Pregenerated sensors for SERPINB6C (Mus musculus)
Ensembl gene IDs: ENSMUSG00000052180Ensembl transcript IDs: ENSMUST00000110273.9, ENSMUST00000172184.2, ENSMUST00000222216.2
Found 55 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 72 bp | TTCATAGCTGTCATTGCACTTATGGATAAGGTCACTTaGGTTTCAGGCAAACCACAGAGAAAGGATGAAATA | + |
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Preference number: 3 (lower is better) Translates to: FIAVIALMDKVT*VSGKPQRKDEI Trigger: TATTTCATCCTTTCTCTGTGGTTTGCCTGAAACCCAAGTGACCTTATCCATAAGTGCAATGACAGCTATGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110273.9 ENSMUST00000172184.2 |
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| CDS-3UTR TCA 90 bp | ATAGCTGTCATTGCACTTATGGATAAGGTCACTTGGGTTTCAGGCAAACCACAGTGGCTACCCAGGTGTTaGTGTGCTGTCGGGACTGCT | + |
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Preference number: 4 (lower is better) Translates to: IAVIALMDKVTWVSGKPQWLPRC*CAVGTA Trigger: AGCAGTCCCGACAGCACATCAACACCTGGGTAGCCA...CTGTGGTTTGCCTGAAACCCAAGTGACCTTATCCATAAGTGCAATGACAGCTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110273.9 ENSMUST00000172184.2 |
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| CDS-3UTR CCA 90 bp | GCTGTCATTGCACTTATGGATAAGGTCACTTGGGTTTCAGGCAAACCACAGAGAAACTGGAAGCCCTGGTaGACGTCTCCATCTTCACTG | + |
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Preference number: 4 (lower is better) Translates to: AVIALMDKVTWVSGKPQRNWKPW*TSPSSL Trigger: CAGTGAAGATGGAGACGTCCACCAGGGCTTCCAGTT...TCTCTGTGGTTTGCCTGAAACCCAAGTGACCTTATCCATAAGTGCAATGACAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110273.9 ENSMUST00000172184.2 |
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| CDS-3UTR TCA 90 bp | GCTGTCATTGCACTTATGGATAAGGTCACTTGGGTTTCAGGCAAACCACAGAGATCTTGTTCACTTCGCTaGGAAGTAACTGGAAGCCCT | + |
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Preference number: 4 (lower is better) Translates to: AVIALMDKVTWVSGKPQRSCSLR*EVTGSP Trigger: AGGGCTTCCAGTTACTTCTCAGCGAAGTGAACAAGA...TCTCTGTGGTTTGCCTGAAACCCAAGTGACCTTATCCATAAGTGCAATGACAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110273.9 ENSMUST00000172184.2 |
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| CDS-3UTR TCA 90 bp | TATTTCATAGCTGTCATTGCACTTATGGATAAGGTCACTTGGGTTTCAGGCAAATGGCTACCCAGGTGTTaGTGTGCTGTCGGGACTGCT | + |
|
Preference number: 4 (lower is better) Translates to: YFIAVIALMDKVTWVSGKWLPRC*CAVGTA Trigger: AGCAGTCCCGACAGCACATCAACACCTGGGTAGCCA...TTTGCCTGAAACCCAAGTGACCTTATCCATAAGTGCAATGACAGCTATGAAATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110273.9 ENSMUST00000172184.2 |
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| CDS-3UTR GCA 90 bp | GTCATTGCACTTATGGATAAGGTCACTTGGGTTTCAGGCAAACCACAGAGAAAGCAGAAAAGTCTGCTCTaGCCTCCTCAAAGGCATCAG | + |
|
Preference number: 4 (lower is better) Translates to: VIALMDKVTWVSGKPQRKQKSLL*PPQRHQ Trigger: CTGATGCCTTTGAGGAGGGCAGAGCAGACTTTTCTG...CTTTCTCTGTGGTTTGCCTGAAACCCAAGTGACCTTATCCATAAGTGCAATGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110273.9 ENSMUST00000172184.2 |
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| CDS-3UTR CCA 90 bp | ATGGATAAGGTCACTTGGGTTTCAGGCAAACCACAGAGAAAGGATGAAATACTGAACTGGAAGCCCTGGTaGACGTCTCCATCTTCACTG | + |
|
Preference number: 4 (lower is better) Translates to: MDKVTWVSGKPQRKDEILNWKPW*TSPSSL Trigger: CAGTGAAGATGGAGACGTCCACCAGGGCTTCCAGTT...CAGTATTTCATCCTTTCTCTGTGGTTTGCCTGAAACCCAAGTGACCTTATCCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110273.9 ENSMUST00000172184.2 |
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| CDS-3UTR CCA 90 bp | GCACTTATGGATAAGGTCACTTGGGTTTCAGGCAAACCACAGAGAAAGGATGAAAGTAACTGGAAGCCCTaGTGGACGTCTCCATCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: ALMDKVTWVSGKPQRKDESNWKP*WTSPSS Trigger: TGAAGATGGAGACGTCCACCAGGGCTTCCAGTTACT...TTCATCCTTTCTCTGTGGTTTGCCTGAAACCCAAGTGACCTTATCCATAAGTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110273.9 ENSMUST00000172184.2 |
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| CDS-3UTR CCA 90 bp | TTCATAGCTGTCATTGCACTTATGGATAAGGTCACTTGGGTTTCAGGCAAACCATCGCTGAGAAGTAACTaGAAGCCCTGGTGGACGTCT | + |
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Preference number: 4 (lower is better) Translates to: FIAVIALMDKVTWVSGKPSLRSN*KPWWTS Trigger: AGACGTCCACCAGGGCTTCCAGTTACTTCTCAGCGA...TGGTTTGCCTGAAACCCAAGTGACCTTATCCATAAGTGCAATGACAGCTATGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110273.9 ENSMUST00000172184.2 |
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| CDS-3UTR CCA 90 bp | ATAGCTGTCATTGCACTTATGGATAAGGTCACTTGGGTTTCAGGCAAACCACAGCTTGCTGACTTTGAATaGCATCTCCCTGGTGTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: IAVIALMDKVTWVSGKPQLADFE*HLPGVL Trigger: GAGGACACCAGGGAGATGCCATTCAAAGTCAGCAAG...CTGTGGTTTGCCTGAAACCCAAGTGACCTTATCCATAAGTGCAATGACAGCTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110273.9 ENSMUST00000172184.2 |
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| CDS-3UTR GCA 90 bp | ATAGCTGTCATTGCACTTATGGATAAGGTCACTTGGGTTTCAGGCAAACCACAGTATTCCAGAAAAGTCTaGTCTGCCCTCCTCAAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: IAVIALMDKVTWVSGKPQYSRKV*SALLKG Trigger: GCCTTTGAGGAGGGCAGAGCAGACTTTTCTGGAATA...CTGTGGTTTGCCTGAAACCCAAGTGACCTTATCCATAAGTGCAATGACAGCTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110273.9 ENSMUST00000172184.2 |
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| CDS-3UTR CCA 90 bp | GATAAGGTCACTTGGGTTTCAGGCAAACCACAGAGAAAGGATGAAATACTGACAAGTAACTGGAAGCCCTaGTGGACGTCTCCATCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: DKVTWVSGKPQRKDEILTSNWKP*WTSPSS Trigger: TGAAGATGGAGACGTCCACCAGGGCTTCCAGTTACT...TGTCAGTATTTCATCCTTTCTCTGTGGTTTGCCTGAAACCCAAGTGACCTTATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110273.9 ENSMUST00000172184.2 |
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| CDS-3UTR CCA 90 bp | TTCATAGCTGTCATTGCACTTATGGATAAGGTCACTTGGGTTTCAGGCAAACCACTTGCTGACTTTGAATaGCATCTCCCTGGTGTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: FIAVIALMDKVTWVSGKPLADFE*HLPGVL Trigger: GAGGACACCAGGGAGATGCCATTCAAAGTCAGCAAG...TGGTTTGCCTGAAACCCAAGTGACCTTATCCATAAGTGCAATGACAGCTATGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110273.9 ENSMUST00000172184.2 |
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| CDS-3UTR CCA 90 bp | GTCATTGCACTTATGGATAAGGTCACTTGGGTTTCAGGCAAACCACAGAGAAAGCTCCAGCTTAAACCATaGGAGGAAAACCTCCACCTT | + |
|
Preference number: 4 (lower is better) Translates to: VIALMDKVTWVSGKPQRKLQLKP*EENLHL Trigger: AAGGTGGAGGTTTTCCTCCCATGGTTTAAGCTGGAG...CTTTCTCTGTGGTTTGCCTGAAACCCAAGTGACCTTATCCATAAGTGCAATGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110273.9 ENSMUST00000172184.2 |
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| CDS-3UTR TCA 90 bp | GATAAGGTCACTTGGGTTTCAGGCAAACCACAGAGAAAGGATGAAATACTGACATCTTGTTCACTTCGCTaGGAAGTAACTGGAAGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: DKVTWVSGKPQRKDEILTSCSLR*EVTGSP Trigger: AGGGCTTCCAGTTACTTCTCAGCGAAGTGAACAAGA...TGTCAGTATTTCATCCTTTCTCTGTGGTTTGCCTGAAACCCAAGTGACCTTATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110273.9 ENSMUST00000172184.2 |
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| CDS-3UTR GCA 90 bp | TTCATAGCTGTCATTGCACTTATGGATAAGGTCACTTGGGTTTCAGGCAAACCACGTCTCCATCTTCACTaGTGCTGCATTTACCCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: FIAVIALMDKVTWVSGKPRLHLH*CCIYPK Trigger: CTTTGGGTAAATGCAGCAGCAGTGAAGATGGAGACG...TGGTTTGCCTGAAACCCAAGTGACCTTATCCATAAGTGCAATGACAGCTATGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110273.9 ENSMUST00000172184.2 |
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| CDS-3UTR GCA 90 bp | GATAAGGTCACTTGGGTTTCAGGCAAACCACAGAGAAAGGATGAAATACTGACACGTCTCCATCTTCACTaGTGCTGCATTTACCCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: DKVTWVSGKPQRKDEILTRLHLH*CCIYPK Trigger: CTTTGGGTAAATGCAGCAGCAGTGAAGATGGAGACG...TGTCAGTATTTCATCCTTTCTCTGTGGTTTGCCTGAAACCCAAGTGACCTTATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110273.9 ENSMUST00000172184.2 |
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| CDS-3UTR GCA 90 bp | GCTGTCATTGCACTTATGGATAAGGTCACTTGGGTTTCAGGCAAACCACAGAGATCATGTTCAGCTCATTaGCAACATAGGGAAGCAACA | + |
|
Preference number: 4 (lower is better) Translates to: AVIALMDKVTWVSGKPQRSCSAH*QHREAT Trigger: TGTTGCTTCCCTATGTTGGCAATGAGCTGAACATGA...TCTCTGTGGTTTGCCTGAAACCCAAGTGACCTTATCCATAAGTGCAATGACAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110273.9 ENSMUST00000172184.2 |
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| CDS-3UTR TCA 90 bp | GTCATTGCACTTATGGATAAGGTCACTTGGGTTTCAGGCAAACCACAGAGAAAGGATCAGTGGAGTGTTTaGATGTATTGTACCTGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: VIALMDKVTWVSGKPQRKDQWSV*MYCTWR Trigger: TCTCCAGGTACAATACATTCAAACACTCCACTGATC...CTTTCTCTGTGGTTTGCCTGAAACCCAAGTGACCTTATCCATAAGTGCAATGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110273.9 ENSMUST00000172184.2 |
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| CDS-3UTR GCA 90 bp | GCTGTCATTGCACTTATGGATAAGGTCACTTGGGTTTCAGGCAAACCACAGAGACCAGCGCTGAAGAGATaGTTATGGGTGATAAAAATA | + |
|
Preference number: 4 (lower is better) Translates to: AVIALMDKVTWVSGKPQRPALKR*LWVIKI Trigger: TATTTTTATCACCCATAAGCATCTCTTCAGCGCTGG...TCTCTGTGGTTTGCCTGAAACCCAAGTGACCTTATCCATAAGTGCAATGACAGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000110273.9 ENSMUST00000172184.2 |
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| CDS-3UTR GCA 90 bp | ATGGATAAGGTCACTTGGGTTTCAGGCAAACCACAGAGAAAGGATGAAATACTGTTTACCCAAAGACAGTaGCTGAGTTATCTGGATCGC | + |
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Preference number: 4 (lower is better) Translates to: MDKVTWVSGKPQRKDEILFTQRQ*LSYLDR Trigger: GCGATCCAGATAACTCAGGCACTGTCTTTGGGTAAA...CAGTATTTCATCCTTTCTCTGTGGTTTGCCTGAAACCCAAGTGACCTTATCCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110273.9 ENSMUST00000172184.2 |
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| CDS-3UTR GCA 90 bp | GATAAGGTCACTTGGGTTTCAGGCAAACCACAGAGAAAGGATGAAATACTGACACAGCTCTTCCATCTCTaGTTCATAGAACTTGTGGCA | + |
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Preference number: 4 (lower is better) Translates to: DKVTWVSGKPQRKDEILTQLFHL*FIELVA Trigger: TGCCACAAGTTCTATGAAGCAGAGATGGAAGAGCTG...TGTCAGTATTTCATCCTTTCTCTGTGGTTTGCCTGAAACCCAAGTGACCTTATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110273.9 ENSMUST00000172184.2 |
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| CDS-3UTR CCA 90 bp | CTTATGGATAAGGTCACTTGGGTTTCAGGCAAACCACAGAGAAAGGATGAAATACTCCAGCTTAAACCATaGGAGGAAAACCTCCACCTT | + |
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Preference number: 4 (lower is better) Translates to: LMDKVTWVSGKPQRKDEILQLKP*EENLHL Trigger: AAGGTGGAGGTTTTCCTCCCATGGTTTAAGCTGGAG...TATTTCATCCTTTCTCTGTGGTTTGCCTGAAACCCAAGTGACCTTATCCATAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110273.9 ENSMUST00000172184.2 |
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| CDS-3UTR TCA 90 bp | GCTGTCATTGCACTTATGGATAAGGTCACTTGGGTTTCAGGCAAACCACAGAGACAACAGATTTATGTATaGCATTGGACAGAAACAAGC | + |
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Preference number: 4 (lower is better) Translates to: AVIALMDKVTWVSGKPQRQQIYV*HWTETS Trigger: GCTTGTTTCTGTCCAATGTCATACATAAATCTGTTG...TCTCTGTGGTTTGCCTGAAACCCAAGTGACCTTATCCATAAGTGCAATGACAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110273.9 ENSMUST00000172184.2 |
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| CDS-3UTR GCA 90 bp | CTTATGGATAAGGTCACTTGGGTTTCAGGCAAACCACAGAGAAAGGATGAAATATTTACCCAAAGACAGTaGCTGAGTTATCTGGATCGC | + |
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Preference number: 4 (lower is better) Translates to: LMDKVTWVSGKPQRKDEIFTQRQ*LSYLDR Trigger: GCGATCCAGATAACTCAGGCACTGTCTTTGGGTAAA...TATTTCATCCTTTCTCTGTGGTTTGCCTGAAACCCAAGTGACCTTATCCATAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110273.9 ENSMUST00000172184.2 |
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| CDS-3UTR GCA 90 bp | CTTATGGATAAGGTCACTTGGGTTTCAGGCAAACCACAGAGAAAGGATGAAATACATCTTCACTGCTGCTaGATTTACCCAAAGACAGTG | + |
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Preference number: 4 (lower is better) Translates to: LMDKVTWVSGKPQRKDEIHLHCC*IYPKTV Trigger: CACTGTCTTTGGGTAAATGCAGCAGCAGTGAAGATG...TATTTCATCCTTTCTCTGTGGTTTGCCTGAAACCCAAGTGACCTTATCCATAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110273.9 ENSMUST00000172184.2 |
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| CDS-3UTR GCA 90 bp | CTTATGGATAAGGTCACTTGGGTTTCAGGCAAACCACAGAGAAAGGATGAAATACTCCATCTTCACTGCTaGTGCATTTACCCAAAGACA | + |
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Preference number: 4 (lower is better) Translates to: LMDKVTWVSGKPQRKDEILHLHC*CIYPKT Trigger: TGTCTTTGGGTAAATGCAGCAGCAGTGAAGATGGAG...TATTTCATCCTTTCTCTGTGGTTTGCCTGAAACCCAAGTGACCTTATCCATAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110273.9 ENSMUST00000172184.2 |
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| CDS-3UTR GCA 90 bp | TATTTCATAGCTGTCATTGCACTTATGGATAAGGTCACTTGGGTTTCAGGCAAATATTCCAGAAAAGTCTaGTCTGCCCTCCTCAAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: YFIAVIALMDKVTWVSGKYSRKV*SALLKG Trigger: GCCTTTGAGGAGGGCAGAGCAGACTTTTCTGGAATA...TTTGCCTGAAACCCAAGTGACCTTATCCATAAGTGCAATGACAGCTATGAAATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110273.9 ENSMUST00000172184.2 |
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| CDS-3UTR TCA 90 bp | GCACTTATGGATAAGGTCACTTGGGTTTCAGGCAAACCACAGAGAAAGGATGAATTAAAGGTAGACTTCTaGAACATCATTTGCACAGGT | + |
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Preference number: 4 (lower is better) Translates to: ALMDKVTWVSGKPQRKDELKVDF*NIICTG Trigger: ACCTGTGCAAATGATGTTTCAGAAGTCTACCTTTAA...TTCATCCTTTCTCTGTGGTTTGCCTGAAACCCAAGTGACCTTATCCATAAGTGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110273.9 ENSMUST00000172184.2 |
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| CDS-3UTR GCA 90 bp | TATTTCATAGCTGTCATTGCACTTATGGATAAGGTCACTTGGGTTTCAGGCAAACTCCATCTTCACTGCTaGTGCATTTACCCAAAGACA | + |
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Preference number: 4 (lower is better) Translates to: YFIAVIALMDKVTWVSGKLHLHC*CIYPKT Trigger: TGTCTTTGGGTAAATGCAGCAGCAGTGAAGATGGAG...TTTGCCTGAAACCCAAGTGACCTTATCCATAAGTGCAATGACAGCTATGAAATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110273.9 ENSMUST00000172184.2 |
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| CDS-3UTR GCA 90 bp | CTTATGGATAAGGTCACTTGGGTTTCAGGCAAACCACAGAGAAAGGATGAAATATCATGTTCAGCTCATTaGCAACATAGGGAAGCAACA | + |
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Preference number: 4 (lower is better) Translates to: LMDKVTWVSGKPQRKDEISCSAH*QHREAT Trigger: TGTTGCTTCCCTATGTTGGCAATGAGCTGAACATGA...TATTTCATCCTTTCTCTGTGGTTTGCCTGAAACCCAAGTGACCTTATCCATAAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110273.9 ENSMUST00000172184.2 |
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| CDS-3UTR CCA 90 bp | GATAAGGTCACTTGGGTTTCAGGCAAACCACAGAGAAAGGATGAAATACTGACAGCAACAAAATCTTGGTaGATATCTCTTCCACATAGG | + |
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Preference number: 4 (lower is better) Translates to: DKVTWVSGKPQRKDEILTATKSW*ISLPHR Trigger: CCTATGTGGAAGAGATATCCACCAAGATTTTGTTGC...TGTCAGTATTTCATCCTTTCTCTGTGGTTTGCCTGAAACCCAAGTGACCTTATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110273.9 ENSMUST00000172184.2 |
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| CDS-3UTR TCA 90 bp | GATAAGGTCACTTGGGTTTCAGGCAAACCACAGAGAAAGGATGAAATACTGACATTAAAGGTAGACTTCTaGAACATCATTTGCACAGGT | + |
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Preference number: 4 (lower is better) Translates to: DKVTWVSGKPQRKDEILTLKVDF*NIICTG Trigger: ACCTGTGCAAATGATGTTTCAGAAGTCTACCTTTAA...TGTCAGTATTTCATCCTTTCTCTGTGGTTTGCCTGAAACCCAAGTGACCTTATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110273.9 ENSMUST00000172184.2 |
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| CDS-3UTR TCA 90 bp | TTCATAGCTGTCATTGCACTTATGGATAAGGTCACTTGGGTTTCAGGCAAACCACAACAGATTTATGTATaGCATTGGACAGAAACAAGC | + |
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Preference number: 4 (lower is better) Translates to: FIAVIALMDKVTWVSGKPQQIYV*HWTETS Trigger: GCTTGTTTCTGTCCAATGTCATACATAAATCTGTTG...TGGTTTGCCTGAAACCCAAGTGACCTTATCCATAAGTGCAATGACAGCTATGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110273.9 ENSMUST00000172184.2 |
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| CDS-3UTR CCA 90 bp | CTTATGGATAAGGTCACTTGGGTTTCAGGCAAACCACAGAGAAAGGATGAAATAGCAACAAAATCTTGGTaGATATCTCTTCCACATAGG | + |
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Preference number: 4 (lower is better) Translates to: LMDKVTWVSGKPQRKDEIATKSW*ISLPHR Trigger: CCTATGTGGAAGAGATATCCACCAAGATTTTGTTGC...TATTTCATCCTTTCTCTGTGGTTTGCCTGAAACCCAAGTGACCTTATCCATAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110273.9 ENSMUST00000172184.2 |
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| CDS-3UTR GCA 90 bp | TATTTCATAGCTGTCATTGCACTTATGGATAAGGTCACTTGGGTTTCAGGCAAACCAGCGCTGAAGAGATaGTTATGGGTGATAAAAATA | + |
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Preference number: 4 (lower is better) Translates to: YFIAVIALMDKVTWVSGKPALKR*LWVIKI Trigger: TATTTTTATCACCCATAAGCATCTCTTCAGCGCTGG...TTTGCCTGAAACCCAAGTGACCTTATCCATAAGTGCAATGACAGCTATGAAATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000110273.9 ENSMUST00000172184.2 |
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| CDS GCA 90 bp | GAAGTAACTGGAAGCCCTGGTGGACGTCTCCATCTTCACTGCTGCTaGATTTACCCAAAGACAGTGCCTGAGTTATCTGGATCGCAGTGG | + |
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Preference number: 5 (lower is better) Translates to: EVTGSPGGRLHLHCC*IYPKTVPELSGSQW Trigger: CCACTGCGATCCAGATAACTCAGGCACTGTCTTTGGGTAAATGCAGCAGCAGTGAAGATGGAGACGTCCACCAGGGCTTCCAGTTACTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000110273.9 ENSMUST00000172184.2 ENSMUST00000222216.2 |
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| CDS-3UTR CAA 90 bp | ATAGCTGTCATTGCACTTATGGATAAGGTCACTTGGGTTTCAGGCAAACCACAGTACTGTGTGCCAGTCTaGTTCACTTCGCTGAGAAGT | + |
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Preference number: 5 (lower is better) Translates to: IAVIALMDKVTWVSGKPQYCVPV*FTSLRS Trigger: ACTTCTCAGCGAAGTGAACAAGACTGGCACACAGTA...CTGTGGTTTGCCTGAAACCCAAGTGACCTTATCCATAAGTGCAATGACAGCTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110273.9 ENSMUST00000172184.2 |
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| CDS-3UTR CAA 90 bp | GCACTTATGGATAAGGTCACTTGGGTTTCAGGCAAACCACAGAGAAAGGATGAAGGAAGCAACAAAATCTaGGTGGATATCTCTTCCACA | + |
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Preference number: 5 (lower is better) Translates to: ALMDKVTWVSGKPQRKDEGSNKI*VDISST Trigger: TGTGGAAGAGATATCCACCAAGATTTTGTTGCTTCC...TTCATCCTTTCTCTGTGGTTTGCCTGAAACCCAAGTGACCTTATCCATAAGTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110273.9 ENSMUST00000172184.2 |
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| CDS CCA 90 bp | ATGAGTTATTTCCTTTTCCACCGTACTCAGTTCAACGTGTTCATCTaGAAGCATGATGATCATGTTCAGCTCATTGCCAACATAGGGAAG | + |
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Preference number: 5 (lower is better) Translates to: MSYFLFHRTQFNVFI*KHDDHVQLIANIGK Trigger: CTTCCCTATGTTGGCAATGAGCTGAACATGATCATCATGCTTCCAGATGAACACGTTGAACTGAGTACGGTGGAAAAGGAAATAACTCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110273.9 ENSMUST00000172184.2 |
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| CDS-3UTR CAA 90 bp | TATTTCATAGCTGTCATTGCACTTATGGATAAGGTCACTTGGGTTTCAGGCAAATACTGTGTGCCAGTCTaGTTCACTTCGCTGAGAAGT | + |
|
Preference number: 5 (lower is better) Translates to: YFIAVIALMDKVTWVSGKYCVPV*FTSLRS Trigger: ACTTCTCAGCGAAGTGAACAAGACTGGCACACAGTA...TTTGCCTGAAACCCAAGTGACCTTATCCATAAGTGCAATGACAGCTATGAAATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110273.9 ENSMUST00000172184.2 |
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| CDS-3UTR CAA 90 bp | ATAGCTGTCATTGCACTTATGGATAAGGTCACTTGGGTTTCAGGCAAACCACAGGAGTGTTTGAATGTATaGTACCTGGAGATAGCAACT | + |
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Preference number: 5 (lower is better) Translates to: IAVIALMDKVTWVSGKPQECLNV*YLEIAT Trigger: AGTTGCTATCTCCAGGTACAATACATTCAAACACTC...CTGTGGTTTGCCTGAAACCCAAGTGACCTTATCCATAAGTGCAATGACAGCTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110273.9 ENSMUST00000172184.2 |
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| CDS-3UTR CAA 90 bp | GCACTTATGGATAAGGTCACTTGGGTTTCAGGCAAACCACAGAGAAAGGATGAAGAGTGTTTGAATGTATaGTACCTGGAGATAGCAACT | + |
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Preference number: 5 (lower is better) Translates to: ALMDKVTWVSGKPQRKDEECLNV*YLEIAT Trigger: AGTTGCTATCTCCAGGTACAATACATTCAAACACTC...TTCATCCTTTCTCTGTGGTTTGCCTGAAACCCAAGTGACCTTATCCATAAGTGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110273.9 ENSMUST00000172184.2 |
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| CDS-3UTR CAA 90 bp | GCACTTATGGATAAGGTCACTTGGGTTTCAGGCAAACCACAGAGAAAGGATGAACTTCTGAAACATCATTaGCACAGGTTTCTCCTCATT | + |
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Preference number: 5 (lower is better) Translates to: ALMDKVTWVSGKPQRKDELLKHH*HRFLLI Trigger: AATGAGGAGAAACCTGTGCAAATGATGTTTCAGAAG...TTCATCCTTTCTCTGTGGTTTGCCTGAAACCCAAGTGACCTTATCCATAAGTGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110273.9 ENSMUST00000172184.2 |
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| CDS-3UTR CAA 90 bp | ATGGATAAGGTCACTTGGGTTTCAGGCAAACCACAGAGAAAGGATGAAATACTGGGAAGCAACAAAATCTaGGTGGATATCTCTTCCACA | + |
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Preference number: 5 (lower is better) Translates to: MDKVTWVSGKPQRKDEILGSNKI*VDISST Trigger: TGTGGAAGAGATATCCACCAAGATTTTGTTGCTTCC...CAGTATTTCATCCTTTCTCTGTGGTTTGCCTGAAACCCAAGTGACCTTATCCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110273.9 ENSMUST00000172184.2 |
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| CDS-3UTR CAA 90 bp | ATGGATAAGGTCACTTGGGTTTCAGGCAAACCACAGAGAAAGGATGAAATACTGGATTTATGTATGACATaGGACAGAAACAAGCCTTGC | + |
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Preference number: 5 (lower is better) Translates to: MDKVTWVSGKPQRKDEILDLCMT*DRNKPC Trigger: GCAAGGCTTGTTTCTGTCCAATGTCATACATAAATC...CAGTATTTCATCCTTTCTCTGTGGTTTGCCTGAAACCCAAGTGACCTTATCCAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110273.9 ENSMUST00000172184.2 |
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| CDS-3UTR CAA 90 bp | GATAAGGTCACTTGGGTTTCAGGCAAACCACAGAGAAAGGATGAAATACTGACAGATTTATGTATGACATaGGACAGAAACAAGCCTTGC | + |
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Preference number: 5 (lower is better) Translates to: DKVTWVSGKPQRKDEILTDLCMT*DRNKPC Trigger: GCAAGGCTTGTTTCTGTCCAATGTCATACATAAATC...TGTCAGTATTTCATCCTTTCTCTGTGGTTTGCCTGAAACCCAAGTGACCTTATC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110273.9 ENSMUST00000172184.2 |
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| CDS GCA 72 bp | GGAAGCCCTGGTGGACGTCTCCATCTTCACTGCTGCTaGATTTACCCAAAGACAGTGCCTGAGTTATCTGGA | + |
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Preference number: 6 (lower is better) Translates to: GSPGGRLHLHCC*IYPKTVPELSG Trigger: TCCAGATAACTCAGGCACTGTCTTTGGGTAAATGCAGCAGCAGTGAAGATGGAGACGTCCACCAGGGCTTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000110273.9 ENSMUST00000172184.2 ENSMUST00000222216.2 |
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| CDS GCA 72 bp | ACTGGAAGCCCTGGTGGACGTCTCCATCTTCACTGCTaGTGCATTTACCCAAAGACAGTGCCTGAGTTATCT | + |
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Preference number: 6 (lower is better) Translates to: TGSPGGRLHLHC*CIYPKTVPELS Trigger: AGATAACTCAGGCACTGTCTTTGGGTAAATGCAGCAGCAGTGAAGATGGAGACGTCCACCAGGGCTTCCAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000110273.9 ENSMUST00000172184.2 ENSMUST00000222216.2 |
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| CDS CAA 90 bp | AGCAACTCTTTGATTTTATCTTCTGTCTTTTTGGCTACCCAGGTGTaGATGTGCTGTCGGGACTGCTCTGTAGCACCCTTAAAGTCCAGC | + |
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Preference number: 6 (lower is better) Translates to: SNSLILSSVFLATQV*MCCRDCSVAPLKSS Trigger: GCTGGACTTTAAGGGTGCTACAGAGCAGTCCCGACAGCACATCAACACCTGGGTAGCCAAAAAGACAGAAGATAAAATCAAAGAGTTGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000110273.9 ENSMUST00000172184.2 ENSMUST00000222216.2 |
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| CDS CAA 72 bp | TTGATTTTATCTTCTGTCTTTTTGGCTACCCAGGTGTaGATGTGCTGTCGGGACTGCTCTGTAGCACCCTTA | + |
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Preference number: 6 (lower is better) Translates to: LILSSVFLATQV*MCCRDCSVAPL Trigger: TAAGGGTGCTACAGAGCAGTCCCGACAGCACATCAACACCTGGGTAGCCAAAAAGACAGAAGATAAAATCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000110273.9 ENSMUST00000172184.2 ENSMUST00000222216.2 |
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| CDS CCA 72 bp | TTCCTTTTCCACCGTACTCAGTTCAACGTGTTCATCTaGAAGCATGATGATCATGTTCAGCTCATTGCCAAC | + |
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Preference number: 6 (lower is better) Translates to: FLFHRTQFNVFI*KHDDHVQLIAN Trigger: GTTGGCAATGAGCTGAACATGATCATCATGCTTCCAGATGAACACGTTGAACTGAGTACGGTGGAAAAGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110273.9 ENSMUST00000172184.2 |
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| CDS CAA 90 bp | CACCTCCACAACAGATTTATGTATGACATTGGACAGAAACAAGCCTaGCTTGGAAGATATTCCAGAAAAGTCTGCTCTGCCCTCCTCAAA | + |
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Preference number: 6 (lower is better) Translates to: HLHNRFMYDIGQKQA*LGRYSRKVCSALLK Trigger: TTTGAGGAGGGCAGAGCAGACTTTTCTGGAATATCTTCCAAGCAAGGCTTGTTTCTGTCCAATGTCATACATAAATCTGTTGTGGAGGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110273.9 ENSMUST00000172184.2 |
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| CDS CAA 72 bp | ATCATTTGCACAGGTTTCTCCTCATTCTTGCTGACTTaGAATGGCATCTCCCTGGTGTCCTCTTTGTTAAAC | + |
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Preference number: 6 (lower is better) Translates to: IICTGFSSFLLT*NGISLVSSLLN Trigger: GTTTAACAAAGAGGACACCAGGGAGATGCCATTCAAAGTCAGCAAGAATGAGGAGAAACCTGTGCAAATGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110273.9 ENSMUST00000172184.2 |
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| CDS CAA 90 bp | CTCTTCCACATAGGTCATCTTAAAGGTAGACTTCTGAAACATCATTaGCACAGGTTTCTCCTCATTCTTGCTGACTTTGAATGGCATCTC | + |
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Preference number: 6 (lower is better) Translates to: LFHIGHLKGRLLKHH*HRFLLILADFEWHL Trigger: GAGATGCCATTCAAAGTCAGCAAGAATGAGGAGAAACCTGTGCAAATGATGTTTCAGAAGTCTACCTTTAAGATGACCTATGTGGAAGAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110273.9 ENSMUST00000172184.2 |
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