Pregenerated sensors for SERPINB9 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000045827Ensembl transcript IDs: ENSMUST00000006391.5, ENSMUST00000063191.14
Found 110 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GAAGTCAGAAGAATGCCAACGGGGCAAGAAACTGGAGGCAGGAGCTaGTGCAGAGGCCACAGAGGAATGCTGCTTACTGGCTTGCTCCTC | + |
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Preference number: 1 (lower is better) Translates to: EVRRMPTGQETGGRS*CRGHRGMLLTGLLL Trigger: GAGGAGCAAGCCAGTAAGCAGCATTCCTCTGTGGCCTCTGCATCAGCTCCTGCCTCCAGTTTCTTGCCCCGTTGGCATTCTTCTGACTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006391.5 ENSMUST00000063191.14 |
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| 3UTR GCA 90 bp | AAGAAACTGGAGGCAGGAGCTGATGCAGAGGCCACAGAGGAATGCTaGTTACTGGCTTGCTCCTCCTGGTTTGTTCAGCCTGCTTCCTTA | + |
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Preference number: 1 (lower is better) Translates to: KKLEAGADAEATEEC*LLACSSWFVQPASL Trigger: TAAGGAAGCAGGCTGAACAAACCAGGAGGAGCAAGCCAGTAAGCAGCATTCCTCTGTGGCCTCTGCATCAGCTCCTGCCTCCAGTTTCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006391.5 ENSMUST00000063191.14 |
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| 3UTR CCA 90 bp | TGGACAGAAACTGGAATTTCCAGAGGTTGTAAGCAGCCATGTGAGTaGTGGGAAATGTCCCTGTGTCCTCTGCAAAAACAGCAACCTTTC | + |
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Preference number: 1 (lower is better) Translates to: WTETGISRGCKQPCE*WEMSLCPLQKQQPF Trigger: GAAAGGTTGCTGTTTTTGCAGAGGACACAGGGACATTTCCCACCACTCACATGGCTGCTTACAACCTCTGGAAATTCCAGTTTCTGTCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006391.5 ENSMUST00000063191.14 |
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| 3UTR CCA 90 bp | ACATACAATGGGCCTAGCCTTCTCACATTAATGCTCCAGAGCATATaGAGACATTTCTTAATTGAGGCTCTTTCCTCTCCAGTGACTCTA | + |
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Preference number: 1 (lower is better) Translates to: TYNGPSLLTLMLQSI*RHFLIEALSSPVTL Trigger: TAGAGTCACTGGAGAGGAAAGAGCCTCAATTAAGAAATGTCTCCATATGCTCTGGAGCATTAATGTGAGAAGGCTAGGCCCATTGTATGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006391.5 ENSMUST00000063191.14 |
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| 3UTR TCA 90 bp | CATTCAAGACAGGGAGAGTTGAATGCAGGCATTATAAGATCAGGCTaGCAAGAAGAAAGTGTCTTCATCTTAGAACATGACTTCCCCCTA | + |
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Preference number: 1 (lower is better) Translates to: HSRQGELNAGIIRSG*QEESVFILEHDFPL Trigger: TAGGGGGAAGTCATGTTCTAAGATGAAGACACTTTCTTCTTGTCAGCCTGATCTTATAATGCCTGCATTCAACTCTCCCTGTCTTGAATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006391.5 ENSMUST00000063191.14 |
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| 3UTR TCA 90 bp | GGAGGAAGAATGGAGAGTCACTGCTTGATGGTTAAACAATGTGTTTaGAAGGGGATGAAGATAAGATCACAGCATGGCACTGATGTTTTC | + |
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Preference number: 1 (lower is better) Translates to: GGRMESHCLMVKQCV*KGMKIRSQHGTDVF Trigger: GAAAACATCAGTGCCATGCTGTGATCTTATCTTCATCCCCTTTCAAACACATTGTTTAACCATCAAGCAGTGACTCTCCATTCTTCCTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006391.5 ENSMUST00000063191.14 |
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| 3UTR TCA 90 bp | AGAAAAGGTTTATTTGGCTTATACGTTTACATCACTGTTCATCAATaGAGGAAGTCAGAAGAATGCCAACGGGGCAAGAAACTGGAGGCA | + |
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Preference number: 1 (lower is better) Translates to: RKGLFGLYVYITVHQ*RKSEECQRGKKLEA Trigger: TGCCTCCAGTTTCTTGCCCCGTTGGCATTCTTCTGACTTCCTTCATTGATGAACAGTGATGTAAACGTATAAGCCAAATAAACCTTTTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006391.5 ENSMUST00000063191.14 |
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| 3UTR CCA 90 bp | ACCTTCTGGAAACCAGGACACATGTTGATGTATAAGAGTATATCCTaGCTTAGCTTTATCCCTTTTAGGATCACATGGTCCCCTATTACT | + |
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Preference number: 1 (lower is better) Translates to: TFWKPGHMLMYKSIS*LSFIPFRITWSPIT Trigger: AGTAATAGGGGACCATGTGATCCTAAAAGGGATAAAGCTAAGCCAGGATATACTCTTATACATCAACATGTGTCCTGGTTTCCAGAAGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006391.5 ENSMUST00000063191.14 |
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| 3UTR TCA 90 bp | GGGATATGTCCTCAAATTGAACCTTCTGGAAACCAGGACACATGTTaGTGTATAAGAGTATATCCTGGCTTAGCTTTATCCCTTTTAGGA | + |
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Preference number: 1 (lower is better) Translates to: GICPQIEPSGNQDTC*CIRVYPGLALSLLG Trigger: TCCTAAAAGGGATAAAGCTAAGCCAGGATATACTCTTATACATCAACATGTGTCCTGGTTTCCAGAAGGTTCAATTTGAGGACATATCCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006391.5 ENSMUST00000063191.14 |
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| 3UTR CCA 90 bp | CTTCTATCCTACCCCACTAGTTGTAACATTATTTTTCCTATTCATTaGTCATTACCTCATGATTCAAAGCAATTACAAGTACAGCGACAA | + |
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Preference number: 1 (lower is better) Translates to: LLSYPTSCNIIFPIH*SLPHDSKQLQVQRQ Trigger: TTGTCGCTGTACTTGTAATTGCTTTGAATCATGAGGTAATGACCAATGAATAGGAAAAATAATGTTACAACTAGTGGGGTAGGATAGAAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000006391.5 ENSMUST00000063191.14 |
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| 3UTR CAA 90 bp | CAGAGGCCACAGAGGAATGCTGCTTACTGGCTTGCTCCTCCTGGTTaGTTCAGCCTGCTTCCTTATAATCAGAGGACCACCTGCATAGGG | + |
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Preference number: 2 (lower is better) Translates to: QRPQRNAAYWLAPPG*FSLLPYNQRTTCIG Trigger: CCCTATGCAGGTGGTCCTCTGATTATAAGGAAGCAGGCTGAACAAACCAGGAGGAGCAAGCCAGTAAGCAGCATTCCTCTGTGGCCTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006391.5 ENSMUST00000063191.14 |
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| 3UTR-3UTR TCA 90 bp | GCTACAGAGACAGAGAGAAGATTGGTGGTTATATGTCCAAAGGGAGGAAGAATGCCTACTTGCCCATCTTaGCAGAGCTGTAGGAGTGGT | + |
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Preference number: 2 (lower is better) Translates to: ATETERRLVVICPKGGRMPTCPS*QSCRSG Trigger: ACCACTCCTACAGCTCTGTCAAGATGGGCAAGTAGG...CATTCTTCCTCCCTTTGGACATATAACCACCAATCTTCTCTCTGTCTCTGTAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006391.5 ENSMUST00000063191.14 |
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| 3UTR-3UTR GCA 90 bp | GCTACAGAGACAGAGAGAAGATTGGTGGTTATATGTCCAAAGGGAGGAAGAATGTGTCCCTGTGTCCTCTaGAAAAACAGCAACCTTTCC | + |
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Preference number: 2 (lower is better) Translates to: ATETERRLVVICPKGGRMCPCVL*KNSNLS Trigger: GGAAAGGTTGCTGTTTTTGCAGAGGACACAGGGACA...CATTCTTCCTCCCTTTGGACATATAACCACCAATCTTCTCTCTGTCTCTGTAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006391.5 ENSMUST00000063191.14 |
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| 3UTR-3UTR TCA 90 bp | AAGGAATCACATCAGGCTCCAACACCACACCACATATGGAATTTAATTCAAACTCCTACTTGCCCATCTTaGCAGAGCTGTAGGAGTGGT | + |
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Preference number: 2 (lower is better) Translates to: KESHQAPTPHHIWNLIQTPTCPS*QSCRSG Trigger: ACCACTCCTACAGCTCTGTCAAGATGGGCAAGTAGG...AGTTTGAATTAAATTCCATATGTGGTGTGGTGTTGGAGCCTGATGTGATTCCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006391.5 ENSMUST00000063191.14 |
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| 3UTR-3UTR GCA 90 bp | GCTACAGAGACAGAGAGAAGATTGGTGGTTATATGTCCAAAGGGAGGAAGAATGGGTAAAGGGCATAGATaGATTCAAGACAGGGAGAGT | + |
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Preference number: 2 (lower is better) Translates to: ATETERRLVVICPKGGRMGKGHR*IQDRES Trigger: ACTCTCCCTGTCTTGAATGCATCTATGCCCTTTACC...CATTCTTCCTCCCTTTGGACATATAACCACCAATCTTCTCTCTGTCTCTGTAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006391.5 ENSMUST00000063191.14 |
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| 3UTR-3UTR CCA 90 bp | CCTACCCCACTAGTTGTAACATTATTTTTCCTATTCATTGGTCATTACCTCATGCAGCCATGTGAGTGGTaGGAAATGTCCCTGTGTCCT | + |
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Preference number: 2 (lower is better) Translates to: PTPLVVTLFFLFIGHYLMQPCEW*EMSLCP Trigger: AGGACACAGGGACATTTCCCACCACTCACATGGCTG...CATGAGGTAATGACCAATGAATAGGAAAAATAATGTTACAACTAGTGGGGTAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000006391.5 ENSMUST00000063191.14 |
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| 3UTR-3UTR CCA 90 bp | AACACCACACCACATATGGAATTTAATTCAAACTGGAACAGTGACCTAGATATAAAGCAGCCATGTGAGTaGTGGGAAATGTCCCTGTGT | + |
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Preference number: 2 (lower is better) Translates to: NTTPHMEFNSNWNSDLDIKQPCE*WEMSLC Trigger: ACACAGGGACATTTCCCACCACTCACATGGCTGCTT...TATATCTAGGTCACTGTTCCAGTTTGAATTAAATTCCATATGTGGTGTGGTGTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006391.5 ENSMUST00000063191.14 |
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| 3UTR CAA 90 bp | GAGATCATAGTCACTGTCTTTTTGTGGACTTCAGTAATGACATCATaGGGATATGTCCTCAAATTGAACCTTCTGGAAACCAGGACACAT | + |
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Preference number: 2 (lower is better) Translates to: EIIVTVFLWTSVMTS*GYVLKLNLLETRTH Trigger: ATGTGTCCTGGTTTCCAGAAGGTTCAATTTGAGGACATATCCCAATGATGTCATTACTGAAGTCCACAAAAAGACAGTGACTATGATCTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006391.5 ENSMUST00000063191.14 |
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| 3UTR-3UTR GCA 90 bp | CCTACCCCACTAGTTGTAACATTATTTTTCCTATTCATTGGTCATTACCTCATGGGTAAAGGGCATAGATaGATTCAAGACAGGGAGAGT | + |
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Preference number: 2 (lower is better) Translates to: PTPLVVTLFFLFIGHYLMGKGHR*IQDRES Trigger: ACTCTCCCTGTCTTGAATGCATCTATGCCCTTTACC...CATGAGGTAATGACCAATGAATAGGAAAAATAATGTTACAACTAGTGGGGTAGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000006391.5 ENSMUST00000063191.14 |
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| 3UTR-3UTR GCA 90 bp | AACACCACACCACATATGGAATTTAATTCAAACTGGAACAGTGACCTAGATATAGACGATACATGTATGTaGAGGATGCTGGAGCCAGTA | + |
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Preference number: 2 (lower is better) Translates to: NTTPHMEFNSNWNSDLDIDDTCM*RMLEPV Trigger: TACTGGCTCCAGCATCCTGCACATACATGTATCGTC...TATATCTAGGTCACTGTTCCAGTTTGAATTAAATTCCATATGTGGTGTGGTGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006391.5 ENSMUST00000063191.14 |
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| 3UTR-3UTR GCA 90 bp | AAGGAATCACATCAGGCTCCAACACCACACCACATATGGAATTTAATTCAAACTTTCTTAGCTGCAGCATaGATACCTCATGATCAGAAC | + |
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Preference number: 2 (lower is better) Translates to: KESHQAPTPHHIWNLIQTFLAAA*IPHDQN Trigger: GTTCTGATCATGAGGTATGCATGCTGCAGCTAAGAA...AGTTTGAATTAAATTCCATATGTGGTGTGGTGTTGGAGCCTGATGTGATTCCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006391.5 ENSMUST00000063191.14 |
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| 3UTR-3UTR TCA 90 bp | GGCTATAAATTACTGGCTAGGCTATCAATCAATAGCATAGCAGAAGGTATTTGGATTATAAGATCAGGCTaGCAAGAAGAAAGTGTCTTC | + |
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Preference number: 2 (lower is better) Translates to: GYKLLARLSINSIAEGIWIIRSG*QEESVF Trigger: GAAGACACTTTCTTCTTGTCAGCCTGATCTTATAAT...CCAAATACCTTCTGCTATGCTATTGATTGATAGCCTAGCCAGTAATTTATAGCC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006391.5 ENSMUST00000063191.14 |
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| 3UTR-3UTR CCA 90 bp | AAGGAATCACATCAGGCTCCAACACCACACCACATATGGAATTTAATTCAAACTAAAGGAATCAAGTCATaGACAGAAACTGGAATTTCC | + |
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Preference number: 2 (lower is better) Translates to: KESHQAPTPHHIWNLIQTKGIKS*TETGIS Trigger: GGAAATTCCAGTTTCTGTCCATGACTTGATTCCTTT...AGTTTGAATTAAATTCCATATGTGGTGTGGTGTTGGAGCCTGATGTGATTCCTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006391.5 ENSMUST00000063191.14 |
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| 3UTR CAA 90 bp | TTTGCTGCTATAAATATGGCTACAGAGATCATAGTCACTGTCTTTTaGTGGACTTCAGTAATGACATCATTGGGATATGTCCTCAAATTG | + |
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Preference number: 2 (lower is better) Translates to: FAAINMATEIIVTVF*WTSVMTSLGYVLKL Trigger: CAATTTGAGGACATATCCCAATGATGTCATTACTGAAGTCCACAAAAAGACAGTGACTATGATCTCTGTAGCCATATTTATAGCAGCAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006391.5 ENSMUST00000063191.14 |
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| 3UTR-3UTR TCA 90 bp | TTCTTAATTGAGGCTCTTTCCTCTCCAGTGACTCTACCTTGTATCACATTAATAAATGACATTAAAACCTaGAAAAGGCACAATAGCAGC | + |
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Preference number: 2 (lower is better) Translates to: FLIEALSSPVTLPCITLINDIKT*KRHNSS Trigger: GCTGCTATTGTGCCTTTTTCAGGTTTTAATGTCATT...TATTAATGTGATACAAGGTAGAGTCACTGGAGAGGAAAGAGCCTCAATTAAGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006391.5 ENSMUST00000063191.14 |
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| 3UTR-3UTR CCA 90 bp | TTAATGTTCAATATATGTACTGAGGAACTTCTATCCTACCCCACTAGTTGTAACAAAGGAATCAAGTCATaGACAGAAACTGGAATTTCC | + |
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Preference number: 2 (lower is better) Translates to: LMFNICTEELLSYPTSCNKGIKS*TETGIS Trigger: GGAAATTCCAGTTTCTGTCCATGACTTGATTCCTTT...GTTACAACTAGTGGGGTAGGATAGAAGTTCCTCAGTACATATATTGAACATTAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006391.5 ENSMUST00000063191.14 |
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| 3UTR CCA 72 bp | GGAATTTCCAGAGGTTGTAAGCAGCCATGTGAGTGGTaGGAAATGTCCCTGTGTCCTCTGCAAAAACAGCAA | + |
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Preference number: 3 (lower is better) Translates to: GISRGCKQPCEW*EMSLCPLQKQQ Trigger: TTGCTGTTTTTGCAGAGGACACAGGGACATTTCCCACCACTCACATGGCTGCTTACAACCTCTGGAAATTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006391.5 ENSMUST00000063191.14 |
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| 3UTR CCA 72 bp | ACTGGAATTTCCAGAGGTTGTAAGCAGCCATGTGAGTaGTGGGAAATGTCCCTGTGTCCTCTGCAAAAACAG | + |
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Preference number: 3 (lower is better) Translates to: TGISRGCKQPCE*WEMSLCPLQKQ Trigger: CTGTTTTTGCAGAGGACACAGGGACATTTCCCACCACTCACATGGCTGCTTACAACCTCTGGAAATTCCAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006391.5 ENSMUST00000063191.14 |
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| 3UTR CCA 72 bp | GGGCCTAGCCTTCTCACATTAATGCTCCAGAGCATATaGAGACATTTCTTAATTGAGGCTCTTTCCTCTCCA | + |
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Preference number: 3 (lower is better) Translates to: GPSLLTLMLQSI*RHFLIEALSSP Trigger: TGGAGAGGAAAGAGCCTCAATTAAGAAATGTCTCCATATGCTCTGGAGCATTAATGTGAGAAGGCTAGGCCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006391.5 ENSMUST00000063191.14 |
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| 3UTR GCA 72 bp | AAGGGCATAGATGCATTCAAGACAGGGAGAGTTGAATaGAGGCATTATAAGATCAGGCTGACAAGAAGAAAG | + |
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Preference number: 3 (lower is better) Translates to: KGIDAFKTGRVE*RHYKIRLTRRK Trigger: CTTTCTTCTTGTCAGCCTGATCTTATAATGCCTGCATTCAACTCTCCCTGTCTTGAATGCATCTATGCCCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006391.5 ENSMUST00000063191.14 |
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| 3UTR-3UTR CAA 90 bp | GGCTATAAATTACTGGCTAGGCTATCAATCAATAGCATAGCAGAAGGTATTTGGTCAAGACAGGGAGAGTaGAATGCAGGCATTATAAGA | + |
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Preference number: 3 (lower is better) Translates to: GYKLLARLSINSIAEGIWSRQGE*NAGIIR Trigger: TCTTATAATGCCTGCATTCAACTCTCCCTGTCTTGA...CCAAATACCTTCTGCTATGCTATTGATTGATAGCCTAGCCAGTAATTTATAGCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006391.5 ENSMUST00000063191.14 |
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| 3UTR TCA 72 bp | CCTCAAATTGAACCTTCTGGAAACCAGGACACATGTTaGTGTATAAGAGTATATCCTGGCTTAGCTTTATCC | + |
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Preference number: 3 (lower is better) Translates to: PQIEPSGNQDTC*CIRVYPGLALS Trigger: GGATAAAGCTAAGCCAGGATATACTCTTATACATCAACATGTGTCCTGGTTTCCAGAAGGTTCAATTTGAGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006391.5 ENSMUST00000063191.14 |
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| 3UTR CCA 72 bp | AAACCAGGACACATGTTGATGTATAAGAGTATATCCTaGCTTAGCTTTATCCCTTTTAGGATCACATGGTCC | + |
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Preference number: 3 (lower is better) Translates to: KPGHMLMYKSIS*LSFIPFRITWS Trigger: GGACCATGTGATCCTAAAAGGGATAAAGCTAAGCCAGGATATACTCTTATACATCAACATGTGTCCTGGTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006391.5 ENSMUST00000063191.14 |
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| 3UTR-3UTR CAA 90 bp | AAGGAATCACATCAGGCTCCAACACCACACCACATATGGAATTTAATTCAAACTCATAGCAGAAGGTATTaGGCATCATTAGACATAACC | + |
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Preference number: 3 (lower is better) Translates to: KESHQAPTPHHIWNLIQTHSRRY*ASLDIT Trigger: GGTTATGTCTAATGATGCCAAATACCTTCTGCTATG...AGTTTGAATTAAATTCCATATGTGGTGTGGTGTTGGAGCCTGATGTGATTCCTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006391.5 ENSMUST00000063191.14 |
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| 3UTR TCA 72 bp | TTATTTGGCTTATACGTTTACATCACTGTTCATCAATaGAGGAAGTCAGAAGAATGCCAACGGGGCAAGAAA | + |
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Preference number: 3 (lower is better) Translates to: LFGLYVYITVHQ*RKSEECQRGKK Trigger: TTTCTTGCCCCGTTGGCATTCTTCTGACTTCCTTCATTGATGAACAGTGATGTAAACGTATAAGCCAAATAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006391.5 ENSMUST00000063191.14 |
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| 3UTR-3UTR CAA 90 bp | CCTACCCCACTAGTTGTAACATTATTTTTCCTATTCATTGGTCATTACCTCATGCATAGCAGAAGGTATTaGGCATCATTAGACATAACC | + |
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Preference number: 3 (lower is better) Translates to: PTPLVVTLFFLFIGHYLMHSRRY*ASLDIT Trigger: GGTTATGTCTAATGATGCCAAATACCTTCTGCTATG...CATGAGGTAATGACCAATGAATAGGAAAAATAATGTTACAACTAGTGGGGTAGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000006391.5 ENSMUST00000063191.14 |
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| 3UTR GCA 72 bp | TACTGTATGAGATTGACACCTGGATCCATTATTTGCTaGTATAAATATGGCTACAGAGATCATAGTCACTGT | + |
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Preference number: 3 (lower is better) Translates to: YCMRLTPGSIIC*YKYGYRDHSHC Trigger: ACAGTGACTATGATCTCTGTAGCCATATTTATAGCAGCAAATAATGGATCCAGGTGTCAATCTCATACAGTA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006391.5 ENSMUST00000063191.14 |
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| 3UTR-3UTR CAA 90 bp | TTAATGTTCAATATATGTACTGAGGAACTTCTATCCTACCCCACTAGTTGTAACATGGAGAGTCACTGCTaGATGGTTAAACAATGTGTT | + |
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Preference number: 3 (lower is better) Translates to: LMFNICTEELLSYPTSCNMESHC*MVKQCV Trigger: AACACATTGTTTAACCATCAAGCAGTGACTCTCCAT...GTTACAACTAGTGGGGTAGGATAGAAGTTCCTCAGTACATATATTGAACATTAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006391.5 ENSMUST00000063191.14 |
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| 3UTR-3UTR CAA 90 bp | AACACCACACCACATATGGAATTTAATTCAAACTGGAACAGTGACCTAGATATAATGGAGAGTCACTGCTaGATGGTTAAACAATGTGTT | + |
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Preference number: 3 (lower is better) Translates to: NTTPHMEFNSNWNSDLDIMESHC*MVKQCV Trigger: AACACATTGTTTAACCATCAAGCAGTGACTCTCCAT...TATATCTAGGTCACTGTTCCAGTTTGAATTAAATTCCATATGTGGTGTGGTGTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006391.5 ENSMUST00000063191.14 |
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| 3UTR-3UTR CAA 90 bp | TTCTTAATTGAGGCTCTTTCCTCTCCAGTGACTCTACCTTGTATCACATTAATATCAGTAATGACATCATaGGGATATGTCCTCAAATTG | + |
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Preference number: 3 (lower is better) Translates to: FLIEALSSPVTLPCITLISVMTS*GYVLKL Trigger: CAATTTGAGGACATATCCCAATGATGTCATTACTGA...TATTAATGTGATACAAGGTAGAGTCACTGGAGAGGAAAGAGCCTCAATTAAGAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006391.5 ENSMUST00000063191.14 |
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| CDS-3UTR GCA 90 bp | CCAGAGGTTGTAAGCAGCCATGTGAGTGGTGGGAAATGTCCCTGTGTCCTCTGCGGCATCACCAGCACTTaGGCCTGCACCTCCTTCACA | + |
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Preference number: 4 (lower is better) Translates to: PEVVSSHVSGGKCPCVLCGITST*ACTSFT Trigger: TGTGAAGGAGGTGCAGGCGCAAGTGCTGGTGATGCC...GCAGAGGACACAGGGACATTTCCCACCACTCACATGGCTGCTTACAACCTCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006391.5 ENSMUST00000063191.14 |
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| CDS-3UTR GCA 90 bp | GACTTCCCCCTACTTGCCCATCTTGACAGAGCTGTAGGAGTGGTAGGGATACTGTTGCCTGGACACCTCTaGTTCTTCAGCAAAGGAGAG | + |
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Preference number: 4 (lower is better) Translates to: DFPLLAHLDRAVGVVGILLPGHL*FFSKGE Trigger: CTCTCCTTTGCTGAAGAAGCAGAGGTGTCCAGGCAA...CAGTATCCCTACCACTCCTACAGCTCTGTCAAGATGGGCAAGTAGGGGGAAGTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006391.5 ENSMUST00000063191.14 |
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| CDS-3UTR CCA 90 bp | CCAGAGGTTGTAAGCAGCCATGTGAGTGGTGGGAAATGTCCCTGTGTCCTCTGCTGTTTATGTGTTGCCTaGACACCTCTGCTTCTTCAG | + |
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Preference number: 4 (lower is better) Translates to: PEVVSSHVSGGKCPCVLCCLCVA*TPLLLQ Trigger: CTGAAGAAGCAGAGGTGTCCAGGCAACACATAAACA...GCAGAGGACACAGGGACATTTCCCACCACTCACATGGCTGCTTACAACCTCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006391.5 ENSMUST00000063191.14 |
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| CDS-3UTR CCA 90 bp | GACTTCCCCCTACTTGCCCATCTTGACAGAGCTGTAGGAGTGGTAGGGATACTGAGAGTACTTTCTGTCTaGCTTGTTCAGCTTCCTGAG | + |
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Preference number: 4 (lower is better) Translates to: DFPLLAHLDRAVGVVGILRVLSV*LVQLPE Trigger: CTCAGGAAGCTGAACAAGCCAGACAGAAAGTACTCT...CAGTATCCCTACCACTCCTACAGCTCTGTCAAGATGGGCAAGTAGGGGGAAGTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006391.5 ENSMUST00000063191.14 |
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| CDS-3UTR CCA 90 bp | CAAGAAGAAAGTGTCTTCATCTTAGAACATGACTTCCCCCTACTTGCCCATCTTGTCCACACCCTCATCTaGGAGCAGAACCACCAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: QEESVFILEHDFPLLAHLVHTLI*EQNHQA Trigger: AGCTTGGTGGTTCTGCTCCCAGATGAGGGTGTGGAC...AAGATGGGCAAGTAGGGGGAAGTCATGTTCTAAGATGAAGACACTTTCTTCTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006391.5 ENSMUST00000063191.14 |
||
| CDS-3UTR TCA 90 bp | GCTACAGAGACAGAGAGAAGATTGGTGGTTATATGTCCAAAGGGAGGAAGAATGCTGTGCCTTCCTCATTaGTCTCCACTACACTCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: ATETERRLVVICPKGGRMLCLPH*SPLHSG Trigger: ACCAGAGTGTAGTGGAGATCAATGAGGAAGGCACAG...CATTCTTCCTCCCTTTGGACATATAACCACCAATCTTCTCTCTGTCTCTGTAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006391.5 ENSMUST00000063191.14 |
||
| CDS-3UTR TCA 90 bp | CAAGAAGAAAGTGTCTTCATCTTAGAACATGACTTCCCCCTACTTGCCCATCTTCTGTGCCTTCCTCATTaGTCTCCACTACACTCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: QEESVFILEHDFPLLAHLLCLPH*SPLHSG Trigger: ACCAGAGTGTAGTGGAGATCAATGAGGAAGGCACAG...AAGATGGGCAAGTAGGGGGAAGTCATGTTCTAAGATGAAGACACTTTCTTCTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006391.5 ENSMUST00000063191.14 |
||
| CDS-3UTR CCA 90 bp | AAGGAATCACATCAGGCTCCAACACCACACCACATATGGAATTTAATTCAAACTGTCCACACCCTCATCTaGGAGCAGAACCACCAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: KESHQAPTPHHIWNLIQTVHTLI*EQNHQA Trigger: AGCTTGGTGGTTCTGCTCCCAGATGAGGGTGTGGAC...AGTTTGAATTAAATTCCATATGTGGTGTGGTGTTGGAGCCTGATGTGATTCCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006391.5 ENSMUST00000063191.14 |
||
| 3UTR CAA 72 bp | TTGTGCATCATGCTCATGGTGAGGTCAGAGGACAACTaGCTAGAGTCAGTTTTCTTCTTCCACCATGTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LCIMLMVRSEDN*LESVFFFHHVC Trigger: ACAGACATGGTGGAAGAAGAAAACTGACTCTAGCAAGTTGTCCTCTGACCTCACCATGAGCATGATGCACAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006391.5 ENSMUST00000063191.14 |
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| CDS-3UTR TCA 90 bp | CAAGAAGAAAGTGTCTTCATCTTAGAACATGACTTCCCCCTACTTGCCCATCTTAGCAACTGGAAACCCTaGTGGATGCCTTCCTCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: QEESVFILEHDFPLLAHLSNWKP*WMPSSL Trigger: TAAAGAGGAAGGCATCCATCAGGGTTTCCAGTTGCT...AAGATGGGCAAGTAGGGGGAAGTCATGTTCTAAGATGAAGACACTTTCTTCTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006391.5 ENSMUST00000063191.14 |
||
| CDS-3UTR TCA 90 bp | GGCTATAAATTACTGGCTAGGCTATCAATCAATAGCATAGCAGAAGGTATTTGGCACAGCAAAATTCTATaGTGGCAGAGGCTGCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: GYKLLARLSINSIAEGIWHSKIL*WQRLLQ Trigger: CTGCAGCAGCCTCTGCCATCATAGAATTTTGCTGTG...CCAAATACCTTCTGCTATGCTATTGATTGATAGCCTAGCCAGTAATTTATAGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006391.5 ENSMUST00000063191.14 |
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| CDS-3UTR TCA 90 bp | AAGGAATCACATCAGGCTCCAACACCACACCACATATGGAATTTAATTCAAACTAGCAACTGGAAACCCTaGTGGATGCCTTCCTCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: KESHQAPTPHHIWNLIQTSNWKP*WMPSSL Trigger: TAAAGAGGAAGGCATCCATCAGGGTTTCCAGTTGCT...AGTTTGAATTAAATTCCATATGTGGTGTGGTGTTGGAGCCTGATGTGATTCCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006391.5 ENSMUST00000063191.14 |
||
| CDS-3UTR TCA 90 bp | CCTACCCCACTAGTTGTAACATTATTTTTCCTATTCATTGGTCATTACCTCATGCACAGCAAAATTCTATaGTGGCAGAGGCTGCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: PTPLVVTLFFLFIGHYLMHSKIL*WQRLLQ Trigger: CTGCAGCAGCCTCTGCCATCATAGAATTTTGCTGTG...CATGAGGTAATGACCAATGAATAGGAAAAATAATGTTACAACTAGTGGGGTAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000006391.5 ENSMUST00000063191.14 |
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| CDS-3UTR GCA 90 bp | CCTACCCCACTAGTTGTAACATTATTTTTCCTATTCATTGGTCATTACCTCATGTTGCCTGGACACCTCTaGTTCTTCAGCAAAGGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: PTPLVVTLFFLFIGHYLMLPGHL*FFSKGE Trigger: CTCTCCTTTGCTGAAGAAGCAGAGGTGTCCAGGCAA...CATGAGGTAATGACCAATGAATAGGAAAAATAATGTTACAACTAGTGGGGTAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000006391.5 ENSMUST00000063191.14 |
||
| CDS-3UTR GCA 90 bp | AAGGAATCACATCAGGCTCCAACACCACACCACATATGGAATTTAATTCAAACTTCACGACACATCATCTaGACTGGCCTTTTCTCATCC | + |
|
Preference number: 4 (lower is better) Translates to: KESHQAPTPHHIWNLIQTSRHII*TGLFSS Trigger: GGATGAGAAAAGGCCAGTGCAGATGATGTGTCGTGA...AGTTTGAATTAAATTCCATATGTGGTGTGGTGTTGGAGCCTGATGTGATTCCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006391.5 ENSMUST00000063191.14 |
||
| CDS-3UTR GCA 90 bp | GGCTATAAATTACTGGCTAGGCTATCAATCAATAGCATAGCAGAAGGTATTTGGTGCCACAGAACAGGATaGTGTTTGCTTTGTTGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: GYKLLARLSINSIAEGIWCHRTG*CLLCCA Trigger: GGCACAACAAAGCAAACAGCATCCTGTTCTGTGGCA...CCAAATACCTTCTGCTATGCTATTGATTGATAGCCTAGCCAGTAATTTATAGCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006391.5 ENSMUST00000063191.14 |
||
| CDS-3UTR TCA 90 bp | CCTACCCCACTAGTTGTAACATTATTTTTCCTATTCATTGGTCATTACCTCATGGAGCTGCTCCATCTCTaGGTCATAGAAGTGAAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: PTPLVVTLFFLFIGHYLMELLHL*VIEVKR Trigger: TCTCTTCACTTCTATGACTCAGAGATGGAGCAGCTC...CATGAGGTAATGACCAATGAATAGGAAAAATAATGTTACAACTAGTGGGGTAGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000006391.5 ENSMUST00000063191.14 |
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| CDS-3UTR GCA 90 bp | CCTACCCCACTAGTTGTAACATTATTTTTCCTATTCATTGGTCATTACCTCATGTCACGACACATCATCTaGACTGGCCTTTTCTCATCC | + |
|
Preference number: 4 (lower is better) Translates to: PTPLVVTLFFLFIGHYLMSRHII*TGLFSS Trigger: GGATGAGAAAAGGCCAGTGCAGATGATGTGTCGTGA...CATGAGGTAATGACCAATGAATAGGAAAAATAATGTTACAACTAGTGGGGTAGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000006391.5 ENSMUST00000063191.14 |
||
| CDS-3UTR GCA 90 bp | AAGGAATCACATCAGGCTCCAACACCACACCACATATGGAATTTAATTCAAACTGGAAACCCTGATGGATaGCTTCCTCTTTATTCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: KESHQAPTPHHIWNLIQTGNPDG*LPLYSN Trigger: GTTTGAATAAAGAGGAAGGCATCCATCAGGGTTTCC...AGTTTGAATTAAATTCCATATGTGGTGTGGTGTTGGAGCCTGATGTGATTCCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006391.5 ENSMUST00000063191.14 |
||
| CDS-3UTR GCA 90 bp | AACACCACACCACATATGGAATTTAATTCAAACTGGAACAGTGACCTAGATATATGCCACAGAACAGGATaGTGTTTGCTTTGTTGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: NTTPHMEFNSNWNSDLDICHRTG*CLLCCA Trigger: GGCACAACAAAGCAAACAGCATCCTGTTCTGTGGCA...TATATCTAGGTCACTGTTCCAGTTTGAATTAAATTCCATATGTGGTGTGGTGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006391.5 ENSMUST00000063191.14 |
||
| CDS-3UTR CCA 90 bp | TTCTTAATTGAGGCTCTTTCCTCTCCAGTGACTCTACCTTGTATCACATTAATAAGAGTACTTTCTGTCTaGCTTGTTCAGCTTCCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: FLIEALSSPVTLPCITLIRVLSV*LVQLPE Trigger: CTCAGGAAGCTGAACAAGCCAGACAGAAAGTACTCT...TATTAATGTGATACAAGGTAGAGTCACTGGAGAGGAAAGAGCCTCAATTAAGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006391.5 ENSMUST00000063191.14 |
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| 3UTR CAA 72 bp | GTCACTGTCTTTTTGTGGACTTCAGTAATGACATCATaGGGATATGTCCTCAAATTGAACCTTCTGGAAACC | + |
|
Preference number: 4 (lower is better) Translates to: VTVFLWTSVMTS*GYVLKLNLLET Trigger: GGTTTCCAGAAGGTTCAATTTGAGGACATATCCCAATGATGTCATTACTGAAGTCCACAAAAAGACAGTGAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006391.5 ENSMUST00000063191.14 |
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| CDS-3UTR CCA 90 bp | GGCTATAAATTACTGGCTAGGCTATCAATCAATAGCATAGCAGAAGGTATTTGGAGCATCTTCAAAAGATaGATGGCAAAGGTGCCATTT | + |
|
Preference number: 4 (lower is better) Translates to: GYKLLARLSINSIAEGIWSIFKR*MAKVPF Trigger: AAATGGCACCTTTGCCATCCATCTTTTGAAGATGCT...CCAAATACCTTCTGCTATGCTATTGATTGATAGCCTAGCCAGTAATTTATAGCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006391.5 ENSMUST00000063191.14 |
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| CDS-3UTR CCA 90 bp | TTCTTAATTGAGGCTCTTTCCTCTCCAGTGACTCTACCTTGTATCACATTAATATCTGGTGAACAAACTTaGACACACACAGGTTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: FLIEALSSPVTLPCITLISGEQT*THTGFS Trigger: AGAGAAACCTGTGTGTGTCCAAGTTTGTTCACCAGA...TATTAATGTGATACAAGGTAGAGTCACTGGAGAGGAAAGAGCCTCAATTAAGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006391.5 ENSMUST00000063191.14 |
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| 3UTR CAA 72 bp | ACTTCAGTAATGACATCATTGGGATATGTCCTCAAATaGAACCTTCTGGAAACCAGGACACATGTTGATGTA | + |
|
Preference number: 4 (lower is better) Translates to: TSVMTSLGYVLK*NLLETRTHVDV Trigger: TACATCAACATGTGTCCTGGTTTCCAGAAGGTTCAATTTGAGGACATATCCCAATGATGTCATTACTGAAGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006391.5 ENSMUST00000063191.14 |
||
| CDS-3UTR TCA 90 bp | TTCTTAATTGAGGCTCTTTCCTCTCCAGTGACTCTACCTTGTATCACATTAATATTGGAAGGGTTGCTTTaGCATAGCATCTTCAAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: FLIEALSSPVTLPCITLILEGLL*HSIFKR Trigger: TCTTTTGAAGATGCTATGTCAAAGCAACCCTTCCAA...TATTAATGTGATACAAGGTAGAGTCACTGGAGAGGAAAGAGCCTCAATTAAGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006391.5 ENSMUST00000063191.14 |
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| CDS-3UTR TCA 90 bp | CCTACCCCACTAGTTGTAACATTATTTTTCCTATTCATTGGTCATTACCTCATGTTGGAAGGGTTGCTTTaGCATAGCATCTTCAAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: PTPLVVTLFFLFIGHYLMLEGLL*HSIFKR Trigger: TCTTTTGAAGATGCTATGTCAAAGCAACCCTTCCAA...CATGAGGTAATGACCAATGAATAGGAAAAATAATGTTACAACTAGTGGGGTAGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000006391.5 ENSMUST00000063191.14 |
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| CDS-3UTR CCA 90 bp | CCTACCCCACTAGTTGTAACATTATTTTTCCTATTCATTGGTCATTACCTCATGAGCATCTTCAAAAGATaGATGGCAAAGGTGCCATTT | + |
|
Preference number: 4 (lower is better) Translates to: PTPLVVTLFFLFIGHYLMSIFKR*MAKVPF Trigger: AAATGGCACCTTTGCCATCCATCTTTTGAAGATGCT...CATGAGGTAATGACCAATGAATAGGAAAAATAATGTTACAACTAGTGGGGTAGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000006391.5 ENSMUST00000063191.14 |
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| CDS-3UTR CCA 90 bp | GGCTATAAATTACTGGCTAGGCTATCAATCAATAGCATAGCAGAAGGTATTTGGTACCTTCAGTTTGTTTaGAGACCCATGTGTTTATGT | + |
|
Preference number: 4 (lower is better) Translates to: GYKLLARLSINSIAEGIWYLQFV*RPMCLC Trigger: ACATAAACACATGGGTCTCCAAACAAACTGAAGGTA...CCAAATACCTTCTGCTATGCTATTGATTGATAGCCTAGCCAGTAATTTATAGCC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006391.5 ENSMUST00000063191.14 |
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| CDS-3UTR CCA 90 bp | TTAATGTTCAATATATGTACTGAGGAACTTCTATCCTACCCCACTAGTTGTAACTCTGGTGAACAAACTTaGACACACACAGGTTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LMFNICTEELLSYPTSCNSGEQT*THTGFS Trigger: AGAGAAACCTGTGTGTGTCCAAGTTTGTTCACCAGA...GTTACAACTAGTGGGGTAGGATAGAAGTTCCTCAGTACATATATTGAACATTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006391.5 ENSMUST00000063191.14 |
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| CDS-3UTR GCA 90 bp | AACACCACACCACATATGGAATTTAATTCAAACTGGAACAGTGACCTAGATATATTTATTCAAACCAAGTaGCTGAGATATCTGGACTGC | + |
|
Preference number: 4 (lower is better) Translates to: NTTPHMEFNSNWNSDLDIFIQTK*LRYLDC Trigger: GCAGTCCAGATATCTCAGGCACTTGGTTTGAATAAA...TATATCTAGGTCACTGTTCCAGTTTGAATTAAATTCCATATGTGGTGTGGTGTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006391.5 ENSMUST00000063191.14 |
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| CDS-3UTR GCA 90 bp | TTAATGTTCAATATATGTACTGAGGAACTTCTATCCTACCCCACTAGTTGTAACTTTATTCAAACCAAGTaGCTGAGATATCTGGACTGC | + |
|
Preference number: 4 (lower is better) Translates to: LMFNICTEELLSYPTSCNFIQTK*LRYLDC Trigger: GCAGTCCAGATATCTCAGGCACTTGGTTTGAATAAA...GTTACAACTAGTGGGGTAGGATAGAAGTTCCTCAGTACATATATTGAACATTAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006391.5 ENSMUST00000063191.14 |
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| CDS-3UTR CCA 90 bp | AACACCACACCACATATGGAATTTAATTCAAACTGGAACAGTGACCTAGATATAGACTCCTTAAAGGTTTaGAGGACTTCACAAGTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: NTTPHMEFNSNWNSDLDIDSLKV*RTSQVL Trigger: CAAAACTTGTGAAGTCCTCCAAACCTTTAAGGAGTC...TATATCTAGGTCACTGTTCCAGTTTGAATTAAATTCCATATGTGGTGTGGTGTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006391.5 ENSMUST00000063191.14 |
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| CDS-3UTR CCA 90 bp | CCTACCCCACTAGTTGTAACATTATTTTTCCTATTCATTGGTCATTACCTCATGTACCTTCAGTTTGTTTaGAGACCCATGTGTTTATGT | + |
|
Preference number: 4 (lower is better) Translates to: PTPLVVTLFFLFIGHYLMYLQFV*RPMCLC Trigger: ACATAAACACATGGGTCTCCAAACAAACTGAAGGTA...CATGAGGTAATGACCAATGAATAGGAAAAATAATGTTACAACTAGTGGGGTAGG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000006391.5 ENSMUST00000063191.14 |
||
| 3UTR CAA 72 bp | ATAAATATGGCTACAGAGATCATAGTCACTGTCTTTTaGTGGACTTCAGTAATGACATCATTGGGATATGTC | + |
|
Preference number: 4 (lower is better) Translates to: INMATEIIVTVF*WTSVMTSLGYV Trigger: GACATATCCCAATGATGTCATTACTGAAGTCCACAAAAAGACAGTGACTATGATCTCTGTAGCCATATTTAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006391.5 ENSMUST00000063191.14 |
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| CDS CCA 90 bp | CTCATCTGGGAGCAGAACCACCAAGCTCAGCTCCATTCCTTCATATaGCATCACCAGCACTTGCGCCTGCACCTCCTTCACATAGGCGAG | + |
|
Preference number: 5 (lower is better) Translates to: LIWEQNHQAQLHSFI*HHQHLRLHLLHIGE Trigger: CTCGCCTATGTGAAGGAGGTGCAGGCGCAAGTGCTGGTGATGCCATATGAAGGAATGGAGCTGAGCTTGGTGGTTCTGCTCCCAGATGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006391.5 ENSMUST00000063191.14 |
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| CDS TCA 90 bp | CCTGGACACCTCTGCTTCTTCAGCAAAGGAGAGCTGCTCCATCTCTaGGTCATAGAAGTGAAGAGAGGACTCCTTAAAGGTTTGGAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: PGHLCFFSKGELLHL*VIEVKRGLLKGLED Trigger: GTCCTCCAAACCTTTAAGGAGTCCTCTCTTCACTTCTATGACTCAGAGATGGAGCAGCTCTCCTTTGCTGAAGAAGCAGAGGTGTCCAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006391.5 ENSMUST00000063191.14 |
||
| CDS GCA 90 bp | CAACTGGAAACCCTGATGGATGCCTTCCTCTTTATTCAAACCAAGTaGCTGAGATATCTGGACTGCCGTCTGTCCCTTTGCACCCAAGAG | + |
|
Preference number: 5 (lower is better) Translates to: QLETLMDAFLFIQTK*LRYLDCRLSLCTQE Trigger: CTCTTGGGTGCAAAGGGACAGACGGCAGTCCAGATATCTCAGGCACTTGGTTTGAATAAAGAGGAAGGCATCCATCAGGGTTTCCAGTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006391.5 ENSMUST00000063191.14 |
||
| CDS-3UTR CAA 90 bp | GCTACAGAGACAGAGAGAAGATTGGTGGTTATATGTCCAAAGGGAGGAAGAATGGGTCAGCACAGAATGTaGGGACAGAAGAGGCACAGC | + |
|
Preference number: 5 (lower is better) Translates to: ATETERRLVVICPKGGRMGQHRM*GQKRHS Trigger: GCTGTGCCTCTTCTGTCCCAACATTCTGTGCTGACC...CATTCTTCCTCCCTTTGGACATATAACCACCAATCTTCTCTCTGTCTCTGTAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006391.5 ENSMUST00000063191.14 |
||
| CDS-3UTR CAA 90 bp | CCAGAGGTTGTAAGCAGCCATGTGAGTGGTGGGAAATGTCCCTGTGTCCTCTGCAATTTTACCTTCAGTTaGTTTGGAGACCCATGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: PEVVSSHVSGGKCPCVLCNFTFS*FGDPCV Trigger: AACACATGGGTCTCCAAACAAACTGAAGGTAAAATT...GCAGAGGACACAGGGACATTTCCCACCACTCACATGGCTGCTTACAACCTCTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006391.5 ENSMUST00000063191.14 |
||
| CDS-3UTR CAA 90 bp | CCAGAGGTTGTAAGCAGCCATGTGAGTGGTGGGAAATGTCCCTGTGTCCTCTGCTTAAAATATAAGGCATaGATGAGAACCAGCCTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: PEVVSSHVSGGKCPCVLCLKYKA*MRTSLV Trigger: AACCAGGCTGGTTCTCATCAATGCCTTATATTTTAA...GCAGAGGACACAGGGACATTTCCCACCACTCACATGGCTGCTTACAACCTCTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006391.5 ENSMUST00000063191.14 |
||
| CDS-3UTR CAA 90 bp | GACTTCCCCCTACTTGCCCATCTTGACAGAGCTGTAGGAGTGGTAGGGATACTGGGCCTTTTCTCATCCTaGTTTATTTTAAAGGGCATG | + |
|
Preference number: 5 (lower is better) Translates to: DFPLLAHLDRAVGVVGILGLFSS*FILKGM Trigger: CATGCCCTTTAAAATAAACAAGGATGAGAAAAGGCC...CAGTATCCCTACCACTCCTACAGCTCTGTCAAGATGGGCAAGTAGGGGGAAGTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000006391.5 ENSMUST00000063191.14 |
||
| CDS-3UTR CAA 90 bp | AAGGAATCACATCAGGCTCCAACACCACACCACATATGGAATTTAATTCAAACTTGGCATCACCAGCACTaGCGCCTGCACCTCCTTCAC | + |
|
Preference number: 5 (lower is better) Translates to: KESHQAPTPHHIWNLIQTWHHQH*RLHLLH Trigger: GTGAAGGAGGTGCAGGCGCAAGTGCTGGTGATGCCA...AGTTTGAATTAAATTCCATATGTGGTGTGGTGTTGGAGCCTGATGTGATTCCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006391.5 ENSMUST00000063191.14 |
||
| CDS-3UTR CAA 90 bp | CAAGAAGAAAGTGTCTTCATCTTAGAACATGACTTCCCCCTACTTGCCCATCTTGTCAGCCTTGTCCTCTaGGAAGACATCCACCACTCC | + |
|
Preference number: 5 (lower is better) Translates to: QEESVFILEHDFPLLAHLVSLVL*EDIHHS Trigger: GGAGTGGTGGATGTCTTCCAAGAGGACAAGGCTGAC...AAGATGGGCAAGTAGGGGGAAGTCATGTTCTAAGATGAAGACACTTTCTTCTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006391.5 ENSMUST00000063191.14 |
||
| CDS-3UTR CAA 90 bp | CAAGAAGAAAGTGTCTTCATCTTAGAACATGACTTCCCCCTACTTGCCCATCTTGGTCAGCACAGAATGTaGGGACAGAAGAGGCACAGC | + |
|
Preference number: 5 (lower is better) Translates to: QEESVFILEHDFPLLAHLGQHRM*GQKRHS Trigger: GCTGTGCCTCTTCTGTCCCAACATTCTGTGCTGACC...AAGATGGGCAAGTAGGGGGAAGTCATGTTCTAAGATGAAGACACTTTCTTCTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006391.5 ENSMUST00000063191.14 |
||
| CDS GCA 90 bp | GGAATTTTACCTTCAGTTTGTTTGGAGACCCATGTGTTTATGTGTTaGCTGGACACCTCTGCTTCTTCAGCAAAGGAGAGCTGCTCCATC | + |
|
Preference number: 5 (lower is better) Translates to: GILPSVCLETHVFMC*LDTSASSAKESCSI Trigger: GATGGAGCAGCTCTCCTTTGCTGAAGAAGCAGAGGTGTCCAGGCAACACATAAACACATGGGTCTCCAAACAAACTGAAGGTAAAATTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006391.5 ENSMUST00000063191.14 |
||
| CDS-3UTR CAA 90 bp | GACTTCCCCCTACTTGCCCATCTTGACAGAGCTGTAGGAGTGGTAGGGATACTGAATTTTACCTTCAGTTaGTTTGGAGACCCATGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: DFPLLAHLDRAVGVVGILNFTFS*FGDPCV Trigger: AACACATGGGTCTCCAAACAAACTGAAGGTAAAATT...CAGTATCCCTACCACTCCTACAGCTCTGTCAAGATGGGCAAGTAGGGGGAAGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000006391.5 ENSMUST00000063191.14 |
||
| CDS-3UTR CAA 90 bp | GCTACAGAGACAGAGAGAAGATTGGTGGTTATATGTCCAAAGGGAGGAAGAATGTCTGTGCCTTCCTCATaGATCTCCACTACACTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: ATETERRLVVICPKGGRMSVPSS*ISTTLW Trigger: CCAGAGTGTAGTGGAGATCAATGAGGAAGGCACAGA...CATTCTTCCTCCCTTTGGACATATAACCACCAATCTTCTCTCTGTCTCTGTAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006391.5 ENSMUST00000063191.14 |
||
| CDS-3UTR CAA 90 bp | TTAATGTTCAATATATGTACTGAGGAACTTCTATCCTACCCCACTAGTTGTAACTGGCATCACCAGCACTaGCGCCTGCACCTCCTTCAC | + |
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Preference number: 5 (lower is better) Translates to: LMFNICTEELLSYPTSCNWHHQH*RLHLLH Trigger: GTGAAGGAGGTGCAGGCGCAAGTGCTGGTGATGCCA...GTTACAACTAGTGGGGTAGGATAGAAGTTCCTCAGTACATATATTGAACATTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006391.5 ENSMUST00000063191.14 |
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| CDS-3UTR CAA 90 bp | AAGGAATCACATCAGGCTCCAACACCACACCACATATGGAATTTAATTCAAACTGTCAGCCTTGTCCTCTaGGAAGACATCCACCACTCC | + |
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Preference number: 5 (lower is better) Translates to: KESHQAPTPHHIWNLIQTVSLVL*EDIHHS Trigger: GGAGTGGTGGATGTCTTCCAAGAGGACAAGGCTGAC...AGTTTGAATTAAATTCCATATGTGGTGTGGTGTTGGAGCCTGATGTGATTCCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006391.5 ENSMUST00000063191.14 |
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| CDS-3UTR CAA 90 bp | CAAGAAGAAAGTGTCTTCATCTTAGAACATGACTTCCCCCTACTTGCCCATCTTTCTGTGCCTTCCTCATaGATCTCCACTACACTCTGG | + |
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Preference number: 5 (lower is better) Translates to: QEESVFILEHDFPLLAHLSVPSS*ISTTLW Trigger: CCAGAGTGTAGTGGAGATCAATGAGGAAGGCACAGA...AAGATGGGCAAGTAGGGGGAAGTCATGTTCTAAGATGAAGACACTTTCTTCTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006391.5 ENSMUST00000063191.14 |
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| CDS-3UTR CAA 90 bp | CAAGAAGAAAGTGTCTTCATCTTAGAACATGACTTCCCCCTACTTGCCCATCTTTACTTTCTGTCTGGCTaGTTCAGCTTCCTGAGAAGC | + |
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Preference number: 5 (lower is better) Translates to: QEESVFILEHDFPLLAHLYFLSG*FSFLRS Trigger: GCTTCTCAGGAAGCTGAACAAGCCAGACAGAAAGTA...AAGATGGGCAAGTAGGGGGAAGTCATGTTCTAAGATGAAGACACTTTCTTCTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006391.5 ENSMUST00000063191.14 |
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| CDS-3UTR CAA 90 bp | AAGGAATCACATCAGGCTCCAACACCACACCACATATGGAATTTAATTCAAACTAGATTGTTTTCCACCTaGCTGAGGTCCACACCCTCA | + |
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Preference number: 5 (lower is better) Translates to: KESHQAPTPHHIWNLIQTRLFST*LRSTPS Trigger: TGAGGGTGTGGACCTCAGCAAGGTGGAAAACAATCT...AGTTTGAATTAAATTCCATATGTGGTGTGGTGTTGGAGCCTGATGTGATTCCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006391.5 ENSMUST00000063191.14 |
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| CDS-3UTR CAA 90 bp | TTCTTAATTGAGGCTCTTTCCTCTCCAGTGACTCTACCTTGTATCACATTAATATCTGCAAAGAGCCTGTaGGCCACTCTAAGAGAGTAC | + |
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Preference number: 5 (lower is better) Translates to: FLIEALSSPVTLPCITLISAKSL*ATLREY Trigger: GTACTCTCTTAGAGTGGCCAACAGGCTCTTTGCAGA...TATTAATGTGATACAAGGTAGAGTCACTGGAGAGGAAAGAGCCTCAATTAAGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006391.5 ENSMUST00000063191.14 |
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| CDS-3UTR CAA 90 bp | CCTACCCCACTAGTTGTAACATTATTTTTCCTATTCATTGGTCATTACCTCATGAGATTGTTTTCCACCTaGCTGAGGTCCACACCCTCA | + |
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Preference number: 5 (lower is better) Translates to: PTPLVVTLFFLFIGHYLMRLFST*LRSTPS Trigger: TGAGGGTGTGGACCTCAGCAAGGTGGAAAACAATCT...CATGAGGTAATGACCAATGAATAGGAAAAATAATGTTACAACTAGTGGGGTAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000006391.5 ENSMUST00000063191.14 |
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| CDS-3UTR CAA 90 bp | AACACCACACCACATATGGAATTTAATTCAAACTGGAACAGTGACCTAGATATATCTGCAAAGAGCCTGTaGGCCACTCTAAGAGAGTAC | + |
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Preference number: 5 (lower is better) Translates to: NTTPHMEFNSNWNSDLDISAKSL*ATLREY Trigger: GTACTCTCTTAGAGTGGCCAACAGGCTCTTTGCAGA...TATATCTAGGTCACTGTTCCAGTTTGAATTAAATTCCATATGTGGTGTGGTGTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006391.5 ENSMUST00000063191.14 |
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| CDS-3UTR CAA 90 bp | TTAATGTTCAATATATGTACTGAGGAACTTCTATCCTACCCCACTAGTTGTAACCCATGTGTTTATGTGTaGCCTGGACACCTCTGCTTC | + |
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Preference number: 5 (lower is better) Translates to: LMFNICTEELLSYPTSCNPCVYV*PGHLCF Trigger: GAAGCAGAGGTGTCCAGGCAACACATAAACACATGG...GTTACAACTAGTGGGGTAGGATAGAAGTTCCTCAGTACATATATTGAACATTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006391.5 ENSMUST00000063191.14 |
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| CDS-3UTR CAA 90 bp | CAAGAAGAAAGTGTCTTCATCTTAGAACATGACTTCCCCCTACTTGCCCATCTTTTACCTTCAGTTTGTTaGGAGACCCATGTGTTTATG | + |
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Preference number: 5 (lower is better) Translates to: QEESVFILEHDFPLLAHLLPSVC*ETHVFM Trigger: CATAAACACATGGGTCTCCAAACAAACTGAAGGTAA...AAGATGGGCAAGTAGGGGGAAGTCATGTTCTAAGATGAAGACACTTTCTTCTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000006391.5 ENSMUST00000063191.14 |
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| CDS-3UTR CAA 90 bp | CAAGAAGAAAGTGTCTTCATCTTAGAACATGACTTCCCCCTACTTGCCCATCTTGGCCTTTTCTCATCCTaGTTTATTTTAAAGGGCATG | + |
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Preference number: 5 (lower is better) Translates to: QEESVFILEHDFPLLAHLGLFSS*FILKGM Trigger: CATGCCCTTTAAAATAAACAAGGATGAGAAAAGGCC...AAGATGGGCAAGTAGGGGGAAGTCATGTTCTAAGATGAAGACACTTTCTTCTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000006391.5 ENSMUST00000063191.14 |
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| CDS-3UTR CAA 90 bp | AACACCACACCACATATGGAATTTAATTCAAACTGGAACAGTGACCTAGATATATACTTTCTGTCTGGCTaGTTCAGCTTCCTGAGAAGC | + |
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Preference number: 5 (lower is better) Translates to: NTTPHMEFNSNWNSDLDIYFLSG*FSFLRS Trigger: GCTTCTCAGGAAGCTGAACAAGCCAGACAGAAAGTA...TATATCTAGGTCACTGTTCCAGTTTGAATTAAATTCCATATGTGGTGTGGTGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006391.5 ENSMUST00000063191.14 |
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| CDS-3UTR CAA 90 bp | AAGGAATCACATCAGGCTCCAACACCACACCACATATGGAATTTAATTCAAACTTTCTCAAAAGTGAGATaGTTTTCCACCTTGCTGAGG | + |
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Preference number: 5 (lower is better) Translates to: KESHQAPTPHHIWNLIQTFSKVR*FSTLLR Trigger: CCTCAGCAAGGTGGAAAACAATCTCACTTTTGAGAA...AGTTTGAATTAAATTCCATATGTGGTGTGGTGTTGGAGCCTGATGTGATTCCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006391.5 ENSMUST00000063191.14 |
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| CDS-3UTR CAA 90 bp | TTCTTAATTGAGGCTCTTTCCTCTCCAGTGACTCTACCTTGTATCACATTAATATTCTCAAAAGTGAGATaGTTTTCCACCTTGCTGAGG | + |
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Preference number: 5 (lower is better) Translates to: FLIEALSSPVTLPCITLIFSKVR*FSTLLR Trigger: CCTCAGCAAGGTGGAAAACAATCTCACTTTTGAGAA...TATTAATGTGATACAAGGTAGAGTCACTGGAGAGGAAAGAGCCTCAATTAAGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006391.5 ENSMUST00000063191.14 |
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| CDS-3UTR CAA 90 bp | AACACCACACCACATATGGAATTTAATTCAAACTGGAACAGTGACCTAGATATATTAAAATATAAGGCATaGATGAGAACCAGCCTGGTT | + |
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Preference number: 5 (lower is better) Translates to: NTTPHMEFNSNWNSDLDILKYKA*MRTSLV Trigger: AACCAGGCTGGTTCTCATCAATGCCTTATATTTTAA...TATATCTAGGTCACTGTTCCAGTTTGAATTAAATTCCATATGTGGTGTGGTGTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006391.5 ENSMUST00000063191.14 |
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| CDS CAA 72 bp | GCTCAGCTCCATTCCTTCATATGGCATCACCAGCACTaGCGCCTGCACCTCCTTCACATAGGCGAGGTTATA | + |
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Preference number: 6 (lower is better) Translates to: AQLHSFIWHHQH*RLHLLHIGEVI Trigger: TATAACCTCGCCTATGTGAAGGAGGTGCAGGCGCAAGTGCTGGTGATGCCATATGAAGGAATGGAGCTGAGC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006391.5 ENSMUST00000063191.14 |
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| CDS CAA 90 bp | AACCACCAAGCTCAGCTCCATTCCTTCATATGGCATCACCAGCACTaGCGCCTGCACCTCCTTCACATAGGCGAGGTTATATGTGTCTTC | + |
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Preference number: 6 (lower is better) Translates to: NHQAQLHSFIWHHQH*RLHLLHIGEVICVF Trigger: GAAGACACATATAACCTCGCCTATGTGAAGGAGGTGCAGGCGCAAGTGCTGGTGATGCCATATGAAGGAATGGAGCTGAGCTTGGTGGTT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006391.5 ENSMUST00000063191.14 |
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| CDS GCA 72 bp | ACCCTGATGGATGCCTTCCTCTTTATTCAAACCAAGTaGCTGAGATATCTGGACTGCCGTCTGTCCCTTTGC | + |
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Preference number: 6 (lower is better) Translates to: TLMDAFLFIQTK*LRYLDCRLSLC Trigger: GCAAAGGGACAGACGGCAGTCCAGATATCTCAGGCACTTGGTTTGAATAAAGAGGAAGGCATCCATCAGGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006391.5 ENSMUST00000063191.14 |
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| CDS GCA 72 bp | CTCTTTATTCAAACCAAGTGCCTGAGATATCTGGACTaGCGTCTGTCCCTTTGCACCCAAGAGAACCATAGC | + |
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Preference number: 6 (lower is better) Translates to: LFIQTKCLRYLD*RLSLCTQENHS Trigger: GCTATGGTTCTCTTGGGTGCAAAGGGACAGACGGCAGTCCAGATATCTCAGGCACTTGGTTTGAATAAAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006391.5 ENSMUST00000063191.14 |
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| CDS GCA 72 bp | CCTTCAGTTTGTTTGGAGACCCATGTGTTTATGTGTTaGCTGGACACCTCTGCTTCTTCAGCAAAGGAGAGC | + |
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Preference number: 6 (lower is better) Translates to: PSVCLETHVFMC*LDTSASSAKES Trigger: GCTCTCCTTTGCTGAAGAAGCAGAGGTGTCCAGGCAACACATAAACACATGGGTCTCCAAACAAACTGAAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006391.5 ENSMUST00000063191.14 |
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| CDS CAA 72 bp | ACCTTCAGTTTGTTTGGAGACCCATGTGTTTATGTGTaGCCTGGACACCTCTGCTTCTTCAGCAAAGGAGAG | + |
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Preference number: 6 (lower is better) Translates to: TFSLFGDPCVYV*PGHLCFFSKGE Trigger: CTCTCCTTTGCTGAAGAAGCAGAGGTGTCCAGGCAACACATAAACACATGGGTCTCCAAACAAACTGAAGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006391.5 ENSMUST00000063191.14 |
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| CDS CAA 90 bp | TGGAATTTTACCTTCAGTTTGTTTGGAGACCCATGTGTTTATGTGTaGCCTGGACACCTCTGCTTCTTCAGCAAAGGAGAGCTGCTCCAT | + |
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Preference number: 6 (lower is better) Translates to: WNFTFSLFGDPCVYV*PGHLCFFSKGELLH Trigger: ATGGAGCAGCTCTCCTTTGCTGAAGAAGCAGAGGTGTCCAGGCAACACATAAACACATGGGTCTCCAAACAAACTGAAGGTAAAATTCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006391.5 ENSMUST00000063191.14 |
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