Pregenerated sensors for SERPINB9H (Mus musculus)
Ensembl gene IDs: ENSMUSG00000071452Ensembl transcript IDs: ENSMUST00000050276.9
Found 17 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | GACTCACTGCACCTGTTCCCAAACTACCATAGTATTGGGAACATACCTGGTGAGATCCATAACACTCTGTaGTCATCTGACCTGGCAAAG | + |
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Preference number: 2 (lower is better) Translates to: DSLHLFPNYHSIGNIPGEIHNTL*SSDLAK Trigger: CTTTGCCAGGTCAGATGACCACAGAGTGTTATGGAT...CTCACCAGGTATGTTCCCAATACTATGGTAGTTTGGGAACAGGTGCAGTGAGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050276.9 |
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| 3UTR-3UTR CAA 90 bp | GGCCATTTGTTAGAGGACTCACTGCACCTGTTCCCAAACTACCATAGTATTGGGATGTTTTCCACCCACTaGTCCATCCTCACAGAGCAG | + |
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Preference number: 3 (lower is better) Translates to: GHLLEDSLHLFPNYHSIGMFSTH*SILTEQ Trigger: CTGCTCTGTGAGGATGGACAAGTGGGTGGAAAACAT...CCCAATACTATGGTAGTTTGGGAACAGGTGCAGTGAGTCCTCTAACAAATGGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050276.9 |
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| CDS-3UTR CCA 90 bp | GTTCCTTCATCTTGGAACATGTTTTCCACCCACTTGTCCATCCTCACAGAGCAGTGCTTGTTCAGGTTATaGAGAAGCAACTGGAAGCCC | + |
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Preference number: 4 (lower is better) Translates to: VPSSWNMFSTHLSILTEQCLFRL*RSNWKP Trigger: GGGCTTCCAGTTGCTTCTCCATAACCTGAACAAGCA...CTGCTCTGTGAGGATGGACAAGTGGGTGGAAAACATGTTCCAAGATGAAGGAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050276.9 |
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| CDS-3UTR CCA 90 bp | GGCCATTTGTTAGAGGACTCACTGCACCTGTTCCCAAACTACCATAGTATTGGGGTAAGGCAGTACTTTTaGTTGTTTTGCTTGTTCAGG | + |
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Preference number: 4 (lower is better) Translates to: GHLLEDSLHLFPNYHSIGVRQYF*LFCLFR Trigger: CCTGAACAAGCAAAACAACCAAAAGTACTGCCTTAC...CCCAATACTATGGTAGTTTGGGAACAGGTGCAGTGAGTCCTCTAACAAATGGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000050276.9 |
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| CDS-3UTR CAA 90 bp | TCCATAACACTCTGTGGTCATCTGACCTGGCAAAGGACACAAATTAATATCAGGCCTGATAAGTCAGCCTaGCTTCCATCGAAGACATTC | + |
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Preference number: 5 (lower is better) Translates to: SITLCGHLTWQRTQINIRPDKSA*LPSKTF Trigger: GAATGTCTTCGATGGAAGCAAGGCTGACTTATCAGG...CCTGATATTAATTTGTGTCCTTTGCCAGGTCAGATGACCACAGAGTGTTATGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050276.9 |
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| CDS-3UTR CAA 90 bp | ACTCACTGCACCTGTTCCCAAACTACCATAGTATTGGGAACATACCTGGTGAGTAGGCAGTACTTTTGGTaGTTTTGCTTGTTCAGGTTA | + |
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Preference number: 5 (lower is better) Translates to: THCTCSQTTIVLGTYLVSRQYFW*FCLFRL Trigger: TAACCTGAACAAGCAAAACAACCAAAAGTACTGCCT...ACTCACCAGGTATGTTCCCAATACTATGGTAGTTTGGGAACAGGTGCAGTGAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050276.9 |
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| CDS-3UTR CAA 90 bp | GTGAAAGTTCCTTCATCTTGGAACATGTTTTCCACCCACTTGTCCATCCTCACATTCATAAACTCTGGTTaGGTCCAGGCTGTTAACTTC | + |
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Preference number: 5 (lower is better) Translates to: VKVPSSWNMFSTHLSILTFINSG*VQAVNF Trigger: GAAGTTAACAGCCTGGACCAAACCAGAGTTTATGAA...TGTGAGGATGGACAAGTGGGTGGAAAACATGTTCCAAGATGAAGGAACTTTCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050276.9 |
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| CDS-3UTR CAA 90 bp | TCCATAACACTCTGTGGTCATCTGACCTGGCAAAGGACACAAATTAATATCAGGGTACTTTTGGTTGTTTaGCTTGTTCAGGTTATGGAG | + |
|
Preference number: 5 (lower is better) Translates to: SITLCGHLTWQRTQINIRVLLVV*LVQVME Trigger: CTCCATAACCTGAACAAGCAAAACAACCAAAAGTAC...CCTGATATTAATTTGTGTCCTTTGCCAGGTCAGATGACCACAGAGTGTTATGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050276.9 |
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| CDS CAA 72 bp | ACCATTAGTCTGTTTGGAGACCCACATGTTTATGTGTaGCCTGGACTCCTCGGCAGCTTCGGCAAAAGAGAG | + |
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Preference number: 6 (lower is better) Translates to: TISLFGDPHVYV*PGLLGSFGKRE Trigger: CTCTCTTTTGCCGAAGCTGCCGAGGAGTCCAGGCAACACATAAACATGTGGGTCTCCAAACAGACTAATGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050276.9 |
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| CDS GCA 72 bp | CCTCATCTGGGAGTAGGACCACAAAATTCAAATCTATaGCCTCATAGGGCATCACTAGCACTTGTGCCTGGA | + |
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Preference number: 6 (lower is better) Translates to: PHLGVGPQNSNL*PHRASLALVPG Trigger: TCCAGGCACAAGTGCTAGTGATGCCCTATGAGGGCATAGATTTGAATTTTGTGGTCCTACTCCCAGATGAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050276.9 |
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| CDS CAA 72 bp | CCTGTTGGCCATAGTAAGGCAGTACTTTTGGTTGTTTaGCTTGTTCAGGTTATGGAGAAGCAACTGGAAGCC | + |
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Preference number: 6 (lower is better) Translates to: PVGHSKAVLLVV*LVQVMEKQLEA Trigger: GGCTTCCAGTTGCTTCTCCATAACCTGAACAAGCAAAACAACCAAAAGTACTGCCTTACTATGGCCAACAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050276.9 |
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| CDS CAA 72 bp | GGTTTGGTCCAGGCTGTTAACTTCTCAAAAGTGAGATaGTTTTCCACCTTGCTGATGTCCACACCCTCATCT | + |
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Preference number: 6 (lower is better) Translates to: GLVQAVNFSKVR*FSTLLMSTPSS Trigger: AGATGAGGGTGTGGACATCAGCAAGGTGGAAAACAATCTCACTTTTGAGAAGTTAACAGCCTGGACCAAACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050276.9 |
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| CDS CAA 72 bp | AAGAGCCTGTTGGCCATAGTAAGGCAGTACTTTTGGTaGTTTTGCTTGTTCAGGTTATGGAGAAGCAACTGG | + |
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Preference number: 6 (lower is better) Translates to: KSLLAIVRQYFW*FCLFRLWRSNW Trigger: CCAGTTGCTTCTCCATAACCTGAACAAGCAAAACAACCAAAAGTACTGCCTTACTATGGCCAACAGGCTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050276.9 |
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| CDS CAA 72 bp | TCCCGCCACATCATCTGCACTGGTCTTGTTTCCTTCTaGTTTATCTTAAAGGGCATTTCCTTGGTCCTATTT | + |
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Preference number: 6 (lower is better) Translates to: SRHIICTGLVSF*FILKGISLVLF Trigger: AAATAGGACCAAGGAAATGCCCTTTAAGATAAACAAGAAGGAAACAAGACCAGTGCAGATGATGTGGCGGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050276.9 |
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| CDS CAA 72 bp | TACAAAGAGCCTGTTGGCCATAGTAAGGCAGTACTTTaGGTTGTTTTGCTTGTTCAGGTTATGGAGAAGCAA | + |
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Preference number: 6 (lower is better) Translates to: YKEPVGHSKAVL*VVLLVQVMEKQ Trigger: TTGCTTCTCCATAACCTGAACAAGCAAAACAACCAAAAGTACTGCCTTACTATGGCCAACAGGCTCTTTGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050276.9 |
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| CDS CAA 90 bp | GACAGACACAGATTTTCCTTAGTAGACATTCCTGATAAGTCAGCCTaGCTTCCATCGAAGACATTCAAAATTCCCAAATGCTGTAACAGG | + |
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Preference number: 6 (lower is better) Translates to: DRHRFSLVDIPDKSA*LPSKTFKIPKCCNR Trigger: CCTGTTACAGCATTTGGGAATTTTGAATGTCTTCGATGGAAGCAAGGCTGACTTATCAGGAATGTCTACTAAGGAAAATCTGTGTCTGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050276.9 |
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| CDS CAA 72 bp | TTTGACAATAAGTCTGGAATTTTACCATTAGTCTGTTaGGAGACCCACATGTTTATGTGTTGCCTGGACTCC | + |
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Preference number: 6 (lower is better) Translates to: FDNKSGILPLVC*ETHMFMCCLDS Trigger: GGAGTCCAGGCAACACATAAACATGTGGGTCTCCAAACAGACTAATGGTAAAATTCCAGACTTATTGTCAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050276.9 |
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