Pregenerated sensors for SERPINC1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026715Ensembl transcript IDs: ENSMUST00000064725.11, ENSMUST00000191936.2, ENSMUST00000194455.2, ENSMUST00000194592.2, ENSMUST00000195438.6, ENSMUST00000195760.2
Found 209 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGCACCATGGTGATGTCATCCCCCTTGAAGGGCAGCTCTAGCACCTaGGTGCCCTCTGCCACGCGCCGGTATTTGAATTTGCCTTCCTGG | + |
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Preference number: 1 (lower is better) Translates to: STMVMSSPLKGSSST*VPSATRRYLNLPSW Trigger: CCAGGAAGGCAAATTCAAATACCGGCGCGTGGCAGAGGGCACCCAGGTGCTAGAGCTGCCCTTCAAGGGGGATGACATCACCATGGTGCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000194455.2 |
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| 3UTR CCA 90 bp | TGCTCCTTCAGACTGAAGCCATCCTCGGTGCGGAAGCGGGGCATGTaGACCACAAGCATAGTCTCTGACAGCTCATCCAGCCACTCCTGC | + |
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Preference number: 1 (lower is better) Translates to: CSFRLKPSSVRKRGM*TTSIVSDSSSSHSC Trigger: GCAGGAGTGGCTGGATGAGCTGTCAGAGACTATGCTTGTGGTCCACATGCCCCGCTTCCGCACCGAGGATGGCTTCAGTCTGAAGGAGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194455.2 |
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| 3UTR GCA 90 bp | CCCTGGTCCTTGAGGAAAACAAGTGCCATCTATAGGCCAAGGAAGTaGGCTCTGTGCTCCCAGGGTCCGTTTTCACCTGCTGGTCTGCTC | + |
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Preference number: 1 (lower is better) Translates to: PWSLRKTSAIYRPRK*ALCSQGPFSPAGLL Trigger: GAGCAGACCAGCAGGTGAAAACGGACCCTGGGAGCACAGAGCGCACTTCCTTGGCCTATAGATGGCACTTGTTTTCCTCAAGGACCAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064725.11 |
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| 3UTR GCA 90 bp | GACTTTTCAGGGCTGAAGAGATCAATGAGGCCCATGTCTTGCAGCTaGTCCTTCAGACTGAAGCCATCCTCGGTGCGGAAGCGGGGCATG | + |
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Preference number: 1 (lower is better) Translates to: DFSGLKRSMRPMSCS*SFRLKPSSVRKRGM Trigger: CATGCCCCGCTTCCGCACCGAGGATGGCTTCAGTCTGAAGGAGCAGCTGCAAGACATGGGCCTCATTGATCTCTTCAGCCCTGAAAAGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000194455.2 |
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| 3UTR TCA 90 bp | TCCCGGCTACCTGTCCCTGGCACTGTGCCTTCCCACTGGTCACTGTaGAAAATAGATCACACTGGACTCAGAGGCCAGAACCCAGGACAA | + |
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Preference number: 1 (lower is better) Translates to: SRLPVPGTVPSHWSL*KIDHTGLRGQNPGQ Trigger: TTGTCCTGGGTTCTGGCCTCTGAGTCCAGTGTGATCTATTTTTCACAGTGACCAGTGGGAAGGCACAGTGCCAGGGACAGGTAGCCGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064725.11 |
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| 3UTR TCA 90 bp | CAGGAAGGGCCTGTTGGCCTTGAAGGTCACCCTATTGGGGTTCAGTaGCCGGCCAGTAATCACGACAGAAGTACTCGCTGCTGCTTCACT | + |
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Preference number: 1 (lower is better) Translates to: QEGPVGLEGHPIGVQ*PASNHDRSTRCCFT Trigger: AGTGAAGCAGCAGCGAGTACTTCTGTCGTGATTACTGGCCGGTCACTGAACCCCAATAGGGTGACCTTCAAGGCCAACAGGCCCTTCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194455.2 |
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| 3UTR CCA 90 bp | TGCATTGGCAGAGCGCTTACATTTCCTGGTGCCTGTTGTTTAGGATaGGCTACTCTGGCACTGCCTGTGAAAGGCAGAGGAGGTGAGGGC | + |
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Preference number: 1 (lower is better) Translates to: CIGRALTFPGACCLG*ATLALPVKGRGGEG Trigger: GCCCTCACCTCCTCTGCCTTTCACAGGCAGTGCCAGAGTAGCCCATCCTAAACAACAGGCACCAGGAAATGTAAGCGCTCTGCCAATGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064725.11 |
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| 3UTR TCA 90 bp | ACATCTAAGTACTGGGCTTGGTTCCCCCTGTGTGACAGGGGACCCTaGCTCTCCTCCTGTAGATTCTGTCTTTCCCTGGACAAGCCAATC | + |
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Preference number: 1 (lower is better) Translates to: TSKYWAWFPLCDRGP*LSSCRFCLSLDKPI Trigger: GATTGGCTTGTCCAGGGAAAGACAGAATCTACAGGAGGAGAGTCAGGGTCCCCTGTCACACAGGGGGAACCAAGCCCAGTACTTAGATGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000064725.11 |
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| 3UTR GCA 90 bp | CAGCGCTCTGCACTGAGGGTTCTCAGTCTCCCTAGTGAGGGAAAGTaGATTGGCAGAGCGCTTACATTTCCTGGTGCCTGTTGTTTAGGA | + |
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Preference number: 1 (lower is better) Translates to: QRSALRVLSLPSEGK*IGRALTFPGACCLG Trigger: TCCTAAACAACAGGCACCAGGAAATGTAAGCGCTCTGCCAATGCACTTTCCCTCACTAGGGAGACTGAGAACCCTCAGTGCAGAGCGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064725.11 |
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| 3UTR GCA 90 bp | TTGAGGAAAACAAGTGCCATCTATAGGCCAAGGAAGTGCGCTCTGTaGTCCCAGGGTCCGTTTTCACCTGCTGGTCTGCTCACAGCTTTG | + |
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Preference number: 1 (lower is better) Translates to: LRKTSAIYRPRKCAL*SQGPFSPAGLLTAL Trigger: CAAAGCTGTGAGCAGACCAGCAGGTGAAAACGGACCCTGGGAGCACAGAGCGCACTTCCTTGGCCTATAGATGGCACTTGTTTTCCTCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064725.11 |
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| 3UTR GCA 90 bp | GAACTGTCATTCCAGATCCAAATCTTTCTGCAACAGCTAAGCAAGTaGTGGTCTGATCCCAGTGTGACCCCCTCGCTCCATCCCCTGGTC | + |
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Preference number: 1 (lower is better) Translates to: ELSFQIQIFLQQLSK*WSDPSVTPSLHPLV Trigger: GACCAGGGGATGGAGCGAGGGGGTCACACTGGGATCAGACCAGCACTTGCTTAGCTGTTGCAGAAAGATTTGGATCTGGAATGACAGTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000064725.11 |
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| 3UTR CCA 90 bp | GGTGCTTATTTAACGGGTGACAGCTGTCTCCCGGCTACCTGTCCCTaGCACTGTGCCTTCCCACTGGTCACTGTGAAAAATAGATCACAC | + |
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Preference number: 1 (lower is better) Translates to: GAYLTGDSCLPATCP*HCAFPLVTVKNRSH Trigger: GTGTGATCTATTTTTCACAGTGACCAGTGGGAAGGCACAGTGCCAGGGACAGGTAGCCGGGAGACAGCTGTCACCCGTTAAATAAGCACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064725.11 |
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| 3UTR CCA 90 bp | GCCAAGGAAGTGCGCTCTGTGCTCCCAGGGTCCGTTTTCACCTGCTaGTCTGCTCACAGCTTTGGCCTCCTCACTGTTTTATGTTCTAAT | + |
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Preference number: 1 (lower is better) Translates to: AKEVRSVLPGSVFTC*SAHSFGLLTVLCSN Trigger: ATTAGAACATAAAACAGTGAGGAGGCCAAAGCTGTGAGCAGACCAGCAGGTGAAAACGGACCCTGGGAGCACAGAGCGCACTTCCTTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064725.11 |
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| 3UTR CCA 90 bp | CTGTCATTCCAGATCCAAATCTTTCTGCAACAGCTAAGCAAGTGCTaGTCTGATCCCAGTGTGACCCCCTCGCTCCATCCCCTGGTCCTT | + |
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Preference number: 1 (lower is better) Translates to: LSFQIQIFLQQLSKC*SDPSVTPSLHPLVL Trigger: AAGGACCAGGGGATGGAGCGAGGGGGTCACACTGGGATCAGACCAGCACTTGCTTAGCTGTTGCAGAAAGATTTGGATCTGGAATGACAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000064725.11 |
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| 3UTR CCA 90 bp | TGGCACTGTGCCTTCCCACTGGTCACTGTGAAAAATAGATCACACTaGACTCAGAGGCCAGAACCCAGGACAAGATCCCTCTTCTTCTCT | + |
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Preference number: 1 (lower is better) Translates to: WHCAFPLVTVKNRSH*TQRPEPRTRSLFFS Trigger: AGAGAAGAAGAGGGATCTTGTCCTGGGTTCTGGCCTCTGAGTCCAGTGTGATCTATTTTTCACAGTGACCAGTGGGAAGGCACAGTGCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064725.11 |
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| 3UTR GCA 90 bp | TGGCTGAAGCCAGATCACTCAGGAGGGAAGCTGAGGGAAAACTGTTaGCAGACCTTGTTGGGTTTAACCACATTTCTTTGTCCTTTACCC | + |
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Preference number: 1 (lower is better) Translates to: WLKPDHSGGKLRENC*QTLLGLTTFLCPLP Trigger: GGGTAAAGGACAAAGAAATGTGGTTAAACCCAACAAGGTCTGGCAACAGTTTTCCCTCAGCTTCCCTCCTGAGTGATCTGGCTTCAGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064725.11 |
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| 3UTR GCA 90 bp | CACACAAGGATTAGCCACTCTCCCCATGAATATAATAGTGTTCAGTaGAACTTCCCTTATAAGAACCAGGAAGGGCCTGTTGGCCTTGAA | + |
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Preference number: 1 (lower is better) Translates to: HTRISHSPHEYNSVQ*NFPYKNQEGPVGLE Trigger: TTCAAGGCCAACAGGCCCTTCCTGGTTCTTATAAGGGAAGTTGCACTGAACACTATTATATTCATGGGGAGAGTGGCTAATCCTTGTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194455.2 |
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| 3UTR TCA 90 bp | CACATTACGAAATCACAAAAAGATTTCACTTCAGCTGCTATTGAGTaGCAGTGGGAATCAAACTGCAGCCTCCTCCAGTTTCTGAAGCTG | + |
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Preference number: 1 (lower is better) Translates to: HITKSQKDFTSAAIE*QWESNCSLLQFLKL Trigger: CAGCTTCAGAAACTGGAGGAGGCTGCAGTTTGATTCCCACTGTCACTCAATAGCAGCTGAAGTGAAATCTTTTTGTGATTTCGTAATGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064725.11 |
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| 3UTR GCA 90 bp | GTGCTGGAGAACATGGTGGAGTACTGTGAAACTTTATGCAGTTTATaGAAATTATACCACACTGGACAAAACACAAAGGTGGGGAGTGGT | + |
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Preference number: 1 (lower is better) Translates to: VLENMVEYCETLCSL*KLYHTGQNTKVGSG Trigger: ACCACTCCCCACCTTTGTGTTTTGTCCAGTGTGGTATAATTTGCATAAACTGCATAAAGTTTCACAGTACTCCACCATGTTCTCCAGCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064725.11 |
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| 3UTR TCA 90 bp | ACAGCAATGCAGCAGACCTTTGATTCCCTTCAGATGGACCTATTCTaGAGGAAGGAACGATATCCAACTCTTTTCTCTGGTGCTTATTTA | + |
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Preference number: 1 (lower is better) Translates to: TAMQQTFDSLQMDLF*RKERYPTLFSGAYL Trigger: TAAATAAGCACCAGAGAAAAGAGTTGGATATCGTTCCTTCCTTCAGAATAGGTCCATCTGAAGGGAATCAAAGGTCTGCTGCATTGCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064725.11 |
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| 3UTR GCA 90 bp | GGGATGTTCGTGCTGGAGAACATGGTGGAGTACTGTGAAACTTTATaGAGTTTATGCAAATTATACCACACTGGACAAAACACAAAGGTG | + |
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Preference number: 1 (lower is better) Translates to: GMFVLENMVEYCETL*SLCKLYHTGQNTKV Trigger: CACCTTTGTGTTTTGTCCAGTGTGGTATAATTTGCATAAACTGCATAAAGTTTCACAGTACTCCACCATGTTCTCCAGCACGAACATCCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064725.11 |
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| 3UTR TCA 90 bp | TCTGTACTCCAGTCTCTCGTCTTCAAGTGGAAAAGTCCATTCTCGTaGGGTGGCAGTCGTATTTATTTTTACTTCTATTCACAAACACCA | + |
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Preference number: 1 (lower is better) Translates to: SVLQSLVFKWKSPFS*GGSRIYFYFYSQTP Trigger: TGGTGTTTGTGAATAGAAGTAAAAATAAATACGACTGCCACCTCACGAGAATGGACTTTTCCACTTGAAGACGAGAGACTGGAGTACAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000064725.11 |
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| 3UTR TCA 90 bp | TTGTCACATTACGAAATCACAAAAAGATTTCACTTCAGCTGCTATTaGGTGACAGTGGGAATCAAACTGCAGCCTCCTCCAGTTTCTGAA | + |
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Preference number: 1 (lower is better) Translates to: LSHYEITKRFHFSCY*VTVGIKLQPPPVSE Trigger: TTCAGAAACTGGAGGAGGCTGCAGTTTGATTCCCACTGTCACTCAATAGCAGCTGAAGTGAAATCTTTTTGTGATTTCGTAATGTGACAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064725.11 |
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| 3UTR TCA 90 bp | GTTTCTAGAAGGGATGTTCGTGCTGGAGAACATGGTGGAGTACTGTaGAACTTTATGCAGTTTATGCAAATTATACCACACTGGACAAAA | + |
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Preference number: 1 (lower is better) Translates to: VSRRDVRAGEHGGVL*NFMQFMQIIPHWTK Trigger: TTTTGTCCAGTGTGGTATAATTTGCATAAACTGCATAAAGTTTCACAGTACTCCACCATGTTCTCCAGCACGAACATCCCTTCTAGAAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064725.11 |
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| 3UTR-3UTR GCA 90 bp | CTCCTTCAGACTGAAGCCATCCTCGGTGCGGAAGCGGGGCATGTGGACCACAAGGCTCTAGCACCTGGGTaGCCTCTGCCACGCGCCGGT | + |
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Preference number: 2 (lower is better) Translates to: LLQTEAILGAEAGHVDHKALAPG*PLPRAG Trigger: ACCGGCGCGTGGCAGAGGGCACCCAGGTGCTAGAGC...CTTGTGGTCCACATGCCCCGCTTCCGCACCGAGGATGGCTTCAGTCTGAAGGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194455.2 |
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| 3UTR CAA 90 bp | TTCTCAGGCTTGGGCAGGATGAGCACCATGGTGATGTCATCCCCCTaGAAGGGCAGCTCTAGCACCTGGGTGCCCTCTGCCACGCGCCGG | + |
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Preference number: 2 (lower is better) Translates to: FSGLGRMSTMVMSSP*KGSSSTWVPSATRR Trigger: CCGGCGCGTGGCAGAGGGCACCCAGGTGCTAGAGCTGCCCTTCAAGGGGGATGACATCACCATGGTGCTCATCCTGCCCAAGCCTGAGAA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000194455.2 |
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| 3UTR CAA 90 bp | TCTGGGGTGAGCTCCTGCTCCACCTTGGCCAGGCTCTTCTCAGGCTaGGGCAGGATGAGCACCATGGTGATGTCATCCCCCTTGAAGGGC | + |
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Preference number: 2 (lower is better) Translates to: SGVSSCSTLARLFSG*GRMSTMVMSSPLKG Trigger: GCCCTTCAAGGGGGATGACATCACCATGGTGCTCATCCTGCCCAAGCCTGAGAAGAGCCTGGCCAAGGTGGAGCAGGAGCTCACCCCAGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000194455.2 |
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| 3UTR-3UTR CCA 90 bp | ATAAGAACCAGGAAGGGCCTGTTGGCCTTGAAGGTCACCCTATTGGGGTTCAGTGGCAGCTCTAGCACCTaGGTGCCCTCTGCCACGCGC | + |
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Preference number: 2 (lower is better) Translates to: IRTRKGLLALKVTLLGFSGSSST*VPSATR Trigger: GCGCGTGGCAGAGGGCACCCAGGTGCTAGAGCTGCC...ACTGAACCCCAATAGGGTGACCTTCAAGGCCAACAGGCCCTTCCTGGTTCTTAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194455.2 |
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| 3UTR-3UTR CCA 90 bp | CCTCAAGAAATGCTTTGTGGAATGCGTCGGAGACATAGAGGTCGTCCCTGCCTCCTCCTGCAGCAGCTCTaGGGTGAGCTCCTGCTCCAC | + |
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Preference number: 2 (lower is better) Translates to: PQEMLCGMRRRHRGRPCLLLQQL*GELLLH Trigger: GTGGAGCAGGAGCTCACCCCAGAGCTGCTGCAGGAG...GAGGCAGGGACGACCTCTATGTCTCCGACGCATTCCACAAAGCATTTCTTGAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194455.2 |
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| 3UTR-3UTR GCA 90 bp | TTGGCCTTGAAGGTCACCCTATTGGGGTTCAGTGACCGGCCAGTAATCACGACATCATCCAGCCACTCCTaGAGCAGCTCTGGGGTGAGC | + |
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Preference number: 2 (lower is better) Translates to: LALKVTLLGFSDRPVITTSSSHS*SSSGVS Trigger: GCTCACCCCAGAGCTGCTGCAGGAGTGGCTGGATGA...TGTCGTGATTACTGGCCGGTCACTGAACCCCAATAGGGTGACCTTCAAGGCCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000194455.2 |
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| 3UTR-3UTR TCA 90 bp | TCTGCACTGAGGGTTCTCAGTCTCCCTAGTGAGGGAAAGTGCATTGGCAGAGCGCCTAAGGAGTGTGGCTaGAGCCAGATCACTCAGGAG | + |
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Preference number: 2 (lower is better) Translates to: SALRVLSLPSEGKCIGRAPKECG*SQITQE Trigger: CTCCTGAGTGATCTGGCTTCAGCCACACTCCTTAGG...CGCTCTGCCAATGCACTTTCCCTCACTAGGGAGACTGAGAACCCTCAGTGCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064725.11 |
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| 3UTR-3UTR TCA 90 bp | CCCTGGGAGTTGGGACTTTTCAGGGCTGAAGAGATCAATGAGGCCCATGTCTTGCACAAGCATAGTCTCTaGCAGCTCATCCAGCCACTC | + |
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Preference number: 2 (lower is better) Translates to: PWELGLFRAEEINEAHVLHKHSL*QLIQPL Trigger: GAGTGGCTGGATGAGCTGTCAGAGACTATGCTTGTG...CAAGACATGGGCCTCATTGATCTCTTCAGCCCTGAAAAGTCCCAACTCCCAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194455.2 |
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| 3UTR-3UTR GCA 90 bp | TCTGCACTGAGGGTTCTCAGTCTCCCTAGTGAGGGAAAGTGCATTGGCAGAGCGCATAGGCTAGGCAGCTaGTGCTCCAGGATCAGATAT | + |
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Preference number: 2 (lower is better) Translates to: SALRVLSLPSEGKCIGRAHRLGS*CSRIRY Trigger: ATATCTGATCCTGGAGCAGCAGCTGCCTAGCCTATG...CGCTCTGCCAATGCACTTTCCCTCACTAGGGAGACTGAGAACCCTCAGTGCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064725.11 |
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| 3UTR-3UTR GCA 90 bp | AGGAAGGGCCTGTTGGCCTTGAAGGTCACCCTATTGGGGTTCAGTGACCGGCCAAAATGCTTTGTGGAATaGGTCGGAGACATAGAGGTC | + |
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Preference number: 2 (lower is better) Translates to: RKGLLALKVTLLGFSDRPKCFVE*VGDIEV Trigger: GACCTCTATGTCTCCGACGCATTCCACAAAGCATTT...TGGCCGGTCACTGAACCCCAATAGGGTGACCTTCAAGGCCAACAGGCCCTTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000194455.2 |
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| 3UTR CAA 90 bp | CTTATAAGAACCAGGAAGGGCCTGTTGGCCTTGAAGGTCACCCTATaGGGGTTCAGTGACCGGCCAGTAATCACGACAGAAGTACTCGCT | + |
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Preference number: 2 (lower is better) Translates to: LIRTRKGLLALKVTL*GFSDRPVITTEVLA Trigger: AGCGAGTACTTCTGTCGTGATTACTGGCCGGTCACTGAACCCCAATAGGGTGACCTTCAAGGCCAACAGGCCCTTCCTGGTTCTTATAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194455.2 |
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| 3UTR CAA 90 bp | TTCAGTGCAACTTCCCTTATAAGAACCAGGAAGGGCCTGTTGGCCTaGAAGGTCACCCTATTGGGGTTCAGTGACCGGCCAGTAATCACG | + |
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Preference number: 2 (lower is better) Translates to: FSATSLIRTRKGLLA*KVTLLGFSDRPVIT Trigger: CGTGATTACTGGCCGGTCACTGAACCCCAATAGGGTGACCTTCAAGGCCAACAGGCCCTTCCTGGTTCTTATAAGGGAAGTTGCACTGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194455.2 |
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| 3UTR-3UTR TCA 90 bp | GCCTTCCCACTGGTCACTGTGAAAAATAGATCACACTGGACTCAGAGGCCAGAATGTGACAGGGGACCCTaGCTCTCCTCCTGTAGATTC | + |
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Preference number: 2 (lower is better) Translates to: AFPLVTVKNRSHWTQRPECDRGP*LSSCRF Trigger: GAATCTACAGGAGGAGAGTCAGGGTCCCCTGTCACA...TTCTGGCCTCTGAGTCCAGTGTGATCTATTTTTCACAGTGACCAGTGGGAAGGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000064725.11 |
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| 3UTR-3UTR TCA 90 bp | CCACTGGTCACTGTGAAAAATAGATCACACTGGACTCAGAGGCCAGAACCCAGGACTCAGGAGGGAAGCTaGGGGAAAACTGTTGCCAGA | + |
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Preference number: 2 (lower is better) Translates to: PLVTVKNRSHWTQRPEPRTQEGS*GKTVAR Trigger: TCTGGCAACAGTTTTCCCTCAGCTTCCCTCCTGAGT...CCTGGGTTCTGGCCTCTGAGTCCAGTGTGATCTATTTTTCACAGTGACCAGTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000064725.11 |
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| 3UTR-3UTR TCA 90 bp | ATAATAGTGTTCAGTGCAACTTCCCTTATAAGAACCAGGAAGGGCCTGTTGGCCGCTGCTCCTTCAGACTaGAGCCATCCTCGGTGCGGA | + |
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Preference number: 2 (lower is better) Translates to: IIVFSATSLIRTRKGLLAAAPSD*SHPRCG Trigger: TCCGCACCGAGGATGGCTTCAGTCTGAAGGAGCAGC...GGCCAACAGGCCCTTCCTGGTTCTTATAAGGGAAGTTGCACTGAACACTATTAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194455.2 |
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| 3UTR-3UTR GCA 90 bp | CGTTTTCACCTGCTGGTCTGCTCACAGCTTTGGCCTCCTCACTGTTTTATGTTCCATGGTCTTTCACTCTaGAGCCCAGCCTCAACTGGC | + |
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Preference number: 2 (lower is better) Translates to: RFHLLVCSQLWPPHCFMFHGLSL*SPASTG Trigger: GCCAGTTGAGGCTGGGCTGCAGAGTGAAAGACCATG...GAACATAAAACAGTGAGGAGGCCAAAGCTGTGAGCAGACCAGCAGGTGAAAACG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064725.11 |
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| 3UTR-3UTR CCA 90 bp | AACTACACGAAGCTTCTAGCTGCTGGAAGAAGTGTGCCTTCCTGGCTTTTAAGTAGGTTTGTGCCACCGTaGCTGGCTGCTCCCCCTTCA | + |
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Preference number: 2 (lower is better) Translates to: NYTKLLAAGRSVPSWLLSRFVPP*LAAPPS Trigger: TGAAGGGGGAGCAGCCAGCCACGGTGGCACAAACCT...ACTTAAAAGCCAGGAAGGCACACTTCTTCCAGCAGCTAGAAGCTTCGTGTAGTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000064725.11 |
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| 3UTR-3UTR CCA 90 bp | CCACTGGTCACTGTGAAAAATAGATCACACTGGACTCAGAGGCCAGAACCCAGGCAAGCCAATCGTTCTTaGAGGGGCAGCATGTCTCCT | + |
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Preference number: 2 (lower is better) Translates to: PLVTVKNRSHWTQRPEPRQANRS*RGSMSP Trigger: AGGAGACATGCTGCCCCTCCAAGAACGATTGGCTTG...CCTGGGTTCTGGCCTCTGAGTCCAGTGTGATCTATTTTTCACAGTGACCAGTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000064725.11 |
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| 3UTR CAA 90 bp | ATAGTGTTCAGTGCAACTTCCCTTATAAGAACCAGGAAGGGCCTGTaGGCCTTGAAGGTCACCCTATTGGGGTTCAGTGACCGGCCAGTA | + |
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Preference number: 2 (lower is better) Translates to: IVFSATSLIRTRKGL*ALKVTLLGFSDRPV Trigger: TACTGGCCGGTCACTGAACCCCAATAGGGTGACCTTCAAGGCCAACAGGCCCTTCCTGGTTCTTATAAGGGAAGTTGCACTGAACACTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194455.2 |
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| 3UTR-3UTR TCA 90 bp | GTGCTCCCAGGGTCCGTTTTCACCTGCTGGTCTGCTCACAGCTTTGGCCTCCTCCAAAAGCTTTCTCGTTaGACAGCTTTAAGAACAATG | + |
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Preference number: 2 (lower is better) Translates to: VLPGSVFTCWSAHSFGLLQKLSR*TALRTM Trigger: CATTGTTCTTAAAGCTGTTCAACGAGAAAGCTTTTG...GAGGAGGCCAAAGCTGTGAGCAGACCAGCAGGTGAAAACGGACCCTGGGAGCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064725.11 |
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| 3UTR-3UTR TCA 90 bp | TATGCAGTTTATGCAAATTATACCACACTGGACAAAACACAAAGGTGGGGAGTGGGTCTGATCCCAGTGTaGCCCCCTCGCTCCATCCCC | + |
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Preference number: 2 (lower is better) Translates to: YAVYANYTTLDKTQRWGVGLIPV*PPRSIP Trigger: GGGGATGGAGCGAGGGGGTCACACTGGGATCAGACC...CACTCCCCACCTTTGTGTTTTGTCCAGTGTGGTATAATTTGCATAAACTGCATA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000064725.11 |
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| 3UTR-3UTR GCA 90 bp | CGTTTTCACCTGCTGGTCTGCTCACAGCTTTGGCCTCCTCACTGTTTTATGTTCTCCCCAAGTGCTCCCTaGCAAAGGGCAAAAGAACCA | + |
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Preference number: 2 (lower is better) Translates to: RFHLLVCSQLWPPHCFMFSPSAP*QRAKEP Trigger: TGGTTCTTTTGCCCTTTGGCAGGGAGCACTTGGGGA...GAACATAAAACAGTGAGGAGGCCAAAGCTGTGAGCAGACCAGCAGGTGAAAACG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000064725.11 |
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| 3UTR-3UTR GCA 90 bp | CCCCCAAGCCTTCTTCAATCATCACATGTGAACCCTCCCTTCCCCTTTACTGAAAAAGCTGTCCCCAAGTaGTCCCTGCCAAAGGGCAAA | + |
|
Preference number: 2 (lower is better) Translates to: PPSLLQSSHVNPPFPFTEKAVPK*SLPKGK Trigger: TTTGCCCTTTGGCAGGGAGCACTTGGGGACAGCTTT...TTCAGTAAAGGGGAAGGGAGGGTTCACATGTGATGATTGAAGAAGGCTTGGGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000064725.11 |
||
| 3UTR-3UTR GCA 90 bp | ATACCTCTGAGAAGGCGGGGCTGGCTGTGTGCATCTTGTCTCCTAAGACTGTTTAGGCTAGGCAGCTGCTaGTCCAGGATCAGATATCTT | + |
|
Preference number: 2 (lower is better) Translates to: IPLRRRGWLCASCLLRLFRLGSC*SRIRYL Trigger: AAGATATCTGATCCTGGAGCAGCAGCTGCCTAGCCT...AAACAGTCTTAGGAGACAAGATGCACACAGCCAGCCCCGCCTTCTCAGAGGTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064725.11 |
||
| 3UTR-3UTR GCA 90 bp | TTTTCACCTGCTGGTCTGCTCACAGCTTTGGCCTCCTCACTGTTTTATGTTCTACTGTCCCTGGCACTGTaGCTTCCCACTGGTCACTGT | + |
|
Preference number: 2 (lower is better) Translates to: FSPAGLLTALASSLFYVLLSLAL*LPTGHC Trigger: ACAGTGACCAGTGGGAAGGCACAGTGCCAGGGACAG...TAGAACATAAAACAGTGAGGAGGCCAAAGCTGTGAGCAGACCAGCAGGTGAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064725.11 |
||
| 3UTR-3UTR CCA 90 bp | TCTGCACTGAGGGTTCTCAGTCTCCCTAGTGAGGGAAAGTGCATTGGCAGAGCGGATTCTGTCTTTCCCTaGACAAGCCAATCGTTCTTG | + |
|
Preference number: 2 (lower is better) Translates to: SALRVLSLPSEGKCIGRADSVFP*TSQSFL Trigger: CAAGAACGATTGGCTTGTCCAGGGAAAGACAGAATC...CGCTCTGCCAATGCACTTTCCCTCACTAGGGAGACTGAGAACCCTCAGTGCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064725.11 |
||
| 3UTR CAA 90 bp | CTGTGCTCCCAGGGTCCGTTTTCACCTGCTGGTCTGCTCACAGCTTaGGCCTCCTCACTGTTTTATGTTCTAATGGATCAATTACTCAGG | + |
|
Preference number: 2 (lower is better) Translates to: LCSQGPFSPAGLLTA*ASSLFYVLMDQLLR Trigger: CCTGAGTAATTGATCCATTAGAACATAAAACAGTGAGGAGGCCAAAGCTGTGAGCAGACCAGCAGGTGAAAACGGACCCTGGGAGCACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064725.11 |
||
| 3UTR CAA 90 bp | GATGACAGTTTACTGCCTGCTGTGGCAATGAGGAGGGAACCACCTTaGAAAGAACTACACGAAGCTTCTAGCTGCTGGAAGAAGTGTGCC | + |
|
Preference number: 2 (lower is better) Translates to: DDSLLPAVAMRREPP*KELHEASSCWKKCA Trigger: GGCACACTTCTTCCAGCAGCTAGAAGCTTCGTGTAGTTCTTTCAAAGGTGGTTCCCTCCTCATTGCCACAGCAGGCAGTAAACTGTCATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064725.11 |
||
| 3UTR-3UTR GCA 90 bp | AACTACACGAAGCTTCTAGCTGCTGGAAGAAGTGTGCCTTCCTGGCTTTTAAGTGCGGGGCTGGCTGTGTaGATCTTGTCTCCTAAGACT | + |
|
Preference number: 2 (lower is better) Translates to: NYTKLLAAGRSVPSWLLSAGLAV*ILSPKT Trigger: AGTCTTAGGAGACAAGATGCACACAGCCAGCCCCGC...ACTTAAAAGCCAGGAAGGCACACTTCTTCCAGCAGCTAGAAGCTTCGTGTAGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064725.11 |
||
| 3UTR-3UTR GCA 90 bp | CGTTTTCACCTGCTGGTCTGCTCACAGCTTTGGCCTCCTCACTGTTTTATGTTCCAGTGGGAATCAAACTaGAGCCTCCTCCAGTTTCTG | + |
|
Preference number: 2 (lower is better) Translates to: RFHLLVCSQLWPPHCFMFQWESN*SLLQFL Trigger: CAGAAACTGGAGGAGGCTGCAGTTTGATTCCCACTG...GAACATAAAACAGTGAGGAGGCCAAAGCTGTGAGCAGACCAGCAGGTGAAAACG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064725.11 |
||
| 3UTR CAA 90 bp | GATCACTCAGGAGGGAAGCTGAGGGAAAACTGTTGCCAGACCTTGTaGGGTTTAACCACATTTCTTTGTCCTTTACCCCATAGTGCTGGG | + |
|
Preference number: 2 (lower is better) Translates to: DHSGGKLRENCCQTL*GLTTFLCPLPHSAG Trigger: CCCAGCACTATGGGGTAAAGGACAAAGAAATGTGGTTAAACCCAACAAGGTCTGGCAACAGTTTTCCCTCAGCTTCCCTCCTGAGTGATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064725.11 |
||
| 3UTR CAA 90 bp | GTGGCTGAAGCCAGATCACTCAGGAGGGAAGCTGAGGGAAAACTGTaGCCAGACCTTGTTGGGTTTAACCACATTTCTTTGTCCTTTACC | + |
|
Preference number: 2 (lower is better) Translates to: VAEARSLRREAEGKL*PDLVGFNHISLSFT Trigger: GGTAAAGGACAAAGAAATGTGGTTAAACCCAACAAGGTCTGGCAACAGTTTTCCCTCAGCTTCCCTCCTGAGTGATCTGGCTTCAGCCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064725.11 |
||
| 3UTR CAA 90 bp | CTGGACTCAGAGGCCAGAACCCAGGACAAGATCCCTCTTCTTCTCTaGAGCCCATTTCTTCTTCACACAGCTTCTAATGTAGCAGGAACT | + |
|
Preference number: 2 (lower is better) Translates to: LDSEARTQDKIPLLL*SPFLLHTASNVAGT Trigger: AGTTCCTGCTACATTAGAAGCTGTGTGAAGAAGAAATGGGCTCAAGAGAAGAAGAGGGATCTTGTCCTGGGTTCTGGCCTCTGAGTCCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064725.11 |
||
| 3UTR-3UTR TCA 90 bp | AACTACACGAAGCTTCTAGCTGCTGGAAGAAGTGTGCCTTCCTGGCTTTTAAGTGAATCTGCAGCATGCTaGGTAAGCACTCTGCCACTG | + |
|
Preference number: 2 (lower is better) Translates to: NYTKLLAAGRSVPSWLLSESAAC*VSTLPL Trigger: CAGTGGCAGAGTGCTTACTCAGCATGCTGCAGATTC...ACTTAAAAGCCAGGAAGGCACACTTCTTCCAGCAGCTAGAAGCTTCGTGTAGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064725.11 |
||
| 3UTR CAA 90 bp | CCAGATCACTCAGGAGGGAAGCTGAGGGAAAACTGTTGCCAGACCTaGTTGGGTTTAACCACATTTCTTTGTCCTTTACCCCATAGTGCT | + |
|
Preference number: 2 (lower is better) Translates to: PDHSGGKLRENCCQT*LGLTTFLCPLPHSA Trigger: AGCACTATGGGGTAAAGGACAAAGAAATGTGGTTAAACCCAACAAGGTCTGGCAACAGTTTTCCCTCAGCTTCCCTCCTGAGTGATCTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064725.11 |
||
| 3UTR-3UTR TCA 90 bp | GCCTTCCCACTGGTCACTGTGAAAAATAGATCACACTGGACTCAGAGGCCAGAATCCCTCTTCTTCTCTTaGGCCCATTTCTTCTTCACA | + |
|
Preference number: 2 (lower is better) Translates to: AFPLVTVKNRSHWTQRPESLFFS*AHFFFT Trigger: TGTGAAGAAGAAATGGGCTCAAGAGAAGAAGAGGGA...TTCTGGCCTCTGAGTCCAGTGTGATCTATTTTTCACAGTGACCAGTGGGAAGGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064725.11 |
||
| 3UTR-3UTR TCA 90 bp | CACTTGAGATGTGTGTCTTACATCTGCAACAGTTATGCCGTTAATAGTAAAGATTTGGTTCCCCCTGTGTaGCAGGGGACCCTGACTCTC | + |
|
Preference number: 2 (lower is better) Translates to: HLRCVSYICNSYAVNSKDLVPPV*QGTLTL Trigger: GAGAGTCAGGGTCCCCTGTCACACAGGGGGAACCAA...ATCTTTACTATTAACGGCATAACTGTTGCAGATGTAAGACACACATCTCAAGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000064725.11 |
||
| 3UTR-3UTR GCA 90 bp | AAGAACTACACGAAGCTTCTAGCTGCTGGAAGAAGTGTGCCTTCCTGGCTTTTAAGAGAGGAACAGCAATaGAGCAGACCTTTGATTCCC | + |
|
Preference number: 2 (lower is better) Translates to: KNYTKLLAAGRSVPSWLLREEQQ*SRPLIP Trigger: GGGAATCAAAGGTCTGCTGCATTGCTGTTCCTCTCT...TAAAAGCCAGGAAGGCACACTTCTTCCAGCAGCTAGAAGCTTCGTGTAGTTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064725.11 |
||
| 3UTR-3UTR CCA 90 bp | CGTTTTCACCTGCTGGTCTGCTCACAGCTTTGGCCTCCTCACTGTTTTATGTTCTTTTCTTTTCTACTTTaGGGAGGAGAAAGACCATCT | + |
|
Preference number: 2 (lower is better) Translates to: RFHLLVCSQLWPPHCFMFFSFLL*GGERPS Trigger: AGATGGTCTTTCTCCTCCCCAAAGTAGAAAAGAAAA...GAACATAAAACAGTGAGGAGGCCAAAGCTGTGAGCAGACCAGCAGGTGAAAACG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000064725.11 |
||
| 3UTR-3UTR TCA 90 bp | AACTACACGAAGCTTCTAGCTGCTGGAAGAAGTGTGCCTTCCTGGCTTTTAAGTAATGTGAACACAAAATaGCGCGTTTTTAAAGCTGTC | + |
|
Preference number: 2 (lower is better) Translates to: NYTKLLAAGRSVPSWLLSNVNTK*RVFKAV Trigger: GACAGCTTTAAAAACGCGTCATTTTGTGTTCACATT...ACTTAAAAGCCAGGAAGGCACACTTCTTCCAGCAGCTAGAAGCTTCGTGTAGTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000064725.11 |
||
| 3UTR-3UTR TCA 90 bp | AGATGTGTGTCTTACATCTGCAACAGTTATGCCGTTAATAGTAAAGATGCCTCATTCAATCATCACATGTaGACCCTCCCTTCCCCTTTA | + |
|
Preference number: 2 (lower is better) Translates to: RCVSYICNSYAVNSKDASFNHHM*TLPSPL Trigger: TAAAGGGGAAGGGAGGGTTCACATGTGATGATTGAA...TGAGGCATCTTTACTATTAACGGCATAACTGTTGCAGATGTAAGACACACATCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064725.11 |
||
| 3UTR CAA 90 bp | GTTCATCCCAAGAAACCTCCGCAAAACAGAGGGAAACAATTAGATTaGGGTTATAGTTGTCACATTACGAAATCACAAAAAGATTTCACT | + |
|
Preference number: 2 (lower is better) Translates to: VHPKKPPQNRGKQLD*GYSCHITKSQKDFT Trigger: AGTGAAATCTTTTTGTGATTTCGTAATGTGACAACTATAACCCAAATCTAATTGTTTCCCTCTGTTTTGCGGAGGTTTCTTGGGATGAAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000064725.11 |
||
| 3UTR-3UTR CAA 90 bp | CTCCTTCAGACTGAAGCCATCCTCGGTGCGGAAGCGGGGCATGTGGACCACAAGAGGCTCTTCTCAGGCTaGGGCAGGATGAGCACCATG | + |
|
Preference number: 3 (lower is better) Translates to: LLQTEAILGAEAGHVDHKRLFSG*GRMSTM Trigger: CATGGTGCTCATCCTGCCCAAGCCTGAGAAGAGCCT...CTTGTGGTCCACATGCCCCGCTTCCGCACCGAGGATGGCTTCAGTCTGAAGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194455.2 |
||
| 3UTR TCA 72 bp | CTCAGAAAATACCGCAGGGTAGCGCTCCCATACCTCTaGGAAGGCGGGGCTGGCTGTGTGCATCTTGTCTCC | + |
|
Preference number: 3 (lower is better) Translates to: LRKYRRVALPYL*EGGAGCVHLVS Trigger: GGAGACAAGATGCACACAGCCAGCCCCGCCTTCTCAGAGGTATGGGAGCGCTACCCTGCGGTATTTTCTGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064725.11 |
||
| 3UTR GCA 72 bp | GAAGTGCGCTCTGTGCTCCCAGGGTCCGTTTTCACCTaGTGGTCTGCTCACAGCTTTGGCCTCCTCACTGTT | + |
|
Preference number: 3 (lower is better) Translates to: EVRSVLPGSVFT*WSAHSFGLLTV Trigger: AACAGTGAGGAGGCCAAAGCTGTGAGCAGACCAGCAGGTGAAAACGGACCCTGGGAGCACAGAGCGCACTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064725.11 |
||
| 3UTR CCA 72 bp | GTGATGTCATCCCCCTTGAAGGGCAGCTCTAGCACCTaGGTGCCCTCTGCCACGCGCCGGTATTTGAATTTG | + |
|
Preference number: 3 (lower is better) Translates to: VMSSPLKGSSST*VPSATRRYLNL Trigger: CAAATTCAAATACCGGCGCGTGGCAGAGGGCACCCAGGTGCTAGAGCTGCCCTTCAAGGGGGATGACATCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000194455.2 |
||
| 3UTR-3UTR CAA 90 bp | TTCAGACTGAAGCCATCCTCGGTGCGGAAGCGGGGCATGTGGACCACAAGCATAGCCACGCGCCGGTATTaGAATTTGCCTTCCTGGTAC | + |
|
Preference number: 3 (lower is better) Translates to: FRLKPSSVRKRGMWTTSIATRRY*NLPSWY Trigger: GTACCAGGAAGGCAAATTCAAATACCGGCGCGTGGC...TATGCTTGTGGTCCACATGCCCCGCTTCCGCACCGAGGATGGCTTCAGTCTGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194455.2 |
||
| 3UTR-3UTR CAA 90 bp | AGGAAGGGCCTGTTGGCCTTGAAGGTCACCCTATTGGGGTTCAGTGACCGGCCAAATGAGGCCCATGTCTaGCAGCTGCTCCTTCAGACT | + |
|
Preference number: 3 (lower is better) Translates to: RKGLLALKVTLLGFSDRPNEAHV*QLLLQT Trigger: AGTCTGAAGGAGCAGCTGCAAGACATGGGCCTCATT...TGGCCGGTCACTGAACCCCAATAGGGTGACCTTCAAGGCCAACAGGCCCTTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194455.2 |
||
| 3UTR TCA 72 bp | TACTGGGCTTGGTTCCCCCTGTGTGACAGGGGACCCTaGCTCTCCTCCTGTAGATTCTGTCTTTCCCTGGAC | + |
|
Preference number: 3 (lower is better) Translates to: YWAWFPLCDRGP*LSSCRFCLSLD Trigger: GTCCAGGGAAAGACAGAATCTACAGGAGGAGAGTCAGGGTCCCCTGTCACACAGGGGGAACCAAGCCCAGTA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000064725.11 |
||
| 3UTR TCA 72 bp | GGCTACTCTGGCACTGCCTGTGAAAGGCAGAGGAGGTaGGGGCAAGAGAGGAACAGCAATGCAGCAGACCTT | + |
|
Preference number: 3 (lower is better) Translates to: GYSGTACERQRR*GQERNSNAADL Trigger: AAGGTCTGCTGCATTGCTGTTCCTCTCTTGCCCTCACCTCCTCTGCCTTTCACAGGCAGTGCCAGAGTAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064725.11 |
||
| 3UTR GCA 72 bp | GGGCTGAAGAGATCAATGAGGCCCATGTCTTGCAGCTaGTCCTTCAGACTGAAGCCATCCTCGGTGCGGAAG | + |
|
Preference number: 3 (lower is better) Translates to: GLKRSMRPMSCS*SFRLKPSSVRK Trigger: CTTCCGCACCGAGGATGGCTTCAGTCTGAAGGAGCAGCTGCAAGACATGGGCCTCATTGATCTCTTCAGCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194455.2 |
||
| 3UTR CCA 72 bp | GTGCGCTCTGTGCTCCCAGGGTCCGTTTTCACCTGCTaGTCTGCTCACAGCTTTGGCCTCCTCACTGTTTTA | + |
|
Preference number: 3 (lower is better) Translates to: VRSVLPGSVFTC*SAHSFGLLTVL Trigger: TAAAACAGTGAGGAGGCCAAAGCTGTGAGCAGACCAGCAGGTGAAAACGGACCCTGGGAGCACAGAGCGCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064725.11 |
||
| 3UTR-3UTR CAA 90 bp | TCTGCACTGAGGGTTCTCAGTCTCCCTAGTGAGGGAAAGTGCATTGGCAGAGCGCTGCTCCCCCTTCACTaGCCCAAAAGTGGTGTAGCA | + |
|
Preference number: 3 (lower is better) Translates to: SALRVLSLPSEGKCIGRALLPLH*PKSGVA Trigger: TGCTACACCACTTTTGGGCAAGTGAAGGGGGAGCAG...CGCTCTGCCAATGCACTTTCCCTCACTAGGGAGACTGAGAACCCTCAGTGCAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000064725.11 |
||
| 3UTR TCA 72 bp | CCAAATCTTTCTGCAACAGCTAAGCAAGTGCTGGTCTaGTCCCAGTGTGACCCCCTCGCTCCATCCCCTGGT | + |
|
Preference number: 3 (lower is better) Translates to: PNLSATAKQVLV*SQCDPLAPSPG Trigger: ACCAGGGGATGGAGCGAGGGGGTCACACTGGGATCAGACCAGCACTTGCTTAGCTGTTGCAGAAAGATTTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000064725.11 |
||
| 3UTR TCA 72 bp | CCTGTTGGCCTTGAAGGTCACCCTATTGGGGTTCAGTaGCCGGCCAGTAATCACGACAGAAGTACTCGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: PVGLEGHPIGVQ*PASNHDRSTRC Trigger: GCAGCGAGTACTTCTGTCGTGATTACTGGCCGGTCACTGAACCCCAATAGGGTGACCTTCAAGGCCAACAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194455.2 |
||
| 3UTR GCA 72 bp | CTTTGTGGAATGCGTCGGAGACATAGAGGTCGTCCCTaGCTCCAGCAACGATCCCTGGGAGTTGGGACTTTT | + |
|
Preference number: 3 (lower is better) Translates to: LCGMRRRHRGRP*LQQRSLGVGTF Trigger: AAAAGTCCCAACTCCCAGGGATCGTTGCTGGAGGCAGGGACGACCTCTATGTCTCCGACGCATTCCACAAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194455.2 |
||
| 3UTR CCA 72 bp | CCGTGGCTGGCTGCTCCCCCTTCACTTGCCCAAAAGTaGTGTAGCATCTGTACTCCAGTCTCTCGTCTTCAA | + |
|
Preference number: 3 (lower is better) Translates to: PWLAAPPSLAQK*CSICTPVSRLQ Trigger: TTGAAGACGAGAGACTGGAGTACAGATGCTACACCACTTTTGGGCAAGTGAAGGGGGAGCAGCCAGCCACGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000064725.11 |
||
| 3UTR CCA 72 bp | CAGGGTAGCGCTCCCATACCTCTGAGAAGGCGGGGCTaGCTGTGTGCATCTTGTCTCCTAAGACTGTTTTCT | + |
|
Preference number: 3 (lower is better) Translates to: QGSAPIPLRRRG*LCASCLLRLFS Trigger: AGAAAACAGTCTTAGGAGACAAGATGCACACAGCCAGCCCCGCCTTCTCAGAGGTATGGGAGCGCTACCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064725.11 |
||
| 3UTR GCA 72 bp | CTCTGTGCTCCCAGGGTCCGTTTTCACCTGCTGGTCTaGTCACAGCTTTGGCCTCCTCACTGTTTTATGTTC | + |
|
Preference number: 3 (lower is better) Translates to: LCAPRVRFHLLV*SQLWPPHCFMF Trigger: GAACATAAAACAGTGAGGAGGCCAAAGCTGTGAGCAGACCAGCAGGTGAAAACGGACCCTGGGAGCACAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064725.11 |
||
| 3UTR CCA 72 bp | CAGATCCAAATCTTTCTGCAACAGCTAAGCAAGTGCTaGTCTGATCCCAGTGTGACCCCCTCGCTCCATCCC | + |
|
Preference number: 3 (lower is better) Translates to: QIQIFLQQLSKC*SDPSVTPSLHP Trigger: GGGATGGAGCGAGGGGGTCACACTGGGATCAGACCAGCACTTGCTTAGCTGTTGCAGAAAGATTTGGATCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064725.11 |
||
| 3UTR CCA 72 bp | GACATAGAGGTCGTCCCTGCCTCCAGCAACGATCCCTaGGAGTTGGGACTTTTCAGGGCTGAAGAGATCAAT | + |
|
Preference number: 3 (lower is better) Translates to: DIEVVPASSNDP*ELGLFRAEEIN Trigger: ATTGATCTCTTCAGCCCTGAAAAGTCCCAACTCCCAGGGATCGTTGCTGGAGGCAGGGACGACCTCTATGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194455.2 |
||
| 3UTR GCA 72 bp | GCCTTCCTCATTTACCTCAAGAAATGCTTTGTGGAATaGGTCGGAGACATAGAGGTCGTCCCTGCCTCCAGC | + |
|
Preference number: 3 (lower is better) Translates to: AFLIYLKKCFVE*VGDIEVVPASS Trigger: GCTGGAGGCAGGGACGACCTCTATGTCTCCGACGCATTCCACAAAGCATTTCTTGAGGTAAATGAGGAAGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194455.2 |
||
| 3UTR CCA 72 bp | GCCTTCCCACTGGTCACTGTGAAAAATAGATCACACTaGACTCAGAGGCCAGAACCCAGGACAAGATCCCTC | + |
|
Preference number: 3 (lower is better) Translates to: AFPLVTVKNRSH*TQRPEPRTRSL Trigger: GAGGGATCTTGTCCTGGGTTCTGGCCTCTGAGTCCAGTGTGATCTATTTTTCACAGTGACCAGTGGGAAGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064725.11 |
||
| 3UTR-3UTR CAA 90 bp | TCTGCACTGAGGGTTCTCAGTCTCCCTAGTGAGGGAAAGTGCATTGGCAGAGCGATCCCTCTTCTTCTCTaGAGCCCATTTCTTCTTCAC | + |
|
Preference number: 3 (lower is better) Translates to: SALRVLSLPSEGKCIGRAIPLLL*SPFLLH Trigger: GTGAAGAAGAAATGGGCTCAAGAGAAGAAGAGGGAT...CGCTCTGCCAATGCACTTTCCCTCACTAGGGAGACTGAGAACCCTCAGTGCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064725.11 |
||
| 3UTR TCA 72 bp | ATATCCAACTCTTTTCTCTGGTGCTTATTTAACGGGTaGCAGCTGTCTCCCGGCTACCTGTCCCTGGCACTG | + |
|
Preference number: 3 (lower is better) Translates to: ISNSFLWCLFNG*QLSPGYLSLAL Trigger: CAGTGCCAGGGACAGGTAGCCGGGAGACAGCTGTCACCCGTTAAATAAGCACCAGAGAAAAGAGTTGGATAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064725.11 |
||
| 3UTR GCA 72 bp | TTCCAGATCCAAATCTTTCTGCAACAGCTAAGCAAGTaGTGGTCTGATCCCAGTGTGACCCCCTCGCTCCAT | + |
|
Preference number: 3 (lower is better) Translates to: FQIQIFLQQLSK*WSDPSVTPSLH Trigger: ATGGAGCGAGGGGGTCACACTGGGATCAGACCAGCACTTGCTTAGCTGTTGCAGAAAGATTTGGATCTGGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064725.11 |
||
| 3UTR CCA 72 bp | TTCTACTTTGGGGAGGAGAAAGACCATCTTGAGACATaGTCTTTCACTCTGCAGCCCAGCCTCAACTGGCCT | + |
|
Preference number: 3 (lower is better) Translates to: FYFGEEKDHLET*SFTLQPSLNWP Trigger: AGGCCAGTTGAGGCTGGGCTGCAGAGTGAAAGACCATGTCTCAAGATGGTCTTTCTCCTCCCCAAAGTAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064725.11 |
||
| 3UTR-3UTR CAA 90 bp | CGTTTTCACCTGCTGGTCTGCTCACAGCTTTGGCCTCCTCACTGTTTTATGTTCGCTGAGGGAAAACTGTaGCCAGACCTTGTTGGGTTT | + |
|
Preference number: 3 (lower is better) Translates to: RFHLLVCSQLWPPHCFMFAEGKL*PDLVGF Trigger: AAACCCAACAAGGTCTGGCAACAGTTTTCCCTCAGC...GAACATAAAACAGTGAGGAGGCCAAAGCTGTGAGCAGACCAGCAGGTGAAAACG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000064725.11 |
||
| 3UTR-3UTR CAA 90 bp | TTAGTTCACACAAGGATTAGCCACTCTCCCCATGAATATAATAGTGTTCAGTGCACCAGGAAGGGCCTGTaGGCCTTGAAGGTCACCCTA | + |
|
Preference number: 3 (lower is better) Translates to: LVHTRISHSPHEYNSVQCTRKGL*ALKVTL Trigger: TAGGGTGACCTTCAAGGCCAACAGGCCCTTCCTGGT...GCACTGAACACTATTATATTCATGGGGAGAGTGGCTAATCCTTGTGTGAACTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194455.2 |
||
| 3UTR-3UTR CAA 90 bp | TTTTCACCTGCTGGTCTGCTCACAGCTTTGGCCTCCTCACTGTTTTATGTTCTATCACTTTCTAAAACATaGGTCCTGGGTGGGAATGGG | + |
|
Preference number: 3 (lower is better) Translates to: FSPAGLLTALASSLFYVLSLSKT*VLGGNG Trigger: CCCATTCCCACCCAGGACCAATGTTTTAGAAAGTGA...TAGAACATAAAACAGTGAGGAGGCCAAAGCTGTGAGCAGACCAGCAGGTGAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000064725.11 |
||
| 3UTR GCA 72 bp | ATTGAGCCCAGGGCCTTACATAGGCTAGGCAGCTGCTaGTCCAGGATCAGATATCTTAATGTGAACACAAAA | + |
|
Preference number: 3 (lower is better) Translates to: IEPRALHRLGSC*SRIRYLNVNTK Trigger: TTTTGTGTTCACATTAAGATATCTGATCCTGGAGCAGCAGCTGCCTAGCCTATGTAAGGCCCTGGGCTCAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064725.11 |
||
| 3UTR GCA 72 bp | CCAGATCACTCAGGAGGGAAGCTGAGGGAAAACTGTTaGCAGACCTTGTTGGGTTTAACCACATTTCTTTGT | + |
|
Preference number: 3 (lower is better) Translates to: PDHSGGKLRENC*QTLLGLTTFLC Trigger: ACAAAGAAATGTGGTTAAACCCAACAAGGTCTGGCAACAGTTTTCCCTCAGCTTCCCTCCTGAGTGATCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064725.11 |
||
| 3UTR-3UTR CAA 90 bp | AACTACACGAAGCTTCTAGCTGCTGGAAGAAGTGTGCCTTCCTGGCTTTTAAGTAGGAGAAAGACCATCTaGAGACATGGTCTTTCACTC | + |
|
Preference number: 3 (lower is better) Translates to: NYTKLLAAGRSVPSWLLSRRKTI*RHGLSL Trigger: GAGTGAAAGACCATGTCTCAAGATGGTCTTTCTCCT...ACTTAAAAGCCAGGAAGGCACACTTCTTCCAGCAGCTAGAAGCTTCGTGTAGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064725.11 |
||
| 3UTR GCA 72 bp | GTTAAAAGGCCCGACCCAGTCATTCCCAAAGGAAATTaGCCAGCTTCCATTCTCTCTCTGAGTAGAAAATCT | + |
|
Preference number: 3 (lower is better) Translates to: VKRPDPVIPKGN*PASILSLSRKS Trigger: AGATTTTCTACTCAGAGAGAGAATGGAAGCTGGGCAATTTCCTTTGGGAATGACTGGGTCGGGCCTTTTAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064725.11 |
||
| 3UTR-3UTR CAA 90 bp | AAGAACTACACGAAGCTTCTAGCTGCTGGAAGAAGTGTGCCTTCCTGGCTTTTAAACTGTTGCCAGACCTaGTTGGGTTTAACCACATTT | + |
|
Preference number: 3 (lower is better) Translates to: KNYTKLLAAGRSVPSWLLNCCQT*LGLTTF Trigger: AAATGTGGTTAAACCCAACAAGGTCTGGCAACAGTT...TAAAAGCCAGGAAGGCACACTTCTTCCAGCAGCTAGAAGCTTCGTGTAGTTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064725.11 |
||
| 3UTR TCA 72 bp | CAGCAGACCTTTGATTCCCTTCAGATGGACCTATTCTaGAGGAAGGAACGATATCCAACTCTTTTCTCTGGT | + |
|
Preference number: 3 (lower is better) Translates to: QQTFDSLQMDLF*RKERYPTLFSG Trigger: ACCAGAGAAAAGAGTTGGATATCGTTCCTTCCTTCAGAATAGGTCCATCTGAAGGGAATCAAAGGTCTGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064725.11 |
||
| 3UTR GCA 72 bp | ATTAGCCACTCTCCCCATGAATATAATAGTGTTCAGTaGAACTTCCCTTATAAGAACCAGGAAGGGCCTGTT | + |
|
Preference number: 3 (lower is better) Translates to: ISHSPHEYNSVQ*NFPYKNQEGPV Trigger: AACAGGCCCTTCCTGGTTCTTATAAGGGAAGTTGCACTGAACACTATTATATTCATGGGGAGAGTGGCTAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194455.2 |
||
| 3UTR CCA 72 bp | TATGCAAATTATACCACACTGGACAAAACACAAAGGTaGGGAGTGGTGGGAAAAGGTAAACGTCAGCATTTG | + |
|
Preference number: 3 (lower is better) Translates to: YANYTTLDKTQR*GVVGKGKRQHL Trigger: CAAATGCTGACGTTTACCTTTTCCCACCACTCCCCACCTTTGTGTTTTGTCCAGTGTGGTATAATTTGCATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064725.11 |
||
| 3UTR-3UTR CAA 90 bp | AAGAACTACACGAAGCTTCTAGCTGCTGGAAGAAGTGTGCCTTCCTGGCTTTTAGCAAAAGCTTTCTCGTaGAACAGCTTTAAGAACAAT | + |
|
Preference number: 3 (lower is better) Translates to: KNYTKLLAAGRSVPSWLLAKAFS*NSFKNN Trigger: ATTGTTCTTAAAGCTGTTCAACGAGAAAGCTTTTGC...TAAAAGCCAGGAAGGCACACTTCTTCCAGCAGCTAGAAGCTTCGTGTAGTTCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064725.11 |
||
| 3UTR TCA 72 bp | AAATCACAAAAAGATTTCACTTCAGCTGCTATTGAGTaGCAGTGGGAATCAAACTGCAGCCTCCTCCAGTTT | + |
|
Preference number: 3 (lower is better) Translates to: KSQKDFTSAAIE*QWESNCSLLQF Trigger: AAACTGGAGGAGGCTGCAGTTTGATTCCCACTGTCACTCAATAGCAGCTGAAGTGAAATCTTTTTGTGATTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064725.11 |
||
| 3UTR TCA 72 bp | AGGGATGTTCGTGCTGGAGAACATGGTGGAGTACTGTaGAACTTTATGCAGTTTATGCAAATTATACCACAC | + |
|
Preference number: 3 (lower is better) Translates to: RDVRAGEHGGVL*NFMQFMQIIPH Trigger: GTGTGGTATAATTTGCATAAACTGCATAAAGTTTCACAGTACTCCACCATGTTCTCCAGCACGAACATCCCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064725.11 |
||
| 3UTR TCA 72 bp | CAGTCTCTCGTCTTCAAGTGGAAAAGTCCATTCTCGTaGGGTGGCAGTCGTATTTATTTTTACTTCTATTCA | + |
|
Preference number: 3 (lower is better) Translates to: QSLVFKWKSPFS*GGSRIYFYFYS Trigger: TGAATAGAAGTAAAAATAAATACGACTGCCACCTCACGAGAATGGACTTTTCCACTTGAAGACGAGAGACTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000064725.11 |
||
| 3UTR TCA 72 bp | CCTCTACCCTTTCAAGATGCCTGCTATCCTCTAAGATaGAATAGTAATATATTTACCTCTTGTTTTTATGGT | + |
|
Preference number: 3 (lower is better) Translates to: PLPFQDACYPLR*NSNIFTSCFYG Trigger: ACCATAAAAACAAGAGGTAAATATATTACTATTTCATCTTAGAGGATAGCAGGCATCTTGAAAGGGTAGAGG 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064725.11 |
||
| CDS-3UTR CCA 90 bp | GTGCTCCCAGGGTCCGTTTTCACCTGCTGGTCTGCTCACAGCTTTGGCCTCCTCCTCCTGCAGCAGCTCTaGGGTGAGCTCCTGCTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: VLPGSVFTCWSAHSFGLLLLQQL*GELLLH Trigger: GTGGAGCAGGAGCTCACCCCAGAGCTGCTGCAGGAG...GAGGAGGCCAAAGCTGTGAGCAGACCAGCAGGTGAAAACGGACCCTGGGAGCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064725.11 |
||
| CDS-3UTR CCA 90 bp | TCTGCACTGAGGGTTCTCAGTCTCCCTAGTGAGGGAAAGTGCATTGGCAGAGCGGGCAGCTCTAGCACCTaGGTGCCCTCTGCCACGCGC | + |
|
Preference number: 4 (lower is better) Translates to: SALRVLSLPSEGKCIGRAGSSST*VPSATR Trigger: GCGCGTGGCAGAGGGCACCCAGGTGCTAGAGCTGCC...CGCTCTGCCAATGCACTTTCCCTCACTAGGGAGACTGAGAACCCTCAGTGCAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064725.11 |
||
| 3UTR CAA 72 bp | TTGGGCAGGATGAGCACCATGGTGATGTCATCCCCCTaGAAGGGCAGCTCTAGCACCTGGGTGCCCTCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: LGRMSTMVMSSP*KGSSSTWVPSA Trigger: GGCAGAGGGCACCCAGGTGCTAGAGCTGCCCTTCAAGGGGGATGACATCACCATGGTGCTCATCCTGCCCAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000194455.2 |
||
| CDS-3UTR CCA 90 bp | GTGCTCCCAGGGTCCGTTTTCACCTGCTGGTCTGCTCACAGCTTTGGCCTCCTCATCGCGAATTGGCCTTaGACAGTTCCCAGACCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: VLPGSVFTCWSAHSFGLLIANWP*TVPRPA Trigger: GGCGGGTCTGGGAACTGTCCAAGGCCAATTCGCGAT...GAGGAGGCCAAAGCTGTGAGCAGACCAGCAGGTGAAAACGGACCCTGGGAGCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064725.11 |
||
| CDS-3UTR GCA 90 bp | GTGCGGAAGCGGGGCATGTGGACCACAAGCATAGTCTCTGACAGCTCATCCAGCCAGGGGAGCGGTAAATaGACAAGGGATTCACGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: VRKRGMWTTSIVSDSSSSQGSGK*TRDSRG Trigger: TCCCCGTGAATCCCTTGTGCATTTACCGCTCCCCTG...GCTGGATGAGCTGTCAGAGACTATGCTTGTGGTCCACATGCCCCGCTTCCGCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000194455.2 |
||
| CDS-3UTR CCA 90 bp | GTGCTCCCAGGGTCCGTTTTCACCTGCTGGTCTGCTCACAGCTTTGGCCTCCTCAGTCAGAGGACTTGTTaGCTTTTCGATAGAGTCGGC | + |
|
Preference number: 4 (lower is better) Translates to: VLPGSVFTCWSAHSFGLLSQRTC*LFDRVG Trigger: GCCGACTCTATCGAAAAGCCAACAAGTCCTCTGACT...GAGGAGGCCAAAGCTGTGAGCAGACCAGCAGGTGAAAACGGACCCTGGGAGCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064725.11 |
||
| 3UTR CAA 72 bp | ACCAGGAAGGGCCTGTTGGCCTTGAAGGTCACCCTATaGGGGTTCAGTGACCGGCCAGTAATCACGACAGAA | + |
|
Preference number: 4 (lower is better) Translates to: TRKGLLALKVTL*GFSDRPVITTE Trigger: TTCTGTCGTGATTACTGGCCGGTCACTGAACCCCAATAGGGTGACCTTCAAGGCCAACAGGCCCTTCCTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194455.2 |
||
| CDS-3UTR TCA 90 bp | CGTTTTCACCTGCTGGTCTGCTCACAGCTTTGGCCTCCTCACTGTTTTATGTTCGCTGCTCCTTCAGACTaGAGCCATCCTCGGTGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: RFHLLVCSQLWPPHCFMFAAPSD*SHPRCG Trigger: TCCGCACCGAGGATGGCTTCAGTCTGAAGGAGCAGC...GAACATAAAACAGTGAGGAGGCCAAAGCTGTGAGCAGACCAGCAGGTGAAAACG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064725.11 |
||
| CDS-3UTR GCA 90 bp | AGCAGACCTTTGATTCCCTTCAGATGGACCTATTCTGAAGGAAGGAACGATATCGCTCTAGCACCTGGGTaGCCTCTGCCACGCGCCGGT | + |
|
Preference number: 4 (lower is better) Translates to: SRPLIPFRWTYSEGRNDIALAPG*PLPRAG Trigger: ACCGGCGCGTGGCAGAGGGCACCCAGGTGCTAGAGC...GATATCGTTCCTTCCTTCAGAATAGGTCCATCTGAAGGGAATCAAAGGTCTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064725.11 |
||
| CDS-3UTR CCA 90 bp | CTTCCACAGGCCCTTGAAGTAAATGGTGTTAACCAGAACCAGGGCAGTGAGCTCCCAGGGGCTGGAGCTTaGCTCCATAGACAACCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: LPQALEVNGVNQNQGSELPGAGA*LHRQPH Trigger: GTGAGGTTGTCTATGGAGCCAAGCTCCAGCCCCTGG...GAGCTCACTGCCCTGGTTCTGGTTAACACCATTTACTTCAAGGGCCTGTGGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195438.6 |
||
| 3UTR CAA 72 bp | ACTTCCCTTATAAGAACCAGGAAGGGCCTGTTGGCCTaGAAGGTCACCCTATTGGGGTTCAGTGACCGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: TSLIRTRKGLLA*KVTLLGFSDRP Trigger: TGGCCGGTCACTGAACCCCAATAGGGTGACCTTCAAGGCCAACAGGCCCTTCCTGGTTCTTATAAGGGAAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194455.2 |
||
| CDS-3UTR GCA 90 bp | ATACCTCTGAGAAGGCGGGGCTGGCTGTGTGCATCTTGTCTCCTAAGACTGTTTCAGGGGAGCGGTAAATaGACAAGGGATTCACGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: IPLRRRGWLCASCLLRLFQGSGK*TRDSRG Trigger: TCCCCGTGAATCCCTTGTGCATTTACCGCTCCCCTG...AAACAGTCTTAGGAGACAAGATGCACACAGCCAGCCCCGCCTTCTCAGAGGTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000064725.11 |
||
| CDS-3UTR CCA 90 bp | CCCCCAAGCCTTCTTCAATCATCACATGTGAACCCTCCCTTCCCCTTTACTGAACCAGGGGCTGGAGCTTaGCTCCATAGACAACCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: PPSLLQSSHVNPPFPFTEPGAGA*LHRQPH Trigger: GTGAGGTTGTCTATGGAGCCAAGCTCCAGCCCCTGG...TTCAGTAAAGGGGAAGGGAGGGTTCACATGTGATGATTGAAGAAGGCTTGGGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000064725.11 |
||
| 3UTR CAA 72 bp | CTTTTCAGGGCTGAAGAGATCAATGAGGCCCATGTCTaGCAGCTGCTCCTTCAGACTGAAGCCATCCTCGGT | + |
|
Preference number: 4 (lower is better) Translates to: LFRAEEINEAHV*QLLLQTEAILG Trigger: ACCGAGGATGGCTTCAGTCTGAAGGAGCAGCTGCAAGACATGGGCCTCATTGATCTCTTCAGCCCTGAAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194455.2 |
||
| CDS-3UTR TCA 90 bp | AACTACACGAAGCTTCTAGCTGCTGGAAGAAGTGTGCCTTCCTGGCTTTTAAGTGCTCCGGATTCTCCTTaGAGTCCAGGGGCTGGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: NYTKLLAAGRSVPSWLLSAPDSP*SPGAGA Trigger: AGCTCCAGCCCCTGGACTTCAAGGAGAATCCGGAGC...ACTTAAAAGCCAGGAAGGCACACTTCTTCCAGCAGCTAGAAGCTTCGTGTAGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064725.11 |
||
| CDS-3UTR GCA 90 bp | AAGAACTACACGAAGCTTCTAGCTGCTGGAAGAAGTGTGCCTTCCTGGCTTTTATCATCCAGCCACTCCTaGAGCAGCTCTGGGGTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: KNYTKLLAAGRSVPSWLLSSSHS*SSSGVS Trigger: GCTCACCCCAGAGCTGCTGCAGGAGTGGCTGGATGA...TAAAAGCCAGGAAGGCACACTTCTTCCAGCAGCTAGAAGCTTCGTGTAGTTCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064725.11 |
||
| CDS-3UTR TCA 90 bp | AACTACACGAAGCTTCTAGCTGCTGGAAGAAGTGTGCCTTCCTGGCTTTTAAGTAGGGCCTGTTGGCCTTaGAGGTCACCCTATTGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: NYTKLLAAGRSVPSWLLSRACWP*RSPYWG Trigger: ACCCCAATAGGGTGACCTTCAAGGCCAACAGGCCCT...ACTTAAAAGCCAGGAAGGCACACTTCTTCCAGCAGCTAGAAGCTTCGTGTAGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064725.11 |
||
| CDS-3UTR GCA 90 bp | CCACTGGTCACTGTGAAAAATAGATCACACTGGACTCAGAGGCCAGAACCCAGGAGAAGTACTCGCTGCTaGTTCACTGCCTTCCTCATT | + |
|
Preference number: 4 (lower is better) Translates to: PLVTVKNRSHWTQRPEPRRSTRC*FTAFLI Trigger: AATGAGGAAGGCAGTGAAGCAGCAGCGAGTACTTCT...CCTGGGTTCTGGCCTCTGAGTCCAGTGTGATCTATTTTTCACAGTGACCAGTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064725.11 |
||
| CDS-3UTR CCA 90 bp | CGTTTTCACCTGCTGGTCTGCTCACAGCTTTGGCCTCCTCACTGTTTTATGTTCTGGCAAATCGCGAATTaGCCTTGGACAGTTCCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: RFHLLVCSQLWPPHCFMFWQIAN*PWTVPR Trigger: TCTGGGAACTGTCCAAGGCCAATTCGCGATTTGCCA...GAACATAAAACAGTGAGGAGGCCAAAGCTGTGAGCAGACCAGCAGGTGAAAACG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064725.11 |
||
| CDS-3UTR CCA 90 bp | GATCACTCAGGAGGGAAGCTGAGGGAAAACTGTTGCCAGACCTTGTTGGGTTTATGTCGTTGTCATTCTTaGAGTCTGCCAGGTGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: DHSGGKLRENCCQTLLGLCRCHS*SLPGAG Trigger: ACCAGCACCTGGCAGACTCCAAGAATGACAACGACA...TAAACCCAACAAGGTCTGGCAACAGTTTTCCCTCAGCTTCCCTCCTGAGTGATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064725.11 |
||
| CDS-3UTR CCA 90 bp | CTTGAAGTAAATGGTGTTAACCAGAACCAGGGCAGTGAGCTCGTTAATGGCGCCCTCCAAAAAGGCGGTTaGCTGATACCAAGTCAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LEVNGVNQNQGSELVNGALQKGG*LIPSQR Trigger: CCTCTGACTTGGTATCAGCCAACCGCCTTTTTGGAG...GGCGCCATTAACGAGCTCACTGCCCTGGTTCTGGTTAACACCATTTACTTCAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000195438.6 |
||
| 3UTR CAA 72 bp | CATACCTCTGAGAAGGCGGGGCTGGCTGTGTGCATCTaGTCTCCTAAGACTGTTTTCTGTTGTGACCTTAAC | + |
|
Preference number: 4 (lower is better) Translates to: HTSEKAGLAVCI*SPKTVFCCDLN Trigger: GTTAAGGTCACAACAGAAAACAGTCTTAGGAGACAAGATGCACACAGCCAGCCCCGCCTTCTCAGAGGTATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064725.11 |
||
| 3UTR CAA 72 bp | GTGAGGGCAAGAGAGGAACAGCAATGCAGCAGACCTTaGATTCCCTTCAGATGGACCTATTCTGAAGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: VRAREEQQCSRP*IPFRWTYSEGR Trigger: CCTTCCTTCAGAATAGGTCCATCTGAAGGGAATCAAAGGTCTGCTGCATTGCTGTTCCTCTCTTGCCCTCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064725.11 |
||
| 3UTR CAA 72 bp | TTACTGCCTGCTGTGGCAATGAGGAGGGAACCACCTTaGAAAGAACTACACGAAGCTTCTAGCTGCTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LLPAVAMRREPP*KELHEASSCWK Trigger: CTTCCAGCAGCTAGAAGCTTCGTGTAGTTCTTTCAAAGGTGGTTCCCTCCTCATTGCCACAGCAGGCAGTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064725.11 |
||
| CDS-3UTR TCA 90 bp | CCCCCAAGCCTTCTTCAATCATCACATGTGAACCCTCCCTTCCCCTTTACTGAAGGAGATGCTCAAGGGTaGCAGGAAAATGTTGTCGTT | + |
|
Preference number: 4 (lower is better) Translates to: PPSLLQSSHVNPPFPFTEGDAQG*QENVVV Trigger: AACGACAACATTTTCCTGTCACCCTTGAGCATCTCC...TTCAGTAAAGGGGAAGGGAGGGTTCACATGTGATGATTGAAGAAGGCTTGGGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000064725.11 |
||
| CDS-3UTR TCA 90 bp | AACTACACGAAGCTTCTAGCTGCTGGAAGAAGTGTGCCTTCCTGGCTTTTAAGTCACAAGCATAGTCTCTaGCAGCTCATCCAGCCACTC | + |
|
Preference number: 4 (lower is better) Translates to: NYTKLLAAGRSVPSWLLSHKHSL*QLIQPL Trigger: GAGTGGCTGGATGAGCTGTCAGAGACTATGCTTGTG...ACTTAAAAGCCAGGAAGGCACACTTCTTCCAGCAGCTAGAAGCTTCGTGTAGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064725.11 |
||
| CDS-3UTR CCA 90 bp | CTTCCACAGGCCCTTGAAGTAAATGGTGTTAACCAGAACCAGGGCAGTGAGCTCGTCGGCAGTTCAGTTTaGCAAAGAAGAAGTGGATCT | + |
|
Preference number: 4 (lower is better) Translates to: LPQALEVNGVNQNQGSELVGSSV*QRRSGS Trigger: AGATCCACTTCTTCTTTGCCAAACTGAACTGCCGAC...GAGCTCACTGCCCTGGTTCTGGTTAACACCATTTACTTCAAGGGCCTGTGGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195438.6 |
||
| 3UTR CAA 72 bp | GCCAGATCACTCAGGAGGGAAGCTGAGGGAAAACTGTaGCCAGACCTTGTTGGGTTTAACCACATTTCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: ARSLRREAEGKL*PDLVGFNHISL Trigger: CAAAGAAATGTGGTTAAACCCAACAAGGTCTGGCAACAGTTTTCCCTCAGCTTCCCTCCTGAGTGATCTGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064725.11 |
||
| 3UTR CAA 72 bp | CAGGGTCCGTTTTCACCTGCTGGTCTGCTCACAGCTTaGGCCTCCTCACTGTTTTATGTTCTAATGGATCAA | + |
|
Preference number: 4 (lower is better) Translates to: QGPFSPAGLLTA*ASSLFYVLMDQ Trigger: TTGATCCATTAGAACATAAAACAGTGAGGAGGCCAAAGCTGTGAGCAGACCAGCAGGTGAAAACGGACCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064725.11 |
||
| CDS-3UTR TCA 90 bp | AGATGTGTGTCTTACATCTGCAACAGTTATGCCGTTAATAGTAAAGATGCCTCATGGAACCTTCTGCTCTaGGCCATCCTCCTCGGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: RCVSYICNSYAVNSKDASWNLLL*AILLGG Trigger: GCCACCGAGGAGGATGGCTCAGAGCAGAAGGTTCCA...TGAGGCATCTTTACTATTAACGGCATAACTGTTGCAGATGTAAGACACACATCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064725.11 |
||
| CDS-3UTR CCA 90 bp | CCCCCAAGCCTTCTTCAATCATCACATGTGAACCCTCCCTTCCCCTTTACTGAATTGGCAAAGAAGAAGTaGATCTGGTCGGATGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: PPSLLQSSHVNPPFPFTELAKKK*IWSDVF Trigger: GAAGACATCCGACCAGATCCACTTCTTCTTTGCCAA...TTCAGTAAAGGGGAAGGGAGGGTTCACATGTGATGATTGAAGAAGGCTTGGGGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000064725.11 |
||
| CDS-3UTR CCA 90 bp | GCCCTTGAAGTAAATGGTGTTAACCAGAACCAGGGCAGTGAGCTCGTTAATGGCTTGGCAAAGAAGAAGTaGATCTGGTCGGATGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: ALEVNGVNQNQGSELVNGLAKKK*IWSDVF Trigger: GAAGACATCCGACCAGATCCACTTCTTCTTTGCCAA...GCCATTAACGAGCTCACTGCCCTGGTTCTGGTTAACACCATTTACTTCAAGGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195438.6 |
||
| CDS-3UTR CCA 90 bp | CAGGCCCTTGAAGTAAATGGTGTTAACCAGAACCAGGGCAGTGAGCTCGTTAATAGTCAGAGGACTTGTTaGCTTTTCGATAGAGTCGGC | + |
|
Preference number: 4 (lower is better) Translates to: QALEVNGVNQNQGSELVNSQRTC*LFDRVG Trigger: GCCGACTCTATCGAAAAGCCAACAAGTCCTCTGACT...ATTAACGAGCTCACTGCCCTGGTTCTGGTTAACACCATTTACTTCAAGGGCCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195438.6 |
||
| CDS-3UTR CCA 90 bp | AACTACACGAAGCTTCTAGCTGCTGGAAGAAGTGTGCCTTCCTGGCTTTTAAGTGTTAATGGCGCCCTGTaGGATGACATCTTTGATGCG | + |
|
Preference number: 4 (lower is better) Translates to: NYTKLLAAGRSVPSWLLSVNGAL*DDIFDA Trigger: CGCATCAAAGATGTCATCCCACAGGGCGCCATTAAC...ACTTAAAAGCCAGGAAGGCACACTTCTTCCAGCAGCTAGAAGCTTCGTGTAGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064725.11 |
||
| CDS-3UTR CCA 90 bp | AGCAGACCTTTGATTCCCTTCAGATGGACCTATTCTGAAGGAAGGAACGATATCACGATCCCTGGGAGTTaGGACTTTTCAGGGCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SRPLIPFRWTYSEGRNDITIPGS*DFSGLK Trigger: CTTCAGCCCTGAAAAGTCCCAACTCCCAGGGATCGT...GATATCGTTCCTTCCTTCAGAATAGGTCCATCTGAAGGGAATCAAAGGTCTGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064725.11 |
||
| CDS-3UTR GCA 90 bp | AACTACACGAAGCTTCTAGCTGCTGGAAGAAGTGTGCCTTCCTGGCTTTTAAGTTCGCTGCTGCTTCACTaGCTTCCTCATTTACCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: NYTKLLAAGRSVPSWLLSSLLLH*LPHLPQ Trigger: TTGAGGTAAATGAGGAAGGCAGTGAAGCAGCAGCGA...ACTTAAAAGCCAGGAAGGCACACTTCTTCCAGCAGCTAGAAGCTTCGTGTAGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064725.11 |
||
| CDS-3UTR CCA 90 bp | AGATGTGTGTCTTACATCTGCAACAGTTATGCCGTTAATAGTAAAGATGCCTCAAGACCCGCCGGTTGGTaGCTTCTGGAACCTTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: RCVSYICNSYAVNSKDASRPAGW*LLEPSA Trigger: AGCAGAAGGTTCCAGAAGCCACCAACCGGCGGGTCT...TGAGGCATCTTTACTATTAACGGCATAACTGTTGCAGATGTAAGACACACATCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064725.11 |
||
| CDS-3UTR CCA 90 bp | AGCAGACCTTTGATTCCCTTCAGATGGACCTATTCTGAAGGAAGGAACGATATCCTCCAAAAAGGCGGTTaGCTGATACCAAGTCAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SRPLIPFRWTYSEGRNDILQKGG*LIPSQR Trigger: CCTCTGACTTGGTATCAGCCAACCGCCTTTTTGGAG...GATATCGTTCCTTCCTTCAGAATAGGTCCATCTGAAGGGAATCAAAGGTCTGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064725.11 |
||
| CDS-3UTR CCA 90 bp | CACTTGAGATGTGTGTCTTACATCTGCAACAGTTATGCCGTTAATAGTAAAGATGCTCCTGCTCCACCTTaGCCAGGCTCTTCTCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: HLRCVSYICNSYAVNSKDAPAPP*PGSSQA Trigger: AGCCTGAGAAGAGCCTGGCCAAGGTGGAGCAGGAGC...ATCTTTACTATTAACGGCATAACTGTTGCAGATGTAAGACACACATCTCAAGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064725.11 |
||
| 3UTR CAA 72 bp | GGAGGGAAGCTGAGGGAAAACTGTTGCCAGACCTTGTaGGGTTTAACCACATTTCTTTGTCCTTTACCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: GGKLRENCCQTL*GLTTFLCPLPH Trigger: ATGGGGTAAAGGACAAAGAAATGTGGTTAAACCCAACAAGGTCTGGCAACAGTTTTCCCTCAGCTTCCCTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064725.11 |
||
| 3UTR CAA 72 bp | TCAGGAGGGAAGCTGAGGGAAAACTGTTGCCAGACCTaGTTGGGTTTAACCACATTTCTTTGTCCTTTACCC | + |
|
Preference number: 4 (lower is better) Translates to: SGGKLRENCCQT*LGLTTFLCPLP Trigger: GGGTAAAGGACAAAGAAATGTGGTTAAACCCAACAAGGTCTGGCAACAGTTTTCCCTCAGCTTCCCTCCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064725.11 |
||
| CDS-3UTR GCA 90 bp | AGATGTGTGTCTTACATCTGCAACAGTTATGCCGTTAATAGTAAAGATGCCTCAGCTTCTGGAACCTTCTaGTCTGAGCCATCCTCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: RCVSYICNSYAVNSKDASASGTF*SEPSSS Trigger: CGAGGAGGATGGCTCAGAGCAGAAGGTTCCAGAAGC...TGAGGCATCTTTACTATTAACGGCATAACTGTTGCAGATGTAAGACACACATCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064725.11 |
||
| CDS-3UTR GCA 90 bp | CATCCCAAGAAACCTCCGCAAAACAGAGGGAAACAATTAGATTTGGGTTATAGTCCCATGTCTTGCAGCTaGTCCTTCAGACTGAAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: HPKKPPQNRGKQLDLGYSPMSCS*SFRLKP Trigger: TGGCTTCAGTCTGAAGGAGCAGCTGCAAGACATGGG...ACTATAACCCAAATCTAATTGTTTCCCTCTGTTTTGCGGAGGTTTCTTGGGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064725.11 |
||
| CDS-3UTR GCA 90 bp | TTTTCACCTGCTGGTCTGCTCACAGCTTTGGCCTCCTCACTGTTTTATGTTCTAAAATGCTTTGTGGAATaGGTCGGAGACATAGAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: FSPAGLLTALASSLFYVLKCFVE*VGDIEV Trigger: GACCTCTATGTCTCCGACGCATTCCACAAAGCATTT...TAGAACATAAAACAGTGAGGAGGCCAAAGCTGTGAGCAGACCAGCAGGTGAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000064725.11 |
||
| CDS-3UTR CCA 90 bp | AGCAGACCTTTGATTCCCTTCAGATGGACCTATTCTGAAGGAAGGAACGATATCAAGAAGAAGTGGATCTaGTCGGATGTCTTCTCGGAG | + |
|
Preference number: 4 (lower is better) Translates to: SRPLIPFRWTYSEGRNDIKKKWI*SDVFSE Trigger: CTCCGAGAAGACATCCGACCAGATCCACTTCTTCTT...GATATCGTTCCTTCCTTCAGAATAGGTCCATCTGAAGGGAATCAAAGGTCTGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064725.11 |
||
| CDS-3UTR CCA 90 bp | AACTACACGAAGCTTCTAGCTGCTGGAAGAAGTGTGCCTTCCTGGCTTTTAAGTGTCGGCAGTTCAGTTTaGCAAAGAAGAAGTGGATCT | + |
|
Preference number: 4 (lower is better) Translates to: NYTKLLAAGRSVPSWLLSVGSSV*QRRSGS Trigger: AGATCCACTTCTTCTTTGCCAAACTGAACTGCCGAC...ACTTAAAAGCCAGGAAGGCACACTTCTTCCAGCAGCTAGAAGCTTCGTGTAGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064725.11 |
||
| CDS-3UTR CCA 90 bp | AACTACACGAAGCTTCTAGCTGCTGGAAGAAGTGTGCCTTCCTGGCTTTTAAGTTTGAATTTGCCTTCCTaGTACATCATAGGCACTGGG | + |
|
Preference number: 4 (lower is better) Translates to: NYTKLLAAGRSVPSWLLSLNLPS*YIIGTG Trigger: CCCAGTGCCTATGATGTACCAGGAAGGCAAATTCAA...ACTTAAAAGCCAGGAAGGCACACTTCTTCCAGCAGCTAGAAGCTTCGTGTAGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064725.11 |
||
| CDS-3UTR TCA 90 bp | AGATGTGTGTCTTACATCTGCAACAGTTATGCCGTTAATAGTAAAGATGCCTCACTCAGGGCTGAACTTTaGCTTCCACAGGCCCTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: RCVSYICNSYAVNSKDASLRAEL*LPQALE Trigger: TTCAAGGGCCTGTGGAAGTCAAAGTTCAGCCCTGAG...TGAGGCATCTTTACTATTAACGGCATAACTGTTGCAGATGTAAGACACACATCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064725.11 |
||
| CDS-3UTR GCA 90 bp | AGATGTGTGTCTTACATCTGCAACAGTTATGCCGTTAATAGTAAAGATGCCTCAATGAGGCCCATGTCTTaGAGCTGCTCCTTCAGACTG | + |
|
Preference number: 4 (lower is better) Translates to: RCVSYICNSYAVNSKDASMRPMS*SCSFRL Trigger: CAGTCTGAAGGAGCAGCTGCAAGACATGGGCCTCAT...TGAGGCATCTTTACTATTAACGGCATAACTGTTGCAGATGTAAGACACACATCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064725.11 |
||
| 3UTR CAA 72 bp | TTACGAAATCACAAAAAGATTTCACTTCAGCTGCTATaGAGTGACAGTGGGAATCAAACTGCAGCCTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LRNHKKISLQLL*SDSGNQTAASS Trigger: GGAGGAGGCTGCAGTTTGATTCCCACTGTCACTCAATAGCAGCTGAAGTGAAATCTTTTTGTGATTTCGTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064725.11 |
||
| 3UTR CAA 72 bp | AAGAAACCTCCGCAAAACAGAGGGAAACAATTAGATTaGGGTTATAGTTGTCACATTACGAAATCACAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: KKPPQNRGKQLD*GYSCHITKSQK Trigger: TTTTTGTGATTTCGTAATGTGACAACTATAACCCAAATCTAATTGTTTCCCTCTGTTTTGCGGAGGTTTCTT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064725.11 |
||
| CDS GCA 90 bp | TTGGACAGTTCCCAGACCCGCCGGTTGGTGGCTTCTGGAACCTTCTaGTCTGAGCCATCCTCCTCGGTGGCCTTCTTCCCAGGGGAGCGG | + |
|
Preference number: 5 (lower is better) Translates to: LDSSQTRRLVASGTF*SEPSSSVAFFPGER Trigger: CCGCTCCCCTGGGAAGAAGGCCACCGAGGAGGATGGCTCAGAGCAGAAGGTTCCAGAAGCCACCAACCGGCGGGTCTGGGAACTGTCCAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064725.11 ENSMUST00000194592.2 ENSMUST00000195760.2 |
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| CDS CCA 90 bp | CAAATCGCGAATTGGCCTTGGACAGTTCCCAGACCCGCCGGTTGGTaGCTTCTGGAACCTTCTGCTCTGAGCCATCCTCCTCGGTGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: QIANWPWTVPRPAGW*LLEPSALSHPPRWP Trigger: AGGCCACCGAGGAGGATGGCTCAGAGCAGAAGGTTCCAGAAGCCACCAACCGGCGGGTCTGGGAACTGTCCAAGGCCAATTCGCGATTTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064725.11 ENSMUST00000194592.2 ENSMUST00000195760.2 |
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| CDS CCA 90 bp | TGGCAAATCGCGAATTGGCCTTGGACAGTTCCCAGACCCGCCGGTTaGTGGCTTCTGGAACCTTCTGCTCTGAGCCATCCTCCTCGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: WQIANWPWTVPRPAG*WLLEPSALSHPPRW Trigger: CCACCGAGGAGGATGGCTCAGAGCAGAAGGTTCCAGAAGCCACCAACCGGCGGGTCTGGGAACTGTCCAAGGCCAATTCGCGATTTGCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064725.11 ENSMUST00000194592.2 ENSMUST00000195760.2 |
||
| CDS-3UTR CAA 90 bp | GTGCTCCCAGGGTCCGTTTTCACCTGCTGGTCTGCTCACAGCTTTGGCCTCCTCAGGCTCTTCTCAGGCTaGGGCAGGATGAGCACCATG | + |
|
Preference number: 5 (lower is better) Translates to: VLPGSVFTCWSAHSFGLLRLFSG*GRMSTM Trigger: CATGGTGCTCATCCTGCCCAAGCCTGAGAAGAGCCT...GAGGAGGCCAAAGCTGTGAGCAGACCAGCAGGTGAAAACGGACCCTGGGAGCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064725.11 |
||
| CDS-3UTR CAA 90 bp | GTGCTCCCAGGGTCCGTTTTCACCTGCTGGTCTGCTCACAGCTTTGGCCTCCTCACCAGGAAGGGCCTGTaGGCCTTGAAGGTCACCCTA | + |
|
Preference number: 5 (lower is better) Translates to: VLPGSVFTCWSAHSFGLLTRKGL*ALKVTL Trigger: TAGGGTGACCTTCAAGGCCAACAGGCCCTTCCTGGT...GAGGAGGCCAAAGCTGTGAGCAGACCAGCAGGTGAAAACGGACCCTGGGAGCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064725.11 |
||
| CDS CCA 90 bp | GGTTGGTGGCTTCTGGAACCTTCTGCTCTGAGCCATCCTCCTCGGTaGCCTTCTTCCCAGGGGAGCGGTAAATGCACAAGGGATTCACGG | + |
|
Preference number: 5 (lower is better) Translates to: GWWLLEPSALSHPPR*PSSQGSGKCTRDSR Trigger: CCGTGAATCCCTTGTGCATTTACCGCTCCCCTGGGAAGAAGGCCACCGAGGAGGATGGCTCAGAGCAGAAGGTTCCAGAAGCCACCAACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064725.11 ENSMUST00000194592.2 ENSMUST00000195760.2 |
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| CDS-3UTR CAA 90 bp | ATGGTGTTAACCAGAACCAGGGCAGTGAGCTCGTTAATGGCGCCCTGTGGGATGGCTCCGGATTTCACCTaGAAGTCCAGGGGCTGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: MVLTRTRAVSSLMAPCGMAPDFT*KSRGWS Trigger: GCTCCAGCCCCTGGACTTCAAGGTGAAATCCGGAGC...CATCCCACAGGGCGCCATTAACGAGCTCACTGCCCTGGTTCTGGTTAACACCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195438.6 |
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| CDS-3UTR CAA 90 bp | CCACTGGTCACTGTGAAAAATAGATCACACTGGACTCAGAGGCCAGAACCCAGGTGCTCCGGATTCTCCTaGAAGTCCAGGGGCTGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: PLVTVKNRSHWTQRPEPRCSGFS*KSRGWS Trigger: GCTCCAGCCCCTGGACTTCAAGGAGAATCCGGAGCA...CCTGGGTTCTGGCCTCTGAGTCCAGTGTGATCTATTTTTCACAGTGACCAGTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000064725.11 |
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| CDS-3UTR CAA 90 bp | TCTGCACTGAGGGTTCTCAGTCTCCCTAGTGAGGGAAAGTGCATTGGCAGAGCGGCCACGCGCCGGTATTaGAATTTGCCTTCCTGGTAC | + |
|
Preference number: 5 (lower is better) Translates to: SALRVLSLPSEGKCIGRAATRRY*NLPSWY Trigger: GTACCAGGAAGGCAAATTCAAATACCGGCGCGTGGC...CGCTCTGCCAATGCACTTTCCCTCACTAGGGAGACTGAGAACCCTCAGTGCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064725.11 |
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| CDS-3UTR CAA 90 bp | CCCCCAAGCCTTCTTCAATCATCACATGTGAACCCTCCCTTCCCCTTTACTGAAAGCTCCTGCTCCACCTaGGCCAGGCTCTTCTCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: PPSLLQSSHVNPPFPFTESSCST*ARLFSG Trigger: GCCTGAGAAGAGCCTGGCCAAGGTGGAGCAGGAGCT...TTCAGTAAAGGGGAAGGGAGGGTTCACATGTGATGATTGAAGAAGGCTTGGGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000064725.11 |
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| CDS-3UTR CAA 90 bp | GTGCTCCCAGGGTCCGTTTTCACCTGCTGGTCTGCTCACAGCTTTGGCCTCCTCAGGAAAATGTTGTCGTaGTCATTCTTGGAGTCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: VLPGSVFTCWSAHSFGLLRKMLS*SFLESA Trigger: GGCAGACTCCAAGAATGACAACGACAACATTTTCCT...GAGGAGGCCAAAGCTGTGAGCAGACCAGCAGGTGAAAACGGACCCTGGGAGCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064725.11 |
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| CDS-3UTR CAA 90 bp | ATGGTGTTAACCAGAACCAGGGCAGTGAGCTCGTTAATGGCGCCCTGTGGGATGACCTCCATCAGCTGCTaGAGAGTGTCGTTACAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: MVLTRTRAVSSLMAPCGMTSISC*RVSLQA Trigger: TGCCTGTAACGACACTCTCAAGCAGCTGATGGAGGT...CATCCCACAGGGCGCCATTAACGAGCTCACTGCCCTGGTTCTGGTTAACACCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195438.6 |
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| CDS-3UTR CAA 90 bp | ATACCTCTGAGAAGGCGGGGCTGGCTGTGTGCATCTTGTCTCCTAAGACTGTTTGTGGCAAATCGCGAATaGGCCTTGGACAGTTCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: IPLRRRGWLCASCLLRLFVANRE*ALDSSQ Trigger: CTGGGAACTGTCCAAGGCCAATTCGCGATTTGCCAC...AAACAGTCTTAGGAGACAAGATGCACACAGCCAGCCCCGCCTTCTCAGAGGTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064725.11 |
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| CDS GCA 90 bp | CCTTCAGTCTTATTAGCTACCCAGTTGTTGATGGTCACTCTGGATTaGTCCGGATTCTCCTTGAAGTCCAGGGGCTGGAGCTTGGCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: PSVLLATQLLMVTLD*SGFSLKSRGWSLAP Trigger: TGGAGCCAAGCTCCAGCCCCTGGACTTCAAGGAGAATCCGGAGCAATCCAGAGTGACCATCAACAACTGGGTAGCTAATAAGACTGAAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064725.11 ENSMUST00000194592.2 |
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| CDS CCA 90 bp | GGTGTTAACCAGAACCAGGGCAGTGAGCTCGTTAATGGCGCCCTGTaGGATGACATCTTTGATGCGGCCTTCAGTCTTATTAGCTACCCA | + |
|
Preference number: 5 (lower is better) Translates to: GVNQNQGSELVNGAL*DDIFDAAFSLISYP Trigger: TGGGTAGCTAATAAGACTGAAGGCCGCATCAAAGATGTCATCCCACAGGGCGCCATTAACGAGCTCACTGCCCTGGTTCTGGTTAACACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064725.11 ENSMUST00000194592.2 |
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| CDS-3UTR CAA 90 bp | CGTTTTCACCTGCTGGTCTGCTCACAGCTTTGGCCTCCTCACTGTTTTATGTTCACCTCCATCAGCTGCTaGAGAGTGTCGTTACAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: RFHLLVCSQLWPPHCFMFTSISC*RVSLQA Trigger: TGCCTGTAACGACACTCTCAAGCAGCTGATGGAGGT...GAACATAAAACAGTGAGGAGGCCAAAGCTGTGAGCAGACCAGCAGGTGAAAACG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064725.11 |
||
| CDS-3UTR CAA 90 bp | CTTCCACAGGCCCTTGAAGTAAATGGTGTTAACCAGAACCAGGGCAGTGAGCTCTCTCCAAAAAGGCGGTaGGCTGATACCAAGTCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: LPQALEVNGVNQNQGSELSPKRR*ADTKSE Trigger: CTCTGACTTGGTATCAGCCAACCGCCTTTTTGGAGA...GAGCTCACTGCCCTGGTTCTGGTTAACACCATTTACTTCAAGGGCCTGTGGAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000195438.6 |
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| CDS-3UTR CAA 90 bp | TTTTCACCTGCTGGTCTGCTCACAGCTTTGGCCTCCTCACTGTTTTATGTTCTAAAGGGCCTGTTGGCCTaGAAGGTCACCCTATTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: FSPAGLLTALASSLFYVLKGLLA*KVTLLG Trigger: CCCCAATAGGGTGACCTTCAAGGCCAACAGGCCCTT...TAGAACATAAAACAGTGAGGAGGCCAAAGCTGTGAGCAGACCAGCAGGTGAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064725.11 |
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| CDS-3UTR CAA 90 bp | AGCAGACCTTTGATTCCCTTCAGATGGACCTATTCTGAAGGAAGGAACGATATCAATCGCGAATTGGCCTaGGACAGTTCCCAGACCCGC | + |
|
Preference number: 5 (lower is better) Translates to: SRPLIPFRWTYSEGRNDINRELA*DSSQTR Trigger: GCGGGTCTGGGAACTGTCCAAGGCCAATTCGCGATT...GATATCGTTCCTTCCTTCAGAATAGGTCCATCTGAAGGGAATCAAAGGTCTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064725.11 |
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| CDS TCA 90 bp | CCGGTATTTGAATTTGCCTTCCTGGTACATCATAGGCACTGGGCATaGCTGCCCATCGACCTTATAGAACGGTTCCTTCCTTGTGTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: PVFEFAFLVHHRHWA*LPIDLIERFLPCVL Trigger: GAGAACACAAGGAAGGAACCGTTCTATAAGGTCGATGGGCAGTCATGCCCAGTGCCTATGATGTACCAGGAAGGCAAATTCAAATACCGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064725.11 |
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| CDS CCA 90 bp | AGTCAGAGGACTTGTTGGCTTTTCGATAGAGTCGGCAGTTCAGTTTaGCAAAGAAGAAGTGGATCTGGTCGGATGTCTTCTCGGAGATGG | + |
|
Preference number: 5 (lower is better) Translates to: SQRTCWLFDRVGSSV*QRRSGSGRMSSRRW Trigger: CCATCTCCGAGAAGACATCCGACCAGATCCACTTCTTCTTTGCCAAACTGAACTGCCGACTCTATCGAAAAGCCAACAAGTCCTCTGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000064725.11 ENSMUST00000191936.2 ENSMUST00000194592.2 ENSMUST00000195438.6 |
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| CDS-3UTR CAA 90 bp | CGTTTTCACCTGCTGGTCTGCTCACAGCTTTGGCCTCCTCACTGTTTTATGTTCTTAGCTACCCAGTTGTaGATGGTCACTCTGGATTGC | + |
|
Preference number: 5 (lower is better) Translates to: RFHLLVCSQLWPPHCFMFLATQL*MVTLDC Trigger: GCAATCCAGAGTGACCATCAACAACTGGGTAGCTAA...GAACATAAAACAGTGAGGAGGCCAAAGCTGTGAGCAGACCAGCAGGTGAAAACG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064725.11 |
||
| CDS-3UTR CAA 90 bp | CGTTTTCACCTGCTGGTCTGCTCACAGCTTTGGCCTCCTCACTGTTTTATGTTCACCTCAAGAAATGCTTaGTGGAATGCGTCGGAGACA | + |
|
Preference number: 5 (lower is better) Translates to: RFHLLVCSQLWPPHCFMFTSRNA*WNASET Trigger: TGTCTCCGACGCATTCCACAAAGCATTTCTTGAGGT...GAACATAAAACAGTGAGGAGGCCAAAGCTGTGAGCAGACCAGCAGGTGAAAACG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064725.11 |
||
| CDS-3UTR CAA 90 bp | TTTTCACCTGCTGGTCTGCTCACAGCTTTGGCCTCCTCACTGTTTTATGTTCTATTACAGGCACCCAGCTaGGTCATAGCAAAAGCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: FSPAGLLTALASSLFYVLLQAPS*VIAKAV Trigger: CACTGCTTTTGCTATGACCAAGCTGGGTGCCTGTAA...TAGAACATAAAACAGTGAGGAGGCCAAAGCTGTGAGCAGACCAGCAGGTGAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000064725.11 |
||
| CDS-3UTR CAA 90 bp | CAGGCCCTTGAAGTAAATGGTGTTAACCAGAACCAGGGCAGTGAGCTCGTTAATTTAGCTACCCAGTTGTaGATGGTCACTCTGGATTGC | + |
|
Preference number: 5 (lower is better) Translates to: QALEVNGVNQNQGSELVNLATQL*MVTLDC Trigger: GCAATCCAGAGTGACCATCAACAACTGGGTAGCTAA...ATTAACGAGCTCACTGCCCTGGTTCTGGTTAACACCATTTACTTCAAGGGCCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195438.6 |
||
| CDS CCA 90 bp | TGTCTCCAAAAAGGCGGTTGGCTGATACCAAGTCAGAGGACTTGTTaGCTTTTCGATAGAGTCGGCAGTTCAGTTTGGCAAAGAAGAAGT | + |
|
Preference number: 5 (lower is better) Translates to: CLQKGGWLIPSQRTC*LFDRVGSSVWQRRS Trigger: ACTTCTTCTTTGCCAAACTGAACTGCCGACTCTATCGAAAAGCCAACAAGTCCTCTGACTTGGTATCAGCCAACCGCCTTTTTGGAGACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000064725.11 ENSMUST00000191936.2 ENSMUST00000194592.2 ENSMUST00000195438.6 |
||
| CDS-3UTR CAA 90 bp | CATCCCAAGAAACCTCCGCAAAACAGAGGGAAACAATTAGATTTGGGTTATAGTTTGTCGTTGTCATTCTaGGAGTCTGCCAGGTGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: HPKKPPQNRGKQLDLGYSLSLSF*ESARCW Trigger: CCAGCACCTGGCAGACTCCAAGAATGACAACGACAA...ACTATAACCCAAATCTAATTGTTTCCCTCTGTTTTGCGGAGGTTTCTTGGGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064725.11 |
||
| CDS-3UTR CAA 90 bp | CACTTGAGATGTGTGTCTTACATCTGCAACAGTTATGCCGTTAATAGTAAAGATGTGATGTCATCCCCCTaGAAGGGCAGCTCTAGCACC | + |
|
Preference number: 5 (lower is better) Translates to: HLRCVSYICNSYAVNSKDVMSSP*KGSSST Trigger: GGTGCTAGAGCTGCCCTTCAAGGGGGATGACATCAC...ATCTTTACTATTAACGGCATAACTGTTGCAGATGTAAGACACACATCTCAAGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064725.11 |
||
| CDS-3UTR CAA 90 bp | CACTTGAGATGTGTGTCTTACATCTGCAACAGTTATGCCGTTAATAGTAAAGATAATGAGGCCCATGTCTaGCAGCTGCTCCTTCAGACT | + |
|
Preference number: 5 (lower is better) Translates to: HLRCVSYICNSYAVNSKDNEAHV*QLLLQT Trigger: AGTCTGAAGGAGCAGCTGCAAGACATGGGCCTCATT...ATCTTTACTATTAACGGCATAACTGTTGCAGATGTAAGACACACATCTCAAGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064725.11 |
||
| CDS-3UTR CAA 90 bp | CACTTGAGATGTGTGTCTTACATCTGCAACAGTTATGCCGTTAATAGTAAAGATAACGATCCCTGGGAGTaGGGACTTTTCAGGGCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: HLRCVSYICNSYAVNSKDNDPWE*GLFRAE Trigger: TTCAGCCCTGAAAAGTCCCAACTCCCAGGGATCGTT...ATCTTTACTATTAACGGCATAACTGTTGCAGATGTAAGACACACATCTCAAGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064725.11 |
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| CDS-3UTR CAA 90 bp | TATGCAGTTTATGCAAATTATACCACACTGGACAAAACACAAAGGTGGGGAGTGGGTGACAGGAAAATGTaGTCGTTGTCATTCTTGGAG | + |
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Preference number: 5 (lower is better) Translates to: YAVYANYTTLDKTQRWGVGDRKM*SLSFLE Trigger: CTCCAAGAATGACAACGACAACATTTTCCTGTCACC...CACTCCCCACCTTTGTGTTTTGTCCAGTGTGGTATAATTTGCATAAACTGCATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000064725.11 |
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| CDS-3UTR CAA 90 bp | CACTTGAGATGTGTGTCTTACATCTGCAACAGTTATGCCGTTAATAGTAAAGATTCTCCAAAAAGGCGGTaGGCTGATACCAAGTCAGAG | + |
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Preference number: 5 (lower is better) Translates to: HLRCVSYICNSYAVNSKDSPKRR*ADTKSE Trigger: CTCTGACTTGGTATCAGCCAACCGCCTTTTTGGAGA...ATCTTTACTATTAACGGCATAACTGTTGCAGATGTAAGACACACATCTCAAGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064725.11 |
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| CDS-3UTR CAA 90 bp | AGATGTGTGTCTTACATCTGCAACAGTTATGCCGTTAATAGTAAAGATGCCTCACGCCGGTATTTGAATTaGCCTTCCTGGTACATCATA | + |
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Preference number: 5 (lower is better) Translates to: RCVSYICNSYAVNSKDASRRYLN*PSWYII Trigger: TATGATGTACCAGGAAGGCAAATTCAAATACCGGCG...TGAGGCATCTTTACTATTAACGGCATAACTGTTGCAGATGTAAGACACACATCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064725.11 |
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| CDS GCA 72 bp | TCCCAGACCCGCCGGTTGGTGGCTTCTGGAACCTTCTaGTCTGAGCCATCCTCCTCGGTGGCCTTCTTCCCA | + |
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Preference number: 6 (lower is better) Translates to: SQTRRLVASGTF*SEPSSSVAFFP Trigger: TGGGAAGAAGGCCACCGAGGAGGATGGCTCAGAGCAGAAGGTTCCAGAAGCCACCAACCGGCGGGTCTGGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064725.11 ENSMUST00000194592.2 ENSMUST00000195760.2 |
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| CDS CAA 72 bp | CGCGAATTGGCCTTGGACAGTTCCCAGACCCGCCGGTaGGTGGCTTCTGGAACCTTCTGCTCTGAGCCATCC | + |
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Preference number: 6 (lower is better) Translates to: RELALDSSQTRR*VASGTFCSEPS Trigger: GGATGGCTCAGAGCAGAAGGTTCCAGAAGCCACCAACCGGCGGGTCTGGGAACTGTCCAAGGCCAATTCGCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064725.11 ENSMUST00000194592.2 ENSMUST00000195760.2 |
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| CDS CAA 90 bp | GTGGCAAATCGCGAATTGGCCTTGGACAGTTCCCAGACCCGCCGGTaGGTGGCTTCTGGAACCTTCTGCTCTGAGCCATCCTCCTCGGTG | + |
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Preference number: 6 (lower is better) Translates to: VANRELALDSSQTRR*VASGTFCSEPSSSV Trigger: CACCGAGGAGGATGGCTCAGAGCAGAAGGTTCCAGAAGCCACCAACCGGCGGGTCTGGGAACTGTCCAAGGCCAATTCGCGATTTGCCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064725.11 ENSMUST00000194592.2 ENSMUST00000195760.2 |
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| CDS CCA 72 bp | GCGAATTGGCCTTGGACAGTTCCCAGACCCGCCGGTTaGTGGCTTCTGGAACCTTCTGCTCTGAGCCATCCT | + |
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Preference number: 6 (lower is better) Translates to: ANWPWTVPRPAG*WLLEPSALSHP Trigger: AGGATGGCTCAGAGCAGAAGGTTCCAGAAGCCACCAACCGGCGGGTCTGGGAACTGTCCAAGGCCAATTCGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064725.11 ENSMUST00000194592.2 ENSMUST00000195760.2 |
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| CDS CAA 90 bp | AAGGGCAGCTCTAGCACCTGGGTGCCCTCTGCCACGCGCCGGTATTaGAATTTGCCTTCCTGGTACATCATAGGCACTGGGCATGACTGC | + |
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Preference number: 6 (lower is better) Translates to: KGSSSTWVPSATRRY*NLPSWYIIGTGHDC Trigger: GCAGTCATGCCCAGTGCCTATGATGTACCAGGAAGGCAAATTCAAATACCGGCGCGTGGCAGAGGGCACCCAGGTGCTAGAGCTGCCCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064725.11 |
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| CDS CCA 72 bp | CTTCTGGAACCTTCTGCTCTGAGCCATCCTCCTCGGTaGCCTTCTTCCCAGGGGAGCGGTAAATGCACAAGG | + |
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Preference number: 6 (lower is better) Translates to: LLEPSALSHPPR*PSSQGSGKCTR Trigger: CCTTGTGCATTTACCGCTCCCCTGGGAAGAAGGCCACCGAGGAGGATGGCTCAGAGCAGAAGGTTCCAGAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064725.11 ENSMUST00000194592.2 ENSMUST00000195760.2 |
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| CDS CCA 72 bp | AATTGGCCTTGGACAGTTCCCAGACCCGCCGGTTGGTaGCTTCTGGAACCTTCTGCTCTGAGCCATCCTCCT | + |
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Preference number: 6 (lower is better) Translates to: NWPWTVPRPAGW*LLEPSALSHPP Trigger: AGGAGGATGGCTCAGAGCAGAAGGTTCCAGAAGCCACCAACCGGCGGGTCTGGGAACTGTCCAAGGCCAATT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064725.11 ENSMUST00000194592.2 ENSMUST00000195760.2 |
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| CDS CAA 90 bp | GCCTTCAGTCTTATTAGCTACCCAGTTGTTGATGGTCACTCTGGATaGCTCCGGATTCTCCTTGAAGTCCAGGGGCTGGAGCTTGGCTCC | + |
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Preference number: 6 (lower is better) Translates to: AFSLISYPVVDGHSG*LRILLEVQGLELGS Trigger: GGAGCCAAGCTCCAGCCCCTGGACTTCAAGGAGAATCCGGAGCAATCCAGAGTGACCATCAACAACTGGGTAGCTAATAAGACTGAAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064725.11 ENSMUST00000194592.2 |
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| CDS GCA 72 bp | TTATTAGCTACCCAGTTGTTGATGGTCACTCTGGATTaGTCCGGATTCTCCTTGAAGTCCAGGGGCTGGAGC | + |
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Preference number: 6 (lower is better) Translates to: LLATQLLMVTLD*SGFSLKSRGWS Trigger: GCTCCAGCCCCTGGACTTCAAGGAGAATCCGGAGCAATCCAGAGTGACCATCAACAACTGGGTAGCTAATAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064725.11 ENSMUST00000194592.2 |
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| CDS CAA 72 bp | CTTATTAGCTACCCAGTTGTTGATGGTCACTCTGGATaGCTCCGGATTCTCCTTGAAGTCCAGGGGCTGGAG | + |
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Preference number: 6 (lower is better) Translates to: LISYPVVDGHSG*LRILLEVQGLE Trigger: CTCCAGCCCCTGGACTTCAAGGAGAATCCGGAGCAATCCAGAGTGACCATCAACAACTGGGTAGCTAATAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064725.11 ENSMUST00000194592.2 |
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| CDS TCA 72 bp | GAATTTGCCTTCCTGGTACATCATAGGCACTGGGCATaGCTGCCCATCGACCTTATAGAACGGTTCCTTCCT | + |
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Preference number: 6 (lower is better) Translates to: EFAFLVHHRHWA*LPIDLIERFLP Trigger: AGGAAGGAACCGTTCTATAAGGTCGATGGGCAGTCATGCCCAGTGCCTATGATGTACCAGGAAGGCAAATTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064725.11 |
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| CDS CAA 90 bp | GGGATGACATCTTTGATGCGGCCTTCAGTCTTATTAGCTACCCAGTaGTTGATGGTCACTCTGGATTGCTCCGGATTCTCCTTGAAGTCC | + |
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Preference number: 6 (lower is better) Translates to: GMTSLMRPSVLLATQ*LMVTLDCSGFSLKS Trigger: GGACTTCAAGGAGAATCCGGAGCAATCCAGAGTGACCATCAACAACTGGGTAGCTAATAAGACTGAAGGCCGCATCAAAGATGTCATCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064725.11 ENSMUST00000194592.2 |
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| CDS CCA 72 bp | AAAGGCGGTTGGCTGATACCAAGTCAGAGGACTTGTTaGCTTTTCGATAGAGTCGGCAGTTCAGTTTGGCAA | + |
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Preference number: 6 (lower is better) Translates to: KGGWLIPSQRTC*LFDRVGSSVWQ Trigger: TTGCCAAACTGAACTGCCGACTCTATCGAAAAGCCAACAAGTCCTCTGACTTGGTATCAGCCAACCGCCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000064725.11 ENSMUST00000191936.2 ENSMUST00000194592.2 ENSMUST00000195438.6 |
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| CDS CAA 72 bp | CTGGAGCTTGGCTCCATAGACAACCTCACTAACATCTaGATAGCTCTCGTTGAAGGTGAGGGATTTGTCTCC | + |
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Preference number: 6 (lower is better) Translates to: LELGSIDNLTNI*IALVEGEGFVS Trigger: GGAGACAAATCCCTCACCTTCAACGAGAGCTATCAAGATGTTAGTGAGGTTGTCTATGGAGCCAAGCTCCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000064725.11 ENSMUST00000191936.2 ENSMUST00000194592.2 ENSMUST00000195438.6 |
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| CDS CAA 72 bp | TTGATGCGGCCTTCAGTCTTATTAGCTACCCAGTTGTaGATGGTCACTCTGGATTGCTCCGGATTCTCCTTG | + |
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Preference number: 6 (lower is better) Translates to: LMRPSVLLATQL*MVTLDCSGFSL Trigger: CAAGGAGAATCCGGAGCAATCCAGAGTGACCATCAACAACTGGGTAGCTAATAAGACTGAAGGCCGCATCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064725.11 ENSMUST00000194592.2 |
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| CDS CAA 72 bp | TCTTTGATGCGGCCTTCAGTCTTATTAGCTACCCAGTaGTTGATGGTCACTCTGGATTGCTCCGGATTCTCC | + |
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Preference number: 6 (lower is better) Translates to: SLMRPSVLLATQ*LMVTLDCSGFS Trigger: GGAGAATCCGGAGCAATCCAGAGTGACCATCAACAACTGGGTAGCTAATAAGACTGAAGGCCGCATCAAAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064725.11 ENSMUST00000194592.2 |
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| CDS CAA 90 bp | ATGACATCTTTGATGCGGCCTTCAGTCTTATTAGCTACCCAGTTGTaGATGGTCACTCTGGATTGCTCCGGATTCTCCTTGAAGTCCAGG | + |
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Preference number: 6 (lower is better) Translates to: MTSLMRPSVLLATQL*MVTLDCSGFSLKSR Trigger: CCTGGACTTCAAGGAGAATCCGGAGCAATCCAGAGTGACCATCAACAACTGGGTAGCTAATAAGACTGAAGGCCGCATCAAAGATGTCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064725.11 ENSMUST00000194592.2 |
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| CDS CCA 72 bp | ACTTGTTGGCTTTTCGATAGAGTCGGCAGTTCAGTTTaGCAAAGAAGAAGTGGATCTGGTCGGATGTCTTCT | + |
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Preference number: 6 (lower is better) Translates to: TCWLFDRVGSSV*QRRSGSGRMSS Trigger: AGAAGACATCCGACCAGATCCACTTCTTCTTTGCCAAACTGAACTGCCGACTCTATCGAAAAGCCAACAAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000064725.11 ENSMUST00000191936.2 ENSMUST00000194592.2 ENSMUST00000195438.6 |
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