Pregenerated sensors for SERPINB6E (Mus musculus)
Ensembl gene IDs: ENSMUSG00000069248Ensembl transcript IDs: ENSMUST00000110275.8, ENSMUST00000145221.2
Found 53 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ACCCTTTATTTCATAACTGTCATTATATTTATGGATAAGGTCACTTaGGCCACAGGCAAACCACGGCCAGTAAGTAAAATACTGACAGGA | + |
|
Preference number: 1 (lower is better) Translates to: TLYFITVIIFMDKVT*ATGKPRPVSKILTG Trigger: TCCTGTCAGTATTTTACTTACTGGCCGTGGTTTGCCTGTGGCCCAAGTGACCTTATCCATAAATATAATGACAGTTATGAAATAAAGGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110275.8 |
||
| 3UTR CCA 72 bp | TTCATAACTGTCATTATATTTATGGATAAGGTCACTTaGGCCACAGGCAAACCACGGCCAGTAAGTAAAATA | + |
|
Preference number: 3 (lower is better) Translates to: FITVIIFMDKVT*ATGKPRPVSKI Trigger: TATTTTACTTACTGGCCGTGGTTTGCCTGTGGCCCAAGTGACCTTATCCATAAATATAATGACAGTTATGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110275.8 |
||
| CDS-3UTR TCA 90 bp | ACTTGGGCCACAGGCAAACCACGGCCAGTAAGTAAAATACTGACAGGAACACCCCCGCTGAGTCAGTGGTaGCCCCACTGTGACTATTTC | + |
|
Preference number: 4 (lower is better) Translates to: TWATGKPRPVSKILTGTPPLSQW*PHCDYF Trigger: GAAATAGTCACAGTGGGGTCACCACTGACTCAGCGG...GGGTGTTCCTGTCAGTATTTTACTTACTGGCCGTGGTTTGCCTGTGGCCCAAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000110275.8 |
||
| CDS-3UTR TCA 90 bp | ACTTGGGCCACAGGCAAACCACGGCCAGTAAGTAAAATACTGACAGGAACACCCGTGGTGACCCCACTGTaGCTATTTCAGTGGCAACTG | + |
|
Preference number: 4 (lower is better) Translates to: TWATGKPRPVSKILTGTPVVTPL*LFQWQL Trigger: CAGTTGCCACTGAAATAGTCACAGTGGGGTCACCAC...GGGTGTTCCTGTCAGTATTTTACTTACTGGCCGTGGTTTGCCTGTGGCCCAAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110275.8 |
||
| CDS-3UTR GCA 90 bp | GTCACTTGGGCCACAGGCAAACCACGGCCAGTAAGTAAAATACTGACAGGAACAAGTGACTGGAAGCCCTaGTGGACATCTGCACCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: VTWATGKPRPVSKILTGTSDWKP*WTSAPP Trigger: TGGAGGTGCAGATGTCCAGCAGGGCTTCCAGTCACT...TGTTCCTGTCAGTATTTTACTTACTGGCCGTGGTTTGCCTGTGGCCCAAGTGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110275.8 |
||
| CDS-3UTR CCA 90 bp | ATGGATAAGGTCACTTGGGCCACAGGCAAACCACGGCCAGTAAGTAAAATACTGGACTGGAAGCCCTGCTaGACATCTGCACCTCCATTG | + |
|
Preference number: 4 (lower is better) Translates to: MDKVTWATGKPRPVSKILDWKPC*TSAPPL Trigger: CAATGGAGGTGCAGATGTCCAGCAGGGCTTCCAGTC...CAGTATTTTACTTACTGGCCGTGGTTTGCCTGTGGCCCAAGTGACCTTATCCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110275.8 |
||
| CDS-3UTR GCA 90 bp | GTCACTTGGGCCACAGGCAAACCACGGCCAGTAAGTAAAATACTGACAGGAACACAGAAAAGTCTGCTCTaGTCTCCTCAAAGGCATCAG | + |
|
Preference number: 4 (lower is better) Translates to: VTWATGKPRPVSKILTGTQKSLL*SPQRHQ Trigger: CTGATGCCTTTGAGGAGAGCAGAGCAGACTTTTCTG...TGTTCCTGTCAGTATTTTACTTACTGGCCGTGGTTTGCCTGTGGCCCAAGTGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110275.8 |
||
| CDS-3UTR TCA 90 bp | GATAAGGTCACTTGGGCCACAGGCAAACCACGGCCAGTAAGTAAAATACTGACATGTGCTCTGACTTGGTaGACAAGAGACAGATACAGC | + |
|
Preference number: 4 (lower is better) Translates to: DKVTWATGKPRPVSKILTCALTW*TRDRYS Trigger: GCTGTATCTGTCTCTTGTTCACCAAGTCAGAGCACA...TGTCAGTATTTTACTTACTGGCCGTGGTTTGCCTGTGGCCCAAGTGACCTTATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110275.8 |
||
| CDS-3UTR TCA 90 bp | ACTTGGGCCACAGGCAAACCACGGCCAGTAAGTAAAATACTGACAGGAACACCCTTGCTCCCATTAAGATaGGAGCCAGAGATGAAAACA | + |
|
Preference number: 4 (lower is better) Translates to: TWATGKPRPVSKILTGTPLLPLR*EPEMKT Trigger: TGTTTTCATCTCTGGCTCTCATCTTAATGGGAGCAA...GGGTGTTCCTGTCAGTATTTTACTTACTGGCCGTGGTTTGCCTGTGGCCCAAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110275.8 |
||
| CDS-3UTR GCA 90 bp | ACTTGGGCCACAGGCAAACCACGGCCAGTAAGTAAAATACTGACAGGAACACCCGGTAAAAGTAGCATTTaGTTCCAGCAGAGAGTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: TWATGKPRPVSKILTGTPGKSSI*FQQRVH Trigger: ATGGACTCTCTGCTGGAAGCAAATGCTACTTTTACC...GGGTGTTCCTGTCAGTATTTTACTTACTGGCCGTGGTTTGCCTGTGGCCCAAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110275.8 |
||
| CDS-3UTR GCA 90 bp | ATATTTATGGATAAGGTCACTTGGGCCACAGGCAAACCACGGCCAGTAAGTAAAGCCCTGCTGGACATCTaGACCTCCATTGCTGCATTT | + |
|
Preference number: 4 (lower is better) Translates to: IFMDKVTWATGKPRPVSKALLDI*TSIAAF Trigger: AAATGCAGCAATGGAGGTGCAGATGTCCAGCAGGGC...TTTACTTACTGGCCGTGGTTTGCCTGTGGCCCAAGTGACCTTATCCATAAATAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110275.8 |
||
| CDS-3UTR TCA 90 bp | ATGGATAAGGTCACTTGGGCCACAGGCAAACCACGGCCAGTAAGTAAAATACTGTCTCCCACTTTCCTTTaGAGTAGGTGGCATTCACAA | + |
|
Preference number: 4 (lower is better) Translates to: MDKVTWATGKPRPVSKILSPTFL*SRWHSQ Trigger: TTGTGAATGCCACCTACTTCAAAGGAAAGTGGGAGA...CAGTATTTTACTTACTGGCCGTGGTTTGCCTGTGGCCCAAGTGACCTTATCCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110275.8 |
||
| CDS-3UTR CCA 90 bp | ATATTTATGGATAAGGTCACTTGGGCCACAGGCAAACCACGGCCAGTAAGTAAATCAGTGAGAAGTGACTaGAAGCCCTGCTGGACATCT | + |
|
Preference number: 4 (lower is better) Translates to: IFMDKVTWATGKPRPVSKSVRSD*KPCWTS Trigger: AGATGTCCAGCAGGGCTTCCAGTCACTTCTCACTGA...TTTACTTACTGGCCGTGGTTTGCCTGTGGCCCAAGTGACCTTATCCATAAATAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110275.8 |
||
| CDS-3UTR TCA 90 bp | TGGGCCACAGGCAAACCACGGCCAGTAAGTAAAATACTGACAGGAACACCCTTTTTTTATCACCTTGAATaGGGAAAAGGAATGGACGGT | + |
|
Preference number: 4 (lower is better) Translates to: WATGKPRPVSKILTGTPFFYHLE*GKGMDG Trigger: ACCGTCCATTCCTTTTCCTCATTCAAGGTGATAAAA...AAAGGGTGTTCCTGTCAGTATTTTACTTACTGGCCGTGGTTTGCCTGTGGCCCA 46% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000110275.8 |
||
| CDS-3UTR TCA 90 bp | GTCACTTGGGCCACAGGCAAACCACGGCCAGTAAGTAAAATACTGACAGGAACAGAGACAGCAACTCTCTaGTTACATCTTTTGTCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: VTWATGKPRPVSKILTGTETATL*LHLLSF Trigger: AAAAGACAAAAGATGTAATCAGAGAGTTGCTGTCTC...TGTTCCTGTCAGTATTTTACTTACTGGCCGTGGTTTGCCTGTGGCCCAAGTGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110275.8 |
||
| CDS-3UTR TCA 90 bp | ATGGATAAGGTCACTTGGGCCACAGGCAAACCACGGCCAGTAAGTAAAATACTGCTGTGCCTTCTTCATTaGCTTCCACAAAACTTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: MDKVTWATGKPRPVSKILLCLLH*LPQNFC Trigger: ACAAAAGTTTTGTGGAAGTCAATGAAGAAGGCACAG...CAGTATTTTACTTACTGGCCGTGGTTTGCCTGTGGCCCAAGTGACCTTATCCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000110275.8 |
||
| CDS-3UTR TCA 90 bp | TATTTCATAACTGTCATTATATTTATGGATAAGGTCACTTGGGCCACAGGCAAACACTTCAGTGAGAAGTaGCTGGAAGCCCTGCTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: YFITVIIFMDKVTWATGKHFSEK*LEALLD Trigger: GTCCAGCAGGGCTTCCAGTCACTTCTCACTGAAGTG...TTTGCCTGTGGCCCAAGTGACCTTATCCATAAATATAATGACAGTTATGAAATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110275.8 |
||
| CDS-3UTR GCA 90 bp | GTCATTATATTTATGGATAAGGTCACTTGGGCCACAGGCAAACCACGGCCAGTACTGCACCTCCATTGCTaGATTTATCCAAAGAAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: VIIFMDKVTWATGKPRPVLHLHC*IYPKKV Trigger: TACTTTCTTTGGATAAATGCAGCAATGGAGGTGCAG...TACTGGCCGTGGTTTGCCTGTGGCCCAAGTGACCTTATCCATAAATATAATGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110275.8 |
||
| CDS-3UTR GCA 90 bp | TTTATGGATAAGGTCACTTGGGCCACAGGCAAACCACGGCCAGTAAGTAAAATATCCTCTTTGTTAAACTaGTTCTCCCACTTTCCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: FMDKVTWATGKPRPVSKISSLLN*FSHFPL Trigger: CAAAGGAAAGTGGGAGAAGCAGTTTAACAAAGAGGA...TATTTTACTTACTGGCCGTGGTTTGCCTGTGGCCCAAGTGACCTTATCCATAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110275.8 |
||
| CDS-3UTR GCA 90 bp | ATGGATAAGGTCACTTGGGCCACAGGCAAACCACGGCCAGTAAGTAAAATACTGTCCACAAAACTTTTGTaGACAACATTGGACAGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: MDKVTWATGKPRPVSKILSTKLL*TTLDRN Trigger: ATTTCTGTCCAATGTTGTGCACAAAAGTTTTGTGGA...CAGTATTTTACTTACTGGCCGTGGTTTGCCTGTGGCCCAAGTGACCTTATCCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000110275.8 |
||
| CDS-3UTR GCA 90 bp | TATTTCATAACTGTCATTATATTTATGGATAAGGTCACTTGGGCCACAGGCAAACAAAGGCATCAGTCATaGCCAGCTTGCAGAGGACAT | + |
|
Preference number: 4 (lower is better) Translates to: YFITVIIFMDKVTWATGKQRHQS*PACRGH Trigger: ATGTCCTCTGCAAGCTGGGCATGACTGATGCCTTTG...TTTGCCTGTGGCCCAAGTGACCTTATCCATAAATATAATGACAGTTATGAAATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110275.8 |
||
| CDS-3UTR GCA 90 bp | TTTATGGATAAGGTCACTTGGGCCACAGGCAAACCACGGCCAGTAAGTAAAATAAGTAGATATCTCTTCTaGGTAGTAAGTTTTGAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: FMDKVTWATGKPRPVSKISRYLF*VVSFEG Trigger: ACCTTCAAAACTTACTACGCAGAAGAGATATCTACT...TATTTTACTTACTGGCCGTGGTTTGCCTGTGGCCCAAGTGACCTTATCCATAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110275.8 |
||
| CDS-3UTR TCA 90 bp | TTCATAACTGTCATTATATTTATGGATAAGGTCACTTGGGCCACAGGCAAACCATTGCTTTTATCACCTTaGATGAGGAAAAGGAATGGA | + |
|
Preference number: 4 (lower is better) Translates to: FITVIIFMDKVTWATGKPLLLSP*MRKRNG Trigger: TCCATTCCTTTTCCTCATTCAAGGTGATAAAAGCAA...TGGTTTGCCTGTGGCCCAAGTGACCTTATCCATAAATATAATGACAGTTATGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110275.8 |
||
| CDS-3UTR CCA 90 bp | TTCATAACTGTCATTATATTTATGGATAAGGTCACTTGGGCCACAGGCAAACCATTTTGTGCACAACATTaGACAGAAATAGGCCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: FITVIIFMDKVTWATGKPFCAQH*TEIGLS Trigger: AGAAAGGCCTATTTCTGTCCAATGTTGTGCACAAAA...TGGTTTGCCTGTGGCCCAAGTGACCTTATCCATAAATATAATGACAGTTATGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110275.8 |
||
| CDS-3UTR TCA 90 bp | TATTTCATAACTGTCATTATATTTATGGATAAGGTCACTTGGGCCACAGGCAAACAAAATTGTTATCACTaGAGATCTTGTTGGCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: YFITVIIFMDKVTWATGKQNCYH*RSCWLF Trigger: GAAGAGCCAACAAGATCTTCAGTGATAACAATTTTG...TTTGCCTGTGGCCCAAGTGACCTTATCCATAAATATAATGACAGTTATGAAATA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110275.8 |
||
| CDS-3UTR CAA 90 bp | GTCACTTGGGCCACAGGCAAACCACGGCCAGTAAGTAAAATACTGACAGGAACATCAGTCATGCCCAGCTaGCAGAGGACATCCTTCATG | + |
|
Preference number: 5 (lower is better) Translates to: VTWATGKPRPVSKILTGTSVMPS*QRTSFM Trigger: CATGAAGGATGTCCTCTGCAAGCTGGGCATGACTGA...TGTTCCTGTCAGTATTTTACTTACTGGCCGTGGTTTGCCTGTGGCCCAAGTGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110275.8 |
||
| CDS CCA 90 bp | GCAGAGGACATCCTTCATGTCATAGGTAGCCTCCAACTTAAACCGTaGGAGGAAAACCTGCACTTCTTCTTCTTCCATCTTGACAAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: AEDILHVIGSLQLKP*EENLHFFFFHLDKP Trigger: AGGCTTGTCAAGATGGAAGAAGAAGAAGTGCAGGTTTTCCTCCCACGGTTTAAGTTGGAGGCTACCTATGACATGAAGGATGTCCTCTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110275.8 |
||
| CDS-3UTR CAA 90 bp | GATAAGGTCACTTGGGCCACAGGCAAACCACGGCCAGTAAGTAAAATACTGACATCACTGAAGATCTTGTaGGCTCTTCTGAGCATGTGC | + |
|
Preference number: 5 (lower is better) Translates to: DKVTWATGKPRPVSKILTSLKIL*ALLSMC Trigger: GCACATGCTCAGAAGAGCCAACAAGATCTTCAGTGA...TGTCAGTATTTTACTTACTGGCCGTGGTTTGCCTGTGGCCCAAGTGACCTTATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110275.8 |
||
| CDS-3UTR CAA 90 bp | ATATTTATGGATAAGGTCACTTGGGCCACAGGCAAACCACGGCCAGTAAGTAAATCCCTGGTGTCCTCTTaGTTAAACTGCTTCTCCCAC | + |
|
Preference number: 5 (lower is better) Translates to: IFMDKVTWATGKPRPVSKSLVSS*LNCFSH Trigger: GTGGGAGAAGCAGTTTAACAAAGAGGACACCAGGGA...TTTACTTACTGGCCGTGGTTTGCCTGTGGCCCAAGTGACCTTATCCATAAATAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110275.8 |
||
| CDS TCA 90 bp | AGAACCGGCCAAGGAACAGAATCTCTTTGCTTTTATCACCTTGAATaGGGAAAAGGAATGGACGGTCAGCAATTAAGCACCGCTGAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: RTGQGTESLCFYHLE*GKGMDGQQLSTAES Trigger: TGACTCAGCGGTGCTTAATTGCTGACCGTCCATTCCTTTTCCTCATTCAAGGTGATAAAAGCAAAGAGATTCTGTTCCTTGGCCGGTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110275.8 |
||
| CDS-3UTR CAA 90 bp | ATGGATAAGGTCACTTGGGCCACAGGCAAACCACGGCCAGTAAGTAAAATACTGACATTGTGCTCTGACTaGGTGAACAAGAGACAGATA | + |
|
Preference number: 5 (lower is better) Translates to: MDKVTWATGKPRPVSKILTLCSD*VNKRQI Trigger: TATCTGTCTCTTGTTCACCAAGTCAGAGCACAATGT...CAGTATTTTACTTACTGGCCGTGGTTTGCCTGTGGCCCAAGTGACCTTATCCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110275.8 |
||
| CDS-3UTR CAA 90 bp | GATAAGGTCACTTGGGCCACAGGCAAACCACGGCCAGTAAGTAAAATACTGACAAGAAATAGGCCTTTCTaGGAAGATATTCCAGAAAAG | + |
|
Preference number: 5 (lower is better) Translates to: DKVTWATGKPRPVSKILTRNRPF*EDIPEK Trigger: CTTTTCTGGAATATCTTCCAAGAAAGGCCTATTTCT...TGTCAGTATTTTACTTACTGGCCGTGGTTTGCCTGTGGCCCAAGTGACCTTATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110275.8 |
||
| CDS-3UTR CAA 90 bp | ATGGATAAGGTCACTTGGGCCACAGGCAAACCACGGCCAGTAAGTAAAATACTGTTTGCTTTTATCACCTaGAATGAGGAAAAGGAATGG | + |
|
Preference number: 5 (lower is better) Translates to: MDKVTWATGKPRPVSKILFAFIT*NEEKEW Trigger: CCATTCCTTTTCCTCATTCAAGGTGATAAAAGCAAA...CAGTATTTTACTTACTGGCCGTGGTTTGCCTGTGGCCCAAGTGACCTTATCCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000110275.8 |
||
| CDS-3UTR CAA 90 bp | TTCATAACTGTCATTATATTTATGGATAAGGTCACTTGGGCCACAGGCAAACCATGCCCTGTGTCAGTCTaGTTCACTTCAGTGAGAAGT | + |
|
Preference number: 5 (lower is better) Translates to: FITVIIFMDKVTWATGKPCPVSV*FTSVRS Trigger: ACTTCTCACTGAAGTGAACAAGACTGACACAGGGCA...TGGTTTGCCTGTGGCCCAAGTGACCTTATCCATAAATATAATGACAGTTATGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110275.8 |
||
| CDS-3UTR CAA 90 bp | TTTATGGATAAGGTCACTTGGGCCACAGGCAAACCACGGCCAGTAAGTAAAATAGTTTTCTTCTCATTCTaGCTGACTTTGAAAGGCATC | + |
|
Preference number: 5 (lower is better) Translates to: FMDKVTWATGKPRPVSKIVFFSF*LTLKGI Trigger: GATGCCTTTCAAAGTCAGCAAGAATGAGAAGAAAAC...TATTTTACTTACTGGCCGTGGTTTGCCTGTGGCCCAAGTGACCTTATCCATAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110275.8 |
||
| CDS-3UTR CAA 90 bp | TTCATAACTGTCATTATATTTATGGATAAGGTCACTTGGGCCACAGGCAAACCACTTTTGTGCACAACATaGGACAGAAATAGGCCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: FITVIIFMDKVTWATGKPLLCTT*DRNRPF Trigger: GAAAGGCCTATTTCTGTCCAATGTTGTGCACAAAAG...TGGTTTGCCTGTGGCCCAAGTGACCTTATCCATAAATATAATGACAGTTATGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110275.8 |
||
| CDS CCA 90 bp | GTAAGATATTTGATTTTCCACCATACTCAGTTCAACTTGTTCATCTaGCAGCATGATGATCATGCTCAGCTCTTTGTCAGTATAAGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: VRYLIFHHTQFNLFI*QHDDHAQLFVSIRK Trigger: CTTCCTTATACTGACAAAGAGCTGAGCATGATCATCATGCTGCCAGATGAACAAGTTGAACTGAGTATGGTGGAAAATCAAATATCTTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110275.8 |
||
| CDS-3UTR CAA 90 bp | TTCATAACTGTCATTATATTTATGGATAAGGTCACTTGGGCCACAGGCAAACCAACTTCCACAAAACTTTaGTGCACAACATTGGACAGA | + |
|
Preference number: 5 (lower is better) Translates to: FITVIIFMDKVTWATGKPTSTKL*CTTLDR Trigger: TCTGTCCAATGTTGTGCACAAAAGTTTTGTGGAAGT...TGGTTTGCCTGTGGCCCAAGTGACCTTATCCATAAATATAATGACAGTTATGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110275.8 |
||
| CDS GCA 72 bp | ACATCTTTTGTCTTTTTGGCTACCCAGGCGTTGATGTaGTGTCGACACTGCTCCGGAGTACCCTTAAAGTCC | + |
|
Preference number: 6 (lower is better) Translates to: TSFVFLATQALM*CRHCSGVPLKS Trigger: GGACTTTAAGGGTACTCCGGAGCAGTGTCGACAGCACATCAACGCCTGGGTAGCCAAAAAGACAAAAGATGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110275.8 |
||
| CDS CAA 72 bp | CTGATTACATCTTTTGTCTTTTTGGCTACCCAGGCGTaGATGTGCTGTCGACACTGCTCCGGAGTACCCTTA | + |
|
Preference number: 6 (lower is better) Translates to: LITSFVFLATQA*MCCRHCSGVPL Trigger: TAAGGGTACTCCGGAGCAGTGTCGACAGCACATCAACGCCTGGGTAGCCAAAAAGACAAAAGATGTAATCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110275.8 |
||
| CDS CAA 90 bp | AGCAACTCTCTGATTACATCTTTTGTCTTTTTGGCTACCCAGGCGTaGATGTGCTGTCGACACTGCTCCGGAGTACCCTTAAAGTCCAAC | + |
|
Preference number: 6 (lower is better) Translates to: SNSLITSFVFLATQA*MCCRHCSGVPLKSN Trigger: GTTGGACTTTAAGGGTACTCCGGAGCAGTGTCGACAGCACATCAACGCCTGGGTAGCCAAAAAGACAAAAGATGTAATCAGAGAGTTGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110275.8 |
||
| CDS TCA 72 bp | TCTGGCTTGCAGTGGTTCCATTTGCTCCCATTAAGATaGGAGCCAGAGATGAAAACATGCTCGAGGATGAGA | + |
|
Preference number: 6 (lower is better) Translates to: SGLQWFHLLPLR*EPEMKTCSRMR Trigger: TCTCATCCTCGAGCATGTTTTCATCTCTGGCTCTCATCTTAATGGGAGCAAATGGAACCACTGCAAGCCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110275.8 |
||
| CDS GCA 72 bp | GTGACTGGAAGCCCTGCTGGACATCTGCACCTCCATTaGTGCATTTATCCAAAGAAAGTACCTGACTTATCT | + |
|
Preference number: 6 (lower is better) Translates to: VTGSPAGHLHLH*CIYPKKVPDLS Trigger: AGATAAGTCAGGTACTTTCTTTGGATAAATGCAGCAATGGAGGTGCAGATGTCCAGCAGGGCTTCCAGTCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110275.8 |
||
| CDS CAA 72 bp | AGAGACAGCAACTCTCTGATTACATCTTTTGTCTTTTaGGCTACCCAGGCGTTGATGTGCTGTCGACACTGC | + |
|
Preference number: 6 (lower is better) Translates to: RDSNSLITSFVF*ATQALMCCRHC Trigger: GCAGTGTCGACAGCACATCAACGCCTGGGTAGCCAAAAAGACAAAAGATGTAATCAGAGAGTTGCTGTCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110275.8 |
||
| CDS CCA 72 bp | ATCCTTCATGTCATAGGTAGCCTCCAACTTAAACCGTaGGAGGAAAACCTGCACTTCTTCTTCTTCCATCTT | + |
|
Preference number: 6 (lower is better) Translates to: ILHVIGSLQLKP*EENLHFFFFHL Trigger: AAGATGGAAGAAGAAGAAGTGCAGGTTTTCCTCCCACGGTTTAAGTTGGAGGCTACCTATGACATGAAGGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110275.8 |
||
| CDS CAA 72 bp | GATTCCATGATGTCAAAATTGTTATCACTGAAGATCTaGTTGGCTCTTCTGAGCATGTGCCCTGTGTCAGTC | + |
|
Preference number: 6 (lower is better) Translates to: DSMMSKLLSLKI*LALLSMCPVSV Trigger: GACTGACACAGGGCACATGCTCAGAAGAGCCAACAAGATCTTCAGTGATAACAATTTTGACATCATGGAATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110275.8 |
||
| CDS TCA 72 bp | CAAGGAACAGAATCTCTTTGCTTTTATCACCTTGAATaGGGAAAAGGAATGGACGGTCAGCAATTAAGCACC | + |
|
Preference number: 6 (lower is better) Translates to: QGTESLCFYHLE*GKGMDGQQLST Trigger: GGTGCTTAATTGCTGACCGTCCATTCCTTTTCCTCATTCAAGGTGATAAAAGCAAAGAGATTCTGTTCCTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110275.8 |
||
| CDS CAA 72 bp | GTAAGATATTTGATTTTCCACCATACTCAGTTCAACTaGTTCATCTGGCAGCATGATGATCATGCTCAGCTC | + |
|
Preference number: 6 (lower is better) Translates to: VRYLIFHHTQFN*FIWQHDDHAQL Trigger: GAGCTGAGCATGATCATCATGCTGCCAGATGAACAAGTTGAACTGAGTATGGTGGAAAATCAAATATCTTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110275.8 |
||
| CDS CAA 90 bp | TTAAAAGATTCCATGATGTCAAAATTGTTATCACTGAAGATCTTGTaGGCTCTTCTGAGCATGTGCCCTGTGTCAGTCTTGTTCACTTCA | + |
|
Preference number: 6 (lower is better) Translates to: LKDSMMSKLLSLKIL*ALLSMCPVSVLFTS Trigger: TGAAGTGAACAAGACTGACACAGGGCACATGCTCAGAAGAGCCAACAAGATCTTCAGTGATAACAATTTTGACATCATGGAATCTTTTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110275.8 |
||
| CDS CAA 90 bp | CATCTTGACAAGCCTCGTCCACTGAATAAGTTTCTTGTAAGATATTaGATTTTCCACCATACTCAGTTCAACTTGTTCATCTGGCAGCAT | + |
|
Preference number: 6 (lower is better) Translates to: HLDKPRPLNKFLVRY*IFHHTQFNLFIWQH Trigger: ATGCTGCCAGATGAACAAGTTGAACTGAGTATGGTGGAAAATCAAATATCTTACAAGAAACTTATTCAGTGGACGAGGCTTGTCAAGATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110275.8 |
||
| CDS TCA 72 bp | GCTTCCAGCAGAGAGTCCATGATGGTGTACCTAGAATaGAGGATTACAATAAGCATAATAAACACACAATCT | + |
|
Preference number: 6 (lower is better) Translates to: ASSRESMMVYLE*RITISIINTQS Trigger: AGATTGTGTGTTTATTATGCTTATTGTAATCCTTCATTCTAGGTACACCATCATGGACTCTCTGCTGGAAGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110275.8 ENSMUST00000145221.2 |
||
| CDS TCA 72 bp | TGTTTGAATTCACTGTATATAGAGACAGCAACTCTCTaGTTACATCTTTTGTCTTTTTGGCTACCCAGGCGT | + |
|
Preference number: 6 (lower is better) Translates to: CLNSLYIETATL*LHLLSFWLPRR Trigger: ACGCCTGGGTAGCCAAAAAGACAAAAGATGTAATCAGAGAGTTGCTGTCTCTATATACAGTGAATTCAAACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110275.8 |
||
| CDS CAA 72 bp | AAGCCTCGTCCACTGAATAAGTTTCTTGTAAGATATTaGATTTTCCACCATACTCAGTTCAACTTGTTCATC | + |
|
Preference number: 6 (lower is better) Translates to: KPRPLNKFLVRY*IFHHTQFNLFI Trigger: GATGAACAAGTTGAACTGAGTATGGTGGAAAATCAAATATCTTACAAGAAACTTATTCAGTGGACGAGGCTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110275.8 |
||