Pregenerated sensors for SERPINB7 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000067001Ensembl transcript IDs: ENSMUST00000086690.6, ENSMUST00000154538.8
Found 50 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ACAGGCAGCCCCTGCATTCTCTTTGTGAGTGGATCAAACCCCAGATaGGTCAATAGTATTAGACAAAGGGAAGTAAATGGAGTAGAAATG | + |
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Preference number: 1 (lower is better) Translates to: TGSPCILFVSGSNPR*VNSIRQREVNGVEM Trigger: CATTTCTACTCCATTTACTTCCCTTTGTCTAATACTATTGACCCATCTGGGGTTTGATCCACTCACAAAGAGAATGCAGGGGCTGCCTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086690.6 |
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| 3UTR TCA 90 bp | TGGGCTTACTTTTTAGATTGTTGTATCATGAATCAGGAATGTCTCTaGAAACTCAGGAATTTAAATGTAAAAGTTTCTACAGGCAGCCCC | + |
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Preference number: 1 (lower is better) Translates to: WAYFLDCCIMNQECL*KLRNLNVKVSTGSP Trigger: GGGGCTGCCTGTAGAAACTTTTACATTTAAATTCCTGAGTTTTCAGAGACATTCCTGATTCATGATACAACAATCTAAAAAGTAAGCCCA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086690.6 |
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| 3UTR-3UTR TCA 90 bp | GAGCAGGCATTTAGACTATCAACCAGGTATCGAAAAGAGTTAAGTCACCAGTATACTTATGATGCTTCTTaGTGCCTGTTACTGTATAGG | + |
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Preference number: 2 (lower is better) Translates to: EQAFRLSTRYRKELSHQYTYDAS*CLLLYR Trigger: CCTATACAGTAACAGGCATCAAGAAGCATCATAAGT...ATACTGGTGACTTAACTCTTTTCGATACCTGGTTGATAGTCTAAATGCCTGCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086690.6 |
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| 3UTR-3UTR CCA 90 bp | ACAGTGATTGTGAAGTCAAGCATACTGAAGGAAATACTAGCATCATCTTGTTTCCATTCTCTTTGTGAGTaGATCAAACCCCAGATGGGT | + |
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Preference number: 2 (lower is better) Translates to: TVIVKSSILKEILASSCFHSLCE*IKPQMG Trigger: ACCCATCTGGGGTTTGATCCACTCACAAAGAGAATG...GAAACAAGATGATGCTAGTATTTCCTTCAGTATGCTTGACTTCACAATCACTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086690.6 |
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| 3UTR CAA 90 bp | GCCTTCATTCTGGTTTCTGAGAAACAAATGGGCTTACTTTTTAGATaGTTGTATCATGAATCAGGAATGTCTCTGAAAACTCAGGAATTT | + |
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Preference number: 2 (lower is better) Translates to: AFILVSEKQMGLLFR*LYHESGMSLKTQEF Trigger: AAATTCCTGAGTTTTCAGAGACATTCCTGATTCATGATACAACAATCTAAAAAGTAAGCCCATTTGTTTCTCAGAAACCAGAATGAAGGC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086690.6 |
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| 3UTR CCA 72 bp | CCCTGCATTCTCTTTGTGAGTGGATCAAACCCCAGATaGGTCAATAGTATTAGACAAAGGGAAGTAAATGGA | + |
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Preference number: 3 (lower is better) Translates to: PCILFVSGSNPR*VNSIRQREVNG Trigger: TCCATTTACTTCCCTTTGTCTAATACTATTGACCCATCTGGGGTTTGATCCACTCACAAAGAGAATGCAGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086690.6 |
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| CDS-3UTR TCA 90 bp | GTGAGTGGATCAAACCCCAGATGGGTCAATAGTATTAGACAAAGGGAAGTAAATAGGGGCGGTCGGCTCTaGACACTGTGGACTCAGGAA | + |
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Preference number: 4 (lower is better) Translates to: VSGSNPRWVNSIRQREVNRGGRL*TLWTQE Trigger: TTCCTGAGTCCACAGTGTTCAGAGCCGACCGCCCCT...ATTTACTTCCCTTTGTCTAATACTATTGACCCATCTGGGGTTTGATCCACTCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086690.6 |
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| CDS-3UTR CCA 90 bp | TACAGGCAGCCCCTGCATTCTCTTTGTGAGTGGATCAAACCCCAGATGGGTCAACAGAGAGATCTGCACTaGACTCATCAAAGATATCTT | + |
|
Preference number: 4 (lower is better) Translates to: YRQPLHSLCEWIKPQMGQQRDLH*THQRYL Trigger: AAGATATCTTTGATGAGTCCAGTGCAGATCTCTCTG...TTGACCCATCTGGGGTTTGATCCACTCACAAAGAGAATGCAGGGGCTGCCTGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086690.6 |
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| CDS-3UTR GCA 90 bp | GTATCATTTGCTGACCATCAATGCACTGAAACAAATCAAAGCAAACCCATGTATCAGCAGTGGCTTCAGTaGCCTCCTCTGAGACCTCTA | + |
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Preference number: 4 (lower is better) Translates to: VSFADHQCTETNQSKPMYQQWLQ*PPLRPL Trigger: TAGAGGTCTCAGAGGAGGGCACTGAAGCCACTGCTG...ATACATGGGTTTGCTTTGATTTGTTTCAGTGCATTGATGGTCAGCAAATGATAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086690.6 |
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| CDS-3UTR TCA 90 bp | GTGAGTGGATCAAACCCCAGATGGGTCAATAGTATTAGACAAAGGGAAGTAAATCGCCCAACACCTTCTTaGTCTTTCCATGTGTCTCAT | + |
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Preference number: 4 (lower is better) Translates to: VSGSNPRWVNSIRQREVNRPTPS*SFHVSH Trigger: ATGAGACACATGGAAAGATCAAGAAGGTGTTGGGCG...ATTTACTTCCCTTTGTCTAATACTATTGACCCATCTGGGGTTTGATCCACTCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086690.6 |
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| CDS-3UTR GCA 90 bp | GTGAGTGGATCAAACCCCAGATGGGTCAATAGTATTAGACAAAGGGAAGTAAATGTCGAAGCCAAATTCTaGATTTGCTGCAGCAAGGGA | + |
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Preference number: 4 (lower is better) Translates to: VSGSNPRWVNSIRQREVNVEAKF*ICCSKG Trigger: TCCCTTGCTGCAGCAAATGCAGAATTTGGCTTCGAC...ATTTACTTCCCTTTGTCTAATACTATTGACCCATCTGGGGTTTGATCCACTCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086690.6 |
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| CDS-3UTR TCA 90 bp | GAGCAGGCATTTAGACTATCAACCAGGTATCGAAAAGAGTTAAGTCACCAGTATCCTCTGAGACCTCTATaGATGACTTGTGCATTAGCT | + |
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Preference number: 4 (lower is better) Translates to: EQAFRLSTRYRKELSHQYPLRPL*MTCALA Trigger: AGCTAATGCACAAGTCATTCATAGAGGTCTCAGAGG...ATACTGGTGACTTAACTCTTTTCGATACCTGGTTGATAGTCTAAATGCCTGCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086690.6 |
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| CDS-3UTR GCA 90 bp | TCCCTGATTTTTACAGTGATTGTGAAGTCAAGCATACTGAAGGAAATACTAGCAGCCAAATTCTGCATTTaGTGCAGCAAGGGAGGCCAT | + |
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Preference number: 4 (lower is better) Translates to: SLIFTVIVKSSILKEILAAKFCI*CSKGGH Trigger: ATGGCCTCCCTTGCTGCAGCAAATGCAGAATTTGGC...TGCTAGTATTTCCTTCAGTATGCTTGACTTCACAATCACTGTAAAAATCAGGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086690.6 |
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| CDS-3UTR CCA 90 bp | ACAGTGATTGTGAAGTCAAGCATACTGAAGGAAATACTAGCATCATCTTGTTTCCTCAAGAACCTGCATTaGTGGCTGCTGAATGGTAGA | + |
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Preference number: 4 (lower is better) Translates to: TVIVKSSILKEILASSCFLKNLH*WLLNGR Trigger: TCTACCATTCAGCAGCCACCAATGCAGGTTCTTGAG...GAAACAAGATGATGCTAGTATTTCCTTCAGTATGCTTGACTTCACAATCACTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086690.6 |
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| CDS-3UTR TCA 90 bp | GCTGACCATCAATGCACTGAAACAAATCAAAGCAAACCCATGTATTTCCAATTACTCCAGTGGCAATGCTaGGTTCATAATCCTTATGAG | + |
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Preference number: 4 (lower is better) Translates to: ADHQCTETNQSKPMYFQLLQWQC*VHNPYE Trigger: CTCATAAGGATTATGAACTCAGCATTGCCACTGGAG...TAATTGGAAATACATGGGTTTGCTTTGATTTGTTTCAGTGCATTGATGGTCAGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086690.6 |
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| CDS-3UTR TCA 90 bp | AAGTCACCAGTATCATTTGCTGACCATCAATGCACTGAAACAAATCAAAGCAAAATGCTTATGCCACCATaGTATTGGAGCTCAAGAACC | + |
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Preference number: 4 (lower is better) Translates to: KSPVSFADHQCTETNQSKMLMPP*YWSSRT Trigger: GGTTCTTGAGCTCCAATATCATGGTGGCATAAGCAT...TTTGCTTTGATTTGTTTCAGTGCATTGATGGTCAGCAAATGATACTGGTGACTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086690.6 |
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| CDS-3UTR TCA 90 bp | CGAAAAGAGTTAAGTCACCAGTATCATTTGCTGACCATCAATGCACTGAAACAAAATTCTTCTCTATCTTaGACTGGGGGAGAAACACGT | + |
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Preference number: 4 (lower is better) Translates to: RKELSHQYHLLTINALKQNSSLS*TGGETR Trigger: ACGTGTTTCTCCCCCAGTTCAAGATAGAGAAGAATT...TTGTTTCAGTGCATTGATGGTCAGCAAATGATACTGGTGACTTAACTCTTTTCG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000086690.6 |
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| CDS-3UTR CCA 90 bp | GTGAGTGGATCAAACCCCAGATGGGTCAATAGTATTAGACAAAGGGAAGTAAATACATTTCCATTTCCTTaGCTACTATCCATCTCTCTG | + |
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Preference number: 4 (lower is better) Translates to: VSGSNPRWVNSIRQREVNTFPFP*LLSISL Trigger: CAGAGAGATGGATAGTAGCCAAGGAAATGGAAATGT...ATTTACTTCCCTTTGTCTAATACTATTGACCCATCTGGGGTTTGATCCACTCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086690.6 |
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| CDS-3UTR CCA 90 bp | GTGAGTGGATCAAACCCCAGATGGGTCAATAGTATTAGACAAAGGGAAGTAAATTCATTTTCCTCCTATTaGTCCAGTCCATCAGATTCT | + |
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Preference number: 4 (lower is better) Translates to: VSGSNPRWVNSIRQREVNSFSSY*SSPSDS Trigger: AGAATCTGATGGACTGGACCAATAGGAGGAAAATGA...ATTTACTTCCCTTTGTCTAATACTATTGACCCATCTGGGGTTTGATCCACTCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086690.6 |
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| CDS-3UTR CCA 90 bp | ACTCAGGAATTTAAATGTAAAAGTTTCTACAGGCAGCCCCTGCATTCTCTTTGTTTCTCTATCTTGAACTaGGGGAGAAACACGTTCACA | + |
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Preference number: 4 (lower is better) Translates to: TQEFKCKSFYRQPLHSLCFSILN*GRNTFT Trigger: TGTGAACGTGTTTCTCCCCCAGTTCAAGATAGAGAA...ACAAAGAGAATGCAGGGGCTGCCTGTAGAAACTTTTACATTTAAATTCCTGAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000086690.6 |
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| CDS-3UTR CCA 90 bp | ACAGTGATTGTGAAGTCAAGCATACTGAAGGAAATACTAGCATCATCTTGTTTCCAATGTTATTTTCTGTaGCAGCAGTGGCTTCAGTGC | + |
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Preference number: 4 (lower is better) Translates to: TVIVKSSILKEILASSCFQCYFL*QQWLQC Trigger: GCACTGAAGCCACTGCTGCCACAGAAAATAACATTG...GAAACAAGATGATGCTAGTATTTCCTTCAGTATGCTTGACTTCACAATCACTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086690.6 |
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| CDS-3UTR TCA 90 bp | ACTCAGGAATTTAAATGTAAAAGTTTCTACAGGCAGCCCCTGCATTCTCTTTGTATTTCCATTTGCCTTTaGAGTAAACAGCGTTCACCA | + |
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Preference number: 4 (lower is better) Translates to: TQEFKCKSFYRQPLHSLCISICL*SKQRSP Trigger: TGGTGAACGCTGTTTACTTCAAAGGCAAATGGAAAT...ACAAAGAGAATGCAGGGGCTGCCTGTAGAAACTTTTACATTTAAATTCCTGAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086690.6 |
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| CDS-3UTR TCA 90 bp | GAGCAGGCATTTAGACTATCAACCAGGTATCGAAAAGAGTTAAGTCACCAGTATAACACGTTCACATACTaGGATTTCATTTTCCTCCTA | + |
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Preference number: 4 (lower is better) Translates to: EQAFRLSTRYRKELSHQYNTFTY*DFIFLL Trigger: TAGGAGGAAAATGAAATCTCAGTATGTGAACGTGTT...ATACTGGTGACTTAACTCTTTTCGATACCTGGTTGATAGTCTAAATGCCTGCTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086690.6 |
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| CDS-3UTR GCA 90 bp | GAGCAGGCATTTAGACTATCAACCAGGTATCGAAAAGAGTTAAGTCACCAGTATGTCATAGACTTTTTCTaGAAAAACTCCAGTGGCAAT | + |
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Preference number: 4 (lower is better) Translates to: EQAFRLSTRYRKELSHQYVIDFF*KNSSGN Trigger: ATTGCCACTGGAGTTTTTGCAGAAAAAGTCTATGAC...ATACTGGTGACTTAACTCTTTTCGATACCTGGTTGATAGTCTAAATGCCTGCTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000086690.6 |
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| CDS-3UTR GCA 90 bp | GTGAGTGGATCAAACCCCAGATGGGTCAATAGTATTAGACAAAGGGAAGTAAATGTGGACTCAGGAAGCTaGTTTTCAACAATGTTATTT | + |
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Preference number: 4 (lower is better) Translates to: VSGSNPRWVNSIRQREVNVDSGS*FSTMLF Trigger: AAATAACATTGTTGAAAAGCAGCTTCCTGAGTCCAC...ATTTACTTCCCTTTGTCTAATACTATTGACCCATCTGGGGTTTGATCCACTCAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086690.6 |
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| CDS-3UTR TCA 90 bp | CGAAAAGAGTTAAGTCACCAGTATCATTTGCTGACCATCAATGCACTGAAACAACTTGTACATCATTTGTaGAGTCAACTCTTTCCACTT | + |
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Preference number: 4 (lower is better) Translates to: RKELSHQYHLLTINALKQLVHHL*SQLFPL Trigger: AAGTGGAAAGAGTTGACTTCACAAATGATGTACAAG...TTGTTTCAGTGCATTGATGGTCAGCAAATGATACTGGTGACTTAACTCTTTTCG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086690.6 |
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| CDS-3UTR TCA 90 bp | TTTCTCAAGAATGAGTTAGCCTTCATTCTGGTTTCTGAGAAACAAATGGGCTTATTGAACCGCCGTTCTTaGTGCATCATATTAACTACT | + |
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Preference number: 4 (lower is better) Translates to: FLKNELAFILVSEKQMGLLNRRS*CIILTT Trigger: AGTAGTTAATATGATGCATCAAGAACGGCGGTTCAA...TAAGCCCATTTGTTTCTCAGAAACCAGAATGAAGGCTAACTCATTCTTGAGAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086690.6 |
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| CDS-3UTR GCA 90 bp | TTGCTGACCATCAATGCACTGAAACAAATCAAAGCAAACCCATGTATTTCCAATAATTCCAGAGAGATCTaGACTGGACTCATCAAAGAT | + |
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Preference number: 4 (lower is better) Translates to: LLTINALKQIKANPCISNNSREI*TGLIKD Trigger: ATCTTTGATGAGTCCAGTGCAGATCTCTCTGGAATT...ATTGGAAATACATGGGTTTGCTTTGATTTGTTTCAGTGCATTGATGGTCAGCAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086690.6 |
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| CDS CCA 90 bp | CATGCTTATGCCACCATGATATTGGAGCTCAAGAACCTGCATTGGTaGCTGCTGAATGGTAGACAAATTGAACCGCCGTTCTTGATGCAT | + |
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Preference number: 5 (lower is better) Translates to: HAYATMILELKNLHW*LLNGRQIEPPFLMH Trigger: ATGCATCAAGAACGGCGGTTCAATTTGTCTACCATTCAGCAGCCACCAATGCAGGTTCTTGAGCTCCAATATCATGGTGGCATAAGCATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086690.6 |
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| CDS CCA 90 bp | GTACATGCTTATGCCACCATGATATTGGAGCTCAAGAACCTGCATTaGTGGCTGCTGAATGGTAGACAAATTGAACCGCCGTTCTTGATG | + |
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Preference number: 5 (lower is better) Translates to: VHAYATMILELKNLH*WLLNGRQIEPPFLM Trigger: CATCAAGAACGGCGGTTCAATTTGTCTACCATTCAGCAGCCACCAATGCAGGTTCTTGAGCTCCAATATCATGGTGGCATAAGCATGTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086690.6 |
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| CDS CCA 90 bp | ATACGTAGAGACGACCTCCAGAGGCAATTCCAGAGAGATCTGCACTaGACTCATCAAAGATATCTTTCAAGCCTAAGGATTTCAAGTGGT | + |
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Preference number: 5 (lower is better) Translates to: IRRDDLQRQFQRDLH*THQRYLSSLRISSG Trigger: ACCACTTGAAATCCTTAGGCTTGAAAGATATCTTTGATGAGTCCAGTGCAGATCTCTCTGGAATTGCCTCTGGAGGTCGTCTCTACGTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086690.6 |
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| CDS-3UTR CAA 90 bp | CGAAAAGAGTTAAGTCACCAGTATCATTTGCTGACCATCAATGCACTGAAACAAAGCCAAATTCTGCATTaGCTGCAGCAAGGGAGGCCA | + |
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Preference number: 5 (lower is better) Translates to: RKELSHQYHLLTINALKQSQILH*LQQGRP Trigger: TGGCCTCCCTTGCTGCAGCAAATGCAGAATTTGGCT...TTGTTTCAGTGCATTGATGGTCAGCAAATGATACTGGTGACTTAACTCTTTTCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086690.6 |
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| CDS-3UTR CAA 90 bp | GAGCAGGCATTTAGACTATCAACCAGGTATCGAAAAGAGTTAAGTCACCAGTATTCGCCCAACACCTTCTaGATCTTTCCATGTGTCTCA | + |
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Preference number: 5 (lower is better) Translates to: EQAFRLSTRYRKELSHQYSPNTF*IFPCVS Trigger: TGAGACACATGGAAAGATCAAGAAGGTGTTGGGCGA...ATACTGGTGACTTAACTCTTTTCGATACCTGGTTGATAGTCTAAATGCCTGCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086690.6 |
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| CDS TCA 90 bp | AAGAGAAGAATACATTTCCATTTCCTTGGCTACTATCCATCTCTCTaGATAAGTCGAAGCCAAATTCTGCATTTGCTGCAGCAAGGGAGG | + |
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Preference number: 5 (lower is better) Translates to: KRRIHFHFLGYYPSL*ISRSQILHLLQQGR Trigger: CCTCCCTTGCTGCAGCAAATGCAGAATTTGGCTTCGACTTATTCAGAGAGATGGATAGTAGCCAAGGAAATGGAAATGTATTCTTCTCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086690.6 ENSMUST00000154538.8 |
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| CDS-3UTR CAA 90 bp | GAGCAGGCATTTAGACTATCAACCAGGTATCGAAAAGAGTTAAGTCACCAGTATTACATTTCCATTTCCTaGGCTACTATCCATCTCTCT | + |
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Preference number: 5 (lower is better) Translates to: EQAFRLSTRYRKELSHQYYISIS*ATIHLS Trigger: AGAGAGATGGATAGTAGCCAAGGAAATGGAAATGTA...ATACTGGTGACTTAACTCTTTTCGATACCTGGTTGATAGTCTAAATGCCTGCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086690.6 |
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| CDS-3UTR CAA 90 bp | CGAAAAGAGTTAAGTCACCAGTATCATTTGCTGACCATCAATGCACTGAAACAACAAGGACAAGAGACTTaGCCAGTAAATAAGATGATG | + |
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Preference number: 5 (lower is better) Translates to: RKELSHQYHLLTINALKQQGQET*PVNKMM Trigger: CATCATCTTATTTACTGGCAAAGTCTCTTGTCCTTG...TTGTTTCAGTGCATTGATGGTCAGCAAATGATACTGGTGACTTAACTCTTTTCG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086690.6 |
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| CDS TCA 90 bp | TGCAAAAACTCCAGTGGCAATGCTGAGTTCATAATCCTTATGAGATaGGTTTATGTCAGCAAGAACTCTTTTCAATTGATACTGAAGTCC | + |
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Preference number: 5 (lower is better) Translates to: CKNSSGNAEFIILMR*VYVSKNSFQLILKS Trigger: GGACTTCAGTATCAATTGAAAAGAGTTCTTGCTGACATAAACTCATCTCATAAGGATTATGAACTCAGCATTGCCACTGGAGTTTTTGCA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086690.6 |
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| CDS TCA 90 bp | TATGAAAGTCATAGACTTTTTCTGCAAAAACTCCAGTGGCAATGCTaGGTTCATAATCCTTATGAGATGAGTTTATGTCAGCAAGAACTC | + |
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Preference number: 5 (lower is better) Translates to: YESHRLFLQKLQWQC*VHNPYEMSLCQQEL Trigger: GAGTTCTTGCTGACATAAACTCATCTCATAAGGATTATGAACTCAGCATTGCCACTGGAGTTTTTGCAGAAAAAGTCTATGACTTTCATA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000086690.6 |
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| CDS-3UTR CAA 90 bp | ACTGAAGGAAATACTAGCATCATCTTGTTTCTCAAGAATGAGTTAGCCTTCATTAAGAACTCTTTTCAATaGATACTGAAGTCCTGGCTG | + |
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Preference number: 5 (lower is better) Translates to: TEGNTSIILFLKNELAFIKNSFQ*ILKSWL Trigger: CAGCCAGGACTTCAGTATCAATTGAAAAGAGTTCTT...AATGAAGGCTAACTCATTCTTGAGAAACAAGATGATGCTAGTATTTCCTTCAGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086690.6 |
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| CDS-3UTR CAA 90 bp | AGTGATTGTGAAGTCAAGCATACTGAAGGAAATACTAGCATCATCTTGTTTCTCCTTTCCACTTTAGCATaGTATAAGTTTTCAGCACAC | + |
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Preference number: 5 (lower is better) Translates to: SDCEVKHTEGNTSIILFLLSTLA*YKFSAH Trigger: GTGTGCTGAAAACTTATACAATGCTAAAGTGGAAAG...GAGAAACAAGATGATGCTAGTATTTCCTTCAGTATGCTTGACTTCACAATCACT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086690.6 |
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| CDS-3UTR CAA 90 bp | AATGAGTTAGCCTTCATTCTGGTTTCTGAGAAACAAATGGGCTTACTTTTTAGAATGATGTCATTCTTCTaGATGACAAACAGAAAGGGG | + |
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Preference number: 5 (lower is better) Translates to: NELAFILVSEKQMGLLFRMMSFF*MTNRKG Trigger: CCCCTTTCTGTTTGTCATCAAGAAGAATGACATCAT...TCTAAAAAGTAAGCCCATTTGTTTCTCAGAAACCAGAATGAAGGCTAACTCATT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086690.6 |
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| CDS TCA 72 bp | TCCTCAGGCAGCATAATGTACATGCTTATGCCACCATaGTATTGGAGCTCAAGAACCTGCATTGGTGGCTGC | + |
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Preference number: 6 (lower is better) Translates to: SSGSIMYMLMPP*YWSSRTCIGGC Trigger: GCAGCCACCAATGCAGGTTCTTGAGCTCCAATATCATGGTGGCATAAGCATGTACATTATGCTGCCTGAGGA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086690.6 |
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| CDS TCA 72 bp | CAGCAGTGGCTTCAGTGCCCTCCTCTGAGACCTCTATaGATGACTTGTGCATTAGCTTTGATACGTAGAGAC | + |
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Preference number: 6 (lower is better) Translates to: QQWLQCPPLRPL*MTCALALIRRD Trigger: GTCTCTACGTATCAAAGCTAATGCACAAGTCATTCATAGAGGTCTCAGAGGAGGGCACTGAAGCCACTGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086690.6 |
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| CDS CCA 72 bp | TATGCCACCATGATATTGGAGCTCAAGAACCTGCATTaGTGGCTGCTGAATGGTAGACAAATTGAACCGCCG | + |
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Preference number: 6 (lower is better) Translates to: YATMILELKNLH*WLLNGRQIEPP Trigger: CGGCGGTTCAATTTGTCTACCATTCAGCAGCCACCAATGCAGGTTCTTGAGCTCCAATATCATGGTGGCATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086690.6 |
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| CDS CAA 72 bp | GCCGACGAGCTGAGGCTGCTGTCGCCCAACACCTTCTaGATCTTTCCATGTGTCTCATTTTCAATCCATTTA | + |
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Preference number: 6 (lower is better) Translates to: ADELRLLSPNTF*IFPCVSFSIHL Trigger: TAAATGGATTGAAAATGAGACACATGGAAAGATCAAGAAGGTGTTGGGCGACAGCAGCCTCAGCTCGTCGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086690.6 |
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| CDS CAA 90 bp | GCCATCCTCAGGCAGCATAATGTACATGCTTATGCCACCATGATATaGGAGCTCAAGAACCTGCATTGGTGGCTGCTGAATGGTAGACAA | + |
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Preference number: 6 (lower is better) Translates to: AILRQHNVHAYATMI*ELKNLHWWLLNGRQ Trigger: TTGTCTACCATTCAGCAGCCACCAATGCAGGTTCTTGAGCTCCAATATCATGGTGGCATAAGCATGTACATTATGCTGCCTGAGGATGGC 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086690.6 |
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| CDS CAA 90 bp | CTGCATTGGTGGCTGCTGAATGGTAGACAAATTGAACCGCCGTTCTaGATGCATCATATTAACTACTTTTCCAGGACACGTGGGAGACCT | + |
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Preference number: 6 (lower is better) Translates to: LHWWLLNGRQIEPPF*MHHINYFSRTRGRP Trigger: AGGTCTCCCACGTGTCCTGGAAAAGTAGTTAATATGATGCATCAAGAACGGCGGTTCAATTTGTCTACCATTCAGCAGCCACCAATGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086690.6 |
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| CDS CAA 90 bp | ACCATGACAGCCGACGAGCTGAGGCTGCTGTCGCCCAACACCTTCTaGATCTTTCCATGTGTCTCATTTTCAATCCATTTATTAATTTTA | + |
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Preference number: 6 (lower is better) Translates to: TMTADELRLLSPNTF*IFPCVSFSIHLLIL Trigger: TAAAATTAATAAATGGATTGAAAATGAGACACATGGAAAGATCAAGAAGGTGTTGGGCGACAGCAGCCTCAGCTCGTCGGCTGTCATGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086690.6 |
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| CDS CCA 72 bp | TTCATTTTCCTCCTATTGGTCCAGTCCATCAGATTCTaGAAACTCAGCTTGCTTTCAATTTCACATAGGCCA | + |
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Preference number: 6 (lower is better) Translates to: FIFLLLVQSIRF*KLSLLSISHRP Trigger: TGGCCTATGTGAAATTGAAAGCAAGCTGAGTTTCCAGAATCTGATGGACTGGACCAATAGGAGGAAAATGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086690.6 |
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| CDS TCA 72 bp | ATACATTTCCATTTCCTTGGCTACTATCCATCTCTCTaGATAAGTCGAAGCCAAATTCTGCATTTGCTGCAG | + |
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Preference number: 6 (lower is better) Translates to: IHFHFLGYYPSL*ISRSQILHLLQ Trigger: CTGCAGCAAATGCAGAATTTGGCTTCGACTTATTCAGAGAGATGGATAGTAGCCAAGGAAATGGAAATGTAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086690.6 ENSMUST00000154538.8 |
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