Pregenerated sensors for SERPINB9B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021403Ensembl transcript IDs: ENSMUST00000006392.3
Found 90 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCCTGGGACATGACTCTGGGGTTGGTGAAGCACAGTCTGAGGCACTaGCACATGGAGCTGGCTGAGGGTACCTGGACCTGTAACAAGGCT | + |
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Preference number: 1 (lower is better) Translates to: PWDMTLGLVKHSLRH*HMELAEGTWTCNKA Trigger: AGCCTTGTTACAGGTCCAGGTACCCTCAGCCAGCTCCATGTGTCAGTGCCTCAGACTGTGCTTCACCAACCCCAGAGTCATGTCCCAGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006392.3 |
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| 3UTR TCA 90 bp | TGGGAAGTTGACCACACTTACCACACTCTGTTGCTGGGCAGGTGTTaGGTGGTAGGGACAGCCCTGGGACATGACTCTGGGGTTGGTGAA | + |
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Preference number: 1 (lower is better) Translates to: WEVDHTYHTLLLGRC*VVGTALGHDSGVGE Trigger: TTCACCAACCCCAGAGTCATGTCCCAGGGCTGTCCCTACCACTCAACACCTGCCCAGCAACAGAGTGTGGTAAGTGTGGTCAACTTCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006392.3 |
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| 3UTR TCA 90 bp | TCTGCCATAGGATACAACTGCTCAGGGAGGCAAGACGTGGGAAGTTaGCCACACTTACCACACTCTGTTGCTGGGCAGGTGTTGAGTGGT | + |
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Preference number: 1 (lower is better) Translates to: SAIGYNCSGRQDVGS*PHLPHSVAGQVLSG Trigger: ACCACTCAACACCTGCCCAGCAACAGAGTGTGGTAAGTGTGGTCAACTTCCCACGTCTTGCCTCCCTGAGCAGTTGTATCCTATGGCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006392.3 |
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| 3UTR-3UTR TCA 90 bp | ATACAACTGCTCAGGGAGGCAAGACGTGGGAAGTTGACCACACTTACCACACTCTTGCTGGGCAGGTGTTaGGTGGTAGGGACAGCCCTG | + |
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Preference number: 2 (lower is better) Translates to: IQLLREARRGKLTTLTTLLLGRC*VVGTAL Trigger: CAGGGCTGTCCCTACCACTCAACACCTGCCCAGCAA...GAGTGTGGTAAGTGTGGTCAACTTCCCACGTCTTGCCTCCCTGAGCAGTTGTAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006392.3 |
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| 3UTR CAA 90 bp | TGGTCCCTCAGCAATTGTCCTTGGCTTGACAGGGACAGGCTTTGTTaGGGCTTGATGTTGACCATGGCTGGGAGCACAGAATGGCCATGT | + |
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Preference number: 2 (lower is better) Translates to: WSLSNCPWLDRDRLC*GLMLTMAGSTEWPC Trigger: ACATGGCCATTCTGTGCTCCCAGCCATGGTCAACATCAAGCCCAAACAAAGCCTGTCCCTGTCAAGCCAAGGACAATTGCTGAGGGACCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006392.3 |
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| 3UTR-3UTR GCA 90 bp | ATACAACTGCTCAGGGAGGCAAGACGTGGGAAGTTGACCACACTTACCACACTCCAAACGCCTTCTCCATaGCTCTCCACTGCAGATCCC | + |
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Preference number: 2 (lower is better) Translates to: IQLLREARRGKLTTLTTLQTPSP*LSTADP Trigger: GGGATCTGCAGTGGAGAGGCATGGAGAAGGCGTTTG...GAGTGTGGTAAGTGTGGTCAACTTCCCACGTCTTGCCTCCCTGAGCAGTTGTAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006392.3 |
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| 3UTR-3UTR GCA 90 bp | GTGAGAAGTGCCTGGATCCCAGGAGCAGGCAAAGCTCCTACTGCCCCTTCAGGGTATTCCTTGGTCCTCTaGAAGAGTAACAAGACTTGT | + |
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Preference number: 2 (lower is better) Translates to: VRSAWIPGAGKAPTAPSGYSLVL*KSNKTC Trigger: ACAAGTCTTGTTACTCTTGCAGAGGACCAAGGAATA...CCCTGAAGGGGCAGTAGGAGCTTTGCCTGCTCCTGGGATCCAGGCACTTCTCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006392.3 |
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| 3UTR-3UTR TCA 90 bp | ATACAACTGCTCAGGGAGGCAAGACGTGGGAAGTTGACCACACTTACCACACTCAAACCATGGAAGAGCTaGGATCAGAGTGGTGTCCCA | + |
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Preference number: 2 (lower is better) Translates to: IQLLREARRGKLTTLTTLKPWKS*DQSGVP Trigger: TGGGACACCACTCTGATCTCAGCTCTTCCATGGTTT...GAGTGTGGTAAGTGTGGTCAACTTCCCACGTCTTGCCTCCCTGAGCAGTTGTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006392.3 |
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| 3UTR-3UTR CCA 90 bp | ATACAACTGCTCAGGGAGGCAAGACGTGGGAAGTTGACCACACTTACCACACTCTTGTTCTCAGGCTCTTaGACATCCAGGCATCACTGG | + |
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Preference number: 2 (lower is better) Translates to: IQLLREARRGKLTTLTTLLFSGS*TSRHHW Trigger: CCAGTGATGCCTGGATGTCCAAGAGCCTGAGAACAA...GAGTGTGGTAAGTGTGGTCAACTTCCCACGTCTTGCCTCCCTGAGCAGTTGTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006392.3 |
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| 3UTR-3UTR TCA 90 bp | GAAGGTGTCTCTATAGACAAACGCCTTCTCCATGCCTCTCCACTGCAGATCCCAATCATAAGATCAGGCTaGCAGGGAGAAAGTGCCTTC | + |
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Preference number: 2 (lower is better) Translates to: EGVSIDKRLLHASPLQIPIIRSG*QGESAF Trigger: GAAGGCACTTTCTCCCTGTCAGCCTGATCTTATGAT...TGGGATCTGCAGTGGAGAGGCATGGAGAAGGCGTTTGTCTATAGAGACACCTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006392.3 |
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| 3UTR-3UTR CCA 90 bp | TCTATAGACAAACGCCTTCTCCATGCCTCTCCACTGCAGATCCCAATAAAAAGAGAGTGGTGGAGATGCTaGAGTGTGAACTCACCCCAC | + |
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Preference number: 2 (lower is better) Translates to: SIDKRLLHASPLQIPIKREWWRC*SVNSPH Trigger: GTGGGGTGAGTTCACACTCCAGCATCTCCACCACTC...TCTTTTTATTGGGATCTGCAGTGGAGAGGCATGGAGAAGGCGTTTGTCTATAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006392.3 |
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| 3UTR-3UTR GCA 90 bp | GCTACAAATCTATTGGGAGCTGCAGCTAGTGAGAAGTGCCTGGATCCCAGGAGCTCACTGTTTGATGGTTaGAGTGTGTTTGAAAGGAGA | + |
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Preference number: 2 (lower is better) Translates to: ATNLLGAAASEKCLDPRSSLFDG*SVFERR Trigger: TCTCCTTTCAAACACACTGCAACCATCAAACAGTGA...GCTCCTGGGATCCAGGCACTTCTCACTAGCTGCAGCTCCCAATAGATTTGTAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006392.3 |
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| 3UTR-3UTR CCA 90 bp | GAAGGTGTCTCTATAGACAAACGCCTTCTCCATGCCTCTCCACTGCAGATCCCACTTCATCTTAGAACATaGATTCCCTCTGTTTGCCCA | + |
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Preference number: 2 (lower is better) Translates to: EGVSIDKRLLHASPLQIPLHLRT*IPSVCP Trigger: TGGGCAAACAGAGGGAATCCATGTTCTAAGATGAAG...TGGGATCTGCAGTGGAGAGGCATGGAGAAGGCGTTTGTCTATAGAGACACCTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006392.3 |
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| 3UTR-3UTR TCA 90 bp | TCTATAGACAAACGCCTTCTCCATGCCTCTCCACTGCAGATCCCAATAAAAAGAAATGGAGATCTGTCTTaGGCCTACGTGACCACAGGT | + |
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Preference number: 2 (lower is better) Translates to: SIDKRLLHASPLQIPIKRNGDLS*AYVTTG Trigger: ACCTGTGGTCACGTAGGCTCAAGACAGATCTCCATT...TCTTTTTATTGGGATCTGCAGTGGAGAGGCATGGAGAAGGCGTTTGTCTATAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006392.3 |
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| 3UTR-3UTR CCA 90 bp | TTATTGTTCTCAGGCTCTTGGACATCCAGGCATCACTGGAAACCATGGAAGAGCAGAGGGTATATGGCATaGTTAGACATAACTGTGCAG | + |
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Preference number: 2 (lower is better) Translates to: LLFSGSWTSRHHWKPWKSRGYMA*LDITVQ Trigger: CTGCACAGTTATGTCTAACCATGCCATATACCCTCT...GCTCTTCCATGGTTTCCAGTGATGCCTGGATGTCCAAGAGCCTGAGAACAATAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006392.3 |
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| 3UTR-3UTR CCA 90 bp | TTATTGTTCTCAGGCTCTTGGACATCCAGGCATCACTGGAAACCATGGAAGAGCAGAATGGCCATGTACTaGACATTAGAAGGTGTCTCT | + |
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Preference number: 2 (lower is better) Translates to: LLFSGSWTSRHHWKPWKSRMAMY*TLEGVS Trigger: AGAGACACCTTCTAATGTCCAGTACATGGCCATTCT...GCTCTTCCATGGTTTCCAGTGATGCCTGGATGTCCAAGAGCCTGAGAACAATAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006392.3 |
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| 3UTR-3UTR CCA 90 bp | ATGAAAGCCTTGGAGGAAAACATAGCGCCAGTTATTTCTATACTTGACTTTAGTCTGGCTGAGGGTACCTaGACCTGTAACAAGGCTGGG | + |
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Preference number: 2 (lower is better) Translates to: MKALEENIAPVISILDFSLAEGT*TCNKAG Trigger: CCCAGCCTTGTTACAGGTCCAGGTACCCTCAGCCAG...ACTAAAGTCAAGTATAGAAATAACTGGCGCTATGTTTTCCTCCAAGGCTTTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006392.3 |
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| 3UTR-3UTR CCA 90 bp | ATGAAAGCCTTGGAGGAAAACATAGCGCCAGTTATTTCTATACTTGACTTTAGTCTAGTGAGAAGTGCCTaGATCCCAGGAGCAGGCAAA | + |
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Preference number: 2 (lower is better) Translates to: MKALEENIAPVISILDFSLVRSA*IPGAGK Trigger: TTTGCCTGCTCCTGGGATCCAGGCACTTCTCACTAG...ACTAAAGTCAAGTATAGAAATAACTGGCGCTATGTTTTCCTCCAAGGCTTTCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006392.3 |
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| 3UTR-3UTR CCA 90 bp | ATGAAAGCCTTGGAGGAAAACATAGCGCCAGTTATTTCTATACTTGACTTTAGTGAGCAGTCAGGTGAGTaGTGGGAAATATTCCTTGGT | + |
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Preference number: 2 (lower is better) Translates to: MKALEENIAPVISILDFSEQSGE*WEIFLG Trigger: ACCAAGGAATATTTCCCACCACTCACCTGACTGCTC...ACTAAAGTCAAGTATAGAAATAACTGGCGCTATGTTTTCCTCCAAGGCTTTCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006392.3 |
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| 3UTR-3UTR CCA 90 bp | TCTATAGACAAACGCCTTCTCCATGCCTCTCCACTGCAGATCCCAATAAAAAGAAGAAGAAAAGTTTATTaGATAAACCCTCTAGGCCAT | + |
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Preference number: 2 (lower is better) Translates to: SIDKRLLHASPLQIPIKRRRKVY*INPLGH Trigger: ATGGCCTAGAGGGTTTATCCAATAAACTTTTCTTCT...TCTTTTTATTGGGATCTGCAGTGGAGAGGCATGGAGAAGGCGTTTGTCTATAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006392.3 |
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| 3UTR TCA 72 bp | GACCACACTTACCACACTCTGTTGCTGGGCAGGTGTTaGGTGGTAGGGACAGCCCTGGGACATGACTCTGGG | + |
|
Preference number: 3 (lower is better) Translates to: DHTYHTLLLGRC*VVGTALGHDSG Trigger: CCCAGAGTCATGTCCCAGGGCTGTCCCTACCACTCAACACCTGCCCAGCAACAGAGTGTGGTAAGTGTGGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006392.3 |
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| 3UTR TCA 72 bp | ATGACTCTGGGGTTGGTGAAGCACAGTCTGAGGCACTaGCACATGGAGCTGGCTGAGGGTACCTGGACCTGT | + |
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Preference number: 3 (lower is better) Translates to: MTLGLVKHSLRH*HMELAEGTWTC Trigger: ACAGGTCCAGGTACCCTCAGCCAGCTCCATGTGTCAGTGCCTCAGACTGTGCTTCACCAACCCCAGAGTCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006392.3 |
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| 3UTR TCA 72 bp | GGATACAACTGCTCAGGGAGGCAAGACGTGGGAAGTTaGCCACACTTACCACACTCTGTTGCTGGGCAGGTG | + |
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Preference number: 3 (lower is better) Translates to: GYNCSGRQDVGS*PHLPHSVAGQV Trigger: CACCTGCCCAGCAACAGAGTGTGGTAAGTGTGGTCAACTTCCCACGTCTTGCCTCCCTGAGCAGTTGTATCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006392.3 |
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| 3UTR GCA 72 bp | AAGTGCCTGGATCCCAGGAGCAGGCAAAGCTCCTACTaGCCCTTCAGGGTCTCAGAAGTTTCTAGACTTAGC | + |
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Preference number: 3 (lower is better) Translates to: KCLDPRSRQSSY*PFRVSEVSRLS Trigger: GCTAAGTCTAGAAACTTCTGAGACCCTGAAGGGGCAGTAGGAGCTTTGCCTGCTCCTGGGATCCAGGCACTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006392.3 |
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| 3UTR CCA 72 bp | AAGGGAGGTTGCAGCTGGTCCCTCAGCAATTGTCCTTaGCTTGACAGGGACAGGCTTTGTTTGGGCTTGATG | + |
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Preference number: 3 (lower is better) Translates to: KGGCSWSLSNCP*LDRDRLCLGLM Trigger: CATCAAGCCCAAACAAAGCCTGTCCCTGTCAAGCCAAGGACAATTGCTGAGGGACCAGCTGCAACCTCCCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006392.3 |
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| 3UTR TCA 72 bp | AGGTTGCAGCTGGTCCCTCAGCAATTGTCCTTGGCTTaGCAGGGACAGGCTTTGTTTGGGCTTGATGTTGAC | + |
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Preference number: 3 (lower is better) Translates to: RLQLVPQQLSLA*QGQALFGLDVD Trigger: GTCAACATCAAGCCCAAACAAAGCCTGTCCCTGTCAAGCCAAGGACAATTGCTGAGGGACCAGCTGCAACCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006392.3 |
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| 3UTR TCA 72 bp | TGGACATCCAGGCATCACTGGAAACCATGGAAGAGCTaGGATCAGAGTGGTGTCCCATGGGCTGAATCTAGC | + |
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Preference number: 3 (lower is better) Translates to: WTSRHHWKPWKS*DQSGVPWAESS Trigger: GCTAGATTCAGCCCATGGGACACCACTCTGATCTCAGCTCTTCCATGGTTTCCAGTGATGCCTGGATGTCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006392.3 |
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| 3UTR CCA 72 bp | AGGCTGACAGGGAGAAAGTGCCTTCATCTTAGAACATaGATTCCCTCTGTTTGCCCATTCTCACGGAGCTGT | + |
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Preference number: 3 (lower is better) Translates to: RLTGRKCLHLRT*IPSVCPFSRSC Trigger: ACAGCTCCGTGAGAATGGGCAAACAGAGGGAATCCATGTTCTAAGATGAAGGCACTTTCTCCCTGTCAGCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006392.3 |
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| 3UTR TCA 72 bp | TCTACCTGTGGAGGCGCTTGGGACATTGCCTTTATATaGCTGATGGCTACAAATCTATTGGGAGCTGCAGCT | + |
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Preference number: 3 (lower is better) Translates to: STCGGAWDIAFI*LMATNLLGAAA Trigger: AGCTGCAGCTCCCAATAGATTTGTAGCCATCAGTCATATAAAGGCAATGTCCCAAGCGCCTCCACAGGTAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006392.3 |
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| 3UTR CCA 72 bp | TATGGGTATCAGTGGCATAGCAGAGGGTATATGGCATaGTTAGACATAACTGTGCAGAGGGCACAGGTGCAT | + |
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Preference number: 3 (lower is better) Translates to: YGYQWHSRGYMA*LDITVQRAQVH Trigger: ATGCACCTGTGCCCTCTGCACAGTTATGTCTAACCATGCCATATACCCTCTGCTATGCCACTGATACCCATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006392.3 |
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| 3UTR TCA 72 bp | CAGGGAAAGGTGAAAGCAGGCATCATAAGATCAGGCTaGCAGGGAGAAAGTGCCTTCATCTTAGAACATGGA | + |
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Preference number: 3 (lower is better) Translates to: QGKVKAGIIRSG*QGESAFILEHG Trigger: TCCATGTTCTAAGATGAAGGCACTTTCTCCCTGTCAGCCTGATCTTATGATGCCTGCTTTCACCTTTCCCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006392.3 |
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| 3UTR CCA 72 bp | GATAAACCCTCTAGGCCATTAGGTACCTCACTAAAATaGAGATCTGTCTTGAGCCTACGTGACCACAGGTCA | + |
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Preference number: 3 (lower is better) Translates to: DKPSRPLGTSLK*RSVLSLRDHRS Trigger: TGACCTGTGGTCACGTAGGCTCAAGACAGATCTCCATTTTAGTGAGGTACCTAATGGCCTAGAGGGTTTATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006392.3 |
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| 3UTR-3UTR CAA 90 bp | TTATTGTTCTCAGGCTCTTGGACATCCAGGCATCACTGGAAACCATGGAAGAGCATGGTTGCAGTGTGTTaGAAAGGAGATGAAAATAAG | + |
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Preference number: 3 (lower is better) Translates to: LLFSGSWTSRHHWKPWKSMVAVC*KGDENK Trigger: CTTATTTTCATCTCCTTTCAAACACACTGCAACCAT...GCTCTTCCATGGTTTCCAGTGATGCCTGGATGTCCAAGAGCCTGAGAACAATAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006392.3 |
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| 3UTR-3UTR CAA 90 bp | ATGAAAGCCTTGGAGGAAAACATAGCGCCAGTTATTTCTATACTTGACTTTAGTAGGCTTTGTTTGGGCTaGATGTTGACCATGGCTGGG | + |
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Preference number: 3 (lower is better) Translates to: MKALEENIAPVISILDFSRLCLG*MLTMAG Trigger: CCCAGCCATGGTCAACATCAAGCCCAAACAAAGCCT...ACTAAAGTCAAGTATAGAAATAACTGGCGCTATGTTTTCCTCCAAGGCTTTCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006392.3 |
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| 3UTR-3UTR CAA 90 bp | ATGAAAGCCTTGGAGGAAAACATAGCGCCAGTTATTTCTATACTTGACTTTAGTGAGAAGAAAAGTTTATaGGATAAACCCTCTAGGCCA | + |
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Preference number: 3 (lower is better) Translates to: MKALEENIAPVISILDFSEKKSL*DKPSRP Trigger: TGGCCTAGAGGGTTTATCCAATAAACTTTTCTTCTC...ACTAAAGTCAAGTATAGAAATAACTGGCGCTATGTTTTCCTCCAAGGCTTTCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006392.3 |
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| CDS-3UTR GCA 90 bp | ATACAACTGCTCAGGGAGGCAAGACGTGGGAAGTTGACCACACTTACCACACTCTGCGGTCTGCTCCTTTaGACCCAGGAGGACCATAGC | + |
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Preference number: 4 (lower is better) Translates to: IQLLREARRGKLTTLTTLCGLLL*TQEDHS Trigger: GCTATGGTCCTCCTGGGTGCAAAGGAGCAGACCGCA...GAGTGTGGTAAGTGTGGTCAACTTCCCACGTCTTGCCTCCCTGAGCAGTTGTAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006392.3 |
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| CDS-3UTR CCA 90 bp | GTGAGAAGTGCCTGGATCCCAGGAGCAGGCAAAGCTCCTACTGCCCCTTCAGGGGATTCTTTGCAAAACTaGCAAGCCCACATCCCTTTG | + |
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Preference number: 4 (lower is better) Translates to: VRSAWIPGAGKAPTAPSGDSLQN*QAHIPL Trigger: CAAAGGGATGTGGGCTTGCCAGTTTTGCAAAGAATC...CCCTGAAGGGGCAGTAGGAGCTTTGCCTGCTCCTGGGATCCAGGCACTTCTCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000006392.3 |
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| 3UTR CAA 72 bp | AGGATACAACTGCTCAGGGAGGCAAGACGTGGGAAGTaGACCACACTTACCACACTCTGTTGCTGGGCAGGT | + |
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Preference number: 4 (lower is better) Translates to: RIQLLREARRGK*TTLTTLCCWAG Trigger: ACCTGCCCAGCAACAGAGTGTGGTAAGTGTGGTCAACTTCCCACGTCTTGCCTCCCTGAGCAGTTGTATCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006392.3 |
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| 3UTR CAA 72 bp | TGGCTTGACAGGGACAGGCTTTGTTTGGGCTTGATGTaGACCATGGCTGGGAGCACAGAATGGCCATGTACT | + |
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Preference number: 4 (lower is better) Translates to: WLDRDRLCLGLM*TMAGSTEWPCT Trigger: AGTACATGGCCATTCTGTGCTCCCAGCCATGGTCAACATCAAGCCCAAACAAAGCCTGTCCCTGTCAAGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006392.3 |
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| CDS-3UTR GCA 90 bp | TTATTGTTCTCAGGCTCTTGGACATCCAGGCATCACTGGAAACCATGGAAGAGCATCTGGACTGCGGTCTaGTCCTTTGCACCCAGGAGG | + |
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Preference number: 4 (lower is better) Translates to: LLFSGSWTSRHHWKPWKSIWTAV*SFAPRR Trigger: CCTCCTGGGTGCAAAGGAGCAGACCGCAGTCCAGAT...GCTCTTCCATGGTTTCCAGTGATGCCTGGATGTCCAAGAGCCTGAGAACAATAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006392.3 |
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| 3UTR CAA 72 bp | AGCAATTGTCCTTGGCTTGACAGGGACAGGCTTTGTTaGGGCTTGATGTTGACCATGGCTGGGAGCACAGAA | + |
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Preference number: 4 (lower is better) Translates to: SNCPWLDRDRLC*GLMLTMAGSTE Trigger: TTCTGTGCTCCCAGCCATGGTCAACATCAAGCCCAAACAAAGCCTGTCCCTGTCAAGCCAAGGACAATTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006392.3 |
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| CDS-3UTR TCA 90 bp | TTATTGTTCTCAGGCTCTTGGACATCCAGGCATCACTGGAAACCATGGAAGAGCGCTTGTTCAGCTTCCTaGGAAGCTTCAGGAATCCCT | + |
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Preference number: 4 (lower is better) Translates to: LLFSGSWTSRHHWKPWKSACSAS*EASGIP Trigger: AGGGATTCCTGAAGCTTCTCAGGAAGCTGAACAAGC...GCTCTTCCATGGTTTCCAGTGATGCCTGGATGTCCAAGAGCCTGAGAACAATAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006392.3 |
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| CDS-3UTR GCA 90 bp | ATACAACTGCTCAGGGAGGCAAGACGTGGGAAGTTGACCACACTTACCACACTCTTGCCTGGACTCCACTaGAGCTTTGAAAAAGTTGAC | + |
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Preference number: 4 (lower is better) Translates to: IQLLREARRGKLTTLTTLLPGLH*SFEKVD Trigger: GTCAACTTTTTCAAAGCTGCAGTGGAGTCCAGGCAA...GAGTGTGGTAAGTGTGGTCAACTTCCCACGTCTTGCCTCCCTGAGCAGTTGTAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006392.3 |
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| CDS-3UTR GCA 90 bp | TTATTGTTCTCAGGCTCTTGGACATCCAGGCATCACTGGAAACCATGGAAGAGCCACGTGTTTATGCATTaGCTGGACTCCACTGCAGCT | + |
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Preference number: 4 (lower is better) Translates to: LLFSGSWTSRHHWKPWKSHVFMH*LDSTAA Trigger: AGCTGCAGTGGAGTCCAGGCAATGCATAAACACGTG...GCTCTTCCATGGTTTCCAGTGATGCCTGGATGTCCAAGAGCCTGAGAACAATAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006392.3 |
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| CDS-3UTR TCA 90 bp | GCTACAAATCTATTGGGAGCTGCAGCTAGTGAGAAGTGCCTGGATCCCAGGAGCTCCACTACACTCTTGTaGATAAACTTGGACAGACAT | + |
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Preference number: 4 (lower is better) Translates to: ATNLLGAAASEKCLDPRSSTTLL*INLDRH Trigger: ATGTCTGTCCAAGTTTATTCACAAGAGTGTAGTGGA...GCTCCTGGGATCCAGGCACTTCTCACTAGCTGCAGCTCCCAATAGATTTGTAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006392.3 |
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| CDS-3UTR GCA 90 bp | TCTATAGACAAACGCCTTCTCCATGCCTCTCCACTGCAGATCCCAATAAAAAGACCCTGGTGGATTCTTTaGAAAACTGGCAAGCCCACA | + |
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Preference number: 4 (lower is better) Translates to: SIDKRLLHASPLQIPIKRPWWIL*KTGKPT Trigger: TGTGGGCTTGCCAGTTTTGCAAAGAATCCACCAGGG...TCTTTTTATTGGGATCTGCAGTGGAGAGGCATGGAGAAGGCGTTTGTCTATAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006392.3 |
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| CDS-3UTR GCA 90 bp | GTGAGTGGTGGGAAATATTCCTTGGTCCTCTGCAAGAGTAACAAGACTTGTACGATGGAGATGAGAACCTaGCACAGAACAGGATGCTGT | + |
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Preference number: 4 (lower is better) Translates to: VSGGKYSLVLCKSNKTCTMEMRT*HRTGCC Trigger: ACAGCATCCTGTTCTGTGGCAGGTTCTCATCTCCAT...CGTACAAGTCTTGTTACTCTTGCAGAGGACCAAGGAATATTTCCCACCACTCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006392.3 |
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| CDS-3UTR TCA 90 bp | ATACAACTGCTCAGGGAGGCAAGACGTGGGAAGTTGACCACACTTACCACACTCTTGGAAGGGTTGCTTTaGCATAACATCTTCAATAGA | + |
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Preference number: 4 (lower is better) Translates to: IQLLREARRGKLTTLTTLLEGLL*HNIFNR Trigger: TCTATTGAAGATGTTATGTCAAAGCAACCCTTCCAA...GAGTGTGGTAAGTGTGGTCAACTTCCCACGTCTTGCCTCCCTGAGCAGTTGTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006392.3 |
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| CDS-3UTR GCA 90 bp | TCAGGGTCTCAGAAGTTTCTAGACTTAGCTCAACCAGGAAGCAGAATACCTTTCGATGGATGGCAAAGGTaGCATTTGCTTCAGACAGAG | + |
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Preference number: 4 (lower is better) Translates to: SGSQKFLDLAQPGSRIPFDGWQR*HLLQTE Trigger: CTCTGTCTGAAGCAAATGGCACCTTTGCCATCCATC...GAAAGGTATTCTGCTTCCTGGTTGAGCTAAGTCTAGAAACTTCTGAGACCCTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006392.3 |
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| CDS-3UTR GCA 90 bp | TTATTGTTCTCAGGCTCTTGGACATCCAGGCATCACTGGAAACCATGGAAGAGCACAACTCTGGGATTTTaGCTTCAGTCTGTTTGGAGA | + |
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Preference number: 4 (lower is better) Translates to: LLFSGSWTSRHHWKPWKSTTLGF*LQSVWR Trigger: TCTCCAAACAGACTGAAGGCAAAATCCCAGAGTTGT...GCTCTTCCATGGTTTCCAGTGATGCCTGGATGTCCAAGAGCCTGAGAACAATAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006392.3 |
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| CDS-3UTR GCA 90 bp | GTGAGTGGTGGGAAATATTCCTTGGTCCTCTGCAAGAGTAACAAGACTTGTACGTCAAGCTCAGCTCCATaGCTTCATAGGGCATTATCA | + |
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Preference number: 4 (lower is better) Translates to: VSGGKYSLVLCKSNKTCTSSSAP*LHRALS Trigger: TGATAATGCCCTATGAAGGCATGGAGCTGAGCTTGA...CGTACAAGTCTTGTTACTCTTGCAGAGGACCAAGGAATATTTCCCACCACTCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006392.3 |
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| CDS-3UTR CCA 90 bp | GAAAGCAGGCATCATAAGATCAGGCTGACAGGGAGAAAGTGCCTTCATCTTAGAGGAGTATTTTCTGTCTaGCTTGTTCAGCTTCCTGAG | + |
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Preference number: 4 (lower is better) Translates to: ESRHHKIRLTGRKCLHLRGVFSV*LVQLPE Trigger: CTCAGGAAGCTGAACAAGCCAGACAGAAAATACTCC...TCTAAGATGAAGGCACTTTCTCCCTGTCAGCCTGATCTTATGATGCCTGCTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006392.3 |
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| CDS-3UTR CCA 90 bp | GAAGGTGTCTCTATAGACAAACGCCTTCTCCATGCCTCTCCACTGCAGATCCCACTTGTTTATGTAAAATaGCATTTCCCTGGTGGATTC | + |
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Preference number: 4 (lower is better) Translates to: EGVSIDKRLLHASPLQIPLVYVK*HFPGGF Trigger: GAATCCACCAGGGAAATGCCATTTTACATAAACAAG...TGGGATCTGCAGTGGAGAGGCATGGAGAAGGCGTTTGTCTATAGAGACACCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006392.3 |
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| CDS-3UTR TCA 90 bp | TCTATAGACAAACGCCTTCTCCATGCCTCTCCACTGCAGATCCCAATAAAAAGAGGTCTGGAAATTAACTaGGTCATCTGCCAACAACTC | + |
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Preference number: 4 (lower is better) Translates to: SIDKRLLHASPLQIPIKRGLEIN*VICQQL Trigger: GAGTTGTTGGCAGATGACTCAGTTAATTTCCAGACC...TCTTTTTATTGGGATCTGCAGTGGAGAGGCATGGAGAAGGCGTTTGTCTATAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006392.3 |
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| CDS-3UTR CCA 90 bp | TCTATAGACAAACGCCTTCTCCATGCCTCTCCACTGCAGATCCCAATAAAAAGATATCAGCAATCTAGCTaGCAACTCATCCACAAAGGC | + |
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Preference number: 4 (lower is better) Translates to: SIDKRLLHASPLQIPIKRYQQSS*QLIHKG Trigger: GCCTTTGTGGATGAGTTGCCAGCTAGATTGCTGATA...TCTTTTTATTGGGATCTGCAGTGGAGAGGCATGGAGAAGGCGTTTGTCTATAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006392.3 |
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| CDS-3UTR CCA 90 bp | GAAAGCAGGCATCATAAGATCAGGCTGACAGGGAGAAAGTGCCTTCATCTTAGATCTTCAATAGATGGATaGCAAAGGTGCCATTTGCTT | + |
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Preference number: 4 (lower is better) Translates to: ESRHHKIRLTGRKCLHLRSSIDG*QRCHLL Trigger: AAGCAAATGGCACCTTTGCCATCCATCTATTGAAGA...TCTAAGATGAAGGCACTTTCTCCCTGTCAGCCTGATCTTATGATGCCTGCTTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006392.3 |
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| CDS-3UTR CCA 90 bp | GTCCTCTGCAAGAGTAACAAGACTTGTACGGTGAAATCACTTCTAACTGGTTCTATCTGCCAACAACTCTaGGATTTTGCCTTCAGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: VLCKSNKTCTVKSLLTGSICQQL*DFAFSL Trigger: CAGACTGAAGGCAAAATCCCAGAGTTGTTGGCAGAT...AGAACCAGTTAGAAGTGATTTCACCGTACAAGTCTTGTTACTCTTGCAGAGGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006392.3 |
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| CDS-3UTR CCA 90 bp | TCAGGGTCTCAGAAGTTTCTAGACTTAGCTCAACCAGGAAGCAGAATACCTTTCAGAACCAGCCTGGTCTaGAAATTAACTGAGTCATCT | + |
|
Preference number: 4 (lower is better) Translates to: SGSQKFLDLAQPGSRIPFRTSLV*KLTESS Trigger: AGATGACTCAGTTAATTTCCAGACCAGGCTGGTTCT...GAAAGGTATTCTGCTTCCTGGTTGAGCTAAGTCTAGAAACTTCTGAGACCCTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006392.3 |
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| CDS-3UTR GCA 90 bp | GTCCTCTGCAAGAGTAACAAGACTTGTACGGTGAAATCACTTCTAACTGGTTCTGGAATCCCTGATGGATaGCTTTCTCTTTCTTCAAAC | + |
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Preference number: 4 (lower is better) Translates to: VLCKSNKTCTVKSLLTGSGIPDG*LSLSSN Trigger: GTTTGAAGAAAGAGAAAGGCATCCATCAGGGATTCC...AGAACCAGTTAGAAGTGATTTCACCGTACAAGTCTTGTTACTCTTGCAGAGGAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006392.3 |
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| CDS-3UTR CCA 90 bp | GTGAGTGGTGGGAAATATTCCTTGGTCCTCTGCAAGAGTAACAAGACTTGTACGAAAATGGCATTTCCCTaGTGGATTCTTTGCAAAACT | + |
|
Preference number: 4 (lower is better) Translates to: VSGGKYSLVLCKSNKTCTKMAFP*WILCKT Trigger: AGTTTTGCAAAGAATCCACCAGGGAAATGCCATTTT...CGTACAAGTCTTGTTACTCTTGCAGAGGACCAAGGAATATTTCCCACCACTCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006392.3 |
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| CDS-3UTR TCA 90 bp | ATGAAAGCCTTGGAGGAAAACATAGCGCCAGTTATTTCTATACTTGACTTTAGTAGCTTCAGGAATCCCTaGTGGATGCCTTTCTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: MKALEENIAPVISILDFSSFRNP*WMPFSF Trigger: GAAAGAGAAAGGCATCCATCAGGGATTCCTGAAGCT...ACTAAAGTCAAGTATAGAAATAACTGGCGCTATGTTTTCCTCCAAGGCTTTCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006392.3 |
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| CDS-3UTR GCA 90 bp | ATGAAAGCCTTGGAGGAAAACATAGCGCCAGTTATTTCTATACTTGACTTTAGTGGCAAAGGTGCCATTTaGTTCAGACAGAGTACTCAT | + |
|
Preference number: 4 (lower is better) Translates to: MKALEENIAPVISILDFSGKGAI*FRQSTH Trigger: ATGAGTACTCTGTCTGAAGCAAATGGCACCTTTGCC...ACTAAAGTCAAGTATAGAAATAACTGGCGCTATGTTTTCCTCCAAGGCTTTCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006392.3 |
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| CDS TCA 90 bp | GGTCCGCACAGAACCATGATGGGCCACCACCTAAGCAGAGAGGAATaGTGCCCTCAGCGGAGGATGCTGCTGCAGCCTCTGTGCCTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: GPHRTMMGHHLSREE*CPQRRMLLQPLCLP Trigger: AGGAAGGCACAGAGGCTGCAGCAGCATCCTCCGCTGAGGGCATCATTCCTCTCTGCTTAGGTGGTGGCCCATCATGGTTCTGTGCGGACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006392.3 |
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| CDS-3UTR CAA 90 bp | GTGAGAAGTGCCTGGATCCCAGGAGCAGGCAAAGCTCCTACTGCCCCTTCAGGGAGGACTTCACAAGTTTaGTCTGCAAAGAGCCTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: VRSAWIPGAGKAPTAPSGRTSQV*SAKSLL Trigger: CAACAGGCTCTTTGCAGACAAAACTTGTGAAGTCCT...CCCTGAAGGGGCAGTAGGAGCTTTGCCTGCTCCTGGGATCCAGGCACTTCTCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006392.3 |
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| CDS-3UTR CAA 90 bp | GCTACAAATCTATTGGGAGCTGCAGCTAGTGAGAAGTGCCTGGATCCCAGGAGCTATTTTCTGTCTGGCTaGTTCAGCTTCCTGAGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: ATNLLGAAASEKCLDPRSYFLSG*FSFLRS Trigger: GCTTCTCAGGAAGCTGAACAAGCCAGACAGAAAATA...GCTCCTGGGATCCAGGCACTTCTCACTAGCTGCAGCTCCCAATAGATTTGTAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006392.3 |
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| CDS-3UTR CAA 90 bp | GCTACAAATCTATTGGGAGCTGCAGCTAGTGAGAAGTGCCTGGATCCCAGGAGCCAAGCCCACATCCCTTaGAAATATAAGGCATTGACG | + |
|
Preference number: 5 (lower is better) Translates to: ATNLLGAAASEKCLDPRSQAHIP*KYKALT Trigger: CGTCAATGCCTTATATTTCAAAGGGATGTGGGCTTG...GCTCCTGGGATCCAGGCACTTCTCACTAGCTGCAGCTCCCAATAGATTTGTAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006392.3 |
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| CDS GCA 90 bp | GGGATTTTGCCTTCAGTCTGTTTGGAGACCCACGTGTTTATGCATTaGCTGGACTCCACTGCAGCTTTGAAAAAGTTGACCTGCTCCATC | + |
|
Preference number: 5 (lower is better) Translates to: GILPSVCLETHVFMH*LDSTAALKKLTCSI Trigger: GATGGAGCAGGTCAACTTTTTCAAAGCTGCAGTGGAGTCCAGGCAATGCATAAACACGTGGGTCTCCAAACAGACTGAAGGCAAAATCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006392.3 |
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| CDS-3UTR CAA 90 bp | GCTACAAATCTATTGGGAGCTGCAGCTAGTGAGAAGTGCCTGGATCCCAGGAGCGGACTCCTTAAAGGTTaGGAGGACTTCACAAGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: ATNLLGAAASEKCLDPRSGLLKG*EDFTSF Trigger: AAAACTTGTGAAGTCCTCCAAACCTTTAAGGAGTCC...GCTCCTGGGATCCAGGCACTTCTCACTAGCTGCAGCTCCCAATAGATTTGTAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006392.3 |
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| CDS-3UTR CAA 90 bp | ATACAACTGCTCAGGGAGGCAAGACGTGGGAAGTTGACCACACTTACCACACTCGCAGCTTTGAAAAAGTaGACCTGCTCCATCTCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: IQLLREARRGKLTTLTTLAALKK*TCSISE Trigger: TTCAGAGATGGAGCAGGTCAACTTTTTCAAAGCTGC...GAGTGTGGTAAGTGTGGTCAACTTCCCACGTCTTGCCTCCCTGAGCAGTTGTAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006392.3 |
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| CDS-3UTR CAA 90 bp | TTATTGTTCTCAGGCTCTTGGACATCCAGGCATCACTGGAAACCATGGAAGAGCAGATCATTTTCCACCTaGCTGAGGTCCACACCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LLFSGSWTSRHHWKPWKSRSFST*LRSTPF Trigger: GAAGGGTGTGGACCTCAGCAAGGTGGAAAATGATCT...GCTCTTCCATGGTTTCCAGTGATGCCTGGATGTCCAAGAGCCTGAGAACAATAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006392.3 |
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| CDS-3UTR CAA 90 bp | GTGAGTGGTGGGAAATATTCCTTGGTCCTCTGCAAGAGTAACAAGACTTGTACGTGGCAAAGGTGCCATTaGCTTCAGACAGAGTACTCA | + |
|
Preference number: 5 (lower is better) Translates to: VSGGKYSLVLCKSNKTCTWQRCH*LQTEYS Trigger: TGAGTACTCTGTCTGAAGCAAATGGCACCTTTGCCA...CGTACAAGTCTTGTTACTCTTGCAGAGGACCAAGGAATATTTCCCACCACTCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006392.3 |
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| CDS-3UTR CAA 90 bp | TCAGGGTCTCAGAAGTTTCTAGACTTAGCTCAACCAGGAAGCAGAATACCTTTCTCTGTGCCTTCCTCATaGACCTCCACTACACTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: SGSQKFLDLAQPGSRIPFSVPSS*TSTTLL Trigger: CAAGAGTGTAGTGGAGGTCAATGAGGAAGGCACAGA...GAAAGGTATTCTGCTTCCTGGTTGAGCTAAGTCTAGAAACTTCTGAGACCCTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006392.3 |
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| CDS-3UTR CAA 90 bp | GAAAGCAGGCATCATAAGATCAGGCTGACAGGGAGAAAGTGCCTTCATCTTAGAAACAACTCTGGGATTTaGCCTTCAGTCTGTTTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: ESRHHKIRLTGRKCLHLRNNSGI*PSVCLE Trigger: CTCCAAACAGACTGAAGGCAAAATCCCAGAGTTGTT...TCTAAGATGAAGGCACTTTCTCCCTGTCAGCCTGATCTTATGATGCCTGCTTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006392.3 |
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| CDS-3UTR CAA 90 bp | GTCCTCTGCAAGAGTAACAAGACTTGTACGGTGAAATCACTTCTAACTGGTTCTTTCTCTCTGGAGACATaGCTGATAAGTCAGCCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: VLCKSNKTCTVKSLLTGSFSLET*LISQPF Trigger: AAAAGGCTGACTTATCAGCAATGTCTCCAGAGAGAA...AGAACCAGTTAGAAGTGATTTCACCGTACAAGTCTTGTTACTCTTGCAGAGGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006392.3 |
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| CDS CCA 90 bp | CACAAAGGCAAACATAAATGTGTCTGTCTGACACATCATCTGCACTaGCCTTTTCTCATCCTTGTTTATGTAAAATGGCATTTCCCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: HKGKHKCVCLTHHLH*PFLILVYVKWHFPG Trigger: ACCAGGGAAATGCCATTTTACATAAACAAGGATGAGAAAAGGCCAGTGCAGATGATGTGTCAGACAGACACATTTATGTTTGCCTTTGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006392.3 |
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| CDS CCA 72 bp | ATCATTTTCCACCTTGCTGAGGTCCACACCCTTCTCTaGGAGCAGGACCATCAAGCTCAGCTCCATGCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: IIFHLAEVHTLL*EQDHQAQLHAF Trigger: GAAGGCATGGAGCTGAGCTTGATGGTCCTGCTCCCAGAGAAGGGTGTGGACCTCAGCAAGGTGGAAAATGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006392.3 |
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| CDS GCA 72 bp | CTCTTTCTTCAAACCAAGTGCCTGAGATATCTGGACTaGGGTCTGCTCCTTTGCACCCAGGAGGACCATAGC | + |
|
Preference number: 6 (lower is better) Translates to: LFLQTKCLRYLD*GLLLCTQEDHS Trigger: GCTATGGTCCTCCTGGGTGCAAAGGAGCAGACCGCAGTCCAGATATCTCAGGCACTTGGTTTGAAGAAAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006392.3 |
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| CDS GCA 72 bp | TCCCTGATGGATGCCTTTCTCTTTCTTCAAACCAAGTaGCTGAGATATCTGGACTGCGGTCTGCTCCTTTGC | + |
|
Preference number: 6 (lower is better) Translates to: SLMDAFLFLQTK*LRYLDCGLLLC Trigger: GCAAAGGAGCAGACCGCAGTCCAGATATCTCAGGCACTTGGTTTGAAGAAAGAGAAAGGCATCCATCAGGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006392.3 |
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| CDS TCA 72 bp | GGCTTGTTCAGCTTCCTGAGAAGCTTCAGGAATCCCTaGTGGATGCCTTTCTCTTTCTTCAAACCAAGTGCC | + |
|
Preference number: 6 (lower is better) Translates to: GLFSFLRSFRNP*WMPFSFFKPSA Trigger: GGCACTTGGTTTGAAGAAAGAGAAAGGCATCCATCAGGGATTCCTGAAGCTTCTCAGGAAGCTGAACAAGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006392.3 |
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| CDS TCA 72 bp | GGCATTGACGAGAACCAGCCTGGTCTGGAAATTAACTaGGTCATCTGCCAACAACTCTGGGATTTTGCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: GIDENQPGLEIN*VICQQLWDFAF Trigger: GAAGGCAAAATCCCAGAGTTGTTGGCAGATGACTCAGTTAATTTCCAGACCAGGCTGGTTCTCGTCAATGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006392.3 |
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| CDS CCA 72 bp | GAGCCTGTTGGCCACTATAAGGGAGTATTTTCTGTCTaGCTTGTTCAGCTTCCTGAGAAGCTTCAGGAATCC | + |
|
Preference number: 6 (lower is better) Translates to: EPVGHYKGVFSV*LVQLPEKLQES Trigger: GGATTCCTGAAGCTTCTCAGGAAGCTGAACAAGCCAGACAGAAAATACTCCCTTATAGTGGCCAACAGGCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006392.3 |
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| CDS CAA 72 bp | GCCTTCAGTCTGTTTGGAGACCCACGTGTTTATGCATaGCCTGGACTCCACTGCAGCTTTGAAAAAGTTGAC | + |
|
Preference number: 6 (lower is better) Translates to: AFSLFGDPRVYA*PGLHCSFEKVD Trigger: GTCAACTTTTTCAAAGCTGCAGTGGAGTCCAGGCAATGCATAAACACGTGGGTCTCCAAACAGACTGAAGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006392.3 |
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| CDS CAA 90 bp | TGGGATTTTGCCTTCAGTCTGTTTGGAGACCCACGTGTTTATGCATaGCCTGGACTCCACTGCAGCTTTGAAAAAGTTGACCTGCTCCAT | + |
|
Preference number: 6 (lower is better) Translates to: WDFAFSLFGDPRVYA*PGLHCSFEKVDLLH Trigger: ATGGAGCAGGTCAACTTTTTCAAAGCTGCAGTGGAGTCCAGGCAATGCATAAACACGTGGGTCTCCAAACAGACTGAAGGCAAAATCCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006392.3 |
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| CDS CAA 90 bp | CTGGTCTGGAAATTAACTGAGTCATCTGCCAACAACTCTGGGATTTaGCCTTCAGTCTGTTTGGAGACCCACGTGTTTATGCATTGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: LVWKLTESSANNSGI*PSVCLETHVFMHCL Trigger: CAGGCAATGCATAAACACGTGGGTCTCCAAACAGACTGAAGGCAAAATCCCAGAGTTGTTGGCAGATGACTCAGTTAATTTCCAGACCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006392.3 |
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| CDS CCA 72 bp | CTCCATGCCTTCATAGGGCATTATCAGCAATCTAGCTaGCAACTCATCCACAAAGGCAAACATAAATGTGTC | + |
|
Preference number: 6 (lower is better) Translates to: LHAFIGHYQQSS*QLIHKGKHKCV Trigger: GACACATTTATGTTTGCCTTTGTGGATGAGTTGCCAGCTAGATTGCTGATAATGCCCTATGAAGGCATGGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006392.3 |
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| CDS TCA 72 bp | AACTCATCCACAAAGGCAAACATAAATGTGTCTGTCTaGCACATCATCTGCACTGGCCTTTTCTCATCCTTG | + |
|
Preference number: 6 (lower is better) Translates to: NSSTKANINVSV*HIICTGLFSSL Trigger: CAAGGATGAGAAAAGGCCAGTGCAGATGATGTGTCAGACAGACACATTTATGTTTGCCTTTGTGGATGAGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006392.3 |
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| CDS CCA 72 bp | TCTCATCCTTGTTTATGTAAAATGGCATTTCCCTGGTaGATTCTTTGCAAAACTGGCAAGCCCACATCCCTT | + |
|
Preference number: 6 (lower is better) Translates to: SHPCLCKMAFPW*ILCKTGKPTSL Trigger: AAGGGATGTGGGCTTGCCAGTTTTGCAAAGAATCCACCAGGGAAATGCCATTTTACATAAACAAGGATGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006392.3 |
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| CDS CAA 72 bp | AAATTAACTGAGTCATCTGCCAACAACTCTGGGATTTaGCCTTCAGTCTGTTTGGAGACCCACGTGTTTATG | + |
|
Preference number: 6 (lower is better) Translates to: KLTESSANNSGI*PSVCLETHVFM Trigger: CATAAACACGTGGGTCTCCAAACAGACTGAAGGCAAAATCCCAGAGTTGTTGGCAGATGACTCAGTTAATTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006392.3 |
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| CDS CAA 90 bp | CACAATTCCCAAGCACTGAAGCACAGATTTCATCTCATAATCCTCTaGCAGTTTAAATTTTGGAAGGAAAACCTTAACCTCAGTGGACCA | + |
|
Preference number: 6 (lower is better) Translates to: HNSQALKHRFHLIIL*QFKFWKENLNLSGP Trigger: TGGTCCACTGAGGTTAAGGTTTTCCTTCCAAAATTTAAACTGCAAGAGGATTATGAGATGAAATCTGTGCTTCAGTGCTTGGGAATTGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006392.3 |
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| CDS CAA 72 bp | CAAGCACTGAAGCACAGATTTCATCTCATAATCCTCTaGCAGTTTAAATTTTGGAAGGAAAACCTTAACCTC | + |
|
Preference number: 6 (lower is better) Translates to: QALKHRFHLIIL*QFKFWKENLNL Trigger: GAGGTTAAGGTTTTCCTTCCAAAATTTAAACTGCAAGAGGATTATGAGATGAAATCTGTGCTTCAGTGCTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006392.3 |
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