Pregenerated sensors for SERPINB5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000067006Ensembl transcript IDs: ENSMUST00000086701.13, ENSMUST00000112729.3, ENSMUST00000112730.8, ENSMUST00000188745.3
Found 130 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | AGGGACCTTGTGATCTGGTTAGAAGCCTGCCAGCAACAACATTGCCCAAATGACATGTGGACTGCTTCCTaGTTCAGCAACATTTACAAT | + |
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Preference number: 2 (lower is better) Translates to: RDLVIWLEACQQQHCPNDMWTAS*FSNIYN Trigger: ATTGTAAATGTTGCTGAATCAGGAAGCAGTCCACAT...GTCATTTGGGCAATGTTGTTGCTGGCAGGCTTCTAACCAGATCACAAGGTCCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086701.13 ENSMUST00000112729.3 ENSMUST00000112730.8 |
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| 3UTR-3UTR GCA 90 bp | AGGGACCTTGTGATCTGGTTAGAAGCCTGCCAGCAACAACATTGCCCAAATGACATGACAAATGTGGACTaGTTCCTGATTCAGCAACAT | + |
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Preference number: 2 (lower is better) Translates to: RDLVIWLEACQQQHCPNDMTNVD*FLIQQH Trigger: ATGTTGCTGAATCAGGAAGCAGTCCACATTTGTCAT...GTCATTTGGGCAATGTTGTTGCTGGCAGGCTTCTAACCAGATCACAAGGTCCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086701.13 ENSMUST00000112729.3 ENSMUST00000112730.8 |
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| 3UTR-3UTR GCA 90 bp | AGGGACCTTGTGATCTGGTTAGAAGCCTGCCAGCAACAACATTGCCCAAATGACTCCTCCCTTGAAGACTaGATTTTTATCCATAGCTCT | + |
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Preference number: 2 (lower is better) Translates to: RDLVIWLEACQQQHCPNDSSLED*IFIHSS Trigger: AGAGCTATGGATAAAAATGCAGTCTTCAAGGGAGGA...GTCATTTGGGCAATGTTGTTGCTGGCAGGCTTCTAACCAGATCACAAGGTCCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000086701.13 ENSMUST00000112729.3 ENSMUST00000112730.8 |
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| 3UTR-3UTR TCA 90 bp | ACATTCTTTATCTCAGTAATGCAGAGCCCTGAGAATAATGTCCCCCACATCATCTGTGAAGGTTACATATaGCAAATGTGGACTGCTTCC | + |
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Preference number: 2 (lower is better) Translates to: TFFISVMQSPENNVPHIICEGYI*QMWTAS Trigger: GGAAGCAGTCCACATTTGTCATATGTAACCTTCACA...GATGATGTGGGGGACATTATTCTCAGGGCTCTGCATTACTGAGATAAAGAATGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000086701.13 ENSMUST00000112729.3 ENSMUST00000112730.8 |
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| 3UTR-3UTR TCA 90 bp | ACATTCTTTATCTCAGTAATGCAGAGCCCTGAGAATAATGTCCCCCACATCATCATGTGGACTGCTTCCTaGTTCAGCAACATTTACAAT | + |
|
Preference number: 2 (lower is better) Translates to: TFFISVMQSPENNVPHIIMWTAS*FSNIYN Trigger: ATTGTAAATGTTGCTGAATCAGGAAGCAGTCCACAT...GATGATGTGGGGGACATTATTCTCAGGGCTCTGCATTACTGAGATAAAGAATGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000086701.13 ENSMUST00000112729.3 ENSMUST00000112730.8 |
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| 3UTR-3UTR GCA 90 bp | ACATTCTTTATCTCAGTAATGCAGAGCCCTGAGAATAATGTCCCCCACATCATCATGACAAATGTGGACTaGTTCCTGATTCAGCAACAT | + |
|
Preference number: 2 (lower is better) Translates to: TFFISVMQSPENNVPHIIMTNVD*FLIQQH Trigger: ATGTTGCTGAATCAGGAAGCAGTCCACATTTGTCAT...GATGATGTGGGGGACATTATTCTCAGGGCTCTGCATTACTGAGATAAAGAATGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000086701.13 ENSMUST00000112729.3 ENSMUST00000112730.8 |
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| 3UTR-3UTR GCA 90 bp | ACATTCTTTATCTCAGTAATGCAGAGCCCTGAGAATAATGTCCCCCACATCATCTCCTCCCTTGAAGACTaGATTTTTATCCATAGCTCT | + |
|
Preference number: 2 (lower is better) Translates to: TFFISVMQSPENNVPHIISSLED*IFIHSS Trigger: AGAGCTATGGATAAAAATGCAGTCTTCAAGGGAGGA...GATGATGTGGGGGACATTATTCTCAGGGCTCTGCATTACTGAGATAAAGAATGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000086701.13 ENSMUST00000112729.3 ENSMUST00000112730.8 |
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| 3UTR-3UTR TCA 90 bp | AAAAGGTACTTGGTGAACCCTATACTCTTGTTCTTAAGAGTTGAAGGAAGTGGATGTGAAGGTTACATATaGCAAATGTGGACTGCTTCC | + |
|
Preference number: 2 (lower is better) Translates to: KRYLVNPILLFLRVEGSGCEGYI*QMWTAS Trigger: GGAAGCAGTCCACATTTGTCATATGTAACCTTCACA...TCCACTTCCTTCAACTCTTAAGAACAAGAGTATAGGGTTCACCAAGTACCTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086701.13 ENSMUST00000112729.3 ENSMUST00000112730.8 |
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| 3UTR CAA 90 bp | GTTCCTCCCTTGAAGACTGCATTTTTATCCATAGCTCTGAATGCTTaGACAAATGAAGAGCACATATTTTCTAAAGTGATTCCCTTTCCC | + |
|
Preference number: 2 (lower is better) Translates to: VPPLKTAFLSIALNA*TNEEHIFSKVIPFP Trigger: GGGAAAGGGAATCACTTTAGAAAATATGTGCTCTTCATTTGTCAAAGCATTCAGAGCTATGGATAAAAATGCAGTCTTCAAGGGAGGAAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000086701.13 ENSMUST00000112729.3 ENSMUST00000112730.8 |
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| 3UTR-3UTR TCA 90 bp | GTGGAGATCTCTAGAACATTCTTTATCTCAGTAATGCAGAGCCCTGAGAATAATATGTGGACTGCTTCCTaGTTCAGCAACATTTACAAT | + |
|
Preference number: 2 (lower is better) Translates to: VEISRTFFISVMQSPENNMWTAS*FSNIYN Trigger: ATTGTAAATGTTGCTGAATCAGGAAGCAGTCCACAT...ATTATTCTCAGGGCTCTGCATTACTGAGATAAAGAATGTTCTAGAGATCTCCAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086701.13 ENSMUST00000112729.3 ENSMUST00000112730.8 |
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| 3UTR-3UTR GCA 90 bp | AAAAGGTACTTGGTGAACCCTATACTCTTGTTCTTAAGAGTTGAAGGAAGTGGAATGACAAATGTGGACTaGTTCCTGATTCAGCAACAT | + |
|
Preference number: 2 (lower is better) Translates to: KRYLVNPILLFLRVEGSGMTNVD*FLIQQH Trigger: ATGTTGCTGAATCAGGAAGCAGTCCACATTTGTCAT...TCCACTTCCTTCAACTCTTAAGAACAAGAGTATAGGGTTCACCAAGTACCTTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086701.13 ENSMUST00000112729.3 ENSMUST00000112730.8 |
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| 3UTR CCA 72 bp | GTTGCTGGCGCTGGAGATGTCAGGGACCTTGTGATCTaGTTAGAAGCCTGCCAGCAACAACATTGCCCAAAT | + |
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Preference number: 3 (lower is better) Translates to: VAGAGDVRDLVI*LEACQQQHCPN Trigger: ATTTGGGCAATGTTGTTGCTGGCAGGCTTCTAACCAGATCACAAGGTCCCTGACATCTCCAGCGCCAGCAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086701.13 ENSMUST00000112729.3 ENSMUST00000112730.8 |
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| 3UTR TCA 72 bp | CTGGTTAGAAGCCTGCCAGCAACAACATTGCCCAAATaGCCACATGGGAGATCTAGGAAAAATGAAAGCCAA | + |
|
Preference number: 3 (lower is better) Translates to: LVRSLPATTLPK*PHGRSRKNESQ Trigger: TTGGCTTTCATTTTTCCTAGATCTCCCATGTGGTCATTTGGGCAATGTTGTTGCTGGCAGGCTTCTAACCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000086701.13 ENSMUST00000112729.3 ENSMUST00000112730.8 |
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| 3UTR GCA 72 bp | CCACATCATCCCTATAGAAGTTCCTCCCTTGAAGACTaGATTTTTATCCATAGCTCTGAATGCTTTGACAAA | + |
|
Preference number: 3 (lower is better) Translates to: PHHPYRSSSLED*IFIHSSECFDK Trigger: TTTGTCAAAGCATTCAGAGCTATGGATAAAAATGCAGTCTTCAAGGGAGGAACTTCTATAGGGATGATGTGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000086701.13 ENSMUST00000112729.3 ENSMUST00000112730.8 |
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| 3UTR-3UTR CAA 90 bp | AAAAGGTACTTGGTGAACCCTATACTCTTGTTCTTAAGAGTTGAAGGAAGTGGAATAGCTCTGAATGCTTaGACAAATGAAGAGCACATA | + |
|
Preference number: 3 (lower is better) Translates to: KRYLVNPILLFLRVEGSGIALNA*TNEEHI Trigger: TATGTGCTCTTCATTTGTCAAAGCATTCAGAGCTAT...TCCACTTCCTTCAACTCTTAAGAACAAGAGTATAGGGTTCACCAAGTACCTTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086701.13 ENSMUST00000112729.3 ENSMUST00000112730.8 |
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| 3UTR-3UTR CAA 90 bp | GTGGAGATCTCTAGAACATTCTTTATCTCAGTAATGCAGAGCCCTGAGAATAATATAGCTCTGAATGCTTaGACAAATGAAGAGCACATA | + |
|
Preference number: 3 (lower is better) Translates to: VEISRTFFISVMQSPENNIALNA*TNEEHI Trigger: TATGTGCTCTTCATTTGTCAAAGCATTCAGAGCTAT...ATTATTCTCAGGGCTCTGCATTACTGAGATAAAGAATGTTCTAGAGATCTCCAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086701.13 ENSMUST00000112729.3 ENSMUST00000112730.8 |
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| 3UTR TCA 72 bp | GTACTTGGTGAACCCTATACTCTTGTTCTTAAGAGTTaGAGGAAGTGGAGATCTCTAGAACATTCTTTATCT | + |
|
Preference number: 3 (lower is better) Translates to: VLGEPYTLVLKS*RKWRSLEHSLS Trigger: AGATAAAGAATGTTCTAGAGATCTCCACTTCCTTCAACTCTTAAGAACAAGAGTATAGGGTTCACCAAGTAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086701.13 ENSMUST00000112729.3 ENSMUST00000112730.8 |
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| 3UTR-3UTR CAA 90 bp | CAGAATTCTTTATCCAACACTCCAAGATCTAGAATGTTCTTCAAAGTGTTTCCAATAGAAGTTCCTCCCTaGAAGACTGCATTTTTATCC | + |
|
Preference number: 3 (lower is better) Translates to: QNSLSNTPRSRMFFKVFPIEVPP*KTAFLS Trigger: GGATAAAAATGCAGTCTTCAAGGGAGGAACTTCTAT...TGGAAACACTTTGAAGAACATTCTAGATCTTGGAGTGTTGGATAAAGAATTCTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000086701.13 ENSMUST00000112729.3 ENSMUST00000112730.8 |
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| 3UTR TCA 72 bp | AGGTTTAACATGGAGACTTCTAGACCTACAGTATTGTaGCATGTACACAAATTCACTTTAAAAAGGTACTTG | + |
|
Preference number: 3 (lower is better) Translates to: RFNMETSRPTVL*HVHKFTLKRYL Trigger: CAAGTACCTTTTTAAAGTGAATTTGTGTACATGTCACAATACTGTAGGTCTAGAAGTCTCCATGTTAAACCT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000086701.13 ENSMUST00000112729.3 ENSMUST00000112730.8 |
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| CDS-3UTR CCA 90 bp | AGGGACCTTGTGATCTGGTTAGAAGCCTGCCAGCAACAACATTGCCCAAATGACACCCTGGCACCTCGATaGACTCACCACCATCTTCGG | + |
|
Preference number: 4 (lower is better) Translates to: RDLVIWLEACQQQHCPNDTLAPR*THHHLR Trigger: CCGAAGATGGTGGTGAGTCCATCGAGGTGCCAGGGT...GTCATTTGGGCAATGTTGTTGCTGGCAGGCTTCTAACCAGATCACAAGGTCCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086701.13 ENSMUST00000112729.3 ENSMUST00000112730.8 |
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| CDS-3UTR CCA 90 bp | AGGGACCTTGTGATCTGGTTAGAAGCCTGCCAGCAACAACATTGCCCAAATGACTCTTCTCCAGGCCTGTaGACTCATCCTCCACGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RDLVIWLEACQQQHCPNDSSPGL*THPPRP Trigger: AGGACGTGGAGGATGAGTCCACAGGCCTGGAGAAGA...GTCATTTGGGCAATGTTGTTGCTGGCAGGCTTCTAACCAGATCACAAGGTCCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086701.13 ENSMUST00000112729.3 ENSMUST00000112730.8 |
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| CDS-3UTR TCA 90 bp | AGGGACCTTGTGATCTGGTTAGAAGCCTGCCAGCAACAACATTGCCCAAATGACTTGGGAGGGAAAGTTTaGCTTTGGCATTGGCCATGG | + |
|
Preference number: 4 (lower is better) Translates to: RDLVIWLEACQQQHCPNDLGGKV*LWHWPW Trigger: CCATGGCCAATGCCAAAGTCAAACTTTCCCTCCCAA...GTCATTTGGGCAATGTTGTTGCTGGCAGGCTTCTAACCAGATCACAAGGTCCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086701.13 ENSMUST00000112729.3 ENSMUST00000112730.8 |
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| CDS-3UTR TCA 90 bp | AGGGACCTTGTGATCTGGTTAGAAGCCTGCCAGCAACAACATTGCCCAAATGACCACTCCCTTGGTCTCTaGCATTCCAGAGAAATCCGA | + |
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Preference number: 4 (lower is better) Translates to: RDLVIWLEACQQQHCPNDHSLGL*HSREIR Trigger: TCGGATTTCTCTGGAATGTCAGAGACCAAGGGAGTG...GTCATTTGGGCAATGTTGTTGCTGGCAGGCTTCTAACCAGATCACAAGGTCCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086701.13 ENSMUST00000112729.3 ENSMUST00000112730.8 |
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| CDS-3UTR CCA 90 bp | AGGGACCTTGTGATCTGGTTAGAAGCCTGCCAGCAACAACATTGCCCAAATGACCATTGGCCATGGTACTaGGGTTGGTCCACTGTAACA | + |
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Preference number: 4 (lower is better) Translates to: RDLVIWLEACQQQHCPNDHWPWY*GWSTVT Trigger: TGTTACAGTGGACCAACCCCAGTACCATGGCCAATG...GTCATTTGGGCAATGTTGTTGCTGGCAGGCTTCTAACCAGATCACAAGGTCCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086701.13 ENSMUST00000112729.3 ENSMUST00000112730.8 |
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| CDS-3UTR CCA 90 bp | AGGGACCTTGTGATCTGGTTAGAAGCCTGCCAGCAACAACATTGCCCAAATGACACAGGGACACTCCCTTaGTCTCTGACATTCCAGAGA | + |
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Preference number: 4 (lower is better) Translates to: RDLVIWLEACQQQHCPNDTGTLP*SLTFQR Trigger: TCTCTGGAATGTCAGAGACCAAGGGAGTGTCCCTGT...GTCATTTGGGCAATGTTGTTGCTGGCAGGCTTCTAACCAGATCACAAGGTCCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086701.13 ENSMUST00000112729.3 ENSMUST00000112730.8 |
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| CDS-3UTR GCA 90 bp | AGGGACCTTGTGATCTGGTTAGAAGCCTGCCAGCAACAACATTGCCCAAATGACCTGTCCAATTTCATTTaGTGTGTCGCCTTTGGTGCC | + |
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Preference number: 4 (lower is better) Translates to: RDLVIWLEACQQQHCPNDLSNFI*CVAFGA Trigger: GGCACCAAAGGCGACACAGCAAATGAAATTGGACAG...GTCATTTGGGCAATGTTGTTGCTGGCAGGCTTCTAACCAGATCACAAGGTCCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086701.13 ENSMUST00000112729.3 ENSMUST00000112730.8 |
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| CDS-3UTR CCA 90 bp | AGGGACCTTGTGATCTGGTTAGAAGCCTGCCAGCAACAACATTGCCCAAATGACCCATGGTACTGGGGTTaGTCCACTGTAACAATGTTT | + |
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Preference number: 4 (lower is better) Translates to: RDLVIWLEACQQQHCPNDPWYWG*STVTMF Trigger: AAACATTGTTACAGTGGACCAACCCCAGTACCATGG...GTCATTTGGGCAATGTTGTTGCTGGCAGGCTTCTAACCAGATCACAAGGTCCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086701.13 ENSMUST00000112729.3 ENSMUST00000112730.8 |
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| CDS-3UTR TCA 90 bp | AGGGACCTTGTGATCTGGTTAGAAGCCTGCCAGCAACAACATTGCCCAAATGACATGGATGGTCAGCATTaGATTCATCCTTGTGCTGTA | + |
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Preference number: 4 (lower is better) Translates to: RDLVIWLEACQQQHCPNDMDGQH*IHPCAV Trigger: TACAGCACAAGGATGAATTCAATGCTGACCATCCAT...GTCATTTGGGCAATGTTGTTGCTGGCAGGCTTCTAACCAGATCACAAGGTCCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086701.13 ENSMUST00000112729.3 ENSMUST00000112730.8 |
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| CDS-3UTR CCA 90 bp | ACATTCTTTATCTCAGTAATGCAGAGCCCTGAGAATAATGTCCCCCACATCATCCTTTGGCATTGGCCATaGTACTGGGGTTGGTCCACT | + |
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Preference number: 4 (lower is better) Translates to: TFFISVMQSPENNVPHIILWHWP*YWGWST Trigger: AGTGGACCAACCCCAGTACCATGGCCAATGCCAAAG...GATGATGTGGGGGACATTATTCTCAGGGCTCTGCATTACTGAGATAAAGAATGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000086701.13 ENSMUST00000112729.3 ENSMUST00000112730.8 |
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| CDS-3UTR CCA 90 bp | AAAAGGTACTTGGTGAACCCTATACTCTTGTTCTTAAGAGTTGAAGGAAGTGGAACCCTGGCACCTCGATaGACTCACCACCATCTTCGG | + |
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Preference number: 4 (lower is better) Translates to: KRYLVNPILLFLRVEGSGTLAPR*THHHLR Trigger: CCGAAGATGGTGGTGAGTCCATCGAGGTGCCAGGGT...TCCACTTCCTTCAACTCTTAAGAACAAGAGTATAGGGTTCACCAAGTACCTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086701.13 ENSMUST00000112729.3 ENSMUST00000112730.8 |
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| CDS-3UTR TCA 90 bp | ACATTCTTTATCTCAGTAATGCAGAGCCCTGAGAATAATGTCCCCCACATCATCGTCAACAGCAAAAGCTaGATTTGCCAGTCTCAGGGC | + |
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Preference number: 4 (lower is better) Translates to: TFFISVMQSPENNVPHIIVNSKS*ICQSQG Trigger: GCCCTGAGACTGGCAAATTCAGCTTTTGCTGTTGAC...GATGATGTGGGGGACATTATTCTCAGGGCTCTGCATTACTGAGATAAAGAATGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000086701.13 ENSMUST00000112729.3 ENSMUST00000112730.8 |
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| CDS-3UTR TCA 90 bp | AGGGACCTTGTGATCTGGTTAGAAGCCTGCCAGCAACAACATTGCCCAAATGACATGGAGCTGTTAATTTaGCCTTTCGTTTCTTCCAGT | + |
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Preference number: 4 (lower is better) Translates to: RDLVIWLEACQQQHCPNDMELLI*PFVSSS Trigger: ACTGGAAGAAACGAAAGGTCAAATTAACAGCTCCAT...GTCATTTGGGCAATGTTGTTGCTGGCAGGCTTCTAACCAGATCACAAGGTCCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086701.13 ENSMUST00000112729.3 ENSMUST00000112730.8 |
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| CDS-3UTR CCA 90 bp | ACATTCTTTATCTCAGTAATGCAGAGCCCTGAGAATAATGTCCCCCACATCATCCATTGGCCATGGTACTaGGGTTGGTCCACTGTAACA | + |
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Preference number: 4 (lower is better) Translates to: TFFISVMQSPENNVPHIIHWPWY*GWSTVT Trigger: TGTTACAGTGGACCAACCCCAGTACCATGGCCAATG...GATGATGTGGGGGACATTATTCTCAGGGCTCTGCATTACTGAGATAAAGAATGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000086701.13 ENSMUST00000112729.3 ENSMUST00000112730.8 |
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| CDS-3UTR GCA 90 bp | AGGGACCTTGTGATCTGGTTAGAAGCCTGCCAGCAACAACATTGCCCAAATGACATGAGCATACTCAGATaGTTATTCTGGAAAGGAAGT | + |
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Preference number: 4 (lower is better) Translates to: RDLVIWLEACQQQHCPNDMSILR*LFWKGS Trigger: ACTTCCTTTCCAGAATAAGCATCTGAGTATGCTCAT...GTCATTTGGGCAATGTTGTTGCTGGCAGGCTTCTAACCAGATCACAAGGTCCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086701.13 ENSMUST00000112729.3 ENSMUST00000112730.8 |
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| CDS-3UTR CCA 90 bp | AGGGACCTTGTGATCTGGTTAGAAGCCTGCCAGCAACAACATTGCCCAAATGACACAAGGATTTTGGTCTaGTCACTTATACTGTTCTCT | + |
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Preference number: 4 (lower is better) Translates to: RDLVIWLEACQQQHCPNDTRILV*SLILFS Trigger: AGAGAACAGTATAAGTGACCAGACCAAAATCCTTGT...GTCATTTGGGCAATGTTGTTGCTGGCAGGCTTCTAACCAGATCACAAGGTCCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086701.13 ENSMUST00000112729.3 ENSMUST00000112730.8 |
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| CDS-3UTR CCA 90 bp | AAAAGGTACTTGGTGAACCCTATACTCTTGTTCTTAAGAGTTGAAGGAAGTGGACTTTGGCATTGGCCATaGTACTGGGGTTGGTCCACT | + |
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Preference number: 4 (lower is better) Translates to: KRYLVNPILLFLRVEGSGLWHWP*YWGWST Trigger: AGTGGACCAACCCCAGTACCATGGCCAATGCCAAAG...TCCACTTCCTTCAACTCTTAAGAACAAGAGTATAGGGTTCACCAAGTACCTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086701.13 ENSMUST00000112729.3 ENSMUST00000112730.8 |
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| CDS-3UTR TCA 90 bp | GTGGAGATCTCTAGAACATTCTTTATCTCAGTAATGCAGAGCCCTGAGAATAATGTCAACAGCAAAAGCTaGATTTGCCAGTCTCAGGGC | + |
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Preference number: 4 (lower is better) Translates to: VEISRTFFISVMQSPENNVNSKS*ICQSQG Trigger: GCCCTGAGACTGGCAAATTCAGCTTTTGCTGTTGAC...ATTATTCTCAGGGCTCTGCATTACTGAGATAAAGAATGTTCTAGAGATCTCCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086701.13 ENSMUST00000112729.3 ENSMUST00000112730.8 |
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| CDS-3UTR TCA 90 bp | AAAAGGTACTTGGTGAACCCTATACTCTTGTTCTTAAGAGTTGAAGGAAGTGGATTGGGAGGGAAAGTTTaGCTTTGGCATTGGCCATGG | + |
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Preference number: 4 (lower is better) Translates to: KRYLVNPILLFLRVEGSGLGGKV*LWHWPW Trigger: CCATGGCCAATGCCAAAGTCAAACTTTCCCTCCCAA...TCCACTTCCTTCAACTCTTAAGAACAAGAGTATAGGGTTCACCAAGTACCTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086701.13 ENSMUST00000112729.3 ENSMUST00000112730.8 |
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| CDS-3UTR TCA 90 bp | AAAAGGTACTTGGTGAACCCTATACTCTTGTTCTTAAGAGTTGAAGGAAGTGGACACTCCCTTGGTCTCTaGCATTCCAGAGAAATCCGA | + |
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Preference number: 4 (lower is better) Translates to: KRYLVNPILLFLRVEGSGHSLGL*HSREIR Trigger: TCGGATTTCTCTGGAATGTCAGAGACCAAGGGAGTG...TCCACTTCCTTCAACTCTTAAGAACAAGAGTATAGGGTTCACCAAGTACCTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086701.13 ENSMUST00000112729.3 ENSMUST00000112730.8 |
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| CDS-3UTR GCA 90 bp | ACATTCTTTATCTCAGTAATGCAGAGCCCTGAGAATAATGTCCCCCACATCATCGTTTCTGGGTTGAGTTaGTGTTCAATCTTCTCCAGG | + |
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Preference number: 4 (lower is better) Translates to: TFFISVMQSPENNVPHIIVSGLS*CSIFSR Trigger: CCTGGAGAAGATTGAACAGCAACTCAACCCAGAAAC...GATGATGTGGGGGACATTATTCTCAGGGCTCTGCATTACTGAGATAAAGAATGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000086701.13 ENSMUST00000112729.3 ENSMUST00000112730.8 |
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| CDS-3UTR CCA 90 bp | ACATTCTTTATCTCAGTAATGCAGAGCCCTGAGAATAATGTCCCCCACATCATCCCATGGTACTGGGGTTaGTCCACTGTAACAATGTTT | + |
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Preference number: 4 (lower is better) Translates to: TFFISVMQSPENNVPHIIPWYWG*STVTMF Trigger: AAACATTGTTACAGTGGACCAACCCCAGTACCATGG...GATGATGTGGGGGACATTATTCTCAGGGCTCTGCATTACTGAGATAAAGAATGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000086701.13 ENSMUST00000112729.3 ENSMUST00000112730.8 |
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| CDS-3UTR CCA 90 bp | AAAAGGTACTTGGTGAACCCTATACTCTTGTTCTTAAGAGTTGAAGGAAGTGGACATTGGCCATGGTACTaGGGTTGGTCCACTGTAACA | + |
|
Preference number: 4 (lower is better) Translates to: KRYLVNPILLFLRVEGSGHWPWY*GWSTVT Trigger: TGTTACAGTGGACCAACCCCAGTACCATGGCCAATG...TCCACTTCCTTCAACTCTTAAGAACAAGAGTATAGGGTTCACCAAGTACCTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086701.13 ENSMUST00000112729.3 ENSMUST00000112730.8 |
||
| CDS-3UTR TCA 90 bp | ACATTCTTTATCTCAGTAATGCAGAGCCCTGAGAATAATGTCCCCCACATCATCTCAGAAGTGACTGTTTaGAACCCAAAGGGTACATCT | + |
|
Preference number: 4 (lower is better) Translates to: TFFISVMQSPENNVPHIISEVTV*NPKGTS Trigger: AGATGTACCCTTTGGGTTTCAAACAGTCACTTCTGA...GATGATGTGGGGGACATTATTCTCAGGGCTCTGCATTACTGAGATAAAGAATGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000086701.13 ENSMUST00000112729.3 ENSMUST00000112730.8 |
||
| CDS-3UTR GCA 90 bp | AAAAGGTACTTGGTGAACCCTATACTCTTGTTCTTAAGAGTTGAAGGAAGTGGACTGTCCAATTTCATTTaGTGTGTCGCCTTTGGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: KRYLVNPILLFLRVEGSGLSNFI*CVAFGA Trigger: GGCACCAAAGGCGACACAGCAAATGAAATTGGACAG...TCCACTTCCTTCAACTCTTAAGAACAAGAGTATAGGGTTCACCAAGTACCTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086701.13 ENSMUST00000112729.3 ENSMUST00000112730.8 |
||
| CDS-3UTR TCA 90 bp | CAGAATTCTTTATCCAACACTCCAAGATCTAGAATGTTCTTCAAAGTGTTTCCATTGGGAGGGAAAGTTTaGCTTTGGCATTGGCCATGG | + |
|
Preference number: 4 (lower is better) Translates to: QNSLSNTPRSRMFFKVFPLGGKV*LWHWPW Trigger: CCATGGCCAATGCCAAAGTCAAACTTTCCCTCCCAA...TGGAAACACTTTGAAGAACATTCTAGATCTTGGAGTGTTGGATAAAGAATTCTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086701.13 ENSMUST00000112729.3 ENSMUST00000112730.8 |
||
| CDS-3UTR TCA 90 bp | CAGAATTCTTTATCCAACACTCCAAGATCTAGAATGTTCTTCAAAGTGTTTCCACACTCCCTTGGTCTCTaGCATTCCAGAGAAATCCGA | + |
|
Preference number: 4 (lower is better) Translates to: QNSLSNTPRSRMFFKVFPHSLGL*HSREIR Trigger: TCGGATTTCTCTGGAATGTCAGAGACCAAGGGAGTG...TGGAAACACTTTGAAGAACATTCTAGATCTTGGAGTGTTGGATAAAGAATTCTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086701.13 ENSMUST00000112729.3 ENSMUST00000112730.8 |
||
| CDS-3UTR GCA 90 bp | GTGGAGATCTCTAGAACATTCTTTATCTCAGTAATGCAGAGCCCTGAGAATAATGTTTCTGGGTTGAGTTaGTGTTCAATCTTCTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: VEISRTFFISVMQSPENNVSGLS*CSIFSR Trigger: CCTGGAGAAGATTGAACAGCAACTCAACCCAGAAAC...ATTATTCTCAGGGCTCTGCATTACTGAGATAAAGAATGTTCTAGAGATCTCCAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086701.13 ENSMUST00000112729.3 ENSMUST00000112730.8 |
||
| CDS-3UTR CCA 90 bp | ACATTCTTTATCTCAGTAATGCAGAGCCCTGAGAATAATGTCCCCCACATCATCAGTAGAGAGGCATATTaGAGAGAAGAGAATGTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: TFFISVMQSPENNVPHIISREAY*REENVS Trigger: GGAAACATTCTCTTCTCTCCAATATGCCTCTCTACT...GATGATGTGGGGGACATTATTCTCAGGGCTCTGCATTACTGAGATAAAGAATGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000086701.13 ENSMUST00000112729.3 ENSMUST00000112730.8 |
||
| CDS-3UTR CCA 90 bp | GTGGAGATCTCTAGAACATTCTTTATCTCAGTAATGCAGAGCCCTGAGAATAATCCATGGTACTGGGGTTaGTCCACTGTAACAATGTTT | + |
|
Preference number: 4 (lower is better) Translates to: VEISRTFFISVMQSPENNPWYWG*STVTMF Trigger: AAACATTGTTACAGTGGACCAACCCCAGTACCATGG...ATTATTCTCAGGGCTCTGCATTACTGAGATAAAGAATGTTCTAGAGATCTCCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086701.13 ENSMUST00000112729.3 ENSMUST00000112730.8 |
||
| CDS-3UTR CCA 90 bp | CAGAATTCTTTATCCAACACTCCAAGATCTAGAATGTTCTTCAAAGTGTTTCCAACAGGGACACTCCCTTaGTCTCTGACATTCCAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: QNSLSNTPRSRMFFKVFPTGTLP*SLTFQR Trigger: TCTCTGGAATGTCAGAGACCAAGGGAGTGTCCCTGT...TGGAAACACTTTGAAGAACATTCTAGATCTTGGAGTGTTGGATAAAGAATTCTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086701.13 ENSMUST00000112729.3 ENSMUST00000112730.8 |
||
| CDS-3UTR TCA 90 bp | AAAAGGTACTTGGTGAACCCTATACTCTTGTTCTTAAGAGTTGAAGGAAGTGGATCAGAAGTGACTGTTTaGAACCCAAAGGGTACATCT | + |
|
Preference number: 4 (lower is better) Translates to: KRYLVNPILLFLRVEGSGSEVTV*NPKGTS Trigger: AGATGTACCCTTTGGGTTTCAAACAGTCACTTCTGA...TCCACTTCCTTCAACTCTTAAGAACAAGAGTATAGGGTTCACCAAGTACCTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086701.13 ENSMUST00000112729.3 ENSMUST00000112730.8 |
||
| CDS-3UTR TCA 90 bp | GTGGAGATCTCTAGAACATTCTTTATCTCAGTAATGCAGAGCCCTGAGAATAATTCTAGGCATACTCTATaGATCACATTTGACAGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: VEISRTFFISVMQSPENNSRHTL*ITFDRD Trigger: GTCCCTGTCAAATGTGATTCATAGAGTATGCCTAGA...ATTATTCTCAGGGCTCTGCATTACTGAGATAAAGAATGTTCTAGAGATCTCCAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086701.13 ENSMUST00000112729.3 ENSMUST00000112730.8 |
||
| CDS-3UTR TCA 90 bp | AAAAGGTACTTGGTGAACCCTATACTCTTGTTCTTAAGAGTTGAAGGAAGTGGATCTAGGCATACTCTATaGATCACATTTGACAGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: KRYLVNPILLFLRVEGSGSRHTL*ITFDRD Trigger: GTCCCTGTCAAATGTGATTCATAGAGTATGCCTAGA...TCCACTTCCTTCAACTCTTAAGAACAAGAGTATAGGGTTCACCAAGTACCTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086701.13 ENSMUST00000112729.3 ENSMUST00000112730.8 |
||
| CDS-3UTR TCA 90 bp | AAAAGGTACTTGGTGAACCCTATACTCTTGTTCTTAAGAGTTGAAGGAAGTGGAATGGATGGTCAGCATTaGATTCATCCTTGTGCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: KRYLVNPILLFLRVEGSGMDGQH*IHPCAV Trigger: TACAGCACAAGGATGAATTCAATGCTGACCATCCAT...TCCACTTCCTTCAACTCTTAAGAACAAGAGTATAGGGTTCACCAAGTACCTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086701.13 ENSMUST00000112729.3 ENSMUST00000112730.8 |
||
| CDS-3UTR CCA 90 bp | GTGGAGATCTCTAGAACATTCTTTATCTCAGTAATGCAGAGCCCTGAGAATAATAGTAGAGAGGCATATTaGAGAGAAGAGAATGTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: VEISRTFFISVMQSPENNSREAY*REENVS Trigger: GGAAACATTCTCTTCTCTCCAATATGCCTCTCTACT...ATTATTCTCAGGGCTCTGCATTACTGAGATAAAGAATGTTCTAGAGATCTCCAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086701.13 ENSMUST00000112729.3 ENSMUST00000112730.8 |
||
| CDS-3UTR CCA 90 bp | AAAAGGTACTTGGTGAACCCTATACTCTTGTTCTTAAGAGTTGAAGGAAGTGGAAGTAGAGAGGCATATTaGAGAGAAGAGAATGTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: KRYLVNPILLFLRVEGSGSREAY*REENVS Trigger: GGAAACATTCTCTTCTCTCCAATATGCCTCTCTACT...TCCACTTCCTTCAACTCTTAAGAACAAGAGTATAGGGTTCACCAAGTACCTTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086701.13 ENSMUST00000112729.3 ENSMUST00000112730.8 |
||
| CDS-3UTR TCA 90 bp | CAGAATTCTTTATCCAACACTCCAAGATCTAGAATGTTCTTCAAAGTGTTTCCATCAGAAGTGACTGTTTaGAACCCAAAGGGTACATCT | + |
|
Preference number: 4 (lower is better) Translates to: QNSLSNTPRSRMFFKVFPSEVTV*NPKGTS Trigger: AGATGTACCCTTTGGGTTTCAAACAGTCACTTCTGA...TGGAAACACTTTGAAGAACATTCTAGATCTTGGAGTGTTGGATAAAGAATTCTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086701.13 ENSMUST00000112729.3 ENSMUST00000112730.8 |
||
| CDS-3UTR TCA 90 bp | AAAAGGTACTTGGTGAACCCTATACTCTTGTTCTTAAGAGTTGAAGGAAGTGGACTATGTAGAGTCGCTTaGCAAGTTTCAAAGAGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: KRYLVNPILLFLRVEGSGLCRVA*QVSKSK Trigger: TTTACTCTTTGAAACTTGTCAAGCGACTCTACATAG...TCCACTTCCTTCAACTCTTAAGAACAAGAGTATAGGGTTCACCAAGTACCTTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086701.13 ENSMUST00000112729.3 ENSMUST00000112730.8 |
||
| CDS-3UTR TCA 90 bp | AAAAGGTACTTGGTGAACCCTATACTCTTGTTCTTAAGAGTTGAAGGAAGTGGACTTCCAGTTTGTCTTTaGAGTCAACAGTTTCCAATT | + |
|
Preference number: 4 (lower is better) Translates to: KRYLVNPILLFLRVEGSGLPVCL*SQQFPI Trigger: AATTGGAAACTGTTGACTTCAAAGACAAACTGGAAG...TCCACTTCCTTCAACTCTTAAGAACAAGAGTATAGGGTTCACCAAGTACCTTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086701.13 ENSMUST00000112729.3 ENSMUST00000112730.8 |
||
| CDS-3UTR TCA 90 bp | GTGGAGATCTCTAGAACATTCTTTATCTCAGTAATGCAGAGCCCTGAGAATAATCTTCCAGTTTGTCTTTaGAGTCAACAGTTTCCAATT | + |
|
Preference number: 4 (lower is better) Translates to: VEISRTFFISVMQSPENNLPVCL*SQQFPI Trigger: AATTGGAAACTGTTGACTTCAAAGACAAACTGGAAG...ATTATTCTCAGGGCTCTGCATTACTGAGATAAAGAATGTTCTAGAGATCTCCAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086701.13 ENSMUST00000112729.3 ENSMUST00000112730.8 |
||
| CDS-3UTR TCA 90 bp | GTGGAGATCTCTAGAACATTCTTTATCTCAGTAATGCAGAGCCCTGAGAATAATACTTATACTGTTCTCTaGCAAAATGTCCTCAAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: VEISRTFFISVMQSPENNTYTVL*QNVLKV Trigger: CACTTTGAGGACATTTTGTCAGAGAACAGTATAAGT...ATTATTCTCAGGGCTCTGCATTACTGAGATAAAGAATGTTCTAGAGATCTCCAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086701.13 ENSMUST00000112729.3 ENSMUST00000112730.8 |
||
| CDS-3UTR TCA 90 bp | CAGAATTCTTTATCCAACACTCCAAGATCTAGAATGTTCTTCAAAGTGTTTCCATCTAGGCATACTCTATaGATCACATTTGACAGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: QNSLSNTPRSRMFFKVFPSRHTL*ITFDRD Trigger: GTCCCTGTCAAATGTGATTCATAGAGTATGCCTAGA...TGGAAACACTTTGAAGAACATTCTAGATCTTGGAGTGTTGGATAAAGAATTCTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086701.13 ENSMUST00000112729.3 ENSMUST00000112730.8 |
||
| CDS-3UTR GCA 90 bp | GTGGAGATCTCTAGAACATTCTTTATCTCAGTAATGCAGAGCCCTGAGAATAATATGAGCATACTCAGATaGTTATTCTGGAAAGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: VEISRTFFISVMQSPENNMSILR*LFWKGS Trigger: ACTTCCTTTCCAGAATAAGCATCTGAGTATGCTCAT...ATTATTCTCAGGGCTCTGCATTACTGAGATAAAGAATGTTCTAGAGATCTCCAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086701.13 ENSMUST00000112729.3 ENSMUST00000112730.8 |
||
| CDS-3UTR TCA 90 bp | CAGAATTCTTTATCCAACACTCCAAGATCTAGAATGTTCTTCAAAGTGTTTCCACTATGTAGAGTCGCTTaGCAAGTTTCAAAGAGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: QNSLSNTPRSRMFFKVFPLCRVA*QVSKSK Trigger: TTTACTCTTTGAAACTTGTCAAGCGACTCTACATAG...TGGAAACACTTTGAAGAACATTCTAGATCTTGGAGTGTTGGATAAAGAATTCTG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086701.13 ENSMUST00000112729.3 ENSMUST00000112730.8 |
||
| CDS-3UTR GCA 90 bp | CAGAATTCTTTATCCAACACTCCAAGATCTAGAATGTTCTTCAAAGTGTTTCCAATGAGCATACTCAGATaGTTATTCTGGAAAGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: QNSLSNTPRSRMFFKVFPMSILR*LFWKGS Trigger: ACTTCCTTTCCAGAATAAGCATCTGAGTATGCTCAT...TGGAAACACTTTGAAGAACATTCTAGATCTTGGAGTGTTGGATAAAGAATTCTG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086701.13 ENSMUST00000112729.3 ENSMUST00000112730.8 |
||
| CDS-3UTR CCA 90 bp | CAGAATTCTTTATCCAACACTCCAAGATCTAGAATGTTCTTCAAAGTGTTTCCAACAAGGATTTTGGTCTaGTCACTTATACTGTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: QNSLSNTPRSRMFFKVFPTRILV*SLILFS Trigger: AGAGAACAGTATAAGTGACCAGACCAAAATCCTTGT...TGGAAACACTTTGAAGAACATTCTAGATCTTGGAGTGTTGGATAAAGAATTCTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086701.13 ENSMUST00000112729.3 ENSMUST00000112730.8 |
||
| CDS TCA 90 bp | TGGCCATGGTACTGGGGTTGGTCCACTGTAACAATGTTTCTGGGTTaGGTTGCTGTTCAATCTTCTCCAGGCCTGTGGACTCATCCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: WPWYWGWSTVTMFLG*VAVQSSPGLWTHPP Trigger: TGGAGGATGAGTCCACAGGCCTGGAGAAGATTGAACAGCAACTCAACCCAGAAACATTGTTACAGTGGACCAACCCCAGTACCATGGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086701.13 ENSMUST00000112729.3 ENSMUST00000112730.8 |
||
| CDS GCA 90 bp | ATGGTACTGGGGTTGGTCCACTGTAACAATGTTTCTGGGTTGAGTTaGTGTTCAATCTTCTCCAGGCCTGTGGACTCATCCTCCACGTCC | + |
|
Preference number: 5 (lower is better) Translates to: MVLGLVHCNNVSGLS*CSIFSRPVDSSSTS Trigger: GGACGTGGAGGATGAGTCCACAGGCCTGGAGAAGATTGAACAGCAACTCAACCCAGAAACATTGTTACAGTGGACCAACCCCAGTACCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086701.13 ENSMUST00000112729.3 ENSMUST00000112730.8 |
||
| CDS-3UTR CAA 90 bp | AGGGACCTTGTGATCTGGTTAGAAGCCTGCCAGCAACAACATTGCCCAAATGACCCTGTCCAATTTCATTaGCTGTGTCGCCTTTGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: RDLVIWLEACQQQHCPNDPVQFH*LCRLWC Trigger: GCACCAAAGGCGACACAGCAAATGAAATTGGACAGG...GTCATTTGGGCAATGTTGTTGCTGGCAGGCTTCTAACCAGATCACAAGGTCCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086701.13 ENSMUST00000112729.3 ENSMUST00000112730.8 |
||
| CDS-3UTR CAA 90 bp | AGGGACCTTGTGATCTGGTTAGAAGCCTGCCAGCAACAACATTGCCCAAATGACGCCATGGTACTGGGGTaGGTCCACTGTAACAATGTT | + |
|
Preference number: 5 (lower is better) Translates to: RDLVIWLEACQQQHCPNDAMVLG*VHCNNV Trigger: AACATTGTTACAGTGGACCAACCCCAGTACCATGGC...GTCATTTGGGCAATGTTGTTGCTGGCAGGCTTCTAACCAGATCACAAGGTCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086701.13 ENSMUST00000112729.3 ENSMUST00000112730.8 |
||
| CDS-3UTR CAA 90 bp | AGGGACCTTGTGATCTGGTTAGAAGCCTGCCAGCAACAACATTGCCCAAATGACAGTTTGACTTTGGCATaGGCCATGGTACTGGGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: RDLVIWLEACQQQHCPNDSLTLA*AMVLGL Trigger: CAACCCCAGTACCATGGCCAATGCCAAAGTCAAACT...GTCATTTGGGCAATGTTGTTGCTGGCAGGCTTCTAACCAGATCACAAGGTCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086701.13 ENSMUST00000112729.3 ENSMUST00000112730.8 |
||
| CDS-3UTR CAA 90 bp | AGGGACCTTGTGATCTGGTTAGAAGCCTGCCAGCAACAACATTGCCCAAATGACAGGGAAAGTTTGACTTaGGCATTGGCCATGGTACTG | + |
|
Preference number: 5 (lower is better) Translates to: RDLVIWLEACQQQHCPNDRESLT*ALAMVL Trigger: CAGTACCATGGCCAATGCCAAAGTCAAACTTTCCCT...GTCATTTGGGCAATGTTGTTGCTGGCAGGCTTCTAACCAGATCACAAGGTCCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086701.13 ENSMUST00000112729.3 ENSMUST00000112730.8 |
||
| CDS-3UTR CAA 90 bp | AGGGACCTTGTGATCTGGTTAGAAGCCTGCCAGCAACAACATTGCCCAAATGACGCATTGAATTCATCCTaGTGCTGTAAGATCCGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: RDLVIWLEACQQQHCPNDALNSS*CCKIRD Trigger: GTCCCGGATCTTACAGCACAAGGATGAATTCAATGC...GTCATTTGGGCAATGTTGTTGCTGGCAGGCTTCTAACCAGATCACAAGGTCCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086701.13 ENSMUST00000112729.3 ENSMUST00000112730.8 |
||
| CDS-3UTR CAA 90 bp | AGGGACCTTGTGATCTGGTTAGAAGCCTGCCAGCAACAACATTGCCCAAATGACGGTTTGGTGTCTGTCTaGCTGATTCTGAAAGGACAT | + |
|
Preference number: 5 (lower is better) Translates to: RDLVIWLEACQQQHCPNDGLVSV*LILKGH Trigger: ATGTCCTTTCAGAATCAGCAAGACAGACACCAAACC...GTCATTTGGGCAATGTTGTTGCTGGCAGGCTTCTAACCAGATCACAAGGTCCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086701.13 ENSMUST00000112729.3 ENSMUST00000112730.8 |
||
| CDS-3UTR CAA 90 bp | AGGGACCTTGTGATCTGGTTAGAAGCCTGCCAGCAACAACATTGCCCAAATGACTGTTTCTGGGTTGAGTaGCTGTTCAATCTTCTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: RDLVIWLEACQQQHCPNDCFWVE*LFNLLQ Trigger: CTGGAGAAGATTGAACAGCAACTCAACCCAGAAACA...GTCATTTGGGCAATGTTGTTGCTGGCAGGCTTCTAACCAGATCACAAGGTCCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086701.13 ENSMUST00000112729.3 ENSMUST00000112730.8 |
||
| CDS-3UTR CAA 90 bp | AGGGACCTTGTGATCTGGTTAGAAGCCTGCCAGCAACAACATTGCCCAAATGACATCAGAAGTGACTGTTaGAAACCCAAAGGGTACATC | + |
|
Preference number: 5 (lower is better) Translates to: RDLVIWLEACQQQHCPNDIRSDC*KPKGYI Trigger: GATGTACCCTTTGGGTTTCAAACAGTCACTTCTGAT...GTCATTTGGGCAATGTTGTTGCTGGCAGGCTTCTAACCAGATCACAAGGTCCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086701.13 ENSMUST00000112729.3 ENSMUST00000112730.8 |
||
| CDS-3UTR CAA 90 bp | AGGGACCTTGTGATCTGGTTAGAAGCCTGCCAGCAACAACATTGCCCAAATGACCTTTCCAGACTAGCCTaGGGATCAATCATCTTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: RDLVIWLEACQQQHCPNDLSRLA*GSIIFS Trigger: AGAAAAGATGATTGATCCCAAGGCTAGTCTGGAAAG...GTCATTTGGGCAATGTTGTTGCTGGCAGGCTTCTAACCAGATCACAAGGTCCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086701.13 ENSMUST00000112729.3 ENSMUST00000112730.8 |
||
| CDS-3UTR CAA 90 bp | AGGGACCTTGTGATCTGGTTAGAAGCCTGCCAGCAACAACATTGCCCAAATGACAATGGATGGTCAGCATaGAATTCATCCTTGTGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: RDLVIWLEACQQQHCPNDNGWSA*NSSLCC Trigger: ACAGCACAAGGATGAATTCAATGCTGACCATCCATT...GTCATTTGGGCAATGTTGTTGCTGGCAGGCTTCTAACCAGATCACAAGGTCCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086701.13 ENSMUST00000112729.3 ENSMUST00000112730.8 |
||
| CDS GCA 90 bp | GACTCATCCTCCACGTCCTTGGGGAGCACAATGAGCATACTCAGATaGTTATTCTGGAAAGGAAGTTCTATGATCTTACAGCTGATGTCA | + |
|
Preference number: 5 (lower is better) Translates to: DSSSTSLGSTMSILR*LFWKGSSMILQLMS Trigger: TGACATCAGCTGTAAGATCATAGAACTTCCTTTCCAGAATAAGCATCTGAGTATGCTCATTGTGCTCCCCAAGGACGTGGAGGATGAGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086701.13 ENSMUST00000112729.3 ENSMUST00000112730.8 ENSMUST00000188745.3 |
||
| CDS-3UTR CAA 90 bp | AGGGACCTTGTGATCTGGTTAGAAGCCTGCCAGCAACAACATTGCCCAAATGACTCTTCCAGTTTGTCTTaGAAGTCAACAGTTTCCAAT | + |
|
Preference number: 5 (lower is better) Translates to: RDLVIWLEACQQQHCPNDSSSLS*KSTVSN Trigger: ATTGGAAACTGTTGACTTCAAAGACAAACTGGAAGA...GTCATTTGGGCAATGTTGTTGCTGGCAGGCTTCTAACCAGATCACAAGGTCCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086701.13 ENSMUST00000112729.3 ENSMUST00000112730.8 |
||
| CDS-3UTR CAA 90 bp | AGGGACCTTGTGATCTGGTTAGAAGCCTGCCAGCAACAACATTGCCCAAATGACTTCGTTTCTTCCAGTTaGTCTTTGAAGTCAACAGTT | + |
|
Preference number: 5 (lower is better) Translates to: RDLVIWLEACQQQHCPNDFVSSS*SLKSTV Trigger: AACTGTTGACTTCAAAGACAAACTGGAAGAAACGAA...GTCATTTGGGCAATGTTGTTGCTGGCAGGCTTCTAACCAGATCACAAGGTCCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086701.13 ENSMUST00000112729.3 ENSMUST00000112730.8 |
||
| CDS-3UTR CAA 90 bp | ACATTCTTTATCTCAGTAATGCAGAGCCCTGAGAATAATGTCCCCCACATCATCGCATTGAATTCATCCTaGTGCTGTAAGATCCGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: TFFISVMQSPENNVPHIIALNSS*CCKIRD Trigger: GTCCCGGATCTTACAGCACAAGGATGAATTCAATGC...GATGATGTGGGGGACATTATTCTCAGGGCTCTGCATTACTGAGATAAAGAATGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000086701.13 ENSMUST00000112729.3 ENSMUST00000112730.8 |
||
| CDS-3UTR CAA 90 bp | AAAAGGTACTTGGTGAACCCTATACTCTTGTTCTTAAGAGTTGAAGGAAGTGGACAGCAAAAGCTGAATTaGCCAGTCTCAGGGCATCCA | + |
|
Preference number: 5 (lower is better) Translates to: KRYLVNPILLFLRVEGSGQQKLN*PVSGHP Trigger: TGGATGCCCTGAGACTGGCAAATTCAGCTTTTGCTG...TCCACTTCCTTCAACTCTTAAGAACAAGAGTATAGGGTTCACCAAGTACCTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086701.13 ENSMUST00000112729.3 ENSMUST00000112730.8 |
||
| CDS-3UTR CAA 90 bp | ACATTCTTTATCTCAGTAATGCAGAGCCCTGAGAATAATGTCCCCCACATCATCGGTTTGGTGTCTGTCTaGCTGATTCTGAAAGGACAT | + |
|
Preference number: 5 (lower is better) Translates to: TFFISVMQSPENNVPHIIGLVSV*LILKGH Trigger: ATGTCCTTTCAGAATCAGCAAGACAGACACCAAACC...GATGATGTGGGGGACATTATTCTCAGGGCTCTGCATTACTGAGATAAAGAATGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000086701.13 ENSMUST00000112729.3 ENSMUST00000112730.8 |
||
| CDS-3UTR CAA 90 bp | GTGGAGATCTCTAGAACATTCTTTATCTCAGTAATGCAGAGCCCTGAGAATAATAGTTTGACTTTGGCATaGGCCATGGTACTGGGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: VEISRTFFISVMQSPENNSLTLA*AMVLGL Trigger: CAACCCCAGTACCATGGCCAATGCCAAAGTCAAACT...ATTATTCTCAGGGCTCTGCATTACTGAGATAAAGAATGTTCTAGAGATCTCCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086701.13 ENSMUST00000112729.3 ENSMUST00000112730.8 |
||
| CDS TCA 90 bp | AGCATTAACCACAAGGATTTTGGTCTGGTCACTTATACTGTTCTCTaGCAAAATGTCCTCAAAGTGGCCATCTGTGAGCTCCTTAATGGA | + |
|
Preference number: 5 (lower is better) Translates to: SINHKDFGLVTYTVL*QNVLKVAICELLNG Trigger: TCCATTAAGGAGCTCACAGATGGCCACTTTGAGGACATTTTGTCAGAGAACAGTATAAGTGACCAGACCAAAATCCTTGTGGTTAATGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086701.13 ENSMUST00000112729.3 ENSMUST00000112730.8 |
||
| CDS-3UTR CAA 90 bp | ACATTCTTTATCTCAGTAATGCAGAGCCCTGAGAATAATGTCCCCCACATCATCCTCAAGATTCATCATTaGTACGGGTTTGGTGTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: TFFISVMQSPENNVPHIILKIHH*YGFGVC Trigger: ACAGACACCAAACCCGTACAAATGATGAATCTTGAG...GATGATGTGGGGGACATTATTCTCAGGGCTCTGCATTACTGAGATAAAGAATGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000086701.13 ENSMUST00000112729.3 ENSMUST00000112730.8 |
||
| CDS-3UTR CAA 90 bp | GTGGAGATCTCTAGAACATTCTTTATCTCAGTAATGCAGAGCCCTGAGAATAATAGGGAAAGTTTGACTTaGGCATTGGCCATGGTACTG | + |
|
Preference number: 5 (lower is better) Translates to: VEISRTFFISVMQSPENNRESLT*ALAMVL Trigger: CAGTACCATGGCCAATGCCAAAGTCAAACTTTCCCT...ATTATTCTCAGGGCTCTGCATTACTGAGATAAAGAATGTTCTAGAGATCTCCAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086701.13 ENSMUST00000112729.3 ENSMUST00000112730.8 |
||
| CDS-3UTR CAA 90 bp | ACATTCTTTATCTCAGTAATGCAGAGCCCTGAGAATAATGTCCCCCACATCATCCTTTCCAGACTAGCCTaGGGATCAATCATCTTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: TFFISVMQSPENNVPHIILSRLA*GSIIFS Trigger: AGAAAAGATGATTGATCCCAAGGCTAGTCTGGAAAG...GATGATGTGGGGGACATTATTCTCAGGGCTCTGCATTACTGAGATAAAGAATGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000086701.13 ENSMUST00000112729.3 ENSMUST00000112730.8 |
||
| CDS-3UTR CAA 90 bp | GTGGAGATCTCTAGAACATTCTTTATCTCAGTAATGCAGAGCCCTGAGAATAATGCATTGAATTCATCCTaGTGCTGTAAGATCCGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: VEISRTFFISVMQSPENNALNSS*CCKIRD Trigger: GTCCCGGATCTTACAGCACAAGGATGAATTCAATGC...ATTATTCTCAGGGCTCTGCATTACTGAGATAAAGAATGTTCTAGAGATCTCCAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086701.13 ENSMUST00000112729.3 ENSMUST00000112730.8 |
||
| CDS-3UTR CAA 90 bp | CAGAATTCTTTATCCAACACTCCAAGATCTAGAATGTTCTTCAAAGTGTTTCCACCTGTCCAATTTCATTaGCTGTGTCGCCTTTGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: QNSLSNTPRSRMFFKVFPPVQFH*LCRLWC Trigger: GCACCAAAGGCGACACAGCAAATGAAATTGGACAGG...TGGAAACACTTTGAAGAACATTCTAGATCTTGGAGTGTTGGATAAAGAATTCTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086701.13 ENSMUST00000112729.3 ENSMUST00000112730.8 |
||
| CDS-3UTR CAA 90 bp | ACATTCTTTATCTCAGTAATGCAGAGCCCTGAGAATAATGTCCCCCACATCATCTTAACCACAAGGATTTaGGTCTGGTCACTTATACTG | + |
|
Preference number: 5 (lower is better) Translates to: TFFISVMQSPENNVPHIILTTRI*VWSLIL Trigger: CAGTATAAGTGACCAGACCAAAATCCTTGTGGTTAA...GATGATGTGGGGGACATTATTCTCAGGGCTCTGCATTACTGAGATAAAGAATGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000086701.13 ENSMUST00000112729.3 ENSMUST00000112730.8 |
||
| CDS-3UTR CAA 90 bp | ACATTCTTTATCTCAGTAATGCAGAGCCCTGAGAATAATGTCCCCCACATCATCAACAATGTTTCTGGGTaGAGTTGCTGTTCAATCTTC | + |
|
Preference number: 5 (lower is better) Translates to: TFFISVMQSPENNVPHIINNVSG*SCCSIF Trigger: GAAGATTGAACAGCAACTCAACCCAGAAACATTGTT...GATGATGTGGGGGACATTATTCTCAGGGCTCTGCATTACTGAGATAAAGAATGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000086701.13 ENSMUST00000112729.3 ENSMUST00000112730.8 |
||
| CDS-3UTR CAA 90 bp | CAGAATTCTTTATCCAACACTCCAAGATCTAGAATGTTCTTCAAAGTGTTTCCAGCCATGGTACTGGGGTaGGTCCACTGTAACAATGTT | + |
|
Preference number: 5 (lower is better) Translates to: QNSLSNTPRSRMFFKVFPAMVLG*VHCNNV Trigger: AACATTGTTACAGTGGACCAACCCCAGTACCATGGC...TGGAAACACTTTGAAGAACATTCTAGATCTTGGAGTGTTGGATAAAGAATTCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086701.13 ENSMUST00000112729.3 ENSMUST00000112730.8 |
||
| CDS-3UTR CAA 90 bp | CAGAATTCTTTATCCAACACTCCAAGATCTAGAATGTTCTTCAAAGTGTTTCCAAGTTTGACTTTGGCATaGGCCATGGTACTGGGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: QNSLSNTPRSRMFFKVFPSLTLA*AMVLGL Trigger: CAACCCCAGTACCATGGCCAATGCCAAAGTCAAACT...TGGAAACACTTTGAAGAACATTCTAGATCTTGGAGTGTTGGATAAAGAATTCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086701.13 ENSMUST00000112729.3 ENSMUST00000112730.8 |
||
| CDS-3UTR CAA 90 bp | ACATTCTTTATCTCAGTAATGCAGAGCCCTGAGAATAATGTCCCCCACATCATCTCTTCCAGTTTGTCTTaGAAGTCAACAGTTTCCAAT | + |
|
Preference number: 5 (lower is better) Translates to: TFFISVMQSPENNVPHIISSSLS*KSTVSN Trigger: ATTGGAAACTGTTGACTTCAAAGACAAACTGGAAGA...GATGATGTGGGGGACATTATTCTCAGGGCTCTGCATTACTGAGATAAAGAATGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000086701.13 ENSMUST00000112729.3 ENSMUST00000112730.8 |
||
| CDS-3UTR CAA 90 bp | ACATTCTTTATCTCAGTAATGCAGAGCCCTGAGAATAATGTCCCCCACATCATCTTCGTTTCTTCCAGTTaGTCTTTGAAGTCAACAGTT | + |
|
Preference number: 5 (lower is better) Translates to: TFFISVMQSPENNVPHIIFVSSS*SLKSTV Trigger: AACTGTTGACTTCAAAGACAAACTGGAAGAAACGAA...GATGATGTGGGGGACATTATTCTCAGGGCTCTGCATTACTGAGATAAAGAATGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000086701.13 ENSMUST00000112729.3 ENSMUST00000112730.8 |
||
| CDS-3UTR CAA 90 bp | AAAAGGTACTTGGTGAACCCTATACTCTTGTTCTTAAGAGTTGAAGGAAGTGGACTCAAGATTCATCATTaGTACGGGTTTGGTGTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: KRYLVNPILLFLRVEGSGLKIHH*YGFGVC Trigger: ACAGACACCAAACCCGTACAAATGATGAATCTTGAG...TCCACTTCCTTCAACTCTTAAGAACAAGAGTATAGGGTTCACCAAGTACCTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086701.13 ENSMUST00000112729.3 ENSMUST00000112730.8 |
||
| CDS-3UTR CAA 90 bp | CAGAATTCTTTATCCAACACTCCAAGATCTAGAATGTTCTTCAAAGTGTTTCCAAGGGAAAGTTTGACTTaGGCATTGGCCATGGTACTG | + |
|
Preference number: 5 (lower is better) Translates to: QNSLSNTPRSRMFFKVFPRESLT*ALAMVL Trigger: CAGTACCATGGCCAATGCCAAAGTCAAACTTTCCCT...TGGAAACACTTTGAAGAACATTCTAGATCTTGGAGTGTTGGATAAAGAATTCTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086701.13 ENSMUST00000112729.3 ENSMUST00000112730.8 |
||
| CDS-3UTR CAA 90 bp | AAAAGGTACTTGGTGAACCCTATACTCTTGTTCTTAAGAGTTGAAGGAAGTGGACTTTCCAGACTAGCCTaGGGATCAATCATCTTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: KRYLVNPILLFLRVEGSGLSRLA*GSIIFS Trigger: AGAAAAGATGATTGATCCCAAGGCTAGTCTGGAAAG...TCCACTTCCTTCAACTCTTAAGAACAAGAGTATAGGGTTCACCAAGTACCTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086701.13 ENSMUST00000112729.3 ENSMUST00000112730.8 |
||
| CDS-3UTR CAA 90 bp | GTGGAGATCTCTAGAACATTCTTTATCTCAGTAATGCAGAGCCCTGAGAATAATTCCGATGTACTTTCATaGAAGAGACTTTTCAGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: VEISRTFFISVMQSPENNSDVLS*KRLFSP Trigger: AGGGCTGAAAAGTCTCTTCAATGAAAGTACATCGGA...ATTATTCTCAGGGCTCTGCATTACTGAGATAAAGAATGTTCTAGAGATCTCCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086701.13 ENSMUST00000112729.3 ENSMUST00000112730.8 |
||
| CDS-3UTR CAA 90 bp | GTGGAGATCTCTAGAACATTCTTTATCTCAGTAATGCAGAGCCCTGAGAATAATAATGGATGGTCAGCATaGAATTCATCCTTGTGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: VEISRTFFISVMQSPENNNGWSA*NSSLCC Trigger: ACAGCACAAGGATGAATTCAATGCTGACCATCCATT...ATTATTCTCAGGGCTCTGCATTACTGAGATAAAGAATGTTCTAGAGATCTCCAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086701.13 ENSMUST00000112729.3 ENSMUST00000112730.8 |
||
| CDS-3UTR CAA 90 bp | CAGAATTCTTTATCCAACACTCCAAGATCTAGAATGTTCTTCAAAGTGTTTCCATGTTTCTGGGTTGAGTaGCTGTTCAATCTTCTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: QNSLSNTPRSRMFFKVFPCFWVE*LFNLLQ Trigger: CTGGAGAAGATTGAACAGCAACTCAACCCAGAAACA...TGGAAACACTTTGAAGAACATTCTAGATCTTGGAGTGTTGGATAAAGAATTCTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086701.13 ENSMUST00000112729.3 ENSMUST00000112730.8 |
||
| CDS-3UTR CAA 90 bp | CAGAATTCTTTATCCAACACTCCAAGATCTAGAATGTTCTTCAAAGTGTTTCCAATCAGAAGTGACTGTTaGAAACCCAAAGGGTACATC | + |
|
Preference number: 5 (lower is better) Translates to: QNSLSNTPRSRMFFKVFPIRSDC*KPKGYI Trigger: GATGTACCCTTTGGGTTTCAAACAGTCACTTCTGAT...TGGAAACACTTTGAAGAACATTCTAGATCTTGGAGTGTTGGATAAAGAATTCTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086701.13 ENSMUST00000112729.3 ENSMUST00000112730.8 |
||
| CDS-3UTR CAA 90 bp | CAGAATTCTTTATCCAACACTCCAAGATCTAGAATGTTCTTCAAAGTGTTTCCATCCGATGTACTTTCATaGAAGAGACTTTTCAGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: QNSLSNTPRSRMFFKVFPSDVLS*KRLFSP Trigger: AGGGCTGAAAAGTCTCTTCAATGAAAGTACATCGGA...TGGAAACACTTTGAAGAACATTCTAGATCTTGGAGTGTTGGATAAAGAATTCTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086701.13 ENSMUST00000112729.3 ENSMUST00000112730.8 |
||
| CDS-3UTR CAA 90 bp | CAGAATTCTTTATCCAACACTCCAAGATCTAGAATGTTCTTCAAAGTGTTTCCATTAACCACAAGGATTTaGGTCTGGTCACTTATACTG | + |
|
Preference number: 5 (lower is better) Translates to: QNSLSNTPRSRMFFKVFPLTTRI*VWSLIL Trigger: CAGTATAAGTGACCAGACCAAAATCCTTGTGGTTAA...TGGAAACACTTTGAAGAACATTCTAGATCTTGGAGTGTTGGATAAAGAATTCTG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086701.13 ENSMUST00000112729.3 ENSMUST00000112730.8 |
||
| CDS-3UTR CAA 90 bp | CAGAATTCTTTATCCAACACTCCAAGATCTAGAATGTTCTTCAAAGTGTTTCCAAACAATGTTTCTGGGTaGAGTTGCTGTTCAATCTTC | + |
|
Preference number: 5 (lower is better) Translates to: QNSLSNTPRSRMFFKVFPNNVSG*SCCSIF Trigger: GAAGATTGAACAGCAACTCAACCCAGAAACATTGTT...TGGAAACACTTTGAAGAACATTCTAGATCTTGGAGTGTTGGATAAAGAATTCTG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086701.13 ENSMUST00000112729.3 ENSMUST00000112730.8 |
||
| CDS CCA 90 bp | TTCCAGTTTGTCTTTGAAGTCAACAGTTTCCAATTCTTTTGCATATaGTCTTTTGGTAGAACTGATAAATTCTGTAGAAGGGTTCAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: FQFVFEVNSFQFFCI*SFGRTDKFCRRVQR Trigger: TCTCTGAACCCTTCTACAGAATTTATCAGTTCTACCAAAAGACCATATGCAAAAGAATTGGAAACTGTTGACTTCAAAGACAAACTGGAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086701.13 ENSMUST00000112729.3 ENSMUST00000112730.8 |
||
| CDS CCA 72 bp | CCTTGTGCTGTAAGATCCGGGACCCTGGCACCTCGATaGACTCACCACCATCTTCGGTTATTTCTAGGCATA | + |
|
Preference number: 6 (lower is better) Translates to: PCAVRSGTLAPR*THHHLRLFLGI Trigger: TATGCCTAGAAATAACCGAAGATGGTGGTGAGTCCATCGAGGTGCCAGGGTCCCGGATCTTACAGCACAAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086701.13 ENSMUST00000112729.3 ENSMUST00000112730.8 |
||
| CDS CAA 72 bp | ATCTTCTCCAGGCCTGTGGACTCATCCTCCACGTCCTaGGGGAGCACAATGAGCATACTCAGATGCTTATTC | + |
|
Preference number: 6 (lower is better) Translates to: IFSRPVDSSSTS*GSTMSILRCLF Trigger: GAATAAGCATCTGAGTATGCTCATTGTGCTCCCCAAGGACGTGGAGGATGAGTCCACAGGCCTGGAGAAGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086701.13 ENSMUST00000112729.3 ENSMUST00000112730.8 |
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| CDS CAA 90 bp | AAGGACCTGTCCAATTTCATTTGCTGTGTCGCCTTTGGTGCCCACTaGCGCAAGGGACAGAGAAGTAGAGAGGCATATTGGAGAGAAGAG | + |
|
Preference number: 6 (lower is better) Translates to: KDLSNFICCVAFGAH*RKGQRSREAYWREE Trigger: CTCTTCTCTCCAATATGCCTCTCTACTTCTCTGTCCCTTGCGCAAGTGGGCACCAAAGGCGACACAGCAAATGAAATTGGACAGGTCCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086701.13 ENSMUST00000112729.3 ENSMUST00000112730.8 |
||
| CDS GCA 72 bp | GGGTTGGTCCACTGTAACAATGTTTCTGGGTTGAGTTaGTGTTCAATCTTCTCCAGGCCTGTGGACTCATCC | + |
|
Preference number: 6 (lower is better) Translates to: GLVHCNNVSGLS*CSIFSRPVDSS Trigger: GGATGAGTCCACAGGCCTGGAGAAGATTGAACAGCAACTCAACCCAGAAACATTGTTACAGTGGACCAACCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086701.13 ENSMUST00000112729.3 ENSMUST00000112730.8 |
||
| CDS CAA 72 bp | TCCAATTTCATTTGCTGTGTCGCCTTTGGTGCCCACTaGCGCAAGGGACAGAGAAGTAGAGAGGCATATTGG | + |
|
Preference number: 6 (lower is better) Translates to: SNFICCVAFGAH*RKGQRSREAYW Trigger: CCAATATGCCTCTCTACTTCTCTGTCCCTTGCGCAAGTGGGCACCAAAGGCGACACAGCAAATGAAATTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086701.13 ENSMUST00000112729.3 ENSMUST00000112730.8 |
||
| CDS CAA 72 bp | GTACTGGGGTTGGTCCACTGTAACAATGTTTCTGGGTaGAGTTGCTGTTCAATCTTCTCCAGGCCTGTGGAC | + |
|
Preference number: 6 (lower is better) Translates to: VLGLVHCNNVSG*SCCSIFSRPVD Trigger: GTCCACAGGCCTGGAGAAGATTGAACAGCAACTCAACCCAGAAACATTGTTACAGTGGACCAACCCCAGTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086701.13 ENSMUST00000112729.3 ENSMUST00000112730.8 |
||
| CDS TCA 72 bp | CTGTGGACTCATCCTCCACGTCCTTGGGGAGCACAATaGGCATACTCAGATGCTTATTCTGGAAAGGAAGTT | + |
|
Preference number: 6 (lower is better) Translates to: LWTHPPRPWGAQ*AYSDAYSGKEV Trigger: AACTTCCTTTCCAGAATAAGCATCTGAGTATGCTCATTGTGCTCCCCAAGGACGTGGAGGATGAGTCCACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086701.13 ENSMUST00000112729.3 ENSMUST00000112730.8 ENSMUST00000188745.3 |
||
| CDS TCA 72 bp | TACTGGGGTTGGTCCACTGTAACAATGTTTCTGGGTTaGGTTGCTGTTCAATCTTCTCCAGGCCTGTGGACT | + |
|
Preference number: 6 (lower is better) Translates to: YWGWSTVTMFLG*VAVQSSPGLWT Trigger: AGTCCACAGGCCTGGAGAAGATTGAACAGCAACTCAACCCAGAAACATTGTTACAGTGGACCAACCCCAGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086701.13 ENSMUST00000112729.3 ENSMUST00000112730.8 |
||
| CDS GCA 72 bp | GACATTCTCAAAATGAAGGACCTGTCCAATTTCATTTaGTGTGTCGCCTTTGGTGCCCACTTGCGCAAGGGA | + |
|
Preference number: 6 (lower is better) Translates to: DILKMKDLSNFI*CVAFGAHLRKG Trigger: TCCCTTGCGCAAGTGGGCACCAAAGGCGACACAGCAAATGAAATTGGACAGGTCCTTCATTTTGAGAATGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086701.13 ENSMUST00000112729.3 ENSMUST00000112730.8 |
||
| CDS CAA 90 bp | ACTCCCTTGGTCTCTGACATTCCAGAGAAATCCGATGTACTTTCATaGAAGAGACTTTTCAGCCCTAGGCTTTCCAGACTAGCCTTGGGA | + |
|
Preference number: 6 (lower is better) Translates to: TPLVSDIPEKSDVLS*KRLFSPRLSRLALG Trigger: TCCCAAGGCTAGTCTGGAAAGCCTAGGGCTGAAAAGTCTCTTCAATGAAAGTACATCGGATTTCTCTGGAATGTCAGAGACCAAGGGAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086701.13 ENSMUST00000112729.3 ENSMUST00000112730.8 |
||
| CDS CAA 90 bp | CACCACCATCTTCGGTTATTTCTAGGCATACTCTATGAATCACATTaGACAGGGACACTCCCTTGGTCTCTGACATTCCAGAGAAATCCG | + |
|
Preference number: 6 (lower is better) Translates to: HHHLRLFLGILYESH*TGTLPWSLTFQRNP Trigger: CGGATTTCTCTGGAATGTCAGAGACCAAGGGAGTGTCCCTGTCAAATGTGATTCATAGAGTATGCCTAGAAATAACCGAAGATGGTGGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086701.13 ENSMUST00000112729.3 ENSMUST00000112730.8 |
||
| CDS CAA 72 bp | ACCTTAAACTTTGGGAGGGAAAGTTTGACTTTGGCATaGGCCATGGTACTGGGGTTGGTCCACTGTAACAAT | + |
|
Preference number: 6 (lower is better) Translates to: TLNFGRESLTLA*AMVLGLVHCNN Trigger: ATTGTTACAGTGGACCAACCCCAGTACCATGGCCAATGCCAAAGTCAAACTTTCCCTCCCAAAGTTTAAGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086701.13 ENSMUST00000112729.3 ENSMUST00000112730.8 |
||
| CDS CAA 72 bp | TTTTCTACCTTAAACTTTGGGAGGGAAAGTTTGACTTaGGCATTGGCCATGGTACTGGGGTTGGTCCACTGT | + |
|
Preference number: 6 (lower is better) Translates to: FSTLNFGRESLT*ALAMVLGLVHC Trigger: ACAGTGGACCAACCCCAGTACCATGGCCAATGCCAAAGTCAAACTTTCCCTCCCAAAGTTTAAGGTAGAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086701.13 ENSMUST00000112729.3 ENSMUST00000112730.8 |
||
| CDS CAA 90 bp | ATCTTTTCTACCTTAAACTTTGGGAGGGAAAGTTTGACTTTGGCATaGGCCATGGTACTGGGGTTGGTCCACTGTAACAATGTTTCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: IFSTLNFGRESLTLA*AMVLGLVHCNNVSG Trigger: CCCAGAAACATTGTTACAGTGGACCAACCCCAGTACCATGGCCAATGCCAAAGTCAAACTTTCCCTCCCAAAGTTTAAGGTAGAAAAGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086701.13 ENSMUST00000112729.3 ENSMUST00000112730.8 |
||
| CDS GCA 72 bp | TCCACGTCCTTGGGGAGCACAATGAGCATACTCAGATaGTTATTCTGGAAAGGAAGTTCTATGATCTTACAG | + |
|
Preference number: 6 (lower is better) Translates to: STSLGSTMSILR*LFWKGSSMILQ Trigger: CTGTAAGATCATAGAACTTCCTTTCCAGAATAAGCATCTGAGTATGCTCATTGTGCTCCCCAAGGACGTGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086701.13 ENSMUST00000112729.3 ENSMUST00000112730.8 ENSMUST00000188745.3 |
||
| CDS CAA 72 bp | GTTACCCAAGCAGAAAGTGGCCTCAAGATTCATCATTaGTACGGGTTTGGTGTCTGTCTTGCTGATTCTGAA | + |
|
Preference number: 6 (lower is better) Translates to: VTQAESGLKIHH*YGFGVCLADSE Trigger: TTCAGAATCAGCAAGACAGACACCAAACCCGTACAAATGATGAATCTTGAGGCCACTTTCTGCTTGGGTAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000086701.13 ENSMUST00000112729.3 ENSMUST00000112730.8 ENSMUST00000188745.3 |
||
| CDS CAA 72 bp | CTTCGGTTATTTCTAGGCATACTCTATGAATCACATTaGACAGGGACACTCCCTTGGTCTCTGACATTCCAG | + |
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Preference number: 6 (lower is better) Translates to: LRLFLGILYESH*TGTLPWSLTFQ Trigger: CTGGAATGTCAGAGACCAAGGGAGTGTCCCTGTCAAATGTGATTCATAGAGTATGCCTAGAAATAACCGAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086701.13 ENSMUST00000112729.3 ENSMUST00000112730.8 |
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| CDS CAA 90 bp | GTCATCAATGTTACCCAAGCAGAAAGTGGCCTCAAGATTCATCATTaGTACGGGTTTGGTGTCTGTCTTGCTGATTCTGAAAGGACATTC | + |
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Preference number: 6 (lower is better) Translates to: VINVTQAESGLKIHH*YGFGVCLADSERTF Trigger: GAATGTCCTTTCAGAATCAGCAAGACAGACACCAAACCCGTACAAATGATGAATCTTGAGGCCACTTTCTGCTTGGGTAACATTGATGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000086701.13 ENSMUST00000112729.3 ENSMUST00000112730.8 ENSMUST00000188745.3 |
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| CDS CAA 72 bp | CAGAAAGTGGCCTCAAGATTCATCATTTGTACGGGTTaGGTGTCTGTCTTGCTGATTCTGAAAGGACATTCT | + |
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Preference number: 6 (lower is better) Translates to: QKVASRFIICTG*VSVLLILKGHS Trigger: AGAATGTCCTTTCAGAATCAGCAAGACAGACACCAAACCCGTACAAATGATGAATCTTGAGGCCACTTTCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000086701.13 ENSMUST00000112729.3 ENSMUST00000112730.8 ENSMUST00000188745.3 |
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| CDS TCA 72 bp | TGGCCATCTGTGAGCTCCTTAATGGAGCTGTTAATTTaGCCTTTCGTTTCTTCCAGTTTGTCTTTGAAGTCA | + |
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Preference number: 6 (lower is better) Translates to: WPSVSSLMELLI*PFVSSSLSLKS Trigger: TGACTTCAAAGACAAACTGGAAGAAACGAAAGGTCAAATTAACAGCTCCATTAAGGAGCTCACAGATGGCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086701.13 ENSMUST00000112729.3 ENSMUST00000112730.8 |
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| CDS CCA 72 bp | GTCTTTGAAGTCAACAGTTTCCAATTCTTTTGCATATaGTCTTTTGGTAGAACTGATAAATTCTGTAGAAGG | + |
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Preference number: 6 (lower is better) Translates to: VFEVNSFQFFCI*SFGRTDKFCRR Trigger: CCTTCTACAGAATTTATCAGTTCTACCAAAAGACCATATGCAAAAGAATTGGAAACTGTTGACTTCAAAGAC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086701.13 ENSMUST00000112729.3 ENSMUST00000112730.8 |
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| CDS CAA 72 bp | AAGTCAACAGTTTCCAATTCTTTTGCATATGGTCTTTaGGTAGAACTGATAAATTCTGTAGAAGGGTTCAGA | + |
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Preference number: 6 (lower is better) Translates to: KSTVSNSFAYGL*VELINSVEGFR Trigger: TCTGAACCCTTCTACAGAATTTATCAGTTCTACCAAAAGACCATATGCAAAAGAATTGGAAACTGTTGACTT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086701.13 ENSMUST00000112729.3 ENSMUST00000112730.8 |
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