Pregenerated sensors for SERPINB9D (Mus musculus)
Ensembl gene IDs: ENSMUSG00000054266Ensembl transcript IDs: ENSMUST00000067198.3
Found 19 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CACGAAACTCAAATCTATGCCCTCATAGGGCATCACCAGCACTTGTaGCTGGATTTCCTTCACATAGGCATGGTAAAATCTGTCTTCCTG | + |
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Preference number: 5 (lower is better) Translates to: HETQIYALIGHHQHL*LDFLHIGMVKSVFL Trigger: CAGGAAGACAGATTTTACCATGCCTATGTGAAGGAAATCCAGGCACAAGTGCTGGTGATGCCCTATGAGGGCATAGATTTGAGTTTCGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067198.3 |
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| CDS CCA 90 bp | TACAAAGAGCCTGTTGGCCATAGTAAGGCAGTACTTTTGGTTGTTTaGCTTGTTCAGGTTATGGAGAAGCAACTGGAAGCCCTGATGGAC | + |
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Preference number: 5 (lower is better) Translates to: YKEPVGHSKAVLLVV*LVQVMEKQLEALMD Trigger: GTCCATCAGGGCTTCCAGTTGCTTCTCCATAACCTGAACAAGCCAAACAACCAAAAGTACTGCCTTACTATGGCCAACAGGCTCTTTGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067198.3 |
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| CDS CCA 90 bp | CACATAGGCATGGTAAAATCTGTCTTCCTGCCACATCATCTGCACTaGCCTTGTTTCCTTCTTGTTTATCTTAAAGGGCATTTCCTTGGT | + |
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Preference number: 5 (lower is better) Translates to: HIGMVKSVFLPHHLH*PCFLLVYLKGHFLG Trigger: ACCAAGGAAATGCCCTTTAAGATAAACAAGAAGGAAACAAGGCCAGTGCAGATGATGTGGCAGGAAGACAGATTTTACCATGCCTATGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067198.3 |
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| CDS CCA 90 bp | TATACCATGTTCCTTGGAAATATAAGGCATTGGCAAGAATCAGCCTaGTCTGTGAATCAATGGAGTCTTTTGGCAGTAAGTCTGGGATTT | + |
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Preference number: 5 (lower is better) Translates to: YTMFLGNIRHWQESA*SVNQWSLLAVSLGF Trigger: AAATCCCAGACTTACTGCCAAAAGACTCCATTGATTCACAGACCAGGCTGATTCTTGCCAATGCCTTATATTTCCAAGGAACATGGTATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067198.3 |
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| CDS CCA 90 bp | ATTTCCTTGGTGCTATCTTTTTCAAAGAGTTTATACCATGTTCCTTaGAAATATAAGGCATTGGCAAGAATCAGCCTGGTCTGTGAATCA | + |
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Preference number: 5 (lower is better) Translates to: ISLVLSFSKSLYHVP*KYKALARISLVCES Trigger: TGATTCACAGACCAGGCTGATTCTTGCCAATGCCTTATATTTCCAAGGAACATGGTATAAACTCTTTGAAAAAGATAGCACCAAGGAAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000067198.3 |
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| CDS CAA 72 bp | GCCATTAGTCTGTTTGGAGACCCACATGTTTATGTGTaGCCTGGACTCCTCGGCAGCTTCGGCAAAAGAGAG | + |
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Preference number: 6 (lower is better) Translates to: AISLFGDPHVYV*PGLLGSFGKRE Trigger: CTCTCTTTTGCCGAAGCTGCCGAGGAGTCCAGGCAACACATAAACATGTGGGTCTCCAAACAGACTAATGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067198.3 |
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| CDS CAA 90 bp | TGGGATTTTGCCATTAGTCTGTTTGGAGACCCACATGTTTATGTGTaGCCTGGACTCCTCGGCAGCTTCGGCAAAAGAGAGCTGCTCCAT | + |
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Preference number: 6 (lower is better) Translates to: WDFAISLFGDPHVYV*PGLLGSFGKRELLH Trigger: ATGGAGCAGCTCTCTTTTGCCGAAGCTGCCGAGGAGTCCAGGCAACACATAAACATGTGGGTCTCCAAACAGACTAATGGCAAAATCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067198.3 |
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| CDS CAA 90 bp | GACCACGAAACTCAAATCTATGCCCTCATAGGGCATCACCAGCACTaGTGCCTGGATTTCCTTCACATAGGCATGGTAAAATCTGTCTTC | + |
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Preference number: 6 (lower is better) Translates to: DHETQIYALIGHHQH*CLDFLHIGMVKSVF Trigger: GAAGACAGATTTTACCATGCCTATGTGAAGGAAATCCAGGCACAAGTGCTGGTGATGCCCTATGAGGGCATAGATTTGAGTTTCGTGGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067198.3 |
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| CDS CAA 90 bp | TTGGTCCAGGCTGTTAACTTCTCAAAAGTGAGATTGTTTTCCACCTaGCTGATGTCCACACCCTTATCTGGGAGTAGGACCACGAAACTC | + |
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Preference number: 6 (lower is better) Translates to: LVQAVNFSKVRLFST*LMSTPLSGSRTTKL Trigger: GAGTTTCGTGGTCCTACTCCCAGATAAGGGTGTGGACATCAGCAAGGTGGAAAACAATCTCACTTTTGAGAAGTTAACAGCCTGGACCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067198.3 |
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| CDS CCA 72 bp | CCTGTTGGCCATAGTAAGGCAGTACTTTTGGTTGTTTaGCTTGTTCAGGTTATGGAGAAGCAACTGGAAGCC | + |
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Preference number: 6 (lower is better) Translates to: PVGHSKAVLLVV*LVQVMEKQLEA Trigger: GGCTTCCAGTTGCTTCTCCATAACCTGAACAAGCCAAACAACCAAAAGTACTGCCTTACTATGGCCAACAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067198.3 |
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| CDS GCA 72 bp | CAAATCTATGCCCTCATAGGGCATCACCAGCACTTGTaGCTGGATTTCCTTCACATAGGCATGGTAAAATCT | + |
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Preference number: 6 (lower is better) Translates to: QIYALIGHHQHL*LDFLHIGMVKS Trigger: AGATTTTACCATGCCTATGTGAAGGAAATCCAGGCACAAGTGCTGGTGATGCCCTATGAGGGCATAGATTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067198.3 |
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| CDS CAA 72 bp | ACTCAAATCTATGCCCTCATAGGGCATCACCAGCACTaGTGCCTGGATTTCCTTCACATAGGCATGGTAAAA | + |
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Preference number: 6 (lower is better) Translates to: TQIYALIGHHQH*CLDFLHIGMVK Trigger: TTTTACCATGCCTATGTGAAGGAAATCCAGGCACAAGTGCTGGTGATGCCCTATGAGGGCATAGATTTGAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067198.3 |
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| CDS CAA 72 bp | GCTGTTAACTTCTCAAAAGTGAGATTGTTTTCCACCTaGCTGATGTCCACACCCTTATCTGGGAGTAGGACC | + |
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Preference number: 6 (lower is better) Translates to: AVNFSKVRLFST*LMSTPLSGSRT Trigger: GGTCCTACTCCCAGATAAGGGTGTGGACATCAGCAAGGTGGAAAACAATCTCACTTTTGAGAAGTTAACAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067198.3 |
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| CDS CAA 90 bp | ATAAAGTCTGGTTTGGTCCAGGCTGTTAACTTCTCAAAAGTGAGATaGTTTTCCACCTTGCTGATGTCCACACCCTTATCTGGGAGTAGG | + |
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Preference number: 6 (lower is better) Translates to: IKSGLVQAVNFSKVR*FSTLLMSTPLSGSR Trigger: CCTACTCCCAGATAAGGGTGTGGACATCAGCAAGGTGGAAAACAATCTCACTTTTGAGAAGTTAACAGCCTGGACCAAACCAGACTTTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067198.3 |
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| CDS CAA 72 bp | GGTTTGGTCCAGGCTGTTAACTTCTCAAAAGTGAGATaGTTTTCCACCTTGCTGATGTCCACACCCTTATCT | + |
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Preference number: 6 (lower is better) Translates to: GLVQAVNFSKVR*FSTLLMSTPLS Trigger: AGATAAGGGTGTGGACATCAGCAAGGTGGAAAACAATCTCACTTTTGAGAAGTTAACAGCCTGGACCAAACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067198.3 |
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| CDS CAA 90 bp | GACAGACACAGGTTTTCCTTAGTAGACATTCCTGATAAGTCAGCCTaGCTTCCATCAAAGACATCCAAAATTCCCAAATGCTGTAACAGG | + |
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Preference number: 6 (lower is better) Translates to: DRHRFSLVDIPDKSA*LPSKTSKIPKCCNR Trigger: CCTGTTACAGCATTTGGGAATTTTGGATGTCTTTGATGGAAGCAAGGCTGACTTATCAGGAATGTCTACTAAGGAAAACCTGTGTCTGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000067198.3 |
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| CDS CCA 72 bp | TTCCTTGGAAATATAAGGCATTGGCAAGAATCAGCCTaGTCTGTGAATCAATGGAGTCTTTTGGCAGTAAGT | + |
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Preference number: 6 (lower is better) Translates to: FLGNIRHWQESA*SVNQWSLLAVS Trigger: ACTTACTGCCAAAAGACTCCATTGATTCACAGACCAGGCTGATTCTTGCCAATGCCTTATATTTCCAAGGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067198.3 |
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| CDS CCA 72 bp | ATGGTAAAATCTGTCTTCCTGCCACATCATCTGCACTaGCCTTGTTTCCTTCTTGTTTATCTTAAAGGGCAT | + |
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Preference number: 6 (lower is better) Translates to: MVKSVFLPHHLH*PCFLLVYLKGH Trigger: ATGCCCTTTAAGATAAACAAGAAGGAAACAAGGCCAGTGCAGATGATGTGGCAGGAAGACAGATTTTACCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067198.3 |
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| CDS CAA 90 bp | TGCACTGGCCTTGTTTCCTTCTTGTTTATCTTAAAGGGCATTTCCTaGGTGCTATCTTTTTCAAAGAGTTTATACCATGTTCCTTGGAAA | + |
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Preference number: 6 (lower is better) Translates to: CTGLVSFLFILKGIS*VLSFSKSLYHVPWK Trigger: TTTCCAAGGAACATGGTATAAACTCTTTGAAAAAGATAGCACCAAGGAAATGCCCTTTAAGATAAACAAGAAGGAAACAAGGCCAGTGCA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000067198.3 |
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