Pregenerated sensors for SERPINB6B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000042842Ensembl transcript IDs: ENSMUST00000017184.10, ENSMUST00000110293.9, ENSMUST00000164541.2
Found 89 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GTGAATGACCTTGGACAGAAACAAGCCTTCTTTAGATGCTATTCCTaGAAAGTCTGCCATGCCCTCCTCAAAGGCATCAGTCATGCCCAG | + |
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Preference number: 1 (lower is better) Translates to: VNDLGQKQAFFRCYS*KVCHALLKGISHAQ Trigger: CTGGGCATGACTGATGCCTTTGAGGAGGGCATGGCAGACTTTTCAGGAATAGCATCTAAAGAAGGCTTGTTTCTGTCCAAGGTCATTCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017184.10 |
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| 3UTR CCA 90 bp | GCACAGGACATCTTTCATGTCGTAGTTCTCCTCCAGCTTAAACTTTaGGAGGAAAACCTCCACCTCTTCTTCTTCCATCTTGTCCAGCCT | + |
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Preference number: 1 (lower is better) Translates to: AQDIFHVVVLLQLKL*EENLHLFFFHLVQP Trigger: AGGCTGGACAAGATGGAAGAAGAAGAGGTGGAGGTTTTCCTCCCAAAGTTTAAGCTGGAGGAGAACTACGACATGAAAGATGTCCTGTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017184.10 |
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| 3UTR TCA 90 bp | TGCTTTGAACTTGCTATGCAGTTGAGGCTAGCCCTGCATGATCTCTaGTTCTCTCACCTTCATCTGCTAAATGTTAGCTTTTCAGGTGTG | + |
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Preference number: 1 (lower is better) Translates to: CFELAMQLRLALHDL*FSHLHLLNVSFSGV Trigger: CACACCTGAAAAGCTAACATTTAGCAGATGAAGGTGAGAGAATCAGAGATCATGCAGGGCTAGCCTCAACTGCATAGCAAGTTCAAAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017184.10 ENSMUST00000110293.9 ENSMUST00000164541.2 |
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| 3UTR TCA 90 bp | GTTTATCTCATGATGGTTCACAGTGTGGTAAAGTTACTTCAGTATTaGAGGTTACAGTCTAGGAAAAGGTTAATGTTGGGATCAAGGGGT | + |
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Preference number: 1 (lower is better) Translates to: VYLMMVHSVVKLLQY*RLQSRKRLMLGSRG Trigger: ACCCCTTGATCCCAACATTAACCTTTTCCTAGACTGTAACCTTCAATACTGAAGTAACTTTACCACACTGTGAACCATCATGAGATAAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000017184.10 ENSMUST00000110293.9 ENSMUST00000164541.2 |
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| 3UTR-3UTR GCA 90 bp | CCCTGGAACTGTACAGAAGCCCCAACTATGTTCTGCAGCTTCCAGAACTGTAAACTGAAAAGTCTGCCATaGCCTCCTCAAAGGCATCAG | + |
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Preference number: 2 (lower is better) Translates to: PWNCTEAPTMFCSFQNCKLKSLP*PPQRHQ Trigger: CTGATGCCTTTGAGGAGGGCATGGCAGACTTTTCAG...TTTACAGTTCTGGAAGCTGCAGAACATAGTTGGGGCTTCTGTACAGTTCCAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017184.10 |
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| 3UTR-3UTR TCA 90 bp | CTCATGGGGAGGAGAACCGACCACAGAACACAATCCCACTGGTCCTGCTGTGTTGCCTCGTCCACTCTATaGATTTCTTATAAGTTATCT | + |
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Preference number: 2 (lower is better) Translates to: LMGRRTDHRTQSHWSCCVASSTL*ISYKLS Trigger: AGATAACTTATAAGAAATTCATAGAGTGGACGAGGC...AACACAGCAGGACCAGTGGGATTGTGTTCTGTGGTCGGTTCTCCTCCCCATGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017184.10 |
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| 3UTR-3UTR TCA 90 bp | AGGATGAAGGGTGCTCACTTGGATAAAGTTTATCTCATGATGGTTCACAGTGTGGAGGCTAGCCCTGCATaGTCTCTGATTCTCTCACCT | + |
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Preference number: 2 (lower is better) Translates to: RMKGAHLDKVYLMMVHSVEASPA*SLILSP Trigger: AGGTGAGAGAATCAGAGATCATGCAGGGCTAGCCTC...CACACTGTGAACCATCATGAGATAAACTTTATCCAAGTGAGCACCCTTCATCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017184.10 ENSMUST00000110293.9 ENSMUST00000164541.2 |
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| 3UTR-3UTR CCA 90 bp | ACACTCTTGCATGATCCTGTTTTTGTGAAACCATTTTCCCTGGAACTGTACAGAAATGGGCAAAGGCAGTaGCCTGACACCACAGCATCC | + |
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Preference number: 2 (lower is better) Translates to: TLLHDPVFVKPFSLELYRNGQRQ*PDTTAS Trigger: GGATGCTGTGGTGTCAGGCCACTGCCTTTGCCCATT...TCTGTACAGTTCCAGGGAAAATGGTTTCACAAAAACAGGATCATGCAAGAGTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000017184.10 ENSMUST00000110293.9 ENSMUST00000164541.2 |
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| 3UTR-3UTR CCA 90 bp | ACAGAAGCCCCAACTATGTTCTGCAGCTTCCAGAACTGTAAACAAAATACTATTAATGGGCAAAGGCAGTaGCCTGACACCACAGCATCC | + |
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Preference number: 2 (lower is better) Translates to: TEAPTMFCSFQNCKQNTINGQRQ*PDTTAS Trigger: GGATGCTGTGGTGTCAGGCCACTGCCTTTGCCCATT...AATAGTATTTTGTTTACAGTTCTGGAAGCTGCAGAACATAGTTGGGGCTTCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000017184.10 ENSMUST00000110293.9 ENSMUST00000164541.2 |
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| 3UTR-3UTR CCA 90 bp | GCACAGGACATCTTTCATGTCGTAGTTCTCCTCCAGCTTAAACTTTGGGAGGAAGCAACAGAATGTTGGTaGATATCTCTTCCACATAGG | + |
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Preference number: 2 (lower is better) Translates to: AQDIFHVVVLLQLKLWEEATECW*ISLPHR Trigger: CCTATGTGGAAGAGATATCCACCAACATTCTGTTGC...TTCCTCCCAAAGTTTAAGCTGGAGGAGAACTACGACATGAAAGATGTCCTGTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017184.10 |
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| 3UTR-3UTR CCA 90 bp | ACACTCTTGCATGATCCTGTTTTTGTGAAACCATTTTCCCTGGAACTGTACAGACTCCAGCTTAAACTTTaGGAGGAAAACCTCCACCTC | + |
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Preference number: 2 (lower is better) Translates to: TLLHDPVFVKPFSLELYRLQLKL*EENLHL Trigger: GAGGTGGAGGTTTTCCTCCCAAAGTTTAAGCTGGAG...TCTGTACAGTTCCAGGGAAAATGGTTTCACAAAAACAGGATCATGCAAGAGTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000017184.10 |
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| 3UTR-3UTR TCA 90 bp | AGGATGAAGGGTGCTCACTTGGATAAAGTTTATCTCATGATGGTTCACAGTGTGCTCAACACTCTTGCATaGTCCTGTTTTTGTGAAACC | + |
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Preference number: 2 (lower is better) Translates to: RMKGAHLDKVYLMMVHSVLNTLA*SCFCET Trigger: GGTTTCACAAAAACAGGATCATGCAAGAGTGTTGAG...CACACTGTGAACCATCATGAGATAAACTTTATCCAAGTGAGCACCCTTCATCCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000017184.10 ENSMUST00000110293.9 ENSMUST00000164541.2 |
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| 3UTR-3UTR TCA 90 bp | ACAGAAGCCCCAACTATGTTCTGCAGCTTCCAGAACTGTAAACAAAATACTATTGATGCAGACAAATCATaGGAAAAAGAATGGGCAAAG | + |
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Preference number: 2 (lower is better) Translates to: TEAPTMFCSFQNCKQNTIDADKS*EKEWAK Trigger: CTTTGCCCATTCTTTTTCTCATGATTTGTCTGCATC...AATAGTATTTTGTTTACAGTTCTGGAAGCTGCAGAACATAGTTGGGGCTTCTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000017184.10 ENSMUST00000110293.9 ENSMUST00000164541.2 |
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| 3UTR-3UTR TCA 90 bp | ACAGAAGCCCCAACTATGTTCTGCAGCTTCCAGAACTGTAAACAAAATACTATTTGTCACAACATTTACTaGTGCAGACAAATCATGAGA | + |
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Preference number: 2 (lower is better) Translates to: TEAPTMFCSFQNCKQNTICHNIY*CRQIMR Trigger: TCTCATGATTTGTCTGCATCAGTAAATGTTGTGACA...AATAGTATTTTGTTTACAGTTCTGGAAGCTGCAGAACATAGTTGGGGCTTCTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000017184.10 ENSMUST00000110293.9 ENSMUST00000164541.2 |
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| 3UTR CCA 72 bp | AAAGGCAGTGGCCTGACACCACAGCATCCTTTCTCATaGGGAGGAGAACCGACCACAGAACACAATCCCACT | + |
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Preference number: 3 (lower is better) Translates to: KGSGLTPQHPFS*GGEPTTEHNPT Trigger: AGTGGGATTGTGTTCTGTGGTCGGTTCTCCTCCCCATGAGAAAGGATGCTGTGGTGTCAGGCCACTGCCTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017184.10 |
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| 3UTR-3UTR CAA 90 bp | GCACAGGACATCTTTCATGTCGTAGTTCTCCTCCAGCTTAAACTTTGGGAGGAAGGAAGCAACAGAATGTaGGTGGATATCTCTTCCACA | + |
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Preference number: 3 (lower is better) Translates to: AQDIFHVVVLLQLKLWEEGSNRM*VDISST Trigger: TGTGGAAGAGATATCCACCAACATTCTGTTGCTTCC...TTCCTCCCAAAGTTTAAGCTGGAGGAGAACTACGACATGAAAGATGTCCTGTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017184.10 |
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| 3UTR TCA 72 bp | CTTGCTATGCAGTTGAGGCTAGCCCTGCATGATCTCTaGTTCTCTCACCTTCATCTGCTAAATGTTAGCTTT | + |
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Preference number: 3 (lower is better) Translates to: LAMQLRLALHDL*FSHLHLLNVSF Trigger: AAAGCTAACATTTAGCAGATGAAGGTGAGAGAATCAGAGATCATGCAGGGCTAGCCTCAACTGCATAGCAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017184.10 ENSMUST00000110293.9 ENSMUST00000164541.2 |
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| 3UTR-3UTR CAA 90 bp | ACACTCTTGCATGATCCTGTTTTTGTGAAACCATTTTCCCTGGAACTGTACAGACTACCAAGTGCAGAATaGTCACAACATTTACTGATG | + |
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Preference number: 3 (lower is better) Translates to: TLLHDPVFVKPFSLELYRLPSAE*SQHLLM Trigger: CATCAGTAAATGTTGTGACAATTCTGCACTTGGTAG...TCTGTACAGTTCCAGGGAAAATGGTTTCACAAAAACAGGATCATGCAAGAGTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000017184.10 ENSMUST00000110293.9 ENSMUST00000164541.2 |
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| 3UTR TCA 72 bp | CTTCTTCTTCCATCTTGTCCAGCCTCGTCCACTCTATaGATTTCTTATAAGTTATCTCCTTTTCCACCATAC | + |
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Preference number: 3 (lower is better) Translates to: LLLPSCPASSTL*ISYKLSPFPPY Trigger: GTATGGTGGAAAAGGAGATAACTTATAAGAAATTCATAGAGTGGACGAGGCTGGACAAGATGGAAGAAGAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017184.10 |
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| 3UTR TCA 72 bp | GAATCTGAAACTTATATACTGCTCAACACTCTTGCATaGTCCTGTTTTTGTGAAACCATTTTCCCTGGAACT | + |
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Preference number: 3 (lower is better) Translates to: ESETYILLNTLA*SCFCETIFPGT Trigger: AGTTCCAGGGAAAATGGTTTCACAAAAACAGGATCATGCAAGAGTGTTGAGCAGTATATAAGTTTCAGATTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000017184.10 ENSMUST00000110293.9 ENSMUST00000164541.2 |
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| 3UTR TCA 72 bp | ATGATGGTTCACAGTGTGGTAAAGTTACTTCAGTATTaGAGGTTACAGTCTAGGAAAAGGTTAATGTTGGGA | + |
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Preference number: 3 (lower is better) Translates to: MMVHSVVKLLQY*RLQSRKRLMLG Trigger: TCCCAACATTAACCTTTTCCTAGACTGTAACCTTCAATACTGAAGTAACTTTACCACACTGTGAACCATCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017184.10 ENSMUST00000110293.9 ENSMUST00000164541.2 |
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| CDS-3UTR TCA 90 bp | CAGCATCCTTTCTCATGGGGAGGAGAACCGACCACAGAACACAATCCCACTGGTGCCTGTTGGCTGTTCTaGGCACATACTGTGTGCCAG | + |
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Preference number: 4 (lower is better) Translates to: QHPFSWGGEPTTEHNPTGACWLF*AHTVCQ Trigger: CTGGCACACAGTATGTGCTCAGAACAGCCAACAGGC...ACCAGTGGGATTGTGTTCTGTGGTCGGTTCTCCTCCCCATGAGAAAGGATGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017184.10 |
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| CDS-3UTR TCA 90 bp | CCCTGGAACTGTACAGAAGCCCCAACTATGTTCTGCAGCTTCCAGAACTGTAAAGCCTGTTGGCTGTTCTaGGCACATACTGTGTGCCAG | + |
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Preference number: 4 (lower is better) Translates to: PWNCTEAPTMFCSFQNCKACWLF*AHTVCQ Trigger: CTGGCACACAGTATGTGCTCAGAACAGCCAACAGGC...TTTACAGTTCTGGAAGCTGCAGAACATAGTTGGGGCTTCTGTACAGTTCCAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017184.10 ENSMUST00000110293.9 |
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| CDS-3UTR TCA 90 bp | ATCATGAGAAAAAGAATGGGCAAAGGCAGTGGCCTGACACCACAGCATCCTTTCTCCAAAGACAGTGCCTaGGCCATCTGGCTTGCAGTA | + |
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Preference number: 4 (lower is better) Translates to: IMRKRMGKGSGLTPQHPFSKDSA*AIWLAV Trigger: TACTGCAAGCCAGATGGCTCAGGCACTGTCTTTGGA...GAAAGGATGCTGTGGTGTCAGGCCACTGCCTTTGCCCATTCTTTTTCTCATGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000017184.10 ENSMUST00000110293.9 |
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| CDS-3UTR GCA 90 bp | CTCATGGGGAGGAGAACCGACCACAGAACACAATCCCACTGGTCCTGCTGTGTTCATCTCTACCTCCTTTaGCACTGCATTTATCCAAAG | + |
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Preference number: 4 (lower is better) Translates to: LMGRRTDHRTQSHWSCCVHLYLL*HCIYPK Trigger: CTTTGGATAAATGCAGTGGCAAAGGAGGTAGAGATG...AACACAGCAGGACCAGTGGGATTGTGTTCTGTGGTCGGTTCTCCTCCCCATGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017184.10 |
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| CDS-3UTR CCA 90 bp | AATCATGAGAAAAAGAATGGGCAAAGGCAGTGGCCTGACACCACAGCATCCTTTCTATATTGGCTGCAGTaGCAGCTGCAGCCTCTGTGC | + |
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Preference number: 4 (lower is better) Translates to: NHEKKNGQRQWPDTTASFLYWLQ*QLQPLC Trigger: GCACAGAGGCTGCAGCTGCCACTGCAGCCAATATAG...AAAGGATGCTGTGGTGTCAGGCCACTGCCTTTGCCCATTCTTTTTCTCATGATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000110293.9 ENSMUST00000164541.2 |
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| CDS-3UTR TCA 90 bp | CAGCATCCTTTCTCATGGGGAGGAGAACCGACCACAGAACACAATCCCACTGGTTCTTGTTCGTTTCTGTaGGAAGTGATTGGAATCCCT | + |
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Preference number: 4 (lower is better) Translates to: QHPFSWGGEPTTEHNPTGSCSFL*EVIGIP Trigger: AGGGATTCCAATCACTTCTCACAGAAACGAACAAGA...ACCAGTGGGATTGTGTTCTGTGGTCGGTTCTCCTCCCCATGAGAAAGGATGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017184.10 |
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| CDS-3UTR GCA 90 bp | ATCATGAGAAAAAGAATGGGCAAAGGCAGTGGCCTGACACCACAGCATCCTTTCCTGAAAAGTCTGCCATaGCCTCCTCAAAGGCATCAG | + |
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Preference number: 4 (lower is better) Translates to: IMRKRMGKGSGLTPQHPFLKSLP*PPQRHQ Trigger: CTGATGCCTTTGAGGAGGGCATGGCAGACTTTTCAG...GAAAGGATGCTGTGGTGTCAGGCCACTGCCTTTGCCCATTCTTTTTCTCATGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000110293.9 ENSMUST00000164541.2 |
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| CDS-3UTR CCA 90 bp | TCTCACCTTCATCTGCTAAATGTTAGCTTTTCAGGTGTGTGCTACCAAGTGCAGCTATATTGGCTGCAGTaGCAGCTGCAGCCTCTGTGC | + |
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Preference number: 4 (lower is better) Translates to: SHLHLLNVSFSGVCYQVQLYWLQ*QLQPLC Trigger: GCACAGAGGCTGCAGCTGCCACTGCAGCCAATATAG...CTGCACTTGGTAGCACACACCTGAAAAGCTAACATTTAGCAGATGAAGGTGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110293.9 ENSMUST00000164541.2 |
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| CDS-3UTR CCA 90 bp | AATCATGAGAAAAAGAATGGGCAAAGGCAGTGGCCTGACACCACAGCATCCTTTAAAGGAAAGGGTGGTTaGCACAGAAGTAGGGGACCA | + |
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Preference number: 4 (lower is better) Translates to: NHEKKNGQRQWPDTTASFKGKGG*HRSRGP Trigger: TGGTCCCCTACTTCTGTGCCAACCACCCTTTCCTTT...AAAGGATGCTGTGGTGTCAGGCCACTGCCTTTGCCCATTCTTTTTCTCATGATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000110293.9 ENSMUST00000164541.2 |
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| CDS-3UTR TCA 90 bp | TTTCAGGTGTGTGCTACCAAGTGCAGAATTGTCACAACATTTACTGATGCAGACTCCAAAGACAGTGCCTaGGCCATCTGGCTTGCAGTA | + |
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Preference number: 4 (lower is better) Translates to: FQVCATKCRIVTTFTDADSKDSA*AIWLAV Trigger: TACTGCAAGCCAGATGGCTCAGGCACTGTCTTTGGA...GTCTGCATCAGTAAATGTTGTGACAATTCTGCACTTGGTAGCACACACCTGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017184.10 ENSMUST00000110293.9 |
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| CDS-3UTR CCA 90 bp | CCCTGGAACTGTACAGAAGCCCCAACTATGTTCTGCAGCTTCCAGAACTGTAAATCTGTGAGAAGTGATTaGAATCCCTGGTGGACATCT | + |
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Preference number: 4 (lower is better) Translates to: PWNCTEAPTMFCSFQNCKSVRSD*NPWWTS Trigger: AGATGTCCACCAGGGATTCCAATCACTTCTCACAGA...TTTACAGTTCTGGAAGCTGCAGAACATAGTTGGGGCTTCTGTACAGTTCCAGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017184.10 ENSMUST00000110293.9 |
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| CDS-3UTR TCA 90 bp | AATCATGAGAAAAAGAATGGGCAAAGGCAGTGGCCTGACACCACAGCATCCTTTCAAAGGACTTGTGAATaGCCTTGGACAGAAACAAGC | + |
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Preference number: 4 (lower is better) Translates to: NHEKKNGQRQWPDTTASFQRTCE*PWTETS Trigger: GCTTGTTTCTGTCCAAGGTCATTCACAAGTCCTTTG...AAAGGATGCTGTGGTGTCAGGCCACTGCCTTTGCCCATTCTTTTTCTCATGATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000110293.9 ENSMUST00000164541.2 |
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| CDS-3UTR GCA 90 bp | TTCTCTCACCTTCATCTGCTAAATGTTAGCTTTTCAGGTGTGTGCTACCAAGTGCTGAAAAGTCTGCCATaGCCTCCTCAAAGGCATCAG | + |
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Preference number: 4 (lower is better) Translates to: FSHLHLLNVSFSGVCYQVLKSLP*PPQRHQ Trigger: CTGATGCCTTTGAGGAGGGCATGGCAGACTTTTCAG...CACTTGGTAGCACACACCTGAAAAGCTAACATTTAGCAGATGAAGGTGAGAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110293.9 ENSMUST00000164541.2 |
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| 3UTR CAA 72 bp | CCCAGTATTGCTGCAGAGAGGATGAAGGGTGCTCACTaGGATAAAGTTTATCTCATGATGGTTCACAGTGTG | + |
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Preference number: 4 (lower is better) Translates to: PSIAAERMKGAH*DKVYLMMVHSV Trigger: CACACTGTGAACCATCATGAGATAAACTTTATCCAAGTGAGCACCCTTCATCCTCTCTGCAGCAATACTGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017184.10 ENSMUST00000110293.9 ENSMUST00000164541.2 |
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| CDS-3UTR GCA 90 bp | TTCTCTCACCTTCATCTGCTAAATGTTAGCTTTTCAGGTGTGTGCTACCAAGTGCAGCTCTTCCATCTCTaGTTCATAGAACTTGCGGCA | + |
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Preference number: 4 (lower is better) Translates to: FSHLHLLNVSFSGVCYQVQLFHL*FIELAA Trigger: TGCCGCAAGTTCTATGAAGCAGAGATGGAAGAGCTG...CACTTGGTAGCACACACCTGAAAAGCTAACATTTAGCAGATGAAGGTGAGAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017184.10 ENSMUST00000110293.9 |
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| CDS-3UTR CCA 90 bp | AGGATGAAGGGTGCTCACTTGGATAAAGTTTATCTCATGATGGTTCACAGTGTGCTCCAGCTTAAACTTTaGGAGGAAAACCTCCACCTC | + |
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Preference number: 4 (lower is better) Translates to: RMKGAHLDKVYLMMVHSVLQLKL*EENLHL Trigger: GAGGTGGAGGTTTTCCTCCCAAAGTTTAAGCTGGAG...CACACTGTGAACCATCATGAGATAAACTTTATCCAAGTGAGCACCCTTCATCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110293.9 ENSMUST00000164541.2 |
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| CDS-3UTR TCA 90 bp | TTCTCTCACCTTCATCTGCTAAATGTTAGCTTTTCAGGTGTGTGCTACCAAGTGCAAAGGACTTGTGAATaGCCTTGGACAGAAACAAGC | + |
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Preference number: 4 (lower is better) Translates to: FSHLHLLNVSFSGVCYQVQRTCE*PWTETS Trigger: GCTTGTTTCTGTCCAAGGTCATTCACAAGTCCTTTG...CACTTGGTAGCACACACCTGAAAAGCTAACATTTAGCAGATGAAGGTGAGAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110293.9 ENSMUST00000164541.2 |
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| CDS-3UTR GCA 90 bp | TCTCACCTTCATCTGCTAAATGTTAGCTTTTCAGGTGTGTGCTACCAAGTGCAGCATCTCTACCTCCTTTaGCACTGCATTTATCCAAAG | + |
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Preference number: 4 (lower is better) Translates to: SHLHLLNVSFSGVCYQVQHLYLL*HCIYPK Trigger: CTTTGGATAAATGCAGTGGCAAAGGAGGTAGAGATG...CTGCACTTGGTAGCACACACCTGAAAAGCTAACATTTAGCAGATGAAGGTGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017184.10 ENSMUST00000110293.9 |
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| CDS-3UTR CCA 90 bp | ACAGAAGCCCCAACTATGTTCTGCAGCTTCCAGAACTGTAAACAAAATACTATTAAAGGAAAGGGTGGTTaGCACAGAAGTAGGGGACCA | + |
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Preference number: 4 (lower is better) Translates to: TEAPTMFCSFQNCKQNTIKGKGG*HRSRGP Trigger: TGGTCCCCTACTTCTGTGCCAACCACCCTTTCCTTT...AATAGTATTTTGTTTACAGTTCTGGAAGCTGCAGAACATAGTTGGGGCTTCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000110293.9 ENSMUST00000164541.2 |
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| CDS-3UTR TCA 90 bp | AGGATGAAGGGTGCTCACTTGGATAAAGTTTATCTCATGATGGTTCACAGTGTGGGAGACGCTTATAGGTaGGAAAAGTACATTTCTGGA | + |
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Preference number: 4 (lower is better) Translates to: RMKGAHLDKVYLMMVHSVGDAYR*EKYISG Trigger: TCCAGAAATGTACTTTTCTCACCTATAAGCGTCTCC...CACACTGTGAACCATCATGAGATAAACTTTATCCAAGTGAGCACCCTTCATCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017184.10 ENSMUST00000110293.9 |
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| CDS-3UTR GCA 90 bp | CTTTTCAGGTGTGTGCTACCAAGTGCAGAATTGTCACAACATTTACTGATGCAGTACCTCCTTTGCCACTaGATTTATCCAAAGACAGTG | + |
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Preference number: 4 (lower is better) Translates to: LFRCVLPSAELSQHLLMQYLLCH*IYPKTV Trigger: CACTGTCTTTGGATAAATGCAGTGGCAAAGGAGGTA...CTGCATCAGTAAATGTTGTGACAATTCTGCACTTGGTAGCACACACCTGAAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017184.10 ENSMUST00000110293.9 |
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| CDS-3UTR GCA 90 bp | TTTCAGGTGTGTGCTACCAAGTGCAGAATTGTCACAACATTTACTGATGCAGACTACCTCCTTTGCCACTaGATTTATCCAAAGACAGTG | + |
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Preference number: 4 (lower is better) Translates to: FQVCATKCRIVTTFTDADYLLCH*IYPKTV Trigger: CACTGTCTTTGGATAAATGCAGTGGCAAAGGAGGTA...GTCTGCATCAGTAAATGTTGTGACAATTCTGCACTTGGTAGCACACACCTGAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017184.10 ENSMUST00000110293.9 |
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| CDS-3UTR CCA 90 bp | CTTTTCAGGTGTGTGCTACCAAGTGCAGAATTGTCACAACATTTACTGATGCAGAGAAAAGTACATTTCTaGAGCTGTCTTCACCCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: LFRCVLPSAELSQHLLMQRKVHF*SCLHPV Trigger: CACTGGGTGAAGACAGCTCCAGAAATGTACTTTTCT...CTGCATCAGTAAATGTTGTGACAATTCTGCACTTGGTAGCACACACCTGAAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017184.10 ENSMUST00000110293.9 |
||
| CDS-3UTR CCA 90 bp | TGTTTAGCTCATTGCCAACATAGGGAAGCAACAGAATGTTGGTGGATATCTCTTTCTGTGAGAAGTGATTaGAATCCCTGGTGGACATCT | + |
|
Preference number: 4 (lower is better) Translates to: CLAHCQHREATECWWISLSVRSD*NPWWTS Trigger: AGATGTCCACCAGGGATTCCAATCACTTCTCACAGA...AAGAGATATCCACCAACATTCTGTTGCTTCCCTATGTTGGCAATGAGCTAAACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017184.10 |
||
| CDS-3UTR CCA 90 bp | CTTTTCAGGTGTGTGCTACCAAGTGCAGAATTGTCACAACATTTACTGATGCAGGCAACAGAATGTTGGTaGATATCTCTTCCACATAGG | + |
|
Preference number: 4 (lower is better) Translates to: LFRCVLPSAELSQHLLMQATECW*ISLPHR Trigger: CCTATGTGGAAGAGATATCCACCAACATTCTGTTGC...CTGCATCAGTAAATGTTGTGACAATTCTGCACTTGGTAGCACACACCTGAAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110293.9 ENSMUST00000164541.2 |
||
| CDS-3UTR CCA 90 bp | ACAGAAGCCCCAACTATGTTCTGCAGCTTCCAGAACTGTAAACAAAATACTATTCTCCAGCTTAAACTTTaGGAGGAAAACCTCCACCTC | + |
|
Preference number: 4 (lower is better) Translates to: TEAPTMFCSFQNCKQNTILQLKL*EENLHL Trigger: GAGGTGGAGGTTTTCCTCCCAAAGTTTAAGCTGGAG...AATAGTATTTTGTTTACAGTTCTGGAAGCTGCAGAACATAGTTGGGGCTTCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000110293.9 ENSMUST00000164541.2 |
||
| CDS-3UTR GCA 90 bp | CTTTTCAGGTGTGTGCTACCAAGTGCAGAATTGTCACAACATTTACTGATGCAGTCCTCTTTGTTAAACTaGTTCTCCCAGTTTCCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: LFRCVLPSAELSQHLLMQSSLLN*FSQFPL Trigger: CAAAGGAAACTGGGAGAAGCAGTTTAACAAAGAGGA...CTGCATCAGTAAATGTTGTGACAATTCTGCACTTGGTAGCACACACCTGAAAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017184.10 ENSMUST00000110293.9 ENSMUST00000164541.2 |
||
| CDS-3UTR GCA 90 bp | AGGATGAAGGGTGCTCACTTGGATAAAGTTTATCTCATGATGGTTCACAGTGTGTCCTCTTTGTTAAACTaGTTCTCCCAGTTTCCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: RMKGAHLDKVYLMMVHSVSSLLN*FSQFPL Trigger: CAAAGGAAACTGGGAGAAGCAGTTTAACAAAGAGGA...CACACTGTGAACCATCATGAGATAAACTTTATCCAAGTGAGCACCCTTCATCCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017184.10 ENSMUST00000110293.9 ENSMUST00000164541.2 |
||
| CDS-3UTR CCA 90 bp | AATCATGAGAAAAAGAATGGGCAAAGGCAGTGGCCTGACACCACAGCATCCTTTTTCAATGTGTTCATCTaGAAGCATGATGATCATGTT | + |
|
Preference number: 4 (lower is better) Translates to: NHEKKNGQRQWPDTTASFFNVFI*KHDDHV Trigger: AACATGATCATCATGCTTCCAGATGAACACATTGAA...AAAGGATGCTGTGGTGTCAGGCCACTGCCTTTGCCCATTCTTTTTCTCATGATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000110293.9 ENSMUST00000164541.2 |
||
| CDS-3UTR TCA 90 bp | TTCTCTCACCTTCATCTGCTAAATGTTAGCTTTTCAGGTGTGTGCTACCAAGTGGCCTCGTCCACTCTATaGATTTCTTATAAGTTATCT | + |
|
Preference number: 4 (lower is better) Translates to: FSHLHLLNVSFSGVCYQVASSTL*ISYKLS Trigger: AGATAACTTATAAGAAATTCATAGAGTGGACGAGGC...CACTTGGTAGCACACACCTGAAAAGCTAACATTTAGCAGATGAAGGTGAGAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110293.9 ENSMUST00000164541.2 |
||
| CDS-3UTR TCA 90 bp | CTTTTCAGGTGTGTGCTACCAAGTGCAGAATTGTCACAACATTTACTGATGCAGGCCTCGTCCACTCTATaGATTTCTTATAAGTTATCT | + |
|
Preference number: 4 (lower is better) Translates to: LFRCVLPSAELSQHLLMQASSTL*ISYKLS Trigger: AGATAACTTATAAGAAATTCATAGAGTGGACGAGGC...CTGCATCAGTAAATGTTGTGACAATTCTGCACTTGGTAGCACACACCTGAAAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110293.9 ENSMUST00000164541.2 |
||
| CDS-3UTR CCA 90 bp | ACAGAAGCCCCAACTATGTTCTGCAGCTTCCAGAACTGTAAACAAAATACTATTAGAAAAGTACATTTCTaGAGCTGTCTTCACCCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: TEAPTMFCSFQNCKQNTIRKVHF*SCLHPV Trigger: CACTGGGTGAAGACAGCTCCAGAAATGTACTTTTCT...AATAGTATTTTGTTTACAGTTCTGGAAGCTGCAGAACATAGTTGGGGCTTCTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000017184.10 ENSMUST00000110293.9 |
||
| CDS-3UTR TCA 90 bp | TTCTTCTTCCATCTTGTCCAGCCTCGTCCACTCTATGAATTTCTTATAAGTTATGGAGACGCTTATAGGTaGGAAAAGTACATTTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: FFFHLVQPRPLYEFLISYGDAYR*EKYISG Trigger: TCCAGAAATGTACTTTTCTCACCTATAAGCGTCTCC...ATAACTTATAAGAAATTCATAGAGTGGACGAGGCTGGACAAGATGGAAGAAGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017184.10 |
||
| CDS-3UTR CCA 90 bp | ACAGAAGCCCCAACTATGTTCTGCAGCTTCCAGAACTGTAAACAAAATACTATTTTCAATGTGTTCATCTaGAAGCATGATGATCATGTT | + |
|
Preference number: 4 (lower is better) Translates to: TEAPTMFCSFQNCKQNTIFNVFI*KHDDHV Trigger: AACATGATCATCATGCTTCCAGATGAACACATTGAA...AATAGTATTTTGTTTACAGTTCTGGAAGCTGCAGAACATAGTTGGGGCTTCTGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000110293.9 ENSMUST00000164541.2 |
||
| 3UTR CAA 72 bp | ATAAGGAATCTGAAACTTATATACTGCTCAACACTCTaGCATGATCCTGTTTTTGTGAAACCATTTTCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: IRNLKLIYCSTL*HDPVFVKPFSL Trigger: CAGGGAAAATGGTTTCACAAAAACAGGATCATGCAAGAGTGTTGAGCAGTATATAAGTTTCAGATTCCTTAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000017184.10 ENSMUST00000110293.9 ENSMUST00000164541.2 |
||
| CDS GCA 90 bp | TCTTCTGTCTTTTTGGCTACCCAGGCGTTGATGTGCTGTCGGGACTaGTCTGTAGCACCCTTAAAGTCCAGCTCTTCCATCTCTGCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: SSVFLATQALMCCRD*SVAPLKSSSSISAS Trigger: TGAAGCAGAGATGGAAGAGCTGGACTTTAAGGGTGCTACAGAGCAGTCCCGACAGCACATCAACGCCTGGGTAGCCAAAAAGACAGAAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000017184.10 ENSMUST00000110293.9 |
||
| CDS-3UTR CAA 90 bp | CTTTCTCATGGGGAGGAGAACCGACCACAGAACACAATCCCACTGGTCCTGCTGACATCTCTACCTCCTTaGCCACTGCATTTATCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: LSHGEENRPQNTIPLVLLTSLPP*PLHLSK Trigger: TTTGGATAAATGCAGTGGCAAAGGAGGTAGAGATGT...CAGCAGGACCAGTGGGATTGTGTTCTGTGGTCGGTTCTCCTCCCCATGAGAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017184.10 |
||
| CDS-3UTR CAA 90 bp | CTTTCTCATGGGGAGGAGAACCGACCACAGAACACAATCCCACTGGTCCTGCTGCTTCTGAAACATCATTaGCACAGGTTTCACCACATC | + |
|
Preference number: 5 (lower is better) Translates to: LSHGEENRPQNTIPLVLLLLKHH*HRFHHI Trigger: GATGTGGTGAAACCTGTGCAAATGATGTTTCAGAAG...CAGCAGGACCAGTGGGATTGTGTTCTGTGGTCGGTTCTCCTCCCCATGAGAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017184.10 |
||
| CDS GCA 90 bp | TCTGTAATTTTATCTTCTGTCTTTTTGGCTACCCAGGCGTTGATGTaGTGTCGGGACTGCTCTGTAGCACCCTTAAAGTCCAGCTCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: SVILSSVFLATQALM*CRDCSVAPLKSSSS Trigger: GGAAGAGCTGGACTTTAAGGGTGCTACAGAGCAGTCCCGACAGCACATCAACGCCTGGGTAGCCAAAAAGACAGAAGATAAAATTACAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000017184.10 ENSMUST00000110293.9 ENSMUST00000164541.2 |
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| CDS CCA 90 bp | GTGCCAGTCTTGTTCGTTTCTGTGAGAAGTGATTGGAATCCCTGGTaGACATCTCTACCTCCTTTGCCACTGCATTTATCCAAAGACAGT | + |
|
Preference number: 5 (lower is better) Translates to: VPVLFVSVRSDWNPW*TSLPPLPLHLSKDS Trigger: ACTGTCTTTGGATAAATGCAGTGGCAAAGGAGGTAGAGATGTCCACCAGGGATTCCAATCACTTCTCACAGAAACGAACAAGACTGGCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017184.10 ENSMUST00000110293.9 |
||
| CDS CCA 90 bp | TGTGTGCCAGTCTTGTTCGTTTCTGTGAGAAGTGATTGGAATCCCTaGTGGACATCTCTACCTCCTTTGCCACTGCATTTATCCAAAGAC | + |
|
Preference number: 5 (lower is better) Translates to: CVPVLFVSVRSDWNP*WTSLPPLPLHLSKD Trigger: GTCTTTGGATAAATGCAGTGGCAAAGGAGGTAGAGATGTCCACCAGGGATTCCAATCACTTCTCACAGAAACGAACAAGACTGGCACACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017184.10 ENSMUST00000110293.9 |
||
| CDS-3UTR CAA 90 bp | TCTCACCTTCATCTGCTAAATGTTAGCTTTTCAGGTGTGTGCTACCAAGTGCAGAGGCAAAAGTGGCATTaGCTTCCAGCAGTGGATCCA | + |
|
Preference number: 5 (lower is better) Translates to: SHLHLLNVSFSGVCYQVQRQKWH*LPAVDP Trigger: TGGATCCACTGCTGGAAGCAAATGCCACTTTTGCCT...CTGCACTTGGTAGCACACACCTGAAAAGCTAACATTTAGCAGATGAAGGTGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017184.10 ENSMUST00000110293.9 |
||
| CDS-3UTR CAA 90 bp | AGGATGAAGGGTGCTCACTTGGATAAAGTTTATCTCATGATGGTTCACAGTGTGAGGCAAAAGTGGCATTaGCTTCCAGCAGTGGATCCA | + |
|
Preference number: 5 (lower is better) Translates to: RMKGAHLDKVYLMMVHSVRQKWH*LPAVDP Trigger: TGGATCCACTGCTGGAAGCAAATGCCACTTTTGCCT...CACACTGTGAACCATCATGAGATAAACTTTATCCAAGTGAGCACCCTTCATCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017184.10 ENSMUST00000110293.9 |
||
| CDS-3UTR CAA 90 bp | TTCTCTCACCTTCATCTGCTAAATGTTAGCTTTTCAGGTGTGTGCTACCAAGTGCACCTAAAACCTATATaGGCTGCAGTGGCAGCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: FSHLHLLNVSFSGVCYQVHLKPI*AAVAAA Trigger: TGCAGCTGCCACTGCAGCCAATATAGGTTTTAGGTG...CACTTGGTAGCACACACCTGAAAAGCTAACATTTAGCAGATGAAGGTGAGAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110293.9 ENSMUST00000164541.2 |
||
| CDS-3UTR CAA 90 bp | ACACTCTTGCATGATCCTGTTTTTGTGAAACCATTTTCCCTGGAACTGTACAGACACCTAAAACCTATATaGGCTGCAGTGGCAGCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: TLLHDPVFVKPFSLELYRHLKPI*AAVAAA Trigger: TGCAGCTGCCACTGCAGCCAATATAGGTTTTAGGTG...TCTGTACAGTTCCAGGGAAAATGGTTTCACAAAAACAGGATCATGCAAGAGTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000110293.9 ENSMUST00000164541.2 |
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| CDS TCA 90 bp | GTTTCACCACATCCACTCACCTTGGTGACATTGAAAGGCATTTCTTaGGTGTCCTCTTTGTTAAACTGCTTCTCCCAGTTTCCTTTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: VSPHPLTLVTLKGIS*VSSLLNCFSQFPLK Trigger: CTTCAAAGGAAACTGGGAGAAGCAGTTTAACAAAGAGGACACTCAAGAAATGCCTTTCAATGTCACCAAGGTGAGTGGATGTGGTGAAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017184.10 |
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| CDS-3UTR CAA 90 bp | TTCTCTCACCTTCATCTGCTAAATGTTAGCTTTTCAGGTGTGTGCTACCAAGTGTACTGTGTGCCAGTCTaGTTCGTTTCTGTGAGAAGT | + |
|
Preference number: 5 (lower is better) Translates to: FSHLHLLNVSFSGVCYQVYCVPV*FVSVRS Trigger: ACTTCTCACAGAAACGAACAAGACTGGCACACAGTA...CACTTGGTAGCACACACCTGAAAAGCTAACATTTAGCAGATGAAGGTGAGAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017184.10 ENSMUST00000110293.9 |
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| CDS-3UTR CAA 90 bp | CTTTTCAGGTGTGTGCTACCAAGTGCAGAATTGTCACAACATTTACTGATGCAGTTATCTTCTGTCTTTTaGGCTACCCAGGCGTTGATG | + |
|
Preference number: 5 (lower is better) Translates to: LFRCVLPSAELSQHLLMQLSSVF*ATQALM Trigger: CATCAACGCCTGGGTAGCCAAAAAGACAGAAGATAA...CTGCATCAGTAAATGTTGTGACAATTCTGCACTTGGTAGCACACACCTGAAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000017184.10 ENSMUST00000110293.9 ENSMUST00000164541.2 |
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| CDS-3UTR CAA 90 bp | TTTCAGGTGTGTGCTACCAAGTGCAGAATTGTCACAACATTTACTGATGCAGACTTATCTTCTGTCTTTTaGGCTACCCAGGCGTTGATG | + |
|
Preference number: 5 (lower is better) Translates to: FQVCATKCRIVTTFTDADLSSVF*ATQALM Trigger: CATCAACGCCTGGGTAGCCAAAAAGACAGAAGATAA...GTCTGCATCAGTAAATGTTGTGACAATTCTGCACTTGGTAGCACACACCTGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017184.10 ENSMUST00000110293.9 ENSMUST00000164541.2 |
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| CDS-3UTR CAA 90 bp | ACACTCTTGCATGATCCTGTTTTTGTGAAACCATTTTCCCTGGAACTGTACAGACCACATCCACTCACCTaGGTGACATTGAAAGGCATT | + |
|
Preference number: 5 (lower is better) Translates to: TLLHDPVFVKPFSLELYRPHPLT*VTLKGI Trigger: AATGCCTTTCAATGTCACCAAGGTGAGTGGATGTGG...TCTGTACAGTTCCAGGGAAAATGGTTTCACAAAAACAGGATCATGCAAGAGTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017184.10 |
||
| CDS-3UTR CAA 90 bp | AGGATGAAGGGTGCTCACTTGGATAAAGTTTATCTCATGATGGTTCACAGTGTGGGAAGCAACAGAATGTaGGTGGATATCTCTTCCACA | + |
|
Preference number: 5 (lower is better) Translates to: RMKGAHLDKVYLMMVHSVGSNRM*VDISST Trigger: TGTGGAAGAGATATCCACCAACATTCTGTTGCTTCC...CACACTGTGAACCATCATGAGATAAACTTTATCCAAGTGAGCACCCTTCATCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110293.9 ENSMUST00000164541.2 |
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| CDS-3UTR CAA 90 bp | CTTTTCAGGTGTGTGCTACCAAGTGCAGAATTGTCACAACATTTACTGATGCAGGGAAGCAACAGAATGTaGGTGGATATCTCTTCCACA | + |
|
Preference number: 5 (lower is better) Translates to: LFRCVLPSAELSQHLLMQGSNRM*VDISST Trigger: TGTGGAAGAGATATCCACCAACATTCTGTTGCTTCC...CTGCATCAGTAAATGTTGTGACAATTCTGCACTTGGTAGCACACACCTGAAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110293.9 ENSMUST00000164541.2 |
||
| CDS-3UTR CAA 90 bp | ACACTCTTGCATGATCCTGTTTTTGTGAAACCATTTTCCCTGGAACTGTACAGATTATCTTCTGTCTTTTaGGCTACCCAGGCGTTGATG | + |
|
Preference number: 5 (lower is better) Translates to: TLLHDPVFVKPFSLELYRLSSVF*ATQALM Trigger: CATCAACGCCTGGGTAGCCAAAAAGACAGAAGATAA...TCTGTACAGTTCCAGGGAAAATGGTTTCACAAAAACAGGATCATGCAAGAGTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000017184.10 ENSMUST00000110293.9 ENSMUST00000164541.2 |
||
| CDS-3UTR CAA 90 bp | TTCTCTCACCTTCATCTGCTAAATGTTAGCTTTTCAGGTGTGTGCTACCAAGTGCTTCTGAAACATCATTaGCACAGGTTTCACCACATC | + |
|
Preference number: 5 (lower is better) Translates to: FSHLHLLNVSFSGVCYQVLLKHH*HRFHHI Trigger: GATGTGGTGAAACCTGTGCAAATGATGTTTCAGAAG...CACTTGGTAGCACACACCTGAAAAGCTAACATTTAGCAGATGAAGGTGAGAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017184.10 ENSMUST00000110293.9 ENSMUST00000164541.2 |
||
| CDS-3UTR CAA 90 bp | AGGATGAAGGGTGCTCACTTGGATAAAGTTTATCTCATGATGGTTCACAGTGTGCTTCTGAAACATCATTaGCACAGGTTTCACCACATC | + |
|
Preference number: 5 (lower is better) Translates to: RMKGAHLDKVYLMMVHSVLLKHH*HRFHHI Trigger: GATGTGGTGAAACCTGTGCAAATGATGTTTCAGAAG...CACACTGTGAACCATCATGAGATAAACTTTATCCAAGTGAGCACCCTTCATCCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017184.10 ENSMUST00000110293.9 ENSMUST00000164541.2 |
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| CDS-3UTR CAA 90 bp | ACACTCTTGCATGATCCTGTTTTTGTGAAACCATTTTCCCTGGAACTGTACAGAACATCTCTACCTCCTTaGCCACTGCATTTATCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: TLLHDPVFVKPFSLELYRTSLPP*PLHLSK Trigger: TTTGGATAAATGCAGTGGCAAAGGAGGTAGAGATGT...TCTGTACAGTTCCAGGGAAAATGGTTTCACAAAAACAGGATCATGCAAGAGTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000017184.10 ENSMUST00000110293.9 |
||
| CDS TCA 72 bp | CCTCCTTTGCCACTGCATTTATCCAAAGACAGTGCCTaGGCCATCTGGCTTGCAGTAGTTCCTTTTGCCCCC | + |
|
Preference number: 6 (lower is better) Translates to: PPLPLHLSKDSA*AIWLAVVPFAP Trigger: GGGGGCAAAAGGAACTACTGCAAGCCAGATGGCTCAGGCACTGTCTTTGGATAAATGCAGTGGCAAAGGAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017184.10 ENSMUST00000110293.9 |
||
| CDS GCA 72 bp | GGAATCCCTGGTGGACATCTCTACCTCCTTTGCCACTaGATTTATCCAAAGACAGTGCCTGAGCCATCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: GIPGGHLYLLCH*IYPKTVPEPSG Trigger: GCCAGATGGCTCAGGCACTGTCTTTGGATAAATGCAGTGGCAAAGGAGGTAGAGATGTCCACCAGGGATTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017184.10 ENSMUST00000110293.9 |
||
| CDS GCA 72 bp | GTGATTGGAATCCCTGGTGGACATCTCTACCTCCTTTaGCACTGCATTTATCCAAAGACAGTGCCTGAGCCA | + |
|
Preference number: 6 (lower is better) Translates to: VIGIPGGHLYLL*HCIYPKTVPEP Trigger: TGGCTCAGGCACTGTCTTTGGATAAATGCAGTGGCAAAGGAGGTAGAGATGTCCACCAGGGATTCCAATCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017184.10 ENSMUST00000110293.9 |
||
| CDS GCA 72 bp | TTATCTTCTGTCTTTTTGGCTACCCAGGCGTTGATGTaGTGTCGGGACTGCTCTGTAGCACCCTTAAAGTCC | + |
|
Preference number: 6 (lower is better) Translates to: LSSVFLATQALM*CRDCSVAPLKS Trigger: GGACTTTAAGGGTGCTACAGAGCAGTCCCGACAGCACATCAACGCCTGGGTAGCCAAAAAGACAGAAGATAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000017184.10 ENSMUST00000110293.9 ENSMUST00000164541.2 |
||
| CDS GCA 72 bp | TCTACCTCCTTTGCCACTGCATTTATCCAAAGACAGTaGCTGAGCCATCTGGCTTGCAGTAGTTCCTTTTGC | + |
|
Preference number: 6 (lower is better) Translates to: STSFATAFIQRQ*LSHLACSSSFC Trigger: GCAAAAGGAACTACTGCAAGCCAGATGGCTCAGGCACTGTCTTTGGATAAATGCAGTGGCAAAGGAGGTAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017184.10 ENSMUST00000110293.9 |
||
| CDS CAA 72 bp | CTGTTGGCTGTTCTGAGCACATACTGTGTGCCAGTCTaGTTCGTTTCTGTGAGAAGTGATTGGAATCCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: LLAVLSTYCVPV*FVSVRSDWNPW Trigger: CCAGGGATTCCAATCACTTCTCACAGAAACGAACAAGACTGGCACACAGTATGTGCTCAGAACAGCCAACAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017184.10 ENSMUST00000110293.9 |
||
| CDS CAA 72 bp | GTAATTTTATCTTCTGTCTTTTTGGCTACCCAGGCGTaGATGTGCTGTCGGGACTGCTCTGTAGCACCCTTA | + |
|
Preference number: 6 (lower is better) Translates to: VILSSVFLATQA*MCCRDCSVAPL Trigger: TAAGGGTGCTACAGAGCAGTCCCGACAGCACATCAACGCCTGGGTAGCCAAAAAGACAGAAGATAAAATTAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000017184.10 ENSMUST00000110293.9 ENSMUST00000164541.2 |
||
| CDS CCA 72 bp | TTGTTCGTTTCTGTGAGAAGTGATTGGAATCCCTGGTaGACATCTCTACCTCCTTTGCCACTGCATTTATCC | + |
|
Preference number: 6 (lower is better) Translates to: LFVSVRSDWNPW*TSLPPLPLHLS Trigger: GGATAAATGCAGTGGCAAAGGAGGTAGAGATGTCCACCAGGGATTCCAATCACTTCTCACAGAAACGAACAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017184.10 ENSMUST00000110293.9 |
||
| CDS CCA 72 bp | GTCTTGTTCGTTTCTGTGAGAAGTGATTGGAATCCCTaGTGGACATCTCTACCTCCTTTGCCACTGCATTTA | + |
|
Preference number: 6 (lower is better) Translates to: VLFVSVRSDWNP*WTSLPPLPLHL Trigger: TAAATGCAGTGGCAAAGGAGGTAGAGATGTCCACCAGGGATTCCAATCACTTCTCACAGAAACGAACAAGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017184.10 ENSMUST00000110293.9 |
||
| CDS CAA 90 bp | GGTTTCACCACATCCACTCACCTTGGTGACATTGAAAGGCATTTCTaGAGTGTCCTCTTTGTTAAACTGCTTCTCCCAGTTTCCTTTGAA | + |
|
Preference number: 6 (lower is better) Translates to: GFTTSTHLGDIERHF*SVLFVKLLLPVSFE Trigger: TTCAAAGGAAACTGGGAGAAGCAGTTTAACAAAGAGGACACTCAAGAAATGCCTTTCAATGTCACCAAGGTGAGTGGATGTGGTGAAACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017184.10 |
||
| CDS TCA 72 bp | CATCCACTCACCTTGGTGACATTGAAAGGCATTTCTTaGGTGTCCTCTTTGTTAAACTGCTTCTCCCAGTTT | + |
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Preference number: 6 (lower is better) Translates to: HPLTLVTLKGIS*VSSLLNCFSQF Trigger: AAACTGGGAGAAGCAGTTTAACAAAGAGGACACTCAAGAAATGCCTTTCAATGTCACCAAGGTGAGTGGATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017184.10 |
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| CDS CAA 72 bp | ACATCCACTCACCTTGGTGACATTGAAAGGCATTTCTaGAGTGTCCTCTTTGTTAAACTGCTTCTCCCAGTT | + |
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Preference number: 6 (lower is better) Translates to: TSTHLGDIERHF*SVLFVKLLLPV Trigger: AACTGGGAGAAGCAGTTTAACAAAGAGGACACTCAAGAAATGCCTTTCAATGTCACCAAGGTGAGTGGATGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017184.10 |
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