Pregenerated sensors for SERPINB9E (Mus musculus)
Ensembl gene IDs: ENSMUSG00000062342Ensembl transcript IDs: ENSMUST00000071873.4
Found 50 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CAA 90 bp | GCAAGTAAGGGCAAGTGTTGTGGTTCCAAGAAAAGACTATGTATTTaGATGCCATTGTTTGTCTGTGGATTGACTGGAGGTTTATTTAGG | + |
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Preference number: 2 (lower is better) Translates to: ASKGKCCGSKKRLCI*MPLFVCGLTGGLFR Trigger: CCTAAATAAACCTCCAGTCAATCCACAGACAAACAATGGCATCAAAATACATAGTCTTTTCTTGGAACCACAACACTTGCCCTTACTTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071873.4 |
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| 3UTR CAA 90 bp | GGCAAGTGTTGTGGTTCCAAGAAAAGACTATGTATTTTGATGCCATaGTTTGTCTGTGGATTGACTGGAGGTTTATTTAGGGTTACTTTA | + |
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Preference number: 2 (lower is better) Translates to: GKCCGSKKRLCILMP*FVCGLTGGLFRVTL Trigger: TAAAGTAACCCTAAATAAACCTCCAGTCAATCCACAGACAAACAATGGCATCAAAATACATAGTCTTTTCTTGGAACCACAACACTTGCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071873.4 |
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| 3UTR-3UTR TCA 90 bp | AATAAGGCAAGTAAGGGCAAGTGTTGTGGTTCCAAGAAAAGACTATGTATTTTGCATTGTAGGTTATCTTaGGGATTCTCTTTGCCTTCT | + |
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Preference number: 2 (lower is better) Translates to: NKASKGKCCGSKKRLCILHCRLS*GFSLPS Trigger: AGAAGGCAAAGAGAATCCTCAAGATAACCTACAATG...CAAAATACATAGTCTTTTCTTGGAACCACAACACTTGCCCTTACTTGCCTTATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071873.4 |
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| 3UTR-3UTR CCA 90 bp | TTTGTCTGTGGATTGACTGGAGGTTTATTTAGGGTTACTTTAGAGATCATTGTAATTCATAACACTCTGTaGTCATCTGTCCTGGCAAAG | + |
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Preference number: 2 (lower is better) Translates to: FVCGLTGGLFRVTLEIIVIHNTL*SSVLAK Trigger: CTTTGCCAGGACAGATGACCACAGAGTGTTATGAAT...TACAATGATCTCTAAAGTAACCCTAAATAAACCTCCAGTCAATCCACAGACAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071873.4 |
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| 3UTR-3UTR CAA 90 bp | GACTCACTGCACCTGTTCCCAAACTACCATAGTATAGGGAACATACCTGGTGAGGTAGAAGTGGTAGAGTaGCCAAGAGAGAACTCTACC | + |
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Preference number: 3 (lower is better) Translates to: DSLHLFPNYHSIGNIPGEVEVVE*PRENST Trigger: GGTAGAGTTCTCTCTTGGCAACTCTACCACTTCTAC...CTCACCAGGTATGTTCCCTATACTATGGTAGTTTGGGAACAGGTGCAGTGAGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071873.4 |
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| 3UTR-3UTR CAA 90 bp | GAGGATTCTCTTTGCCTTCTAATCTATAAGGGAATTCATAACACTCTGTGGTCAATGTTTTCCACCCACTaGTCCATTCTCACAGAGCAG | + |
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Preference number: 3 (lower is better) Translates to: EDSLCLLIYKGIHNTLWSMFSTH*SILTEQ Trigger: CTGCTCTGTGAGAATGGACAAGTGGGTGGAAAACAT...TGACCACAGAGTGTTATGAATTCCCTTATAGATTAGAAGGCAAAGAGAATCCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071873.4 |
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| 3UTR CCA 72 bp | ATAAGGGAATTCATAACACTCTGTGGTCATCTGTCCTaGCAAAGGACACAAATTAATATCAGGGTAGGGAGA | + |
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Preference number: 3 (lower is better) Translates to: IREFITLCGHLS*QRTQINIRVGR Trigger: TCTCCCTACCCTGATATTAATTTGTGTCCTTTGCCAGGACAGATGACCACAGAGTGTTATGAATTCCCTTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071873.4 |
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| 3UTR-3UTR CAA 90 bp | AGGGAATTCATAACACTCTGTGGTCATCTGTCCTGGCAAAGGACACAAATTAATGAAAGTTCCTTCATCTaGGAACATGTTTTCCACCCA | + |
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Preference number: 3 (lower is better) Translates to: REFITLCGHLSWQRTQINESSFI*EHVFHP Trigger: TGGGTGGAAAACATGTTCCAAGATGAAGGAACTTTC...ATTAATTTGTGTCCTTTGCCAGGACAGATGACCACAGAGTGTTATGAATTCCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071873.4 |
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| 3UTR CCA 72 bp | CTAGATCAGAATGAAAAGATGAAAGTTCCTTCATCTTaGAACATGTTTTCCACCCACTTGTCCATTCTCACA | + |
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Preference number: 3 (lower is better) Translates to: LDQNEKMKVPSS*NMFSTHLSILT Trigger: TGTGAGAATGGACAAGTGGGTGGAAAACATGTTCCAAGATGAAGGAACTTTCATCTTTTCATTCTGATCTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071873.4 |
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| 3UTR GCA 72 bp | TTAGAGATCATTGTAGGTTATCTTGAGGATTCTCTTTaGCTTCTAATCTATAAGGGAATTCATAACACTCTG | + |
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Preference number: 3 (lower is better) Translates to: LEIIVGYLEDSL*LLIYKGIHNTL Trigger: CAGAGTGTTATGAATTCCCTTATAGATTAGAAGGCAAAGAGAATCCTCAAGATAACCTACAATGATCTCTAA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071873.4 |
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| CDS-3UTR TCA 90 bp | GGCCATTTGTTAGAGGACTCACTGCACCTGTTCCCAAACTACCATAGTATAGGGAGCAACTGGAAGCCCTaGTGGACATCTTCATCTGGG | + |
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Preference number: 4 (lower is better) Translates to: GHLLEDSLHLFPNYHSIGSNWKP*WTSSSG Trigger: CCCAGATGAAGATGTCCATCAGGGCTTCCAGTTGCT...CCCTATACTATGGTAGTTTGGGAACAGGTGCAGTGAGTCCTCTAACAAATGGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071873.4 |
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| CDS-3UTR TCA 90 bp | GGCCATTTGTTAGAGGACTCACTGCACCTGTTCCCAAACTACCATAGTATAGGGTCTGAAGGGTTGTCTTaGCAGAGCACCTTCAAAAGA | + |
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Preference number: 4 (lower is better) Translates to: GHLLEDSLHLFPNYHSIGSEGLS*QSTFKR Trigger: TCTTTTGAAGGTGCTCTGTCAAGACAACCCTTCAGA...CCCTATACTATGGTAGTTTGGGAACAGGTGCAGTGAGTCCTCTAACAAATGGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071873.4 |
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| CDS-3UTR TCA 90 bp | TGGCAAAGGACACAAATTAATATCAGGGTAGGGAGAGCTGAATGTGGGCATCACCTTAGTAGACATTCCTaGGAAGTCAGCTTTGCTTCC | + |
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Preference number: 4 (lower is better) Translates to: WQRTQINIRVGRAECGHHLSRHS*EVSFAS Trigger: GGAAGCAAAGCTGACTTCTCAGGAATGTCTACTAAG...GTGATGCCCACATTCAGCTCTCCCTACCCTGATATTAATTTGTGTCCTTTGCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071873.4 |
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| CDS-3UTR TCA 90 bp | GGCCATTTGTTAGAGGACTCACTGCACCTGTTCCCAAACTACCATAGTATAGGGCTGTTCCTTCTTCATTaGCCTCTACTACACACTTGT | + |
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Preference number: 4 (lower is better) Translates to: GHLLEDSLHLFPNYHSIGLFLLH*PLLHTC Trigger: ACAAGTGTGTAGTAGAGGTCAATGAAGAAGGAACAG...CCCTATACTATGGTAGTTTGGGAACAGGTGCAGTGAGTCCTCTAACAAATGGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071873.4 |
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| CDS-3UTR CCA 90 bp | TGGCAAAGGACACAAATTAATATCAGGGTAGGGAGAGCTGAATGTGGGCATCACTTACACCATGTTCCTTaGAAGTATAAAGCATTGGCG | + |
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Preference number: 4 (lower is better) Translates to: WQRTQINIRVGRAECGHHLHHVP*KYKALA Trigger: CGCCAATGCTTTATACTTCCAAGGAACATGGTGTAA...GTGATGCCCACATTCAGCTCTCCCTACCCTGATATTAATTTGTGTCCTTTGCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071873.4 |
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| CDS-3UTR TCA 90 bp | GATGAAAGTTCCTTCATCTTGGAACATGTTTTCCACCCACTTGTCCATTCTCACTCTACTACACACTTGTaGACAAACTTGGACAGACAC | + |
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Preference number: 4 (lower is better) Translates to: DESSFILEHVFHPLVHSHSTTHL*TNLDRH Trigger: GTGTCTGTCCAAGTTTGTTCACAAGTGTGTAGTAGA...GTGAGAATGGACAAGTGGGTGGAAAACATGTTCCAAGATGAAGGAACTTTCATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071873.4 |
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| CDS-3UTR GCA 90 bp | CTATGTATTTTGATGCCATTGTTTGTCTGTGGATTGACTGGAGGTTTATTTAGGCTGACATATCTGGACTaGAGTGTCTCCCTTTGCACC | + |
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Preference number: 4 (lower is better) Translates to: LCILMPLFVCGLTGGLFRLTYLD*SVSLCT Trigger: GGTGCAAAGGGAGACACTGCAGTCCAGATATGTCAG...CCTAAATAAACCTCCAGTCAATCCACAGACAAACAATGGCATCAAAATACATAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071873.4 |
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| 3UTR CAA 72 bp | GGCAAGTGTTGTGGTTCCAAGAAAAGACTATGTATTTaGATGCCATTGTTTGTCTGTGGATTGACTGGAGGT | + |
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Preference number: 4 (lower is better) Translates to: GKCCGSKKRLCI*MPLFVCGLTGG Trigger: ACCTCCAGTCAATCCACAGACAAACAATGGCATCAAAATACATAGTCTTTTCTTGGAACCACAACACTTGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071873.4 |
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| CDS-3UTR GCA 90 bp | CTATGTATTTTGATGCCATTGTTTGTCTGTGGATTGACTGGAGGTTTATTTAGGCACATGTTTATGTGTTaGCTGGACTCCTCTGCAGCT | + |
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Preference number: 4 (lower is better) Translates to: LCILMPLFVCGLTGGLFRHMFMC*LDSSAA Trigger: AGCTGCAGAGGAGTCCAGGCAACACATAAACATGTG...CCTAAATAAACCTCCAGTCAATCCACAGACAAACAATGGCATCAAAATACATAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071873.4 |
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| CDS-3UTR GCA 90 bp | AGGGAATTCATAACACTCTGTGGTCATCTGTCCTGGCAAAGGACACAAATTAATCTGTTAGTTGTGCTGTaGATGATGAAGAAAAGGAAG | + |
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Preference number: 4 (lower is better) Translates to: REFITLCGHLSWQRTQINLLVVL*MMKKRK Trigger: CTTCCTTTTCTTCATCATGCACAGCACAACTAACAG...ATTAATTTGTGTCCTTTGCCAGGACAGATGACCACAGAGTGTTATGAATTCCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071873.4 |
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| CDS-3UTR TCA 90 bp | AGACTATGTATTTTGATGCCATTGTTTGTCTGTGGATTGACTGGAGGTTTATTTCAGCTTTGCTTCCATTaGAGACATCCAAGATTCCCA | + |
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Preference number: 4 (lower is better) Translates to: RLCILMPLFVCGLTGGLFQLCFH*RHPRFP Trigger: TGGGAATCTTGGATGTCTTCAATGGAAGCAAAGCTG...AAATAAACCTCCAGTCAATCCACAGACAAACAATGGCATCAAAATACATAGTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071873.4 |
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| CDS-3UTR CCA 90 bp | TGTATTTTGATGCCATTGTTTGTCTGTGGATTGACTGGAGGTTTATTTAGGGTTCCACATCATCTGCACTaGCCTTGTTTCCTTCTTATT | + |
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Preference number: 4 (lower is better) Translates to: CILMPLFVCGLTGGLFRVPHHLH*PCFLLI Trigger: AATAAGAAGGAAACAAGGCCAGTGCAGATGATGTGG...AACCCTAAATAAACCTCCAGTCAATCCACAGACAAACAATGGCATCAAAATACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071873.4 |
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| CDS-3UTR TCA 90 bp | TGTATTTTGATGCCATTGTTTGTCTGTGGATTGACTGGAGGTTTATTTAGGGTTATAACACACATTTTCTaGAGGGTTGTCTTGACAGAG | + |
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Preference number: 4 (lower is better) Translates to: CILMPLFVCGLTGGLFRVITHIF*RVVLTE Trigger: CTCTGTCAAGACAACCCTTCAGAAAATGTGTGTTAT...AACCCTAAATAAACCTCCAGTCAATCCACAGACAAACAATGGCATCAAAATACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071873.4 |
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| CDS-3UTR TCA 90 bp | TGTATTTTGATGCCATTGTTTGTCTGTGGATTGACTGGAGGTTTATTTAGGGTTTTAACTTCTCAAAGGTaGGATTGTTTTCCACCTTGC | + |
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Preference number: 4 (lower is better) Translates to: CILMPLFVCGLTGGLFRVLTSQR*DCFPPC Trigger: GCAAGGTGGAAAACAATCTCACCTTTGAGAAGTTAA...AACCCTAAATAAACCTCCAGTCAATCCACAGACAAACAATGGCATCAAAATACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000071873.4 |
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| 3UTR CAA 72 bp | TGTGGTTCCAAGAAAAGACTATGTATTTTGATGCCATaGTTTGTCTGTGGATTGACTGGAGGTTTATTTAGG | + |
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Preference number: 4 (lower is better) Translates to: CGSKKRLCILMP*FVCGLTGGLFR Trigger: CCTAAATAAACCTCCAGTCAATCCACAGACAAACAATGGCATCAAAATACATAGTCTTTTCTTGGAACCACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071873.4 |
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| CDS-3UTR CCA 90 bp | GGATTGACTGGAGGTTTATTTAGGGTTACTTTAGAGATCATTGTAGGTTATCTTACTTGTGAACAAACTTaGACAGACACAGGTTTTCCT | + |
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Preference number: 4 (lower is better) Translates to: GLTGGLFRVTLEIIVGYLTCEQT*TDTGFP Trigger: AGGAAAACCTGTGTCTGTCCAAGTTTGTTCACAAGT...AAGATAACCTACAATGATCTCTAAAGTAACCCTAAATAAACCTCCAGTCAATCC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071873.4 |
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| CDS-3UTR GCA 90 bp | TTTGTCTGTGGATTGACTGGAGGTTTATTTAGGGTTACTTTAGAGATCATTGTAAGGGCACTTCCTTGGTaGTATCTTTTTCAAAGAATT | + |
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Preference number: 4 (lower is better) Translates to: FVCGLTGGLFRVTLEIIVRALPW*YLFQRI Trigger: AATTCTTTGAAAAAGATAGCACCAAGGAAGTGCCCT...TACAATGATCTCTAAAGTAACCCTAAATAAACCTCCAGTCAATCCACAGACAAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000071873.4 |
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| CDS-3UTR GCA 90 bp | AATAAGGCAAGTAAGGGCAAGTGTTGTGGTTCCAAGAAAAGACTATGTATTTTGTCCAAGATTCCCAAATaGTGTAATAGGGAATTCATA | + |
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Preference number: 4 (lower is better) Translates to: NKASKGKCCGSKKRLCILSKIPK*CNREFI Trigger: TATGAATTCCCTATTACAGCATTTGGGAATCTTGGA...CAAAATACATAGTCTTTTCTTGGAACCACAACACTTGCCCTTACTTGCCTTATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071873.4 |
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| 3UTR CAA 72 bp | AGACTATGTATTTTGATGCCATTGTTTGTCTGTGGATaGACTGGAGGTTTATTTAGGGTTACTTTAGAGATC | + |
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Preference number: 4 (lower is better) Translates to: RLCILMPLFVCG*TGGLFRVTLEI Trigger: GATCTCTAAAGTAACCCTAAATAAACCTCCAGTCAATCCACAGACAAACAATGGCATCAAAATACATAGTCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071873.4 |
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| 3UTR CAA 72 bp | TATGTAAATATATTGAAAACAGATAGAAAAGGCCATTaGTTAGAGGACTCACTGCACCTGTTCCCAAACTAC | + |
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Preference number: 4 (lower is better) Translates to: YVNILKTDRKGH*LEDSLHLFPNY Trigger: GTAGTTTGGGAACAGGTGCAGTGAGTCCTCTAACAAATGGCCTTTTCTATCTGTTTTCAATATATTTACATA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071873.4 |
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| CDS GCA 90 bp | AGTCTGTTTGGAGACCCACATGTTTATGTGTTGCCTGGACTCCTCTaGAGCTTCGGCAAAAGAGAGCTGCTCAATCTCAGAGTGATAGAA | + |
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Preference number: 5 (lower is better) Translates to: SLFGDPHVYVLPGLL*SFGKRELLNLRVIE Trigger: TTCTATCACTCTGAGATTGAGCAGCTCTCTTTTGCCGAAGCTGCAGAGGAGTCCAGGCAACACATAAACATGTGGGTCTCCAAACAGACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071873.4 |
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| CDS GCA 90 bp | GGAATTTTACCTTTAGTCTGTTTGGAGACCCACATGTTTATGTGTTaGCTGGACTCCTCTGCAGCTTCGGCAAAAGAGAGCTGCTCAATC | + |
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Preference number: 5 (lower is better) Translates to: GILPLVCLETHMFMC*LDSSAASAKESCSI Trigger: GATTGAGCAGCTCTCTTTTGCCGAAGCTGCAGAGGAGTCCAGGCAACACATAAACATGTGGGTCTCCAAACAGACTAAAGGTAAAATTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071873.4 |
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| CDS-3UTR CAA 90 bp | TGGCAAAGGACACAAATTAATATCAGGGTAGGGAGAGCTGAATGTGGGCATCACCCTGAGAAGTCAGCTTaGCTTCCATTGAAGACATCC | + |
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Preference number: 5 (lower is better) Translates to: WQRTQINIRVGRAECGHHPEKSA*LPLKTS Trigger: GGATGTCTTCAATGGAAGCAAAGCTGACTTCTCAGG...GTGATGCCCACATTCAGCTCTCCCTACCCTGATATTAATTTGTGTCCTTTGCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071873.4 |
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| CDS GCA 90 bp | CACGAAATTCAAATCTATGCCCTCATAGGGCATCACCAGCACTTGTaGCTGGATTTCCTTCACATAGGCATGGAAAAATGTGTCTTCCTG | + |
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Preference number: 5 (lower is better) Translates to: HEIQIYALIGHHQHL*LDFLHIGMEKCVFL Trigger: CAGGAAGACACATTTTTCCATGCCTATGTGAAGGAAATCCAGGCACAAGTGCTGGTGATGCCCTATGAGGGCATAGATTTGAATTTCGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000071873.4 |
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| CDS-3UTR CAA 90 bp | ATGTGGGCATCACTAGATCAGAATGAAAAGATGAAAGTTCCTTCATCTTGGAACCTGCAGTGTCTCCCTTaGCACCCAAGAGAACCATGG | + |
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Preference number: 5 (lower is better) Translates to: MWASLDQNEKMKVPSSWNLQCLP*HPREPW Trigger: CCATGGTTCTCTTGGGTGCAAAGGGAGACACTGCAG...GTTCCAAGATGAAGGAACTTTCATCTTTTCATTCTGATCTAGTGATGCCCACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071873.4 |
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| CDS CCA 90 bp | CACATAGGCATGGAAAAATGTGTCTTCCTGCCACATCATCTGCACTaGCCTTGTTTCCTTCTTATTTATCTTAAAGGGCACTTCCTTGGT | + |
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Preference number: 5 (lower is better) Translates to: HIGMEKCVFLPHHLH*PCFLLIYLKGHFLG Trigger: ACCAAGGAAGTGCCCTTTAAGATAAATAAGAAGGAAACAAGGCCAGTGCAGATGATGTGGCAGGAAGACACATTTTTCCATGCCTATGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000071873.4 |
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| CDS-3UTR CAA 90 bp | TGTATTTTGATGCCATTGTTTGTCTGTGGATTGACTGGAGGTTTATTTAGGGTTCCACATGTTTATGTGTaGCCTGGACTCCTCTGCAGC | + |
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Preference number: 5 (lower is better) Translates to: CILMPLFVCGLTGGLFRVPHVYV*PGLLCS Trigger: GCTGCAGAGGAGTCCAGGCAACACATAAACATGTGG...AACCCTAAATAAACCTCCAGTCAATCCACAGACAAACAATGGCATCAAAATACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071873.4 |
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| CDS CCA 90 bp | CTTTTTCAAAGAATTTACACCATGTTCCTTGGAAGTATAAAGCATTaGCGAGAATTAGCCTGGTCTGTGAATCAACTGAGTCTTCTGACA | + |
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Preference number: 5 (lower is better) Translates to: LFQRIYTMFLGSIKH*RELAWSVNQLSLLT Trigger: TGTCAGAAGACTCAGTTGATTCACAGACCAGGCTAATTCTCGCCAATGCTTTATACTTCCAAGGAACATGGTGTAAATTCTTTGAAAAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000071873.4 |
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| CDS CCA 90 bp | ACTTCCTTGGTGCTATCTTTTTCAAAGAATTTACACCATGTTCCTTaGAAGTATAAAGCATTGGCGAGAATTAGCCTGGTCTGTGAATCA | + |
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Preference number: 5 (lower is better) Translates to: TSLVLSFSKNLHHVP*KYKALARISLVCES Trigger: TGATTCACAGACCAGGCTAATTCTCGCCAATGCTTTATACTTCCAAGGAACATGGTGTAAATTCTTTGAAAAAGATAGCACCAAGGAAGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000071873.4 |
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| CDS-3UTR CAA 90 bp | TGTATTTTGATGCCATTGTTTGTCTGTGGATTGACTGGAGGTTTATTTAGGGTTTCATCTGCACTGGCCTaGTTTCCTTCTTATTTATCT | + |
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Preference number: 5 (lower is better) Translates to: CILMPLFVCGLTGGLFRVSSALA*FPSYLS Trigger: AGATAAATAAGAAGGAAACAAGGCCAGTGCAGATGA...AACCCTAAATAAACCTCCAGTCAATCCACAGACAAACAATGGCATCAAAATACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071873.4 |
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| CDS GCA 72 bp | GGAGACCCACATGTTTATGTGTTGCCTGGACTCCTCTaGAGCTTCGGCAAAAGAGAGCTGCTCAATCTCAGA | + |
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Preference number: 6 (lower is better) Translates to: GDPHVYVLPGLL*SFGKRELLNLR Trigger: TCTGAGATTGAGCAGCTCTCTTTTGCCGAAGCTGCAGAGGAGTCCAGGCAACACATAAACATGTGGGTCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071873.4 |
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| CDS CAA 72 bp | ACCTTTAGTCTGTTTGGAGACCCACATGTTTATGTGTaGCCTGGACTCCTCTGCAGCTTCGGCAAAAGAGAG | + |
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Preference number: 6 (lower is better) Translates to: TFSLFGDPHVYV*PGLLCSFGKRE Trigger: CTCTCTTTTGCCGAAGCTGCAGAGGAGTCCAGGCAACACATAAACATGTGGGTCTCCAAACAGACTAAAGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071873.4 |
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| CDS CAA 90 bp | TGGAATTTTACCTTTAGTCTGTTTGGAGACCCACATGTTTATGTGTaGCCTGGACTCCTCTGCAGCTTCGGCAAAAGAGAGCTGCTCAAT | + |
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Preference number: 6 (lower is better) Translates to: WNFTFSLFGDPHVYV*PGLLCSFGKRELLN Trigger: ATTGAGCAGCTCTCTTTTGCCGAAGCTGCAGAGGAGTCCAGGCAACACATAAACATGTGGGTCTCCAAACAGACTAAAGGTAAAATTCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071873.4 |
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| CDS CAA 90 bp | GACCACGAAATTCAAATCTATGCCCTCATAGGGCATCACCAGCACTaGTGCCTGGATTTCCTTCACATAGGCATGGAAAAATGTGTCTTC | + |
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Preference number: 6 (lower is better) Translates to: DHEIQIYALIGHHQH*CLDFLHIGMEKCVF Trigger: GAAGACACATTTTTCCATGCCTATGTGAAGGAAATCCAGGCACAAGTGCTGGTGATGCCCTATGAGGGCATAGATTTGAATTTCGTGGTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000071873.4 |
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| CDS CAA 90 bp | ACTGAGTCTTCTGACAATAAGTCTGGAATTTTACCTTTAGTCTGTTaGGAGACCCACATGTTTATGTGTTGCCTGGACTCCTCTGCAGCT | + |
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Preference number: 6 (lower is better) Translates to: TESSDNKSGILPLVC*ETHMFMCCLDSSAA Trigger: AGCTGCAGAGGAGTCCAGGCAACACATAAACATGTGGGTCTCCAAACAGACTAAAGGTAAAATTCCAGACTTATTGTCAGAAGACTCAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071873.4 |
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| CDS CAA 72 bp | TCTGACAATAAGTCTGGAATTTTACCTTTAGTCTGTTaGGAGACCCACATGTTTATGTGTTGCCTGGACTCC | + |
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Preference number: 6 (lower is better) Translates to: SDNKSGILPLVC*ETHMFMCCLDS Trigger: GGAGTCCAGGCAACACATAAACATGTGGGTCTCCAAACAGACTAAAGGTAAAATTCCAGACTTATTGTCAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071873.4 |
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| CDS CAA 72 bp | AGGTTTTCCTTAGTAGACATTCCTGAGAAGTCAGCTTaGCTTCCATTGAAGACATCCAAGATTCCCAAATGC | + |
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Preference number: 6 (lower is better) Translates to: RFSLVDIPEKSA*LPLKTSKIPKC Trigger: GCATTTGGGAATCTTGGATGTCTTCAATGGAAGCAAAGCTGACTTCTCAGGAATGTCTACTAAGGAAAACCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071873.4 |
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| CDS CCA 72 bp | TTCCTTGGAAGTATAAAGCATTGGCGAGAATTAGCCTaGTCTGTGAATCAACTGAGTCTTCTGACAATAAGT | + |
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Preference number: 6 (lower is better) Translates to: FLGSIKHWRELA*SVNQLSLLTIS Trigger: ACTTATTGTCAGAAGACTCAGTTGATTCACAGACCAGGCTAATTCTCGCCAATGCTTTATACTTCCAAGGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071873.4 |
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| CDS CAA 90 bp | TCTTTTTCAAAGAATTTACACCATGTTCCTTGGAAGTATAAAGCATaGGCGAGAATTAGCCTGGTCTGTGAATCAACTGAGTCTTCTGAC | + |
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Preference number: 6 (lower is better) Translates to: SFSKNLHHVPWKYKA*ARISLVCESTESSD Trigger: GTCAGAAGACTCAGTTGATTCACAGACCAGGCTAATTCTCGCCAATGCTTTATACTTCCAAGGAACATGGTGTAAATTCTTTGAAAAAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000071873.4 |
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| CDS CAA 90 bp | TGCACTGGCCTTGTTTCCTTCTTATTTATCTTAAAGGGCACTTCCTaGGTGCTATCTTTTTCAAAGAATTTACACCATGTTCCTTGGAAG | + |
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Preference number: 6 (lower is better) Translates to: CTGLVSFLFILKGTS*VLSFSKNLHHVPWK Trigger: CTTCCAAGGAACATGGTGTAAATTCTTTGAAAAAGATAGCACCAAGGAAGTGCCCTTTAAGATAAATAAGAAGGAAACAAGGCCAGTGCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000071873.4 |
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