGCGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
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| CDS CAA 72 bp | TGTGCCCTTCTCATTGACTTTGAATCCCATAGCATCTaGGATCTGCCGCCGGGTTTTCCCCGCTGTGGTCAT | + |
|
Preference number: 6 (lower is better) Translates to: CALLIDFESHSI*DLPPGFPRCGH Trigger: ATGACCACAGCGGGGAAAACCCGGCGGCAGATCCAAGATGCTATGGGATTCAAAGTCAATGAGAAGGGCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
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| CDS CAA 72 bp | GAGAAGTCCACCTGTTTCACCATAGTCTGGAAGAGCTaGAAGAAGTGGGGCATGAAGCCCTGGACCAGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: EKSTCFTIVWKS*KKWGMKPWTSS Trigger: AGAGCTGGTCCAGGGCTTCATGCCCCACTTCTTCAAGCTCTTCCAGACTATGGTGAAACAGGTGGACTTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
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| CDS CAA 90 bp | GTCATGTTGCCCTTCCATTGTCTGATGAGTTCAGCATCCAAGATGTaGGTGAGGGCGGAGAGGTGCACATCTTTCTCAAAGGGTGCAGCG | + |
|
Preference number: 6 (lower is better) Translates to: VMLPFHCLMSSASKM*VRAERCTSFSKGAA Trigger: CGCTGCACCCTTTGAGAAAGATGTGCACCTCTCCGCCCTCACCAACATCTTGGATGCTGAACTCATCAGACAATGGAAGGGCAACATGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
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| CDS TCA 72 bp | TCAGCTCGTCTACAGCCCCCTTGGCCAGTAAGTCACTaGTCATACCTTTGGTATGCCTTTCCACCCAGTCAT | + |
|
Preference number: 6 (lower is better) Translates to: SARLQPPWPVSH*SYLWYAFPPSH Trigger: ATGACTGGGTGGAAAGGCATACCAAAGGTATGATCAGTGACTTACTGGCCAAGGGGGCTGTAGACGAGCTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
||
| CDS GCA 72 bp | AGTTCAGCATCCAAGATGTTGGTGAGGGCGGAGAGGTaGACATCTTTCTCAAAGGGTGCAGCGATGAACATG | + |
|
Preference number: 6 (lower is better) Translates to: SSASKMLVRAER*TSFSKGAAMNM Trigger: CATGTTCATCGCTGCACCCTTTGAGAAAGATGTGCACCTCTCCGCCCTCACCAACATCTTGGATGCTGAACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
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| CDS GCA 72 bp | ACTTGGCCCATGAAGAGGATTGTCTCTGTCGGGTTGTaGCGAACCACAAAGAGAAAGGATCGGTCTATAACC | + |
|
Preference number: 6 (lower is better) Translates to: TWPMKRIVSVGL*RTTKRKDRSIT Trigger: GGTTATAGACCGATCCTTTCTCTTTGTGGTTCGGCACAACCCGACAGAGACAATCCTCTTCATGGGCCAAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
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| CDS CAA 72 bp | ATCACTTGGCCCATGAAGAGGATTGTCTCTGTCGGGTaGTGCCGAACCACAAAGAGAAAGGATCGGTCTATA | + |
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Preference number: 6 (lower is better) Translates to: ITWPMKRIVSVG*CRTTKRKDRSI Trigger: TATAGACCGATCCTTTCTCTTTGTGGTTCGGCACAACCCGACAGAGACAATCCTCTTCATGGGCCAAGTGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
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| CDS CAA 90 bp | AGCTCGTCTACAGCCCCCTTGGCCAGTAAGTCACTGATCATACCTTaGGTATGCCTTTCCACCCAGTCATTGATGATAAATCTGGCTCTT | + |
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Preference number: 6 (lower is better) Translates to: SSSTAPLASKSLIIP*VCLSTQSLMINLAL Trigger: AAGAGCCAGATTTATCATCAATGACTGGGTGGAAAGGCATACCAAAGGTATGATCAGTGACTTACTGGCCAAGGGGGCTGTAGACGAGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
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| CDS GCA 72 bp | CCCTTGGCCAGTAAGTCACTGATCATACCTTTGGTATaGCTTTCCACCCAGTCATTGATGATAAATCTGGCT | + |
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Preference number: 6 (lower is better) Translates to: PLASKSLIIPLV*LSTQSLMINLA Trigger: AGCCAGATTTATCATCAATGACTGGGTGGAAAGGCATACCAAAGGTATGATCAGTGACTTACTGGCCAAGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
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| CDS TCA 72 bp | CCAGTCATTGATGATAAATCTGGCTCTTTCCACTTCTaGGAAGTCCACCTGTTTCACCATAGTCTGGAAGAG | + |
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Preference number: 6 (lower is better) Translates to: PVIDDKSGSFHF*EVHLFHHSLEE Trigger: CTCTTCCAGACTATGGTGAAACAGGTGGACTTCTCAGAAGTGGAAAGAGCCAGATTTATCATCAATGACTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
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| CDS CAA 90 bp | AGTAAGTCACTGATCATACCTTTGGTATGCCTTTCCACCCAGTCATaGATGATAAATCTGGCTCTTTCCACTTCTGAGAAGTCCACCTGT | + |
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Preference number: 6 (lower is better) Translates to: SKSLIIPLVCLSTQS*MINLALSTSEKSTC Trigger: ACAGGTGGACTTCTCAGAAGTGGAAAGAGCCAGATTTATCATCAATGACTGGGTGGAAAGGCATACCAAAGGTATGATCAGTGACTTACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041388.11 ENSMUST00000077523.4 |
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