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Pregenerated sensors for SERPINB9F (Mus musculus)

Ensembl gene IDs: ENSMUSG00000038327

Ensembl transcript IDs: ENSMUST00000075515.7

Found 10 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 72 bp CTAGATCAGAATGAAACGGTGAAAGTTCCTTCATCTTaGAACATGTTTTCCACCCACTTGTCCATCCTCACA +
Preference number: 3 (lower is better)
Translates to: LDQNETVKVPSS*NMFSTHLSILT
Trigger: TGTGAGGATGGACAAGTGGGTGGAAAACATGTTCCAAGATGAAGGAACTTTCACCGTTTCATTCTGATCTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000075515.7
3UTR CCA 72 bp ATAAAGGAATCCATAACACTCTGTGGTCATCTGACCTaGCAAAGGACACAAATTAATATCAGGGTAGGGAGA +
Preference number: 3 (lower is better)
Translates to: IKESITLCGHLT*QRTQINIRVGR
Trigger: TCTCCCTACCCTGATATTAATTTGTGTCCTTTGCCAGGTCAGATGACCACAGAGTGTTATGGATTCCTTTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000075515.7
3UTR CAA 72 bp AGGACTCACTGCACCTGTTCCCAAACTACCATAGTATaGGGAACATACCTGGTGAGTAGTAGGCAGAAAGGA +
Preference number: 4 (lower is better)
Translates to: RTHCTCSQTTIV*GTYLVSSRQKG
Trigger: TCCTTTCTGCCTACTACTCACCAGGTATGTTCCCAATACTATGGTAGTTTGGGAACAGGTGCAGTGAGTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000075515.7
CDS GCA 90 bp GGAATTTTACCATTAGTCTGTTTGGAGACCCACATGTTTATGTGTTaGCTGGACTCCTCGGCAGCTTTGGCAAAAGAGAGCTGCTCCATC +
Preference number: 5 (lower is better)
Translates to: GILPLVCLETHMFMC*LDSSAALAKESCSI
Trigger: GATGGAGCAGCTCTCTTTTGCCAAAGCTGCCGAGGAGTCCAGGCAACACATAAACATGTGGGTCTCCAAACAGACTAATGGTAAAATTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000075515.7
CDS GCA 72 bp CCATTAGTCTGTTTGGAGACCCACATGTTTATGTGTTaGCTGGACTCCTCGGCAGCTTTGGCAAAAGAGAGC +
Preference number: 6 (lower is better)
Translates to: PLVCLETHMFMC*LDSSAALAKES
Trigger: GCTCTCTTTTGCCAAAGCTGCCGAGGAGTCCAGGCAACACATAAACATGTGGGTCTCCAAACAGACTAATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000075515.7
CDS CCA 72 bp ACATGTTTATGTGTTGCCTGGACTCCTCGGCAGCTTTaGCAAAAGAGAGCTGCTCCATCTCAGAGTGGTAGA +
Preference number: 6 (lower is better)
Translates to: TCLCVAWTPRQL*QKRAAPSQSGR
Trigger: TCTACCACTCTGAGATGGAGCAGCTCTCTTTTGCCAAAGCTGCCGAGGAGTCCAGGCAACACATAAACATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000075515.7
CDS CAA 72 bp ACCATTAGTCTGTTTGGAGACCCACATGTTTATGTGTaGCCTGGACTCCTCGGCAGCTTTGGCAAAAGAGAG +
Preference number: 6 (lower is better)
Translates to: TISLFGDPHVYV*PGLLGSFGKRE
Trigger: CTCTCTTTTGCCAAAGCTGCCGAGGAGTCCAGGCAACACATAAACATGTGGGTCTCCAAACAGACTAATGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000075515.7
CDS CAA 90 bp TGGAATTTTACCATTAGTCTGTTTGGAGACCCACATGTTTATGTGTaGCCTGGACTCCTCGGCAGCTTTGGCAAAAGAGAGCTGCTCCAT +
Preference number: 6 (lower is better)
Translates to: WNFTISLFGDPHVYV*PGLLGSFGKRELLH
Trigger: ATGGAGCAGCTCTCTTTTGCCAAAGCTGCCGAGGAGTCCAGGCAACACATAAACATGTGGGTCTCCAAACAGACTAATGGTAAAATTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000075515.7
CDS CAA 72 bp CCTGTTGGCCATTCTAAGGCAGTACTTTTGGTTGTTTaGCTTGTTCAAGTTATGGAGAAGCAACTGGAAGCC +
Preference number: 6 (lower is better)
Translates to: PVGHSKAVLLVV*LVQVMEKQLEA
Trigger: GGCTTCCAGTTGCTTCTCCATAACTTGAACAAGCAAAACAACCAAAAGTACTGCCTTAGAATGGCCAACAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000075515.7
CDS CAA 90 bp GACAGACACAGGTTTTCCTTAGTAGACATTCCTGATAAGTCAGCCTaGCTTCCATCGAAGACATTCAAAATTCCCAAATGCTGTAGCAGG +
Preference number: 6 (lower is better)
Translates to: DRHRFSLVDIPDKSA*LPSKTFKIPKCCSR
Trigger: CCTGCTACAGCATTTGGGAATTTTGAATGTCTTCGATGGAAGCAAGGCTGACTTATCAGGAATGTCTACTAAGGAAAACCTGTGTCTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000075515.7